pycom15g00760

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
417901 .. 418248
348 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 348 bp
ATGACCACATTATTATTGAGATTTTTTCTGTTTGTTTGTTGTGGTCTGGTGATTTTGGGAAACCAAGCGGTTGGAGGTGATGTCGTTAAGCTGCCGCCCAATGCAACGATTCCCGCTGTGTTTATGTTTGGCGATTCCATCGTCGATACAGGGAACAATAACGTCAACCTGAAGACGCCAGCTCGGTGCAATTTCCCTCCGTACGGCAGGGAGTTCGAAGGAGGAATATCTACTGGAAGATATTCCAATGGAAAGGTTCCCTCTGACCTCATAGGTTGTGCTTCTGCTTGTGCTTTTGCTGTGTTTGACTCTCACTCTCTCACTCTCACGATACATGACACTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

116

Amino Acids

12.2

Weight (kDa)

6.0

Isoelectric Point (pI)

19.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 68, 95, 114
AcuI CTGAAG 1 cut(s) 191
AcyI GRCGYC 1 cut(s) 176
AfaI GTAC 1 cut(s) 203
AfiI CCNNNNNNNGG 1 cut(s) 203
AluBI AGCT 2 cut(s) 91, 182
AluI AGCT 2 cut(s) 91, 182
ApeKI GCWGC 1 cut(s) 91
Asp700I GAANNNNTTC 1 cut(s) 241
AsuHPI GGTGA 2 cut(s) 61, 89
AsuII TTCGAA 1 cut(s) 216
BbsI GAAGAC 1 cut(s) 179
BbvI GCAGC 1 cut(s) 78
BccI CCATC 1 cut(s) 146
BceAI ACGGC 1 cut(s) 220
BcgI CGANNNNNNTGC 2 cut(s) 196, 230
BisI GCNGC 2 cut(s) 92, 95
BlsI GCNGC 2 cut(s) 93, 96
BmiI GGNNCC 1 cut(s) 258
BpiI GAAGAC 1 cut(s) 179
Bpu14I TTCGAA 1 cut(s) 216
BsaHI GRCGYC 1 cut(s) 176
BsaXI ACNNNNNCTCC 2 cut(s) 66, 96
Bsc4I CCNNNNNNNGG 1 cut(s) 203
Bse1I ACTGG 1 cut(s) 238
BseLI CCNNNNNNNGG 1 cut(s) 203
BseNI ACTGG 1 cut(s) 238
BseXI GCAGC 1 cut(s) 78
BsiWI CGTACG 1 cut(s) 201
BslI CCNNNNNNNGG 1 cut(s) 203
Bsp119I TTCGAA 1 cut(s) 216
BspACI CCGC 3 cut(s) 68, 95, 114
BspLI GGNNCC 1 cut(s) 258
BspT104I TTCGAA 1 cut(s) 216
BsrI ACTGG 1 cut(s) 238
BssNI GRCGYC 1 cut(s) 176
BstACI GRCGYC 1 cut(s) 176
BstBI TTCGAA 1 cut(s) 216
BstC8I GCNNGC 1 cut(s) 180
BstV1I GCAGC 1 cut(s) 78
BstV2I GAAGAC 1 cut(s) 179
BstXI CCANNNNNNTGG 1 cut(s) 71
Cac8I GCNNGC 1 cut(s) 180
CseI GACGC 1 cut(s) 184
Csp6I GTAC 1 cut(s) 202
CviAII CATG 1 cut(s) 335
CviJI RGCY 2 cut(s) 91, 182
CviKI_1 RGCY 2 cut(s) 91, 182
CviQI GTAC 1 cut(s) 202
Eco57I CTGAAG 1 cut(s) 191
FaeI CATG 1 cut(s) 338
FaiI YATR 3 cut(s) 125, 272, 336
FatI CATG 1 cut(s) 334
FauI CCCGC 1 cut(s) 121
Fnu4HI GCNGC 2 cut(s) 92, 95
Fsp4HI GCNGC 2 cut(s) 92, 95
GluI GCNGC 2 cut(s) 92, 95
HgaI GACGC 1 cut(s) 184
Hin1I GRCGYC 1 cut(s) 176
Hin1II CATG 1 cut(s) 338
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HinfI GANTC 3 cut(s) 109, 134, 308
HphI GGTGA 2 cut(s) 61, 89
Hpy166II GTNNAC 1 cut(s) 166
Hpy188I TCNGA 1 cut(s) 265
Hpy188III TCNNGA 1 cut(s) 328
Hpy8I GTNNAC 1 cut(s) 166
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 1 cut(s) 212
HpyCH4IV ACGT 1 cut(s) 162
HpyCH4V TGCA 2 cut(s) 104, 189
HpySE526I ACGT 1 cut(s) 162
Hsp92I GRCGYC 1 cut(s) 176
Hsp92II CATG 1 cut(s) 338
LpnPI CCDG 6 cut(s) 32, 135, 182, 192, 193, 219
Lsp1109I GCAGC 1 cut(s) 78
MaeII ACGT 1 cut(s) 162
MboII GAAGA 2 cut(s) 184, 249
MluCI AATT 2 cut(s) 190, 343
MlyI GAGTC 1 cut(s) 302
MmeI TCCRAC 1 cut(s) 52
MnlI CCTC 5 cut(s) 68, 207, 215, 271, 278
MroXI GAANNNNTTC 1 cut(s) 241
MseI TTAA 2 cut(s) 87, 346
MspA1I CMGCKG 1 cut(s) 116
NlaIII CATG 1 cut(s) 338
NlaIV GGNNCC 1 cut(s) 258
NspV TTCGAA 1 cut(s) 216
PdmI GAANNNNTTC 1 cut(s) 241
PfeI GAWTC 2 cut(s) 109, 134
Pfl23II CGTACG 1 cut(s) 201
PkrI GCNGC 2 cut(s) 93, 96
PleI GAGTC 1 cut(s) 302
PpsI GAGTC 1 cut(s) 302
PspLI CGTACG 1 cut(s) 201
PspN4I GGNNCC 1 cut(s) 258
RsaI GTAC 1 cut(s) 203
RsaNI GTAC 1 cut(s) 202
SaqAI TTAA 2 cut(s) 87, 346
SatI GCNGC 2 cut(s) 92, 95
SchI GAGTC 1 cut(s) 302
SetI ASST 8 cut(s) 79, 93, 165, 171, 184, 258, 270, 277
SfuI TTCGAA 1 cut(s) 216
Sse9I AATT 2 cut(s) 190, 343
SsiI CCGC 3 cut(s) 68, 95, 114
TaiI ACGT 1 cut(s) 165
TaqI TCGA 2 cut(s) 144, 216
TasI AATT 2 cut(s) 190, 343
TauI GCSGC 1 cut(s) 97
TfiI GAWTC 2 cut(s) 109, 134
Tru1I TTAA 2 cut(s) 87, 346
Tru9I TTAA 2 cut(s) 87, 346
TseI GCWGC 1 cut(s) 91
TspGWI ACGGA 1 cut(s) 189
XmnI GAANNNNTTC 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.