RchiOBHm_Chr6g0259991

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0001771
Physical Location & Seq
Forward (+)
15151658 .. 15152470
813 bp
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UTR
Exon/CDS
Intron
PRQ23313

Sequence Viewer

Length: 231 bp
ATGACCGCCATATATGCTGTTTGTTTACATCTTGGGCAGGCAGATGCAATTCTTCTTCCACTGGAAACAGTATTGTCCAAAGATGTAGCGGCTATGACTGATGCTATGTGTAGGGAAAGAGACACCAAGATGGAAATATCTCCGATTCATGGACAAGCCATATACCAGTCTTATTCTTTAAAAATCAGGCTCTCTAGGAGAAAGCCAGGAAGTAGAATTGCCAGTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

76

Amino Acids

8.42

Weight (kDa)

9.14

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 6, 89
AfiI CCNNNNNNNGG 1 cut(s) 149
AjnI CCWGG 1 cut(s) 205
Alw26I GTCTC 1 cut(s) 114
AlwNI CAGNNNCTG 1 cut(s) 228
BccI CCATC 1 cut(s) 124
BciT130I CCWGG 1 cut(s) 207
BcoDI GTCTC 1 cut(s) 114
BfaI CTAG 1 cut(s) 195
BisI GCNGC 1 cut(s) 90
BlsI GCNGC 1 cut(s) 91
Bme1390I CCNGG 1 cut(s) 207
BmrFI CCNGG 1 cut(s) 207
BmsI GCATC 2 cut(s) 34, 91
Bsc4I CCNNNNNNNGG 1 cut(s) 149
Bse1I ACTGG 3 cut(s) 66, 166, 222
BseBI CCWGG 1 cut(s) 207
BseLI CCNNNNNNNGG 1 cut(s) 149
BseNI ACTGG 3 cut(s) 66, 166, 222
BslI CCNNNNNNNGG 1 cut(s) 149
BsmAI GTCTC 1 cut(s) 114
BspACI CCGC 2 cut(s) 6, 89
BsrI ACTGG 3 cut(s) 66, 166, 222
Bst2UI CCWGG 1 cut(s) 207
Bst4CI ACNGT 1 cut(s) 70
BstC8I GCNNGC 1 cut(s) 39
BstMAI GTCTC 1 cut(s) 114
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstNI CCWGG 1 cut(s) 207
BstSCI CCNGG 1 cut(s) 205
BtsIMutI CAGTG 1 cut(s) 59
Cac8I GCNNGC 1 cut(s) 39
CaiI CAGNNNCTG 1 cut(s) 228
CviAII CATG 1 cut(s) 149
CviJI RGCY 4 cut(s) 92, 158, 190, 205
CviKI_1 RGCY 4 cut(s) 92, 158, 190, 205
DraI TTTAAA 1 cut(s) 180
EcoRII CCWGG 1 cut(s) 205
FaeI CATG 1 cut(s) 152
FaiI YATR 8 cut(s) 11, 13, 15, 95, 107, 150, 161, 163
FatI CATG 1 cut(s) 148
Fnu4HI GCNGC 1 cut(s) 90
Fsp4HI GCNGC 1 cut(s) 90
FspBI CTAG 1 cut(s) 195
GluI GCNGC 1 cut(s) 90
Hin1II CATG 1 cut(s) 152
HinfI GANTC 1 cut(s) 145
Hpy166II GTNNAC 1 cut(s) 26
Hpy188I TCNGA 1 cut(s) 144
Hpy8I GTNNAC 1 cut(s) 26
HpyCH4III ACNGT 1 cut(s) 70
HpyCH4V TGCA 1 cut(s) 47
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
Hsp92II CATG 1 cut(s) 152
LpnPI CCDG 6 cut(s) 23, 47, 172, 179, 192, 219
LweI GCATC 2 cut(s) 34, 91
MaeI CTAG 1 cut(s) 195
MaeIII GTNAC 1 cut(s) 224
MboII GAAGA 2 cut(s) 44, 47
MluCI AATT 2 cut(s) 48, 216
MseI TTAA 1 cut(s) 179
MslI CAYNNNNRTG 1 cut(s) 128
MspR9I CCNGG 1 cut(s) 207
MvaI CCWGG 1 cut(s) 207
MwoI GCNNNNNNNGC 1 cut(s) 14
NlaIII CATG 1 cut(s) 152
PfeI GAWTC 1 cut(s) 145
PkrI GCNGC 1 cut(s) 91
Psp6I CCWGG 1 cut(s) 205
PspGI CCWGG 1 cut(s) 205
PstNI CAGNNNCTG 1 cut(s) 228
RseI CAYNNNNRTG 1 cut(s) 128
SaqAI TTAA 1 cut(s) 179
SatI GCNGC 1 cut(s) 90
ScrFI CCNGG 1 cut(s) 207
SfaNI GCATC 2 cut(s) 34, 91
SmiMI CAYNNNNRTG 1 cut(s) 128
Sse9I AATT 2 cut(s) 48, 216
SsiI CCGC 2 cut(s) 6, 89
SspMI CTAG 1 cut(s) 195
StyD4I CCNGG 1 cut(s) 205
TaaI ACNGT 1 cut(s) 70
TasI AATT 2 cut(s) 48, 216
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 1 cut(s) 145
Tru1I TTAA 1 cut(s) 179
Tru9I TTAA 1 cut(s) 179
TscAI CASTG 1 cut(s) 66
TspDTI ATGAA 1 cut(s) 137
TspRI CASTG 1 cut(s) 66
XspI CTAG 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.