Rh6AG087700

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001771
Physical Location & Seq
Forward (+)
13153824 .. 13154339
516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG087700.1

Sequence Viewer

Length: 516 bp
ATGTCAAATGGTGAGAGCACCAAAGATTTTGTTGGCGTTGGACTTCCTTTGGAAGATAAAGGATGGTTATTGCCACCAGATAGTATCTGCAGTAGTAGTAGAGATTCTGGCATTACCTTGGCTGAAATGAGTCTTCCAGGTAGCTTCAATGATCAAGAAGATATAAATCAACAGCTTTTGCATGGACCTAGTAGCAGAGATGCTATAGATTTTCCAAATATCACCCCTTACTCTCAAGCTGATAGCCAAGAAATGTTGGATTCTCCGCACAGATCAAAATTTACAGAAGCAGATAACACTCATATTGGTTCTTTCAAGTCAACACCTAGTGACCTAAATGAACATCCACTGGCTCCAGCATCACCAAGTGATGAACCTGTCAGTTTCTGTCCTGATACTTCACGTCCTTCAAACGGGAACAGAGAGGTGGTGTTTGGGGGTAAAGATGAAATATCCTCACTGAACAAGGTTATAATTAAAGATGAAACTCGTGATGCTACACATGCTTCAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

171

Amino Acids

18.45

Weight (kDa)

4.47

Isoelectric Point (pI)

59.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 473
AciI CCGC 1 cut(s) 266
AcsI RAATTY 1 cut(s) 278
AdeI CACNNNGTG 2 cut(s) 329, 368
AfiI CCNNNNNNNGG 1 cut(s) 413
AgsI TTSAA 4 cut(s) 148, 316, 411, 510
AjiI CACGTC 1 cut(s) 404
AjnI CCWGG 1 cut(s) 136
AluBI AGCT 3 cut(s) 144, 175, 239
AluI AGCT 3 cut(s) 144, 175, 239
Alw21I GWGCWC 1 cut(s) 20
AlwNI CAGNNNCTG 1 cut(s) 387
ApoI RAATTY 1 cut(s) 278
AspS9I GGNCC 1 cut(s) 185
AsuHPI GGTGA 3 cut(s) 23, 214, 354
AvaII GGWCC 1 cut(s) 185
BauI CACGAG 1 cut(s) 489
BbsI GAAGAC 1 cut(s) 125
Bbv12I GWGCWC 1 cut(s) 20
BccI CCATC 1 cut(s) 57
BciT130I CCWGG 1 cut(s) 138
BclI TGATCA 1 cut(s) 151
BfaI CTAG 2 cut(s) 189, 327
BfmI CTRYAG 2 cut(s) 88, 204
Bme1390I CCNGG 1 cut(s) 138
Bme18I GGWCC 1 cut(s) 185
BmgBI CACGTC 1 cut(s) 404
BmgT120I GGNCC 1 cut(s) 185
BmiI GGNNCC 1 cut(s) 354
BmrFI CCNGG 1 cut(s) 138
BmsI GCATC 3 cut(s) 190, 368, 484
BpiI GAAGAC 1 cut(s) 125
BpmI CTGGAG 1 cut(s) 339
BpuEI CTTGAG 1 cut(s) 219
BsaBI GATNNNNATC 1 cut(s) 165
BsaJI CCNNGG 1 cut(s) 117
Bsc4I CCNNNNNNNGG 1 cut(s) 413
Bse1I ACTGG 1 cut(s) 354
Bse8I GATNNNNATC 1 cut(s) 165
BseBI CCWGG 1 cut(s) 138
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 2 cut(s) 68, 343
BseJI GATNNNNATC 1 cut(s) 165
BseLI CCNNNNNNNGG 1 cut(s) 413
BseNI ACTGG 1 cut(s) 354
BsiHKAI GWGCWC 1 cut(s) 20
BslI CCNNNNNNNGG 1 cut(s) 413
Bsp1286I GDGCHC 1 cut(s) 20
Bsp143I GATC 2 cut(s) 151, 272
BspACI CCGC 1 cut(s) 266
BspLI GGNNCC 1 cut(s) 354
BspMAI CTGCAG 1 cut(s) 92
BsrI ACTGG 1 cut(s) 354
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 2 cut(s) 151, 272
BssSI CACGAG 1 cut(s) 489
BssT1I CCWWGG 1 cut(s) 117
Bst2BI CACGAG 1 cut(s) 489
Bst2UI CCWGG 1 cut(s) 138
BstF5I GGATG 2 cut(s) 68, 343
BstKTI GATC 2 cut(s) 154, 275
BstMBI GATC 2 cut(s) 151, 272
BstMWI GCNNNNNNNGC 1 cut(s) 503
BstNI CCWGG 1 cut(s) 138
BstNSI RCATGY 1 cut(s) 506
BstSCI CCNGG 1 cut(s) 136
BstSFI CTRYAG 2 cut(s) 88, 204
BstV2I GAAGAC 1 cut(s) 125
BtrI CACGTC 1 cut(s) 404
BtsCI GGATG 2 cut(s) 68, 343
BtsIMutI CAGTG 2 cut(s) 347, 458
CaiI CAGNNNCTG 1 cut(s) 387
Cfr13I GGNCC 1 cut(s) 185
CviAII CATG 2 cut(s) 182, 503
CviJI RGCY 6 cut(s) 122, 144, 175, 239, 246, 353
CviKI_1 RGCY 6 cut(s) 122, 144, 175, 239, 246, 353
DpnI GATC 2 cut(s) 153, 274
DpnII GATC 2 cut(s) 151, 272
DraIII CACNNNGTG 2 cut(s) 329, 368
Eco130I CCWWGG 1 cut(s) 117
Eco47I GGWCC 1 cut(s) 185
EcoRII CCWGG 1 cut(s) 136
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
FaeI CATG 2 cut(s) 185, 506
FaiI YATR 6 cut(s) 164, 183, 206, 303, 473, 504
FatI CATG 2 cut(s) 181, 502
FbaI TGATCA 1 cut(s) 151
FokI GGATG 2 cut(s) 75, 330
FspBI CTAG 2 cut(s) 189, 327
GsuI CTGGAG 1 cut(s) 339
Hin1II CATG 2 cut(s) 185, 506
HincII GTYRAC 1 cut(s) 321
HindII GTYRAC 1 cut(s) 321
HinfI GANTC 3 cut(s) 104, 130, 260
HphI GGTGA 3 cut(s) 23, 214, 354
Hpy166II GTNNAC 1 cut(s) 321
Hpy188III TCNNGA 3 cut(s) 155, 392, 491
Hpy8I GTNNAC 1 cut(s) 321
HpyAV CCTTC 1 cut(s) 417
HpyCH4IV ACGT 1 cut(s) 403
HpyCH4V TGCA 2 cut(s) 90, 181
HpyF10VI GCNNNNNNNGC 1 cut(s) 503
HpySE526I ACGT 1 cut(s) 403
Hsp92II CATG 2 cut(s) 185, 506
Ksp22I TGATCA 1 cut(s) 151
Kzo9I GATC 2 cut(s) 151, 272
LmnI GCTCC 1 cut(s) 358
LpnPI CCDG 8 cut(s) 90, 93, 123, 150, 335, 369, 390, 405
LweI GCATC 3 cut(s) 190, 368, 484
MaeI CTAG 2 cut(s) 189, 327
MaeII ACGT 1 cut(s) 403
MaeIII GTNAC 1 cut(s) 329
MalI GATC 2 cut(s) 153, 274
MboI GATC 2 cut(s) 151, 272
MboII GAAGA 3 cut(s) 65, 125, 170
MhlI GDGCHC 1 cut(s) 20
MluCI AATT 2 cut(s) 278, 474
MlyI GAGTC 1 cut(s) 139
MmeI TCCRAC 2 cut(s) 19, 237
MnlI CCTC 2 cut(s) 418, 466
MseI TTAA 1 cut(s) 477
MspR9I CCNGG 1 cut(s) 138
MvaI CCWGG 1 cut(s) 138
MwoI GCNNNNNNNGC 1 cut(s) 503
NdeII GATC 2 cut(s) 151, 272
NlaIII CATG 2 cut(s) 185, 506
NlaIV GGNNCC 1 cut(s) 354
NmuCI GTSAC 1 cut(s) 329
NspI RCATGY 1 cut(s) 506
PfeI GAWTC 2 cut(s) 104, 260
PleI GAGTC 1 cut(s) 138
PpsI GAGTC 1 cut(s) 138
PsiI TTATAA 1 cut(s) 473
Psp6I CCWGG 1 cut(s) 136
PspGI CCWGG 1 cut(s) 136
PspN4I GGNNCC 1 cut(s) 354
PspPI GGNCC 1 cut(s) 185
PstI CTGCAG 1 cut(s) 92
PstNI CAGNNNCTG 1 cut(s) 387
SaqAI TTAA 1 cut(s) 477
Sau3AI GATC 2 cut(s) 151, 272
Sau96I GGNCC 1 cut(s) 185
SchI GAGTC 1 cut(s) 139
ScrFI CCNGG 1 cut(s) 138
SduI GDGCHC 1 cut(s) 20
SfaNI GCATC 3 cut(s) 190, 368, 484
SfcI CTRYAG 2 cut(s) 88, 204
SinI GGWCC 1 cut(s) 185
SmlI CTYRAG 1 cut(s) 234
SmoI CTYRAG 1 cut(s) 234
Sse9I AATT 2 cut(s) 278, 474
SsiI CCGC 1 cut(s) 266
SspMI CTAG 2 cut(s) 189, 327
StyD4I CCNGG 1 cut(s) 136
StyI CCWWGG 1 cut(s) 117
TaiI ACGT 1 cut(s) 406
TasI AATT 2 cut(s) 278, 474
TfiI GAWTC 2 cut(s) 104, 260
Tru1I TTAA 1 cut(s) 477
Tru9I TTAA 1 cut(s) 477
TscAI CASTG 2 cut(s) 354, 465
TseFI GTSAC 1 cut(s) 329
Tsp45I GTSAC 1 cut(s) 329
TspDTI ATGAA 4 cut(s) 354, 387, 462, 498
TspRI CASTG 2 cut(s) 354, 465
VpaK11BI GGWCC 1 cut(s) 185
XapI RAATTY 1 cut(s) 278
XceI RCATGY 1 cut(s) 506
XspI CTAG 2 cut(s) 189, 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.