Rh6BG105100

Belongs to the PI3 PI4-kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0001771
Physical Location & Seq
Forward (+)
16196038 .. 16196993
956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG105100.1

Sequence Viewer

Length: 636 bp
ATGCAAGGCCTCCACCACCAACGGCAGCAAATAGCCGCGCTTCTCTCTGTCGCTCTTCCCAAGGAAGATTCCTCTAAACCCCCCAGCTCCGACGTCGATGACTCCGCTCGACTCGCCGCCCTCAACTCCCTCCTCGTCACTCACTCCGCCTCCTTCCTCGCCCAGGGCTTCTCTCAGCTTCTCTCCGATAGATGTTATGGGGTGAGGCAAGAGGCTGCGGTGGCATATGGTGCTCTTTGTGCTGTGGTTTGTTCAATTCCTTTTACTTCAAATGGAAGACAGAACCATGGTATGCCTGGGAGCTTGGTTGACCGCTTCATTGGTTGGGCGCTGCCGTTGCTTAGCAATATCAGCGCTGGAGATGGGACCCCGGAATTGGCATTGGACGGCCTGCGAGAGTTTCTTAACGTTGGGGATGTTGGCGGAATCGAGAGATATGCTTTGTCGATTCTTAAAGCGTGCCAAGTTCTTGTTGAGGATGAGAGAACCTCCTTGAGTCTGTTGCACCGCCTTCTCGGTGTTTTGACTTTGATTTCGTTGAAGTTTTCTAGATACTTCCAACCTCATTTTCTTGACATTGTTGATCTGCTTCTCGGGTGGGCATTGGTACCGGACCTTGCCGAATCGGATAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006464 GO:0006468 GO:0006611 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0006974 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031503 GO:0031974 GO:0031981 GO:0032204 GO:0033036 GO:0033043 GO:0033044 GO:0033554 GO:0034613 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0046907 GO:0048519 GO:0048583 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050896 GO:0051028 GO:0051052 GO:0051128 GO:0051168 GO:0051169 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

211

Amino Acids

22.81

Weight (kDa)

5.43

Isoelectric Point (pI)

29.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 96
Acc65I GGTACC 1 cut(s) 607
AccB1I GGYRCC 1 cut(s) 607
AccBSI CCGCTC 1 cut(s) 107
AccII CGCG 1 cut(s) 38
AciI CCGC 8 cut(s) 36, 105, 117, 147, 218, 313, 423, 508
AclI AACGTT 1 cut(s) 408
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 1 cut(s) 609
AfeI AGCGCT 1 cut(s) 355
AfiI CCNNNNNNNGG 2 cut(s) 163, 376
AgsI TTSAA 3 cut(s) 255, 270, 541
AjnI CCWGG 2 cut(s) 162, 295
AjuI GAANNNNNNNTTGG 2 cut(s) 552, 584
AluBI AGCT 3 cut(s) 87, 178, 303
AluI AGCT 3 cut(s) 87, 178, 303
Alw21I GWGCWC 1 cut(s) 235
Ama87I CYCGRG 1 cut(s) 593
Aor51HI AGCGCT 1 cut(s) 355
AoxI GGCC 2 cut(s) 7, 388
ApeKI GCWGC 3 cut(s) 25, 215, 331
ArsI GACNNNNNNTTYG 2 cut(s) 517, 549
Asp718I GGTACC 1 cut(s) 607
AspLEI GCGC 3 cut(s) 40, 331, 356
AspS9I GGNCC 2 cut(s) 366, 613
AsuC2I CCSGG 1 cut(s) 371
AsuHPI GGTGA 1 cut(s) 214
AvaI CYCGRG 1 cut(s) 593
AvaII GGWCC 2 cut(s) 366, 613
BanI GGYRCC 1 cut(s) 607
BbsI GAAGAC 1 cut(s) 283
Bbv12I GWGCWC 1 cut(s) 235
BbvI GCAGC 3 cut(s) 37, 202, 318
BccI CCATC 1 cut(s) 356
BceAI ACGGC 3 cut(s) 38, 319, 403
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 2 cut(s) 164, 297
BcnI CCSGG 1 cut(s) 371
BfaI CTAG 1 cut(s) 549
BfoI RGCGCY 2 cut(s) 332, 357
BisI GCNGC 5 cut(s) 26, 36, 117, 216, 332
BlpI GCTNAGC 1 cut(s) 341
BlsI GCNGC 5 cut(s) 27, 37, 118, 217, 333
Bme1390I CCNGG 3 cut(s) 164, 297, 371
Bme18I GGWCC 2 cut(s) 366, 613
BmeT110I CYCGRG 1 cut(s) 593
BmgT120I GGNCC 2 cut(s) 366, 613
BmiI GGNNCC 3 cut(s) 367, 368, 609
BmrFI CCNGG 3 cut(s) 164, 297, 371
BpiI GAAGAC 1 cut(s) 283
BplI GAGNNNNNCTC 2 cut(s) 473, 505
BpmI CTGGAG 1 cut(s) 378
Bpu1102I GCTNAGC 1 cut(s) 341
BpuEI CTTGAG 1 cut(s) 514
BpuMI CCSGG 1 cut(s) 371
BsaHI GRCGYC 1 cut(s) 93
BsaJI CCNNGG 6 cut(s) 60, 162, 163, 286, 296, 369
BsaWI WCCGGW 1 cut(s) 610
BsaXI ACNNNNNCTCC 2 cut(s) 134, 164
Bsc4I CCNNNNNNNGG 2 cut(s) 163, 376
BseBI CCWGG 2 cut(s) 164, 297
BseDI CCNNGG 6 cut(s) 60, 162, 163, 286, 296, 369
BseGI GGATG 2 cut(s) 421, 484
BseLI CCNNNNNNNGG 2 cut(s) 163, 376
BseMII CTCAG 1 cut(s) 188
BseRI GAGGAG 1 cut(s) 122
BseXI GCAGC 3 cut(s) 37, 202, 318
BseYI CCCAGC 1 cut(s) 83
Bsh1236I CGCG 1 cut(s) 38
BshFI GGCC 2 cut(s) 9, 390
BshNI GGYRCC 1 cut(s) 607
BsiHKAI GWGCWC 1 cut(s) 235
BsiHKCI CYCGRG 1 cut(s) 593
BsiSI CCGG 2 cut(s) 371, 611
BslFI GGGAC 1 cut(s) 379
BslI CCNNNNNNNGG 2 cut(s) 163, 376
BsmFI GGGAC 1 cut(s) 379
BsnI GGCC 2 cut(s) 9, 390
BsoBI CYCGRG 1 cut(s) 593
Bsp1286I GDGCHC 1 cut(s) 235
Bsp143I GATC 1 cut(s) 583
Bsp1720I GCTNAGC 1 cut(s) 341
Bsp19I CCATGG 1 cut(s) 286
BspACI CCGC 8 cut(s) 36, 105, 117, 147, 218, 313, 423, 508
BspANI GGCC 2 cut(s) 9, 390
BspCNI CTCAG 1 cut(s) 187
BspFNI CGCG 1 cut(s) 38
BspLI GGNNCC 3 cut(s) 367, 368, 609
BspQI GCTCTTC 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 607
BsrBI CCGCTC 1 cut(s) 107
BssECI CCNNGG 6 cut(s) 60, 162, 163, 286, 296, 369
BssMI GATC 1 cut(s) 583
BssNI GRCGYC 1 cut(s) 93
BssT1I CCWWGG 2 cut(s) 60, 286
Bst2UI CCWGG 2 cut(s) 164, 297
Bst6I CTCTTC 1 cut(s) 60
BstACI GRCGYC 1 cut(s) 93
BstAPI GCANNNNNTGC 1 cut(s) 230
BstC8I GCNNGC 2 cut(s) 392, 460
BstDEI CTNAG 2 cut(s) 174, 341
BstDSI CCRYGG 1 cut(s) 286
BstENI CCTNNNNNAGG 1 cut(s) 161
BstF5I GGATG 2 cut(s) 421, 484
BstFNI CGCG 1 cut(s) 38
BstH2I RGCGCY 2 cut(s) 332, 357
BstHHI GCGC 3 cut(s) 40, 331, 356
BstKTI GATC 1 cut(s) 586
BstMBI GATC 1 cut(s) 583
BstMWI GCNNNNNNNGC 6 cut(s) 113, 221, 230, 239, 337, 351
BstNI CCWGG 2 cut(s) 164, 297
BstSCI CCNGG 3 cut(s) 162, 295, 369
BstUI CGCG 1 cut(s) 38
BstV1I GCAGC 3 cut(s) 37, 202, 318
BstV2I GAAGAC 1 cut(s) 283
BsuRI GGCC 2 cut(s) 9, 390
BtgI CCRYGG 1 cut(s) 286
BtsCI GGATG 2 cut(s) 421, 484
Cac8I GCNNGC 2 cut(s) 392, 460
CfoI GCGC 3 cut(s) 40, 331, 356
Cfr13I GGNCC 2 cut(s) 366, 613
Csp6I GTAC 1 cut(s) 608
CviAII CATG 1 cut(s) 287
CviJI RGCY 8 cut(s) 9, 35, 87, 168, 178, 215, 303, 390
CviKI_1 RGCY 8 cut(s) 9, 35, 87, 168, 178, 215, 303, 390
CviQI GTAC 1 cut(s) 608
DdeI CTNAG 2 cut(s) 174, 341
DpnI GATC 1 cut(s) 585
DpnII GATC 1 cut(s) 583
Eam1104I CTCTTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 60
EciI GGCGGA 2 cut(s) 136, 438
Eco130I CCWWGG 2 cut(s) 60, 286
Eco147I AGGCCT 1 cut(s) 9
Eco47I GGWCC 2 cut(s) 366, 613
Eco47III AGCGCT 1 cut(s) 355
Eco88I CYCGRG 1 cut(s) 593
EcoNI CCTNNNNNAGG 1 cut(s) 161
EcoO109I RGGNCCY 1 cut(s) 366
EcoRII CCWGG 2 cut(s) 162, 295
EcoT14I CCWWGG 2 cut(s) 60, 286
ErhI CCWWGG 2 cut(s) 60, 286
FaeI CATG 1 cut(s) 290
FaiI YATR 6 cut(s) 198, 226, 228, 288, 293, 438
FaqI GGGAC 1 cut(s) 379
FatI CATG 1 cut(s) 286
FauNDI CATATG 1 cut(s) 226
Fnu4HI GCNGC 5 cut(s) 26, 36, 117, 216, 332
FokI GGATG 2 cut(s) 428, 491
Fsp4HI GCNGC 5 cut(s) 26, 36, 117, 216, 332
FspBI CTAG 1 cut(s) 549
GlaI GCGC 3 cut(s) 39, 330, 355
GluI GCNGC 5 cut(s) 26, 36, 117, 216, 332
GsaI CCCAGC 1 cut(s) 87
GsuI CTGGAG 1 cut(s) 378
HaeII RGCGCY 2 cut(s) 332, 357
HaeIII GGCC 2 cut(s) 9, 390
HapII CCGG 2 cut(s) 371, 611
HhaI GCGC 3 cut(s) 40, 331, 356
Hin1I GRCGYC 1 cut(s) 93
Hin1II CATG 1 cut(s) 290
Hin6I GCGC 3 cut(s) 38, 329, 354
HinP1I GCGC 3 cut(s) 38, 329, 354
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HinfI GANTC 7 cut(s) 68, 101, 111, 426, 448, 496, 623
HpaII CCGG 2 cut(s) 371, 611
HphI GGTGA 1 cut(s) 214
Hpy166II GTNNAC 1 cut(s) 310
Hpy188I TCNGA 3 cut(s) 91, 187, 628
Hpy188III TCNNGA 3 cut(s) 430, 549, 572
Hpy8I GTNNAC 1 cut(s) 310
Hpy99I CGWCG 2 cut(s) 95, 98
HpyAV CCTTC 2 cut(s) 163, 521
HpyCH4IV ACGT 2 cut(s) 93, 408
HpyCH4V TGCA 2 cut(s) 4, 505
HpyF10VI GCNNNNNNNGC 6 cut(s) 113, 221, 230, 239, 337, 351
HpyF3I CTNAG 2 cut(s) 174, 341
HpySE526I ACGT 2 cut(s) 93, 408
Hsp92I GRCGYC 1 cut(s) 93
Hsp92II CATG 1 cut(s) 290
HspAI GCGC 3 cut(s) 38, 329, 354
KflI GGGWCCC 1 cut(s) 366
KpnI GGTACC 1 cut(s) 611
Kzo9I GATC 1 cut(s) 583
LguI GCTCTTC 1 cut(s) 60
LmnI GCTCC 2 cut(s) 92, 300
LpnPI CCDG 9 cut(s) 97, 149, 176, 282, 309, 342, 384, 404, 624
Lsp1109I GCAGC 3 cut(s) 37, 202, 318
MaeI CTAG 1 cut(s) 549
MaeII ACGT 2 cut(s) 93, 408
MaeIII GTNAC 1 cut(s) 136
MalI GATC 1 cut(s) 585
MbiI CCGCTC 1 cut(s) 107
MboI GATC 1 cut(s) 583
MboII GAAGA 3 cut(s) 47, 77, 288
MhlI GDGCHC 1 cut(s) 235
MluCI AATT 2 cut(s) 255, 374
MlyI GAGTC 3 cut(s) 95, 105, 505
MmeI TCCRAC 2 cut(s) 114, 583
MseI TTAA 2 cut(s) 405, 453
MspI CCGG 2 cut(s) 371, 611
MspR9I CCNGG 3 cut(s) 164, 297, 371
MvaI CCWGG 2 cut(s) 164, 297
MvnI CGCG 1 cut(s) 38
MwoI GCNNNNNNNGC 6 cut(s) 113, 221, 230, 239, 337, 351
NciI CCSGG 1 cut(s) 371
NcoI CCATGG 1 cut(s) 286
NdeI CATATG 1 cut(s) 226
NdeII GATC 1 cut(s) 583
NlaIII CATG 1 cut(s) 290
NlaIV GGNNCC 3 cut(s) 367, 368, 609
NmuCI GTSAC 1 cut(s) 136
PasI CCCWGGG 1 cut(s) 163
PceI AGGCCT 1 cut(s) 9
PciSI GCTCTTC 1 cut(s) 60
PfeI GAWTC 4 cut(s) 68, 426, 448, 623
PkrI GCNGC 5 cut(s) 27, 37, 118, 217, 333
PleI GAGTC 3 cut(s) 95, 105, 504
PpsI GAGTC 3 cut(s) 95, 105, 504
PpuMI RGGWCCY 1 cut(s) 366
Psp1406I AACGTT 1 cut(s) 408
Psp5II RGGWCCY 1 cut(s) 366
Psp6I CCWGG 2 cut(s) 162, 295
PspFI CCCAGC 1 cut(s) 83
PspGI CCWGG 2 cut(s) 162, 295
PspN4I GGNNCC 3 cut(s) 367, 368, 609
PspPI GGNCC 2 cut(s) 366, 613
PspPPI RGGWCCY 1 cut(s) 366
RsaI GTAC 1 cut(s) 609
RsaNI GTAC 1 cut(s) 608
SapI GCTCTTC 1 cut(s) 60
SaqAI TTAA 2 cut(s) 405, 453
SatI GCNGC 5 cut(s) 26, 36, 117, 216, 332
Sau3AI GATC 1 cut(s) 583
Sau96I GGNCC 2 cut(s) 366, 613
SchI GAGTC 3 cut(s) 95, 105, 505
ScrFI CCNGG 3 cut(s) 164, 297, 371
SduI GDGCHC 1 cut(s) 235
SetI ASST 8 cut(s) 89, 96, 180, 305, 411, 491, 565, 618
SinI GGWCC 2 cut(s) 366, 613
SmlI CTYRAG 1 cut(s) 493
SmoI CTYRAG 1 cut(s) 493
Sse9I AATT 2 cut(s) 255, 374
SseBI AGGCCT 1 cut(s) 9
SsiI CCGC 8 cut(s) 36, 105, 117, 147, 218, 313, 423, 508
SspMI CTAG 1 cut(s) 549
StuI AGGCCT 1 cut(s) 9
StyD4I CCNGG 3 cut(s) 162, 295, 369
StyI CCWWGG 2 cut(s) 60, 286
TaiI ACGT 2 cut(s) 96, 411
TaqI TCGA 4 cut(s) 96, 109, 429, 446
TasI AATT 2 cut(s) 255, 374
TauI GCSGC 2 cut(s) 38, 119
TfiI GAWTC 4 cut(s) 68, 426, 448, 623
Tru1I TTAA 2 cut(s) 405, 453
Tru9I TTAA 2 cut(s) 405, 453
TseFI GTSAC 1 cut(s) 136
TseI GCWGC 3 cut(s) 25, 215, 331
Tsp45I GTSAC 1 cut(s) 136
TspDTI ATGAA 1 cut(s) 307
VpaK11BI GGWCC 2 cut(s) 366, 613
XagI CCTNNNNNAGG 1 cut(s) 161
XbaI TCTAGA 1 cut(s) 548
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XspI CTAG 1 cut(s) 549
ZraI GACGTC 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.