Rh6AG109600

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001771
Physical Location & Seq
Forward (+)
15981661 .. 15982071
411 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG109600.1

Sequence Viewer

Length: 411 bp
ATGTCAAATTGTGAGAGCACCAAAGATTTTGTTAGCGTTGGACTTCCTTTGGAAGATAAAGGATGGTTATTGCCGCCAGATAGTATCTGCAGCCGTAGTACAGATTCTGGCATTACCTTGGCTGAAATGAGTCTTTCAGGTAGCTTCAATGATCAAGAAGATATGAAGCAACAGCTTTTGCACGGACCTAGTAGCAGAGATGCTAAAGATTTTCAAAATACCACCCCTTACTGTCAAGATGATAGCCAAGAAATGTTGGATTTTCCGCAAAGATCAAAATATACAGAAGCAGATAGCACTCATATTAGTTCTTTCAAGTCAACACCTAGTGACCTAAATGAATATCCACTGGCTCTGGCATCACCACTGGTTCATCAGCGTCTGTCCTGGTACTTCACGTCCTTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

136

Amino Acids

15.28

Weight (kDa)

4.57

Isoelectric Point (pI)

57.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 74, 266
AdeI CACNNNGTG 1 cut(s) 329
AfaI GTAC 2 cut(s) 100, 392
AgsI TTSAA 4 cut(s) 148, 215, 316, 406
AjiI CACGTC 1 cut(s) 399
AjnI CCWGG 1 cut(s) 386
AluBI AGCT 2 cut(s) 144, 175
AluI AGCT 2 cut(s) 144, 175
Alw21I GWGCWC 1 cut(s) 20
AlwNI CAGNNNCTG 2 cut(s) 107, 382
ApeKI GCWGC 1 cut(s) 90
AspS9I GGNCC 1 cut(s) 185
AsuHPI GGTGA 1 cut(s) 354
AvaII GGWCC 1 cut(s) 185
Bbv12I GWGCWC 1 cut(s) 20
BbvI GCAGC 1 cut(s) 102
BccI CCATC 1 cut(s) 57
BceAI ACGGC 1 cut(s) 78
BciT130I CCWGG 1 cut(s) 388
BclI TGATCA 1 cut(s) 151
BfaI CTAG 2 cut(s) 189, 327
BfmI CTRYAG 1 cut(s) 88
BisI GCNGC 2 cut(s) 74, 91
BlsI GCNGC 2 cut(s) 75, 92
Bme1390I CCNGG 1 cut(s) 388
Bme18I GGWCC 1 cut(s) 185
BmgBI CACGTC 1 cut(s) 399
BmgT120I GGNCC 1 cut(s) 185
BmrFI CCNGG 1 cut(s) 388
BmsI GCATC 2 cut(s) 190, 368
BsaJI CCNNGG 1 cut(s) 117
Bse1I ACTGG 2 cut(s) 354, 372
BseBI CCWGG 1 cut(s) 388
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 1 cut(s) 68
BseNI ACTGG 2 cut(s) 354, 372
BseXI GCAGC 1 cut(s) 102
BsiHKAI GWGCWC 1 cut(s) 20
Bsp1286I GDGCHC 1 cut(s) 20
Bsp143I GATC 2 cut(s) 151, 272
BspACI CCGC 2 cut(s) 74, 266
BspMAI CTGCAG 1 cut(s) 92
BsrI ACTGG 2 cut(s) 354, 372
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 2 cut(s) 151, 272
BssT1I CCWWGG 1 cut(s) 117
Bst2UI CCWGG 1 cut(s) 388
Bst4CI ACNGT 1 cut(s) 233
BstF5I GGATG 1 cut(s) 68
BstKTI GATC 2 cut(s) 154, 275
BstMBI GATC 2 cut(s) 151, 272
BstNI CCWGG 1 cut(s) 388
BstSCI CCNGG 1 cut(s) 386
BstSFI CTRYAG 1 cut(s) 88
BstV1I GCAGC 1 cut(s) 102
BtrI CACGTC 1 cut(s) 399
BtsCI GGATG 1 cut(s) 68
BtsIMutI CAGTG 2 cut(s) 347, 365
CaiI CAGNNNCTG 2 cut(s) 107, 382
Cfr13I GGNCC 1 cut(s) 185
CseI GACGC 1 cut(s) 368
Csp6I GTAC 2 cut(s) 99, 391
CviJI RGCY 6 cut(s) 93, 122, 144, 175, 246, 353
CviKI_1 RGCY 6 cut(s) 93, 122, 144, 175, 246, 353
CviQI GTAC 2 cut(s) 99, 391
DpnI GATC 2 cut(s) 153, 274
DpnII GATC 2 cut(s) 151, 272
DraIII CACNNNGTG 1 cut(s) 329
Eco130I CCWWGG 1 cut(s) 117
Eco47I GGWCC 1 cut(s) 185
EcoRII CCWGG 1 cut(s) 386
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
FaiI YATR 3 cut(s) 164, 282, 303
FbaI TGATCA 1 cut(s) 151
Fnu4HI GCNGC 2 cut(s) 74, 91
FokI GGATG 1 cut(s) 75
Fsp4HI GCNGC 2 cut(s) 74, 91
FspBI CTAG 2 cut(s) 189, 327
GluI GCNGC 2 cut(s) 74, 91
HgaI GACGC 1 cut(s) 368
HincII GTYRAC 1 cut(s) 321
HindII GTYRAC 1 cut(s) 321
HinfI GANTC 2 cut(s) 104, 130
HphI GGTGA 1 cut(s) 354
Hpy166II GTNNAC 1 cut(s) 321
Hpy188III TCNNGA 2 cut(s) 155, 236
Hpy8I GTNNAC 1 cut(s) 321
HpyCH4III ACNGT 1 cut(s) 233
HpyCH4IV ACGT 1 cut(s) 398
HpyCH4V TGCA 2 cut(s) 90, 181
HpySE526I ACGT 1 cut(s) 398
Ksp22I TGATCA 1 cut(s) 151
Kzo9I GATC 2 cut(s) 151, 272
LpnPI CCDG 8 cut(s) 90, 93, 123, 335, 341, 353, 373, 400
Lsp1109I GCAGC 1 cut(s) 102
LweI GCATC 2 cut(s) 190, 368
MaeI CTAG 2 cut(s) 189, 327
MaeII ACGT 1 cut(s) 398
MaeIII GTNAC 1 cut(s) 329
MalI GATC 2 cut(s) 153, 274
MboI GATC 2 cut(s) 151, 272
MboII GAAGA 2 cut(s) 65, 170
MhlI GDGCHC 1 cut(s) 20
MluCI AATT 1 cut(s) 7
MlyI GAGTC 1 cut(s) 139
MmeI TCCRAC 2 cut(s) 19, 237
MspR9I CCNGG 1 cut(s) 388
MvaI CCWGG 1 cut(s) 388
NdeII GATC 2 cut(s) 151, 272
NmuCI GTSAC 1 cut(s) 329
PfeI GAWTC 1 cut(s) 104
PkrI GCNGC 2 cut(s) 75, 92
PleI GAGTC 1 cut(s) 138
PpsI GAGTC 1 cut(s) 138
Psp6I CCWGG 1 cut(s) 386
PspGI CCWGG 1 cut(s) 386
PspPI GGNCC 1 cut(s) 185
PstI CTGCAG 1 cut(s) 92
PstNI CAGNNNCTG 2 cut(s) 107, 382
RsaI GTAC 2 cut(s) 100, 392
RsaNI GTAC 2 cut(s) 99, 391
SatI GCNGC 2 cut(s) 74, 91
Sau3AI GATC 2 cut(s) 151, 272
Sau96I GGNCC 1 cut(s) 185
SchI GAGTC 1 cut(s) 139
ScrFI CCNGG 1 cut(s) 388
SduI GDGCHC 1 cut(s) 20
SetI ASST 8 cut(s) 119, 142, 146, 177, 190, 328, 336, 401
SfaNI GCATC 2 cut(s) 190, 368
SfcI CTRYAG 1 cut(s) 88
SinI GGWCC 1 cut(s) 185
Sse9I AATT 1 cut(s) 7
SsiI CCGC 2 cut(s) 74, 266
SspMI CTAG 2 cut(s) 189, 327
StyD4I CCNGG 1 cut(s) 386
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 1 cut(s) 233
TaiI ACGT 1 cut(s) 401
TasI AATT 1 cut(s) 7
TatI WGTACW 1 cut(s) 98
TauI GCSGC 1 cut(s) 76
TfiI GAWTC 1 cut(s) 104
TscAI CASTG 2 cut(s) 354, 372
TseFI GTSAC 1 cut(s) 329
TseI GCWGC 1 cut(s) 90
Tsp45I GTSAC 1 cut(s) 329
TspDTI ATGAA 3 cut(s) 179, 354, 362
TspGWI ACGGA 1 cut(s) 198
TspRI CASTG 2 cut(s) 354, 372
VpaK11BI GGWCC 1 cut(s) 185
XspI CTAG 2 cut(s) 189, 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.