Rh6AG110400

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001771
Physical Location & Seq
Forward (+)
16140952 .. 16141281
330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG110400.1

Sequence Viewer

Length: 330 bp
ATGACAACTGGCAATGAAATTATTGCAATTCATACCTTGGCACAGTATGATGAGGGTGAATATCAGGCAACATGGGCATGCCTTGGTTTGACACCTAGAAGTAGCATTGAGCTCGCACTTGATCCCAAATTGGCCTTGCAAAGAAGTGAGCAGATGCTCTTACAGGCAATGCTTTTTCAGAATGGTGAAAAGGAAGATAAGGTGGCACATGAGTTAGAAAAGGCCAGGTCAATGTTGGAGGAAACATTGTCTGTTCTGCCGCTAGTCGCTAGATGGGCTAGAAGAGGCGACTGCACATGCTACTCAGTTGCACTGCATCTCTGCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

109

Amino Acids

12.25

Weight (kDa)

5.1

Isoelectric Point (pI)

53.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 260
AclWI GGATC 1 cut(s) 116
AjnI CCWGG 1 cut(s) 224
AluBI AGCT 1 cut(s) 112
AluI AGCT 1 cut(s) 112
Alw21I GWGCWC 1 cut(s) 114
AlwI GGATC 1 cut(s) 116
AoxI GGCC 2 cut(s) 132, 222
AsuHPI GGTGA 2 cut(s) 68, 197
BanII GRGCYC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 114
BccI CCATC 1 cut(s) 267
BcgI CGANNNNNNTGC 2 cut(s) 94, 128
BciT130I CCWGG 1 cut(s) 226
BfaI CTAG 4 cut(s) 96, 263, 270, 279
BisI GCNGC 1 cut(s) 260
BlsI GCNGC 1 cut(s) 261
Bme1390I CCNGG 1 cut(s) 226
BmrFI CCNGG 1 cut(s) 226
BmsI GCATC 2 cut(s) 144, 325
BsaJI CCNNGG 2 cut(s) 36, 82
Bse1I ACTGG 1 cut(s) 13
Bse3DI GCAATG 2 cut(s) 19, 174
BseBI CCWGG 1 cut(s) 226
BseDI CCNNGG 2 cut(s) 36, 82
BseMI GCAATG 2 cut(s) 19, 174
BseMII CTCAG 1 cut(s) 318
BseNI ACTGG 1 cut(s) 13
BsgI GTGCAG 1 cut(s) 277
BshFI GGCC 2 cut(s) 134, 224
BsiHKAI GWGCWC 1 cut(s) 114
BsnI GGCC 2 cut(s) 134, 224
Bsp1286I GDGCHC 1 cut(s) 114
Bsp143I GATC 1 cut(s) 121
BspACI CCGC 1 cut(s) 260
BspANI GGCC 2 cut(s) 134, 224
BspCNI CTCAG 1 cut(s) 317
BspPI GGATC 1 cut(s) 116
BsrDI GCAATG 2 cut(s) 19, 174
BsrI ACTGG 1 cut(s) 13
BssECI CCNNGG 2 cut(s) 36, 82
BssMI GATC 1 cut(s) 121
BssT1I CCWWGG 2 cut(s) 36, 82
Bst2UI CCWGG 1 cut(s) 226
Bst4CI ACNGT 1 cut(s) 45
Bst6I CTCTTC 1 cut(s) 277
BstC8I GCNNGC 2 cut(s) 79, 114
BstDEI CTNAG 1 cut(s) 304
BstKTI GATC 1 cut(s) 124
BstMBI GATC 1 cut(s) 121
BstMWI GCNNNNNNNGC 2 cut(s) 74, 275
BstNI CCWGG 1 cut(s) 226
BstNSI RCATGY 2 cut(s) 81, 300
BstSCI CCNGG 1 cut(s) 224
BsuRI GGCC 2 cut(s) 134, 224
BtsI GCAGTG 1 cut(s) 311
BtsIMutI CAGTG 1 cut(s) 311
Cac8I GCNNGC 2 cut(s) 79, 114
CviAII CATG 4 cut(s) 72, 78, 209, 297
CviJI RGCY 4 cut(s) 112, 134, 224, 278
CviKI_1 RGCY 4 cut(s) 112, 134, 224, 278
DdeI CTNAG 1 cut(s) 304
DpnI GATC 1 cut(s) 123
DpnII GATC 1 cut(s) 121
Eam1104I CTCTTC 1 cut(s) 277
EarI CTCTTC 1 cut(s) 277
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 36, 82
Eco24I GRGCYC 1 cut(s) 114
Eco53kI GAGCTC 1 cut(s) 112
EcoICRI GAGCTC 1 cut(s) 112
EcoRII CCWGG 1 cut(s) 224
EcoT14I CCWWGG 2 cut(s) 36, 82
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 2 cut(s) 36, 82
FaeI CATG 4 cut(s) 75, 81, 212, 300
FaiI YATR 8 cut(s) 33, 48, 73, 79, 210, 298, 326, 328
FatI CATG 4 cut(s) 71, 77, 208, 296
FauNDI CATATG 1 cut(s) 326
Fnu4HI GCNGC 1 cut(s) 260
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 1 cut(s) 260
FspBI CTAG 4 cut(s) 96, 263, 270, 279
GluI GCNGC 1 cut(s) 260
HaeIII GGCC 2 cut(s) 134, 224
Hin1II CATG 4 cut(s) 75, 81, 212, 300
HphI GGTGA 2 cut(s) 68, 197
Hpy188I TCNGA 1 cut(s) 180
HpyCH4III ACNGT 1 cut(s) 45
HpyCH4V TGCA 6 cut(s) 26, 139, 294, 311, 316, 324
HpyF10VI GCNNNNNNNGC 2 cut(s) 74, 275
HpyF3I CTNAG 1 cut(s) 304
Hsp92II CATG 4 cut(s) 75, 81, 212, 300
Kzo9I GATC 1 cut(s) 121
LpnPI CCDG 4 cut(s) 50, 149, 211, 238
LweI GCATC 2 cut(s) 144, 325
MaeI CTAG 4 cut(s) 96, 263, 270, 279
MalI GATC 1 cut(s) 123
MboI GATC 1 cut(s) 121
MboII GAAGA 2 cut(s) 206, 294
MhlI GDGCHC 1 cut(s) 114
MluCI AATT 3 cut(s) 18, 27, 128
MmeI TCCRAC 1 cut(s) 216
MnlI CCTC 3 cut(s) 46, 232, 278
MslI CAYNNNNRTG 1 cut(s) 76
MspR9I CCNGG 1 cut(s) 226
MvaI CCWGG 1 cut(s) 226
MwoI GCNNNNNNNGC 2 cut(s) 74, 275
NdeI CATATG 1 cut(s) 326
NdeII GATC 1 cut(s) 121
NlaIII CATG 4 cut(s) 75, 81, 212, 300
NspI RCATGY 2 cut(s) 81, 300
PaeI GCATGC 1 cut(s) 81
PkrI GCNGC 1 cut(s) 261
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 224
PspGI CCWGG 1 cut(s) 224
RseI CAYNNNNRTG 1 cut(s) 76
SacI GAGCTC 1 cut(s) 114
SatI GCNGC 1 cut(s) 260
Sau3AI GATC 1 cut(s) 121
ScrFI CCNGG 1 cut(s) 226
SduI GDGCHC 1 cut(s) 114
SetI ASST 5 cut(s) 38, 97, 114, 204, 230
SfaNI GCATC 2 cut(s) 144, 325
SmiMI CAYNNNNRTG 1 cut(s) 76
SphI GCATGC 1 cut(s) 81
Sse9I AATT 3 cut(s) 18, 27, 128
SsiI CCGC 1 cut(s) 260
SspMI CTAG 4 cut(s) 96, 263, 270, 279
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 224
StyI CCWWGG 2 cut(s) 36, 82
TaaI ACNGT 1 cut(s) 45
TasI AATT 3 cut(s) 18, 27, 128
TauI GCSGC 1 cut(s) 262
TscAI CASTG 1 cut(s) 318
TspDTI ATGAA 2 cut(s) 20, 30
TspRI CASTG 1 cut(s) 318
XceI RCATGY 2 cut(s) 81, 300
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XspI CTAG 4 cut(s) 96, 263, 270, 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.