RchiOBHm_Chr6g0260001

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
15152472 .. 15154927
2456 bp
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UTR
Exon/CDS
Intron
PRQ23314

Sequence Viewer

Length: 489 bp
ATGAGTCTTCCAGAAGCAGATAACACTCGTATTGGTTCTTTCAAGTCAACACCTAATGAATATCCACTGGCTCCAACATCACCAAGTGATGAACCTGTCCGTGTCTGTCCTGATACTTCACGTCCTTCTAACAGGAACAGAGAGGTGGTGTTTGGGGGTAAAGATGAAATATCCTCACTGAACAAGGTTATAATTAAAGATGAAACTCGTGACGCTACACATGCTTCGAGTCGAGTGGGCAGGGGTAAAAACCCTTGTGCAATGTCAGTCTTGAGACTAGTTCAGATGAAACTAGATGGTCGGGATATATCTGAAAACAGAGAAATCAGTATCTCCAAACAAGTGGACTATCTACCTAAGCAAGCCACTAGTGCAGACAATCTTTGCAACATGTATGAAGAATTGAGAATGGAGCTTCTTACACTGGGCAAGGCATTAATTGCTTCAGCAATCCCATCTCTTTTGGCTTCACATCTCCTGTTCATTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

162

Amino Acids

17.86

Weight (kDa)

6.74

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 191
AcuI CTGAAG 1 cut(s) 429
AdeI CACNNNGTG 1 cut(s) 86
AflIII ACRYGT 1 cut(s) 390
AgsI TTSAA 1 cut(s) 43
AhlI ACTAGT 2 cut(s) 277, 368
AjiI CACGTC 1 cut(s) 122
AluBI AGCT 1 cut(s) 415
AluI AGCT 1 cut(s) 415
Alw26I GTCTC 1 cut(s) 268
AseI ATTAAT 1 cut(s) 437
AsuHPI GGTGA 1 cut(s) 72
BauI CACGAG 1 cut(s) 207
BccI CCATC 2 cut(s) 290, 463
BcoDI GTCTC 1 cut(s) 268
BcuI ACTAGT 2 cut(s) 277, 368
BfaI CTAG 3 cut(s) 278, 293, 369
BmgBI CACGTC 1 cut(s) 122
BmiI GGNNCC 1 cut(s) 72
BmrI ACTGGG 1 cut(s) 434
BmuI ACTGGG 1 cut(s) 434
Bpu10I CCTNAGC 1 cut(s) 357
BpuEI CTTGAG 1 cut(s) 292
Bse1I ACTGG 2 cut(s) 72, 429
Bse3DI GCAATG 1 cut(s) 267
BseMI GCAATG 1 cut(s) 267
BseNI ACTGG 2 cut(s) 72, 429
BsgI GTGCAG 1 cut(s) 393
BsmAI GTCTC 1 cut(s) 268
BspLI GGNNCC 1 cut(s) 72
BsrDI GCAATG 1 cut(s) 267
BsrI ACTGG 2 cut(s) 72, 429
BssSI CACGAG 1 cut(s) 207
Bst2BI CACGAG 1 cut(s) 207
BstAPI GCANNNNNTGC 1 cut(s) 440
BstC8I GCNNGC 1 cut(s) 363
BstDEI CTNAG 1 cut(s) 357
BstMAI GTCTC 1 cut(s) 268
BstMWI GCNNNNNNNGC 3 cut(s) 221, 371, 440
BstNSI RCATGY 2 cut(s) 224, 394
BstXI CCANNNNNNTGG 1 cut(s) 343
BtrI CACGTC 1 cut(s) 122
BtsIMutI CAGTG 3 cut(s) 65, 176, 422
Cac8I GCNNGC 1 cut(s) 363
CseI GACGC 1 cut(s) 221
CviAII CATG 2 cut(s) 221, 391
CviJI RGCY 4 cut(s) 71, 365, 415, 467
CviKI_1 RGCY 4 cut(s) 71, 365, 415, 467
DdeI CTNAG 1 cut(s) 357
DraIII CACNNNGTG 1 cut(s) 86
Eco57I CTGAAG 1 cut(s) 429
FaeI CATG 2 cut(s) 224, 394
FaiI YATR 5 cut(s) 191, 222, 308, 392, 396
FatI CATG 2 cut(s) 220, 390
FspBI CTAG 3 cut(s) 278, 293, 369
HgaI GACGC 1 cut(s) 221
Hin1II CATG 2 cut(s) 224, 394
HincII GTYRAC 1 cut(s) 48
HindII GTYRAC 1 cut(s) 48
HinfI GANTC 2 cut(s) 4, 229
HphI GGTGA 1 cut(s) 72
Hpy166II GTNNAC 2 cut(s) 48, 346
Hpy188I TCNGA 2 cut(s) 285, 313
Hpy188III TCNNGA 5 cut(s) 11, 110, 209, 271, 302
Hpy8I GTNNAC 2 cut(s) 48, 346
HpyAV CCTTC 1 cut(s) 135
HpyCH4IV ACGT 1 cut(s) 121
HpyCH4V TGCA 3 cut(s) 260, 374, 387
HpyF10VI GCNNNNNNNGC 3 cut(s) 221, 371, 440
HpyF3I CTNAG 1 cut(s) 357
HpySE526I ACGT 1 cut(s) 121
Hsp92II CATG 2 cut(s) 224, 394
LmnI GCTCC 2 cut(s) 76, 412
LpnPI CCDG 7 cut(s) 24, 53, 108, 118, 123, 226, 410
MaeI CTAG 3 cut(s) 278, 293, 369
MaeII ACGT 1 cut(s) 121
MaeIII GTNAC 1 cut(s) 209
MboII GAAGA 1 cut(s) 410
MluCI AATT 3 cut(s) 192, 401, 438
MlyI GAGTC 2 cut(s) 13, 238
MmeI TCCRAC 1 cut(s) 98
MnlI CCTC 2 cut(s) 136, 184
MseI TTAA 3 cut(s) 195, 437, 487
MwoI GCNNNNNNNGC 3 cut(s) 221, 371, 440
NlaIII CATG 2 cut(s) 224, 394
NlaIV GGNNCC 1 cut(s) 72
NmuCI GTSAC 1 cut(s) 209
NspI RCATGY 2 cut(s) 224, 394
PciI ACATGT 1 cut(s) 390
PleI GAGTC 2 cut(s) 12, 237
PpsI GAGTC 2 cut(s) 12, 237
PscI ACATGT 1 cut(s) 390
PshBI ATTAAT 1 cut(s) 437
PsiI TTATAA 1 cut(s) 191
PspN4I GGNNCC 1 cut(s) 72
SaqAI TTAA 3 cut(s) 195, 437, 487
SchI GAGTC 2 cut(s) 13, 238
SetI ASST 7 cut(s) 55, 97, 124, 147, 189, 358, 417
SmlI CTYRAG 1 cut(s) 271
SmoI CTYRAG 1 cut(s) 271
SpeI ACTAGT 2 cut(s) 277, 368
Sse9I AATT 3 cut(s) 192, 401, 438
SspMI CTAG 3 cut(s) 278, 293, 369
TaiI ACGT 1 cut(s) 124
TaqI TCGA 2 cut(s) 227, 232
TasI AATT 3 cut(s) 192, 401, 438
Tru1I TTAA 3 cut(s) 195, 437, 487
Tru9I TTAA 3 cut(s) 195, 437, 487
TscAI CASTG 3 cut(s) 72, 183, 429
TseFI GTSAC 1 cut(s) 209
Tsp45I GTSAC 1 cut(s) 209
TspDTI ATGAA 7 cut(s) 72, 105, 180, 216, 302, 411, 472
TspGWI ACGGA 1 cut(s) 89
TspRI CASTG 3 cut(s) 72, 183, 429
VspI ATTAAT 1 cut(s) 437
XceI RCATGY 2 cut(s) 224, 394
XspI CTAG 3 cut(s) 278, 293, 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.