Rh6AG111500

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001771
Physical Location & Seq
Forward (+)
16482568 .. 16483841
1274 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG111500.1

Sequence Viewer

Length: 330 bp
ATGTTGGATTCTCCGCACATATCAAAATTTACAGACGCAGATAACACTCATGTTGGTTCTTTCAAGTTAGCACCTAGTGACCTAAATGAATGTCAACTGGCTCCAGCATCACCAAGTGATGACCCTGTCAGTGTCCGTCCTGATACTTCACGTCCTTCAAATGAGAACAGAGTGGTGGTGTTTGGGGGTAAAGATGAAATATCCTCACTGAACAAGGTTATAATTAAGGATGAAACTTGTGGTGCTACACATGCTTCTAGTCGAGTTGGCAGGGAGAAATTAGTATCTCCGAACAAGTGGGCTGTCTACTTAAGCAAGCCACTAGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

109

Amino Acids

11.78

Weight (kDa)

6.26

Isoelectric Point (pI)

47.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
AccI GTMKAC 1 cut(s) 306
AciI CCGC 1 cut(s) 14
AcsI RAATTY 1 cut(s) 26
AdeI CACNNNGTG 2 cut(s) 77, 116
AflII CTTAAG 1 cut(s) 310
AgsI TTSAA 2 cut(s) 64, 159
AhlI ACTAGT 1 cut(s) 322
AjiI CACGTC 1 cut(s) 152
ApoI RAATTY 1 cut(s) 26
AsuHPI GGTGA 1 cut(s) 102
BcuI ACTAGT 1 cut(s) 322
BfaI CTAG 3 cut(s) 75, 258, 323
BfrI CTTAAG 1 cut(s) 310
BmgBI CACGTC 1 cut(s) 152
BmiI GGNNCC 1 cut(s) 102
BmsI GCATC 1 cut(s) 116
BpmI CTGGAG 1 cut(s) 87
Bse1I ACTGG 1 cut(s) 102
BseGI GGATG 1 cut(s) 235
BseNI ACTGG 1 cut(s) 102
BspACI CCGC 1 cut(s) 14
BspLI GGNNCC 1 cut(s) 102
BspTI CTTAAG 1 cut(s) 310
BsrI ACTGG 1 cut(s) 102
BstAFI CTTAAG 1 cut(s) 310
BstC8I GCNNGC 1 cut(s) 317
BstF5I GGATG 1 cut(s) 235
BstMWI GCNNNNNNNGC 1 cut(s) 251
BstNSI RCATGY 1 cut(s) 254
BtrI CACGTC 1 cut(s) 152
BtsCI GGATG 1 cut(s) 235
BtsIMutI CAGTG 2 cut(s) 136, 206
Cac8I GCNNGC 1 cut(s) 317
CseI GACGC 1 cut(s) 44
CviAII CATG 2 cut(s) 50, 251
CviJI RGCY 3 cut(s) 101, 302, 319
CviKI_1 RGCY 3 cut(s) 101, 302, 319
DraIII CACNNNGTG 2 cut(s) 77, 116
FaeI CATG 2 cut(s) 53, 254
FaiI YATR 4 cut(s) 20, 51, 221, 252
FatI CATG 2 cut(s) 49, 250
FblI GTMKAC 1 cut(s) 306
FokI GGATG 1 cut(s) 242
FspBI CTAG 3 cut(s) 75, 258, 323
GsuI CTGGAG 1 cut(s) 87
HgaI GACGC 1 cut(s) 44
Hin1II CATG 2 cut(s) 53, 254
HincII GTYRAC 1 cut(s) 95
HindII GTYRAC 1 cut(s) 95
HinfI GANTC 1 cut(s) 8
HphI GGTGA 1 cut(s) 102
Hpy166II GTNNAC 2 cut(s) 95, 307
Hpy188I TCNGA 1 cut(s) 291
Hpy188III TCNNGA 1 cut(s) 140
Hpy8I GTNNAC 2 cut(s) 95, 307
HpyAV CCTTC 1 cut(s) 165
HpyCH4IV ACGT 1 cut(s) 151
HpyF10VI GCNNNNNNNGC 1 cut(s) 251
HpySE526I ACGT 1 cut(s) 151
Hsp92II CATG 2 cut(s) 53, 254
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 5 cut(s) 83, 117, 138, 153, 256
LweI GCATC 1 cut(s) 116
MaeI CTAG 3 cut(s) 75, 258, 323
MaeII ACGT 1 cut(s) 151
MaeIII GTNAC 1 cut(s) 77
MluCI AATT 3 cut(s) 26, 222, 278
MnlI CCTC 1 cut(s) 214
MseI TTAA 2 cut(s) 225, 311
MspCI CTTAAG 1 cut(s) 310
MwoI GCNNNNNNNGC 1 cut(s) 251
NlaIII CATG 2 cut(s) 53, 254
NlaIV GGNNCC 1 cut(s) 102
NmuCI GTSAC 1 cut(s) 77
NspI RCATGY 1 cut(s) 254
PfeI GAWTC 1 cut(s) 8
PflFI GACNNNGTC 1 cut(s) 125
PsiI TTATAA 1 cut(s) 221
PspN4I GGNNCC 1 cut(s) 102
PsyI GACNNNGTC 1 cut(s) 125
SaqAI TTAA 2 cut(s) 225, 311
SetI ASST 4 cut(s) 76, 84, 154, 219
SfaNI GCATC 1 cut(s) 116
SmlI CTYRAG 1 cut(s) 310
SmoI CTYRAG 1 cut(s) 310
SpeI ACTAGT 1 cut(s) 322
Sse9I AATT 3 cut(s) 26, 222, 278
SsiI CCGC 1 cut(s) 14
SspMI CTAG 3 cut(s) 75, 258, 323
TaiI ACGT 1 cut(s) 154
TaqI TCGA 1 cut(s) 262
TasI AATT 3 cut(s) 26, 222, 278
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 2 cut(s) 225, 311
Tru9I TTAA 2 cut(s) 225, 311
TscAI CASTG 2 cut(s) 136, 213
TseFI GTSAC 1 cut(s) 77
Tsp45I GTSAC 1 cut(s) 77
TspDTI ATGAA 3 cut(s) 102, 210, 246
TspGWI ACGGA 1 cut(s) 125
TspRI CASTG 2 cut(s) 136, 213
Tth111I GACNNNGTC 1 cut(s) 125
Vha464I CTTAAG 1 cut(s) 310
XapI RAATTY 1 cut(s) 26
XceI RCATGY 1 cut(s) 254
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 3 cut(s) 75, 258, 323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.