Rw6G009470

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
15883954 .. 15887698
3745 bp
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UTR
Exon/CDS
Intron
Rw6G009470.1

Sequence Viewer

Length: 1614 bp
ATGACTCCGCTCGACTCGCCGCCCTCAACTCCCTCCACCGCGCCATTCTCTACCCTCCCAACTCCCTCCTCGTCACTCACTCCGCCTCTTTCCTCGCCCAGGGCTTCTCTCAGCTTCTCTCCGATAAGCTGTTCGGCTGCCACTTATATATTCTTGCTTCAACACGGGAATAATGAAGTTGTTGAACAAGCACTGACTTCGTTAACAGAGGAGCTGGAGTTATTAGAAGGGATGCTAGAGAAATCTGTGGGCCATGATGATGGGGTTCTTGCATGTTCCAAAACATATTCAAAACGTGAATTGTTTGCATTGATTAAATTTGATTTGAAGGTTCTGCTATCATGTGTTTTCCTCAGTGGGGGTTGTAGTCCTAGTTTGATTGGCCAACCAGACATTGCAACCCTATATCTTATGAGGTCAGAAAAGTTGGTGAACTTTATTATTGAGAAAGTTAATCTTTTTTACTTGCCTATTATGGAATATGTGGATGTGCAAGTCAATGTTTTGAAGACATTTGACAGGCTAACAGTAGTTAAATTCTTAAGTACCTGCTCTTTGTCATATCAGAGTAGTGGAAAATCATCAATGGATGTTACCTCTGATAAATTACTTAATAGTGAGTCTTTGACGAATGAACATTCGGTTGTGGTTGTTGAGAATCTGAGAAAGTACAGTCTGTCTTTTGTGAAAGCTCTCCATGTCTCTTCTCCTTTTGCAGTTAAAGTAACTGCGCTGGGTTGGGTACAAAGATTTTGTGAGAATGTTATTGCTTTTAATGAGAAATCAGACACAGAATCTCGTTTCTATGAAGTGTATGGACAGTATGGTAATGATAGAATTATTGGGAACATGCTTTACTCAATTATGGATGCTGCATCTGATAGGGAACCAAAAGTCCTTGCAATAACTGAAGATCTACATGATGTTCACAGTCTAGGAAAGGAGGCTGCTGCAGTTCATCGTTCTCTTGTGGAAGACCTTTCAAAGGCAAATGGAATTCTTCTTCCACTGGAAACAGTATTGTCCAAAGATGTAGCTGCTATGACTGATGCTATGTGTAGGGAAAGAGTTACCAATATGGAAATATCTCCGATTCATGGACAAGCCATATACCAGTCCTATTCTTTAAAAATCAGGGAGGCTTGCCAGACCTTACATCCCTTGGTGTCCTCACTTACCTCATCTGTGAAGGGGCTCTATTCTATGTTGACCAGGCTTGCACGAACTGCAAGTCTTCATGCTGGGGATCTTCATAAAGCTCTTGAAGGACTAGGAGAAAGCCAGGAAGTAGAATCGCCAGTAACTGATGTATCAAGGCCAGATCTTGCTACTGATGCTGCTGGGTTTGATGACAAGGAGAGAGAGAACCTCTCCATGTCAAATGGTGAGAGCATCAAAGATTTTGTTGGCATTGGACTTCCTTTGGAAGATAAAGGATGGTTATCTCCACCAGATAGTATCTGCAGTAGTAGTACAGATTCTGGCATTTCCTTGCCTGAAATGAGTCTTCCAGTTAGCTTCAATGATCAAGAAGATAAAGCAATAGCTCTTGCACGGACCTGGTGGCAGAGATGCTATAGATTTTCAAAATACCACCCCTTACTCTCAAGCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

537

Amino Acids

58.96

Weight (kDa)

5.13

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 557
AccBSI CCGCTC 1 cut(s) 10
AccII CGCG 1 cut(s) 41
AciI CCGC 4 cut(s) 8, 20, 39, 83
AclWI GGATC 1 cut(s) 1254
AcoI YGGCCR 1 cut(s) 382
AcsI RAATTY 3 cut(s) 317, 536, 996
AcuI CTGAAG 1 cut(s) 930
AfaI GTAC 4 cut(s) 547, 671, 744, 1474
AfiI CCNNNNNNNGG 4 cut(s) 99, 358, 985, 1097
AflII CTTAAG 1 cut(s) 541
AgsI TTSAA 9 cut(s) 161, 185, 291, 328, 508, 984, 1265, 1522, 1587
AjnI CCWGG 4 cut(s) 98, 1211, 1281, 1559
AloI GAACNNNNNNTCC 2 cut(s) 879, 911
AluBI AGCT 9 cut(s) 114, 129, 214, 692, 1037, 1259, 1518, 1547, 1611
AluI AGCT 9 cut(s) 114, 129, 214, 692, 1037, 1259, 1518, 1547, 1611
Alw26I GTCTC 1 cut(s) 706
AlwI GGATC 1 cut(s) 1254
AlwNI CAGNNNCTG 2 cut(s) 1304, 1481
AoxI GGCC 3 cut(s) 250, 382, 1316
ApeKI GCWGC 6 cut(s) 137, 872, 947, 950, 1037, 1337
ApoI RAATTY 3 cut(s) 317, 536, 996
ArsI GACNNNNNNTTYG 2 cut(s) 1216, 1248
AspLEI GCGC 2 cut(s) 43, 733
AspS9I GGNCC 2 cut(s) 250, 1557
AsuHPI GGTGA 2 cut(s) 442, 1397
AvaII GGWCC 1 cut(s) 1557
BaeI ACNNNNGTAYC 2 cut(s) 1293, 1326
BalI TGGCCA 1 cut(s) 384
BanII GRGCYC 1 cut(s) 1197
BbsI GAAGAC 4 cut(s) 515, 981, 1226, 1499
BbvI GCAGC 6 cut(s) 124, 859, 934, 937, 1024, 1324
BccI CCATC 2 cut(s) 254, 1431
BcgI CGANNNNNNTGC 2 cut(s) 180, 214
BciT130I CCWGG 4 cut(s) 100, 1213, 1283, 1561
BclI TGATCA 1 cut(s) 1525
BcoDI GTCTC 1 cut(s) 706
BfaI CTAG 4 cut(s) 236, 372, 935, 1271
BfmI CTRYAG 3 cut(s) 951, 1462, 1576
BfrI CTTAAG 1 cut(s) 541
BfuAI ACCTGC 1 cut(s) 557
BglII AGATCT 2 cut(s) 913, 1321
BisI GCNGC 7 cut(s) 20, 138, 873, 948, 951, 1038, 1338
BlsI GCNGC 7 cut(s) 21, 139, 874, 949, 952, 1039, 1339
Bme1390I CCNGG 4 cut(s) 100, 1213, 1283, 1561
Bme18I GGWCC 1 cut(s) 1557
BmgT120I GGNCC 2 cut(s) 250, 1557
BmiI GGNNCC 1 cut(s) 888
BmrFI CCNGG 4 cut(s) 100, 1213, 1283, 1561
BmsI GCATC 7 cut(s) 222, 859, 884, 1039, 1324, 1401, 1562
BpiI GAAGAC 4 cut(s) 515, 981, 1226, 1499
BplI GAGNNNNNCTC 4 cut(s) 1353, 1385, 1355, 1387
BpmI CTGGAG 1 cut(s) 236
BpuEI CTTGAG 1 cut(s) 1591
BsaBI GATNNNNATC 1 cut(s) 1441
BsaJI CCNNGG 3 cut(s) 98, 99, 1161
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bsc4I CCNNNNNNNGG 4 cut(s) 99, 358, 985, 1097
Bse1I ACTGG 4 cut(s) 1014, 1114, 1298, 1511
Bse3DI GCAATG 1 cut(s) 393
Bse8I GATNNNNATC 1 cut(s) 1441
BseBI CCWGG 4 cut(s) 100, 1213, 1283, 1561
BseDI CCNNGG 3 cut(s) 98, 99, 1161
BseGI GGATG 6 cut(s) 237, 493, 595, 874, 1156, 1442
BseJI GATNNNNATC 1 cut(s) 1441
BseLI CCNNNNNNNGG 4 cut(s) 99, 358, 985, 1097
BseMI GCAATG 1 cut(s) 393
BseMII CTCAG 3 cut(s) 124, 367, 653
BseNI ACTGG 4 cut(s) 1014, 1114, 1298, 1511
BseRI GAGGAG 2 cut(s) 58, 224
BseXI GCAGC 6 cut(s) 124, 859, 934, 937, 1024, 1324
BseYI CCCAGC 3 cut(s) 733, 1241, 1340
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 3 cut(s) 252, 384, 1318
BslI CCNNNNNNNGG 4 cut(s) 99, 358, 985, 1097
BsmAI GTCTC 1 cut(s) 706
BsnI GGCC 3 cut(s) 252, 384, 1318
Bsp1286I GDGCHC 1 cut(s) 1197
Bsp143I GATC 4 cut(s) 913, 1246, 1321, 1525
BspACI CCGC 4 cut(s) 8, 20, 39, 83
BspANI GGCC 3 cut(s) 252, 384, 1318
BspCNI CTCAG 3 cut(s) 123, 366, 654
BspFNI CGCG 1 cut(s) 41
BspLI GGNNCC 1 cut(s) 888
BspMAI CTGCAG 2 cut(s) 955, 1466
BspMI ACCTGC 1 cut(s) 557
BspPI GGATC 1 cut(s) 1254
BspTI CTTAAG 1 cut(s) 541
BsrBI CCGCTC 1 cut(s) 10
BsrDI GCAATG 1 cut(s) 393
BsrI ACTGG 4 cut(s) 1014, 1114, 1298, 1511
BssECI CCNNGG 3 cut(s) 98, 99, 1161
BssMI GATC 4 cut(s) 913, 1246, 1321, 1525
BssT1I CCWWGG 1 cut(s) 1161
Bst2UI CCWGG 4 cut(s) 100, 1213, 1283, 1561
Bst4CI ACNGT 5 cut(s) 529, 674, 822, 932, 1018
Bst6I CTCTTC 1 cut(s) 709
BstAFI CTTAAG 1 cut(s) 541
BstAPI GCANNNNNTGC 1 cut(s) 1226
BstC8I GCNNGC 2 cut(s) 1144, 1218
BstDEI CTNAG 3 cut(s) 110, 353, 662
BstENI CCTNNNNNAGG 2 cut(s) 97, 983
BstF5I GGATG 6 cut(s) 237, 493, 595, 874, 1156, 1442
BstFNI CGCG 1 cut(s) 41
BstHHI GCGC 2 cut(s) 43, 733
BstKTI GATC 4 cut(s) 916, 1249, 1324, 1528
BstMAI GTCTC 1 cut(s) 706
BstMBI GATC 4 cut(s) 913, 1246, 1321, 1525
BstMWI GCNNNNNNNGC 3 cut(s) 16, 1226, 1334
BstNI CCWGG 4 cut(s) 100, 1213, 1283, 1561
BstNSI RCATGY 2 cut(s) 276, 853
BstSCI CCNGG 4 cut(s) 98, 1211, 1281, 1559
BstSFI CTRYAG 3 cut(s) 951, 1462, 1576
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 6 cut(s) 124, 859, 934, 937, 1024, 1324
BstV2I GAAGAC 4 cut(s) 515, 981, 1226, 1499
BstX2I RGATCY 3 cut(s) 913, 1246, 1321
BstXI CCANNNNNNTGG 1 cut(s) 260
BstYI RGATCY 3 cut(s) 913, 1246, 1321
BsuRI GGCC 3 cut(s) 252, 384, 1318
BtsCI GGATG 6 cut(s) 237, 493, 595, 874, 1156, 1442
BtsIMutI CAGTG 3 cut(s) 191, 361, 1007
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 2 cut(s) 1144, 1218
CaiI CAGNNNCTG 2 cut(s) 1304, 1481
CfoI GCGC 2 cut(s) 43, 733
Cfr13I GGNCC 2 cut(s) 250, 1557
CsiI ACCWGGT 1 cut(s) 1559
Csp6I GTAC 4 cut(s) 546, 670, 743, 1473
CviAII CATG 9 cut(s) 254, 273, 342, 698, 850, 920, 1097, 1238, 1375
CviQI GTAC 4 cut(s) 546, 670, 743, 1473
DdeI CTNAG 3 cut(s) 110, 353, 662
DpnI GATC 4 cut(s) 915, 1248, 1323, 1527
DpnII GATC 4 cut(s) 913, 1246, 1321, 1525
DraI TTTAAA 1 cut(s) 1128
EaeI YGGCCR 1 cut(s) 382
Eam1104I CTCTTC 1 cut(s) 709
EarI CTCTTC 1 cut(s) 709
EciI GGCGGA 1 cut(s) 72
Eco130I CCWWGG 1 cut(s) 1161
Eco24I GRGCYC 1 cut(s) 1197
Eco47I GGWCC 1 cut(s) 1557
Eco57I CTGAAG 1 cut(s) 930
EcoNI CCTNNNNNAGG 2 cut(s) 97, 983
EcoRI GAATTC 1 cut(s) 996
EcoRII CCWGG 4 cut(s) 98, 1211, 1281, 1559
EcoT14I CCWWGG 1 cut(s) 1161
EcoT38I GRGCYC 1 cut(s) 1197
ErhI CCWWGG 1 cut(s) 1161
FaeI CATG 9 cut(s) 257, 276, 345, 701, 853, 923, 1100, 1241, 1378
FalI AAGNNNNNCTT 2 cut(s) 441, 473
FatI CATG 9 cut(s) 253, 272, 341, 697, 849, 919, 1096, 1237, 1374
FbaI TGATCA 1 cut(s) 1525
Fnu4HI GCNGC 7 cut(s) 20, 138, 873, 948, 951, 1038, 1338
FokI GGATG 6 cut(s) 244, 500, 602, 881, 1143, 1449
FriOI GRGCYC 1 cut(s) 1197
Fsp4HI GCNGC 7 cut(s) 20, 138, 873, 948, 951, 1038, 1338
FspBI CTAG 4 cut(s) 236, 372, 935, 1271
GlaI GCGC 2 cut(s) 42, 732
GluI GCNGC 7 cut(s) 20, 138, 873, 948, 951, 1038, 1338
GsaI CCCAGC 3 cut(s) 737, 1245, 1344
GsuI CTGGAG 1 cut(s) 236
HaeIII GGCC 3 cut(s) 252, 384, 1318
HhaI GCGC 2 cut(s) 43, 733
Hin1II CATG 9 cut(s) 257, 276, 345, 701, 853, 923, 1100, 1241, 1378
Hin6I GCGC 2 cut(s) 41, 731
HinP1I GCGC 2 cut(s) 41, 731
HincII GTYRAC 2 cut(s) 204, 1209
HindII GTYRAC 2 cut(s) 204, 1209
HinfI GANTC 9 cut(s) 4, 14, 620, 658, 794, 1093, 1292, 1478, 1504
HpaI GTTAAC 1 cut(s) 204
HphI GGTGA 2 cut(s) 442, 1397
Hpy166II GTNNAC 4 cut(s) 204, 433, 928, 1209
Hpy188I TCNGA 8 cut(s) 123, 421, 567, 601, 663, 787, 880, 1092
Hpy188III TCNNGA 2 cut(s) 1262, 1529
Hpy8I GTNNAC 4 cut(s) 204, 433, 928, 1209
HpyAV CCTTC 4 cut(s) 221, 322, 1183, 1259
HpyCH4III ACNGT 5 cut(s) 529, 674, 822, 932, 1018
HpyCH4IV ACGT 1 cut(s) 295
HpyF10VI GCNNNNNNNGC 3 cut(s) 16, 1226, 1334
HpyF3I CTNAG 3 cut(s) 110, 353, 662
HpySE526I ACGT 1 cut(s) 295
Hsp92II CATG 9 cut(s) 257, 276, 345, 701, 853, 923, 1100, 1241, 1378
HspAI GCGC 2 cut(s) 41, 731
Ksp22I TGATCA 1 cut(s) 1525
KspAI GTTAAC 1 cut(s) 204
Kzo9I GATC 4 cut(s) 913, 1246, 1321, 1525
LmnI GCTCC 1 cut(s) 211
Lsp1109I GCAGC 6 cut(s) 124, 859, 934, 937, 1024, 1324
LweI GCATC 7 cut(s) 222, 859, 884, 1039, 1324, 1401, 1562
MabI ACCWGGT 1 cut(s) 1559
MaeI CTAG 4 cut(s) 236, 372, 935, 1271
MaeII ACGT 1 cut(s) 295
MaeIII GTNAC 5 cut(s) 72, 592, 724, 1069, 1300
MalI GATC 4 cut(s) 915, 1248, 1323, 1527
MbiI CCGCTC 1 cut(s) 10
MboI GATC 4 cut(s) 913, 1246, 1321, 1525
MflI RGATCY 3 cut(s) 913, 1246, 1321
MhlI GDGCHC 1 cut(s) 1197
MlsI TGGCCA 1 cut(s) 384
MluCI AATT 7 cut(s) 299, 317, 536, 605, 837, 861, 996
MluNI TGGCCA 1 cut(s) 384
MlyI GAGTC 3 cut(s) 8, 629, 1513
Mox20I TGGCCA 1 cut(s) 384
MscI TGGCCA 1 cut(s) 384
MseI TTAA 9 cut(s) 203, 315, 453, 534, 542, 612, 720, 774, 1127
MslI CAYNNNNRTG 1 cut(s) 258
Msp20I TGGCCA 1 cut(s) 384
MspCI CTTAAG 1 cut(s) 541
MspR9I CCNGG 4 cut(s) 100, 1213, 1283, 1561
MvaI CCWGG 4 cut(s) 100, 1213, 1283, 1561
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 3 cut(s) 16, 1226, 1334
NdeII GATC 4 cut(s) 913, 1246, 1321, 1525
NlaIII CATG 9 cut(s) 257, 276, 345, 701, 853, 923, 1100, 1241, 1378
NlaIV GGNNCC 1 cut(s) 888
NmuCI GTSAC 1 cut(s) 72
NspI RCATGY 2 cut(s) 276, 853
PasI CCCWGGG 1 cut(s) 99
PfeI GAWTC 5 cut(s) 658, 794, 1093, 1292, 1478
PkrI GCNGC 7 cut(s) 21, 139, 874, 949, 952, 1039, 1339
PleI GAGTC 3 cut(s) 8, 628, 1512
PpsI GAGTC 3 cut(s) 8, 628, 1512
Psp6I CCWGG 4 cut(s) 98, 1211, 1281, 1559
PspFI CCCAGC 3 cut(s) 733, 1241, 1340
PspGI CCWGG 4 cut(s) 98, 1211, 1281, 1559
PspN4I GGNNCC 1 cut(s) 888
PspPI GGNCC 2 cut(s) 250, 1557
PsrI GAACNNNNNNTAC 2 cut(s) 839, 871
PstI CTGCAG 2 cut(s) 955, 1466
PstNI CAGNNNCTG 2 cut(s) 1304, 1481
PsuI RGATCY 3 cut(s) 913, 1246, 1321
RsaI GTAC 4 cut(s) 547, 671, 744, 1474
RsaNI GTAC 4 cut(s) 546, 670, 743, 1473
RseI CAYNNNNRTG 1 cut(s) 258
SaqAI TTAA 9 cut(s) 203, 315, 453, 534, 542, 612, 720, 774, 1127
SatI GCNGC 7 cut(s) 20, 138, 873, 948, 951, 1038, 1338
Sau3AI GATC 4 cut(s) 913, 1246, 1321, 1525
Sau96I GGNCC 2 cut(s) 250, 1557
SchI GAGTC 3 cut(s) 8, 629, 1513
ScrFI CCNGG 4 cut(s) 100, 1213, 1283, 1561
SduI GDGCHC 1 cut(s) 1197
SexAI ACCWGGT 1 cut(s) 1559
SfaNI GCATC 7 cut(s) 222, 859, 884, 1039, 1324, 1401, 1562
SfcI CTRYAG 3 cut(s) 951, 1462, 1576
SinI GGWCC 1 cut(s) 1557
SmiMI CAYNNNNRTG 1 cut(s) 258
SmlI CTYRAG 2 cut(s) 541, 1606
SmoI CTYRAG 2 cut(s) 541, 1606
Sse9I AATT 7 cut(s) 299, 317, 536, 605, 837, 861, 996
SsiI CCGC 4 cut(s) 8, 20, 39, 83
SspMI CTAG 4 cut(s) 236, 372, 935, 1271
StyD4I CCNGG 4 cut(s) 98, 1211, 1281, 1559
StyI CCWWGG 1 cut(s) 1161
TaaI ACNGT 5 cut(s) 529, 674, 822, 932, 1018
TaiI ACGT 1 cut(s) 298
TaqI TCGA 1 cut(s) 12
TasI AATT 7 cut(s) 299, 317, 536, 605, 837, 861, 996
TatI WGTACW 2 cut(s) 669, 1472
TauI GCSGC 1 cut(s) 22
TfiI GAWTC 5 cut(s) 658, 794, 1093, 1292, 1478
Tru1I TTAA 9 cut(s) 203, 315, 453, 534, 542, 612, 720, 774, 1127
Tru9I TTAA 9 cut(s) 203, 315, 453, 534, 542, 612, 720, 774, 1127
TscAI CASTG 3 cut(s) 198, 361, 1014
TseFI GTSAC 1 cut(s) 72
TseI GCWGC 6 cut(s) 137, 872, 947, 950, 1037, 1337
Tsp45I GTSAC 1 cut(s) 72
TspDTI ATGAA 7 cut(s) 189, 648, 822, 947, 1085, 1226, 1241
TspGWI ACGGA 1 cut(s) 1570
TspRI CASTG 3 cut(s) 198, 361, 1014
Vha464I CTTAAG 1 cut(s) 541
VpaK11BI GGWCC 1 cut(s) 1557
XagI CCTNNNNNAGG 2 cut(s) 97, 983
XapI RAATTY 3 cut(s) 317, 536, 996
XceI RCATGY 2 cut(s) 276, 853
XspI CTAG 4 cut(s) 236, 372, 935, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.