Rh6CG101500

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0001771
Physical Location & Seq
Forward (+)
11280168 .. 11280782
615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG101500.1

Sequence Viewer

Length: 615 bp
ATGCTTGGGAGCTTGGTTGACCGCTTCATTGGTTGGGCGCTGCGAGAGTGTCTTAACGTTGGGGATGTTGGCGGGATCGAGAGATATGCTTTGTCGATTCTTAAAGCATGCCAAGTTCTTCTTGAGGATGAGAGAACCTCCTTGAGTCTGTTGCACCGCCTTCTCGGTGTTTTGACTTTGATTTCATTGAAGTTTTCTAGATACTTCCAACCTCATTTTCTTGACATTGTTGATCTGCTTCTCGGGTGGGCGTTGGTACTGGACCTTGCCGAATCGGAAAGAAGAATTATAATGGATAGTTTCTTACAGTTTCAGAATCATTGGGTGGGTAGTTTGCAGTTTTCTCTGGGATTGCTGTCGAAGTTTGTAGGAGACATGGATGTTTTGATTCAGGATGTAAATCATGGAACCCCACAACAATTCCGAAGGCTGCTCGCGTTACTTTCATGCTTTTCAACAGTATTGCAGTCCACTGCTTCTGGGTTGCTGGAAATGAATCTACTTGAACAAATTACTGAACCCCTTAACAGAATTATTCCTCGGTTGTTGGGATGTTTATCTATGGTTGGAAGGAGATTTGGGTGGAAGGGATTGGGGATTCATGGAAGTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

204

Amino Acids

22.94

Weight (kDa)

6.51

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 290
AccII CGCG 1 cut(s) 437
AciI CCGC 3 cut(s) 22, 72, 157
AclI AACGTT 1 cut(s) 57
AclWI GGATC 1 cut(s) 83
AfaI GTAC 1 cut(s) 258
AgsI TTSAA 3 cut(s) 190, 456, 506
AjuI GAANNNNNNNTTGG 2 cut(s) 201, 233
AluBI AGCT 1 cut(s) 12
AluI AGCT 1 cut(s) 12
Alw26I GTCTC 1 cut(s) 366
AlwI GGATC 1 cut(s) 83
Ama87I CYCGRG 1 cut(s) 242
ApeKI GCWGC 2 cut(s) 40, 430
AspLEI GCGC 1 cut(s) 40
AspS9I GGNCC 1 cut(s) 262
AvaI CYCGRG 1 cut(s) 242
AvaII GGWCC 1 cut(s) 262
BbvI GCAGC 2 cut(s) 27, 417
BcgI CGANNNNNNTGC 2 cut(s) 68, 102
BcoDI GTCTC 1 cut(s) 366
BfaI CTAG 1 cut(s) 198
BfoI RGCGCY 1 cut(s) 41
BisI GCNGC 2 cut(s) 41, 431
BlsI GCNGC 2 cut(s) 42, 432
Bme18I GGWCC 1 cut(s) 262
BmeT110I CYCGRG 1 cut(s) 242
BmgT120I GGNCC 1 cut(s) 262
BmiI GGNNCC 1 cut(s) 409
BplI GAGNNNNNCTC 2 cut(s) 122, 154
BpuEI CTTGAG 2 cut(s) 143, 163
BsaBI GATNNNNATC 2 cut(s) 399, 556
BsaJI CCNNGG 1 cut(s) 539
Bse1I ACTGG 1 cut(s) 264
Bse8I GATNNNNATC 2 cut(s) 399, 556
BseDI CCNNGG 1 cut(s) 539
BseGI GGATG 5 cut(s) 70, 133, 385, 400, 557
BseJI GATNNNNATC 2 cut(s) 399, 556
BseNI ACTGG 1 cut(s) 264
BseXI GCAGC 2 cut(s) 27, 417
Bsh1236I CGCG 1 cut(s) 437
BsiHKCI CYCGRG 1 cut(s) 242
BsmAI GTCTC 1 cut(s) 366
BsoBI CYCGRG 1 cut(s) 242
Bsp143I GATC 2 cut(s) 75, 232
BspACI CCGC 3 cut(s) 22, 72, 157
BspFNI CGCG 1 cut(s) 437
BspLI GGNNCC 1 cut(s) 409
BspPI GGATC 1 cut(s) 83
BsrI ACTGG 1 cut(s) 264
BssECI CCNNGG 1 cut(s) 539
BssMI GATC 2 cut(s) 75, 232
Bst4CI ACNGT 2 cut(s) 309, 460
BstC8I GCNNGC 2 cut(s) 109, 435
BstF5I GGATG 5 cut(s) 70, 133, 385, 400, 557
BstFNI CGCG 1 cut(s) 437
BstH2I RGCGCY 1 cut(s) 41
BstHHI GCGC 1 cut(s) 40
BstKTI GATC 2 cut(s) 78, 235
BstMAI GTCTC 1 cut(s) 366
BstMBI GATC 2 cut(s) 75, 232
BstNSI RCATGY 1 cut(s) 111
BstUI CGCG 1 cut(s) 437
BstV1I GCAGC 2 cut(s) 27, 417
BtsCI GGATG 5 cut(s) 70, 133, 385, 400, 557
BtsI GCAGTG 1 cut(s) 471
BtsIMutI CAGTG 1 cut(s) 471
Cac8I GCNNGC 2 cut(s) 109, 435
CfoI GCGC 1 cut(s) 40
Cfr13I GGNCC 1 cut(s) 262
Csp6I GTAC 1 cut(s) 257
CviAII CATG 5 cut(s) 108, 376, 404, 447, 602
CviJI RGCY 2 cut(s) 12, 430
CviKI_1 RGCY 2 cut(s) 12, 430
CviQI GTAC 1 cut(s) 257
DpnI GATC 2 cut(s) 77, 234
DpnII GATC 2 cut(s) 75, 232
Eco47I GGWCC 1 cut(s) 262
Eco88I CYCGRG 1 cut(s) 242
FaeI CATG 5 cut(s) 111, 379, 407, 450, 605
FaiI YATR 8 cut(s) 87, 109, 290, 377, 405, 448, 563, 603
FalI AAGNNNNNCTT 2 cut(s) 105, 137
FatI CATG 5 cut(s) 107, 375, 403, 446, 601
FauI CCCGC 1 cut(s) 65
Fnu4HI GCNGC 2 cut(s) 41, 431
FokI GGATG 5 cut(s) 77, 140, 392, 407, 564
Fsp4HI GCNGC 2 cut(s) 41, 431
FspBI CTAG 1 cut(s) 198
GlaI GCGC 1 cut(s) 39
GluI GCNGC 2 cut(s) 41, 431
HaeII RGCGCY 1 cut(s) 41
HhaI GCGC 1 cut(s) 40
Hin1II CATG 5 cut(s) 111, 379, 407, 450, 605
Hin6I GCGC 1 cut(s) 38
HinP1I GCGC 1 cut(s) 38
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HinfI GANTC 7 cut(s) 97, 145, 272, 316, 388, 496, 598
Hpy166II GTNNAC 2 cut(s) 19, 471
Hpy188I TCNGA 4 cut(s) 277, 315, 425, 614
Hpy188III TCNNGA 5 cut(s) 79, 122, 198, 221, 392
Hpy8I GTNNAC 2 cut(s) 19, 471
HpyAV CCTTC 4 cut(s) 170, 420, 564, 580
HpyCH4III ACNGT 2 cut(s) 309, 460
HpyCH4IV ACGT 1 cut(s) 57
HpyCH4V TGCA 3 cut(s) 154, 337, 466
HpySE526I ACGT 1 cut(s) 57
Hsp92II CATG 5 cut(s) 111, 379, 407, 450, 605
HspAI GCGC 1 cut(s) 38
Kzo9I GATC 2 cut(s) 75, 232
LmnI GCTCC 1 cut(s) 9
LpnPI CCDG 5 cut(s) 245, 332, 377, 465, 473
Lsp1109I GCAGC 2 cut(s) 27, 417
MaeI CTAG 1 cut(s) 198
MaeII ACGT 1 cut(s) 57
MaeIII GTNAC 1 cut(s) 438
MalI GATC 2 cut(s) 77, 234
MboI GATC 2 cut(s) 75, 232
MboII GAAGA 2 cut(s) 110, 294
MluCI AATT 4 cut(s) 285, 419, 510, 531
MlyI GAGTC 1 cut(s) 154
MmeI TCCRAC 2 cut(s) 232, 547
MnlI CCTC 4 cut(s) 118, 148, 222, 549
MseI TTAA 3 cut(s) 54, 102, 525
MslI CAYNNNNRTG 1 cut(s) 606
MvnI CGCG 1 cut(s) 437
NdeII GATC 2 cut(s) 75, 232
NlaIII CATG 5 cut(s) 111, 379, 407, 450, 605
NlaIV GGNNCC 1 cut(s) 409
NspI RCATGY 1 cut(s) 111
PaeI GCATGC 1 cut(s) 111
PfeI GAWTC 6 cut(s) 97, 272, 316, 388, 496, 598
PkrI GCNGC 2 cut(s) 42, 432
PleI GAGTC 1 cut(s) 153
PpsI GAGTC 1 cut(s) 153
PsiI TTATAA 1 cut(s) 290
Psp1406I AACGTT 1 cut(s) 57
PspN4I GGNNCC 1 cut(s) 409
PspPI GGNCC 1 cut(s) 262
RsaI GTAC 1 cut(s) 258
RsaNI GTAC 1 cut(s) 257
RseI CAYNNNNRTG 1 cut(s) 606
SaqAI TTAA 3 cut(s) 54, 102, 525
SatI GCNGC 2 cut(s) 41, 431
Sau3AI GATC 2 cut(s) 75, 232
Sau96I GGNCC 1 cut(s) 262
SchI GAGTC 1 cut(s) 154
SetI ASST 5 cut(s) 14, 60, 140, 214, 267
SinI GGWCC 1 cut(s) 262
SmiMI CAYNNNNRTG 1 cut(s) 606
SmlI CTYRAG 2 cut(s) 122, 142
SmoI CTYRAG 2 cut(s) 122, 142
SphI GCATGC 1 cut(s) 111
Sse9I AATT 4 cut(s) 285, 419, 510, 531
SsiI CCGC 3 cut(s) 22, 72, 157
SspMI CTAG 1 cut(s) 198
TaaI ACNGT 2 cut(s) 309, 460
TaiI ACGT 1 cut(s) 60
TaqI TCGA 3 cut(s) 78, 95, 359
TasI AATT 4 cut(s) 285, 419, 510, 531
TfiI GAWTC 6 cut(s) 97, 272, 316, 388, 496, 598
Tru1I TTAA 3 cut(s) 54, 102, 525
Tru9I TTAA 3 cut(s) 54, 102, 525
TscAI CASTG 1 cut(s) 478
TseI GCWGC 2 cut(s) 40, 430
TspDTI ATGAA 5 cut(s) 16, 174, 435, 509, 590
TspRI CASTG 1 cut(s) 478
VpaK11BI GGWCC 1 cut(s) 262
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 1 cut(s) 111
XspI CTAG 1 cut(s) 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.