Rmu_sc0004865.1_g000013

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004865.1
Physical Location & Seq
Reverse (-)
40665 .. 42210
1546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004865.1_g000013.1.cds

Sequence Viewer

Length: 546 bp
atgttggattctccgcacatatcaaaatttacagacgcagataacactcatgttggttctttcaagttagcacctagtgacctaaatgaatatcaactggctccagcatcaccaagtgctgaccctgtcagtgtccgtcctgatacttcacgtccttcaaatgagaacagagaggtggtgtttgggggtaaagatgaaatatcctcactgaacaagattataattaaggatgaaacttgtgatgctacacatgcttctagtcgagttggcaggggtaaaaacccttatgcaatgtcagtcttgagacgagttgagatgaaactagatggtcgagatatatctgacaacagagaaattagtatctccgaacaaatgggctgtctacttaagcaagccactagtgtagacaatctttgcaacatgtatgaagggttggttaatccgtttttgccttgcaaagtcagagaattgagaatggagcctcttacgctgggcaaggcattaattgcttcagcaatcccatctctttggcttcgcatctcctga
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

181

Amino Acids

19.93

Weight (kDa)

5.94

Isoelectric Point (pI)

48.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
AccI GTMKAC 2 cut(s) 382, 405
AciI CCGC 1 cut(s) 14
AcsI RAATTY 1 cut(s) 26
AcuI CTGAAG 1 cut(s) 495
AdeI CACNNNGTG 2 cut(s) 77, 116
AflII CTTAAG 1 cut(s) 386
AflIII ACRYGT 1 cut(s) 420
AgsI TTSAA 2 cut(s) 64, 159
AhlI ACTAGT 1 cut(s) 398
AjiI CACGTC 1 cut(s) 152
Alw26I GTCTC 1 cut(s) 298
ApoI RAATTY 1 cut(s) 26
ArsI GACNNNNNNTTYG 2 cut(s) 364, 396
AseI ATTAAT 1 cut(s) 503
AsuHPI GGTGA 1 cut(s) 102
BccI CCATC 2 cut(s) 320, 529
BcoDI GTCTC 1 cut(s) 298
BcuI ACTAGT 1 cut(s) 398
BfaI CTAG 4 cut(s) 75, 258, 323, 399
BfrI CTTAAG 1 cut(s) 386
BmgBI CACGTC 1 cut(s) 152
BmiI GGNNCC 2 cut(s) 102, 480
BmsI GCATC 2 cut(s) 116, 232
BpmI CTGGAG 1 cut(s) 87
BpuEI CTTGAG 1 cut(s) 322
Bse1I ACTGG 1 cut(s) 102
Bse3DI GCAATG 1 cut(s) 297
BseGI GGATG 1 cut(s) 235
BseMI GCAATG 1 cut(s) 297
BseNI ACTGG 1 cut(s) 102
BseYI CCCAGC 1 cut(s) 490
BsmAI GTCTC 1 cut(s) 298
BsmBI CGTCTC 1 cut(s) 298
BspACI CCGC 1 cut(s) 14
BspLI GGNNCC 2 cut(s) 102, 480
BspTI CTTAAG 1 cut(s) 386
BsrDI GCAATG 1 cut(s) 297
BsrI ACTGG 1 cut(s) 102
BstAFI CTTAAG 1 cut(s) 386
BstAPI GCANNNNNTGC 1 cut(s) 506
BstC8I GCNNGC 1 cut(s) 393
BstF5I GGATG 1 cut(s) 235
BstMAI GTCTC 1 cut(s) 298
BstMWI GCNNNNNNNGC 3 cut(s) 251, 487, 506
BstNSI RCATGY 2 cut(s) 254, 424
BstXI CCANNNNNNTGG 1 cut(s) 528
BtrI CACGTC 1 cut(s) 152
BtsCI GGATG 1 cut(s) 235
BtsIMutI CAGTG 2 cut(s) 136, 206
Cac8I GCNNGC 1 cut(s) 393
CseI GACGC 1 cut(s) 44
CviAII CATG 3 cut(s) 50, 251, 421
CviJI RGCY 5 cut(s) 101, 378, 395, 481, 532
CviKI_1 RGCY 5 cut(s) 101, 378, 395, 481, 532
DraIII CACNNNGTG 2 cut(s) 77, 116
Eco57I CTGAAG 1 cut(s) 495
Esp3I CGTCTC 1 cut(s) 298
FaeI CATG 3 cut(s) 53, 254, 424
FaiI YATR 8 cut(s) 20, 51, 221, 252, 288, 338, 422, 426
FatI CATG 3 cut(s) 49, 250, 420
FblI GTMKAC 2 cut(s) 382, 405
FokI GGATG 1 cut(s) 242
FspBI CTAG 4 cut(s) 75, 258, 323, 399
GsaI CCCAGC 1 cut(s) 494
GsuI CTGGAG 1 cut(s) 87
HgaI GACGC 1 cut(s) 44
Hin1II CATG 3 cut(s) 53, 254, 424
HinfI GANTC 1 cut(s) 8
HphI GGTGA 1 cut(s) 102
Hpy166II GTNNAC 2 cut(s) 383, 406
Hpy188I TCNGA 3 cut(s) 343, 367, 464
Hpy188III TCNNGA 4 cut(s) 140, 301, 332, 543
Hpy8I GTNNAC 2 cut(s) 383, 406
HpyAV CCTTC 2 cut(s) 165, 422
HpyCH4IV ACGT 1 cut(s) 151
HpyCH4V TGCA 3 cut(s) 290, 417, 456
HpyF10VI GCNNNNNNNGC 3 cut(s) 251, 487, 506
HpySE526I ACGT 1 cut(s) 151
Hsp92II CATG 3 cut(s) 53, 254, 424
LmnI GCTCC 2 cut(s) 106, 478
LpnPI CCDG 6 cut(s) 83, 117, 138, 153, 256, 476
LweI GCATC 2 cut(s) 116, 232
MaeI CTAG 4 cut(s) 75, 258, 323, 399
MaeII ACGT 1 cut(s) 151
MaeIII GTNAC 1 cut(s) 77
MluCI AATT 5 cut(s) 26, 222, 354, 467, 504
MnlI CCTC 3 cut(s) 166, 214, 492
MseI TTAA 4 cut(s) 225, 387, 438, 503
MspCI CTTAAG 1 cut(s) 386
MwoI GCNNNNNNNGC 3 cut(s) 251, 487, 506
NlaIII CATG 3 cut(s) 53, 254, 424
NlaIV GGNNCC 2 cut(s) 102, 480
NmuCI GTSAC 1 cut(s) 77
NspI RCATGY 2 cut(s) 254, 424
PciI ACATGT 1 cut(s) 420
PfeI GAWTC 1 cut(s) 8
PflFI GACNNNGTC 1 cut(s) 125
PscI ACATGT 1 cut(s) 420
PshBI ATTAAT 1 cut(s) 503
PsiI TTATAA 1 cut(s) 221
PspFI CCCAGC 1 cut(s) 490
PspN4I GGNNCC 2 cut(s) 102, 480
PsyI GACNNNGTC 1 cut(s) 125
SaqAI TTAA 4 cut(s) 225, 387, 438, 503
SetI ASST 4 cut(s) 76, 84, 154, 177
SfaNI GCATC 2 cut(s) 116, 232
SmlI CTYRAG 2 cut(s) 301, 386
SmoI CTYRAG 2 cut(s) 301, 386
SpeI ACTAGT 1 cut(s) 398
Sse9I AATT 5 cut(s) 26, 222, 354, 467, 504
SsiI CCGC 1 cut(s) 14
SspMI CTAG 4 cut(s) 75, 258, 323, 399
TaiI ACGT 1 cut(s) 154
TaqI TCGA 2 cut(s) 262, 331
TasI AATT 5 cut(s) 26, 222, 354, 467, 504
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 4 cut(s) 225, 387, 438, 503
Tru9I TTAA 4 cut(s) 225, 387, 438, 503
TscAI CASTG 2 cut(s) 136, 213
TseFI GTSAC 1 cut(s) 77
Tsp45I GTSAC 1 cut(s) 77
TspDTI ATGAA 5 cut(s) 102, 210, 246, 332, 441
TspGWI ACGGA 2 cut(s) 125, 432
TspRI CASTG 2 cut(s) 136, 213
Tth111I GACNNNGTC 1 cut(s) 125
Vha464I CTTAAG 1 cut(s) 386
VspI ATTAAT 1 cut(s) 503
XapI RAATTY 1 cut(s) 26
XceI RCATGY 2 cut(s) 254, 424
XmiI GTMKAC 2 cut(s) 382, 405
XspI CTAG 4 cut(s) 75, 258, 323, 399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.