Rh6AG109000

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001771
Physical Location & Seq
Forward (+)
15854469 .. 15857591
3123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG109000.1

Sequence Viewer

Length: 354 bp
ATGTTGGATTCTCCGCACAGATCAAAATTTACAGAAGCAGATAACACTCATATTGGTTCTTTCAAGTCAACATCTGATGAATATCCACTGGCTCCAACATCACCAAGTGATGAACCTGTCAGTGTCTGTCCTGATACTCCACGTCCTTCAAACGGTAACAGAGAGGTGGTGTTTGGGGGTAAAGATGAAATATCCTCACTGAACAAGGTTATAATTAAAGATGAAACTCGTGACGCTACACATGCTTCGAGTCGAGTGGGCAGGGAAGTACTTGAAGTTGAAGATTTCTCTATCTTTGATCTACACTTGATGAAGATTTCGAGTCATGTCTGTGCTGGTGGATATATGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006401 GO:0006402 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0019637 GO:0030258 GO:0031323 GO:0031974 GO:0031981 GO:0032204 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034655 GO:0036211 GO:0042162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046486 GO:0046488 GO:0046700 GO:0046777 GO:0046834 GO:0046854 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140096 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901575 GO:2001020
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
FATC PI3_PI4_kinase SMG1 WD40

Protein Analysis

117

Amino Acids

12.85

Weight (kDa)

5.01

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 212
AciI CCGC 1 cut(s) 14
AcsI RAATTY 1 cut(s) 26
AdeI CACNNNGTG 1 cut(s) 107
AfaI GTAC 1 cut(s) 270
AfiI CCNNNNNNNGG 1 cut(s) 152
AgsI TTSAA 4 cut(s) 64, 150, 275, 281
AjiI CACGTC 1 cut(s) 143
AlwNI CAGNNNCTG 1 cut(s) 126
ApoI RAATTY 1 cut(s) 26
AsuHPI GGTGA 1 cut(s) 93
BauI CACGAG 1 cut(s) 228
BmcAI AGTACT 1 cut(s) 270
BmgBI CACGTC 1 cut(s) 143
BmiI GGNNCC 1 cut(s) 93
BsaBI GATNNNNATC 1 cut(s) 81
Bsc4I CCNNNNNNNGG 1 cut(s) 152
Bse1I ACTGG 1 cut(s) 93
Bse8I GATNNNNATC 1 cut(s) 81
BseJI GATNNNNATC 1 cut(s) 81
BseLI CCNNNNNNNGG 1 cut(s) 152
BseNI ACTGG 1 cut(s) 93
BslI CCNNNNNNNGG 1 cut(s) 152
Bsp143I GATC 2 cut(s) 20, 298
BspACI CCGC 1 cut(s) 14
BspLI GGNNCC 1 cut(s) 93
BsrI ACTGG 1 cut(s) 93
BssMI GATC 2 cut(s) 20, 298
BssSI CACGAG 1 cut(s) 228
Bst2BI CACGAG 1 cut(s) 228
Bst4CI ACNGT 1 cut(s) 155
BstKTI GATC 2 cut(s) 23, 301
BstMBI GATC 2 cut(s) 20, 298
BstMWI GCNNNNNNNGC 1 cut(s) 242
BstNSI RCATGY 1 cut(s) 245
BtrI CACGTC 1 cut(s) 143
BtsIMutI CAGTG 3 cut(s) 86, 127, 197
CaiI CAGNNNCTG 1 cut(s) 126
CseI GACGC 1 cut(s) 242
Csp6I GTAC 1 cut(s) 269
CviAII CATG 2 cut(s) 242, 326
CviJI RGCY 1 cut(s) 92
CviKI_1 RGCY 1 cut(s) 92
CviQI GTAC 1 cut(s) 269
DpnI GATC 2 cut(s) 22, 300
DpnII GATC 2 cut(s) 20, 298
DraIII CACNNNGTG 1 cut(s) 107
FaeI CATG 2 cut(s) 245, 329
FaiI YATR 6 cut(s) 51, 212, 243, 327, 345, 347
FatI CATG 2 cut(s) 241, 325
HgaI GACGC 1 cut(s) 242
Hin1II CATG 2 cut(s) 245, 329
HincII GTYRAC 1 cut(s) 69
HindII GTYRAC 1 cut(s) 69
HinfI GANTC 3 cut(s) 8, 250, 322
HphI GGTGA 1 cut(s) 93
Hpy166II GTNNAC 1 cut(s) 69
Hpy188I TCNGA 1 cut(s) 76
Hpy188III TCNNGA 2 cut(s) 131, 230
Hpy8I GTNNAC 1 cut(s) 69
HpyAV CCTTC 1 cut(s) 156
HpyCH4III ACNGT 1 cut(s) 155
HpyCH4IV ACGT 1 cut(s) 142
HpyF10VI GCNNNNNNNGC 1 cut(s) 242
HpySE526I ACGT 1 cut(s) 142
Hsp92II CATG 2 cut(s) 245, 329
Kzo9I GATC 2 cut(s) 20, 298
LmnI GCTCC 1 cut(s) 97
LpnPI CCDG 5 cut(s) 74, 129, 144, 247, 321
MaeII ACGT 1 cut(s) 142
MaeIII GTNAC 2 cut(s) 155, 230
MalI GATC 2 cut(s) 22, 300
MboI GATC 2 cut(s) 20, 298
MboII GAAGA 2 cut(s) 293, 325
MluCI AATT 2 cut(s) 26, 213
MlyI GAGTC 2 cut(s) 259, 331
MmeI TCCRAC 1 cut(s) 119
MnlI CCTC 2 cut(s) 157, 205
MseI TTAA 1 cut(s) 216
MslI CAYNNNNRTG 1 cut(s) 330
MwoI GCNNNNNNNGC 1 cut(s) 242
NdeII GATC 2 cut(s) 20, 298
NlaIII CATG 2 cut(s) 245, 329
NlaIV GGNNCC 1 cut(s) 93
NmuCI GTSAC 1 cut(s) 230
NspI RCATGY 1 cut(s) 245
PfeI GAWTC 1 cut(s) 8
PleI GAGTC 2 cut(s) 258, 330
PpsI GAGTC 2 cut(s) 258, 330
PsiI TTATAA 1 cut(s) 212
PspN4I GGNNCC 1 cut(s) 93
PstNI CAGNNNCTG 1 cut(s) 126
RsaI GTAC 1 cut(s) 270
RsaNI GTAC 1 cut(s) 269
RseI CAYNNNNRTG 1 cut(s) 330
SaqAI TTAA 1 cut(s) 216
Sau3AI GATC 2 cut(s) 20, 298
ScaI AGTACT 1 cut(s) 270
SchI GAGTC 2 cut(s) 259, 331
SetI ASST 4 cut(s) 118, 145, 168, 210
SmiMI CAYNNNNRTG 1 cut(s) 330
Sse9I AATT 2 cut(s) 26, 213
SsiI CCGC 1 cut(s) 14
TaaI ACNGT 1 cut(s) 155
TaiI ACGT 1 cut(s) 145
TaqI TCGA 3 cut(s) 248, 253, 320
TasI AATT 2 cut(s) 26, 213
TatI WGTACW 1 cut(s) 268
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 1 cut(s) 216
Tru9I TTAA 1 cut(s) 216
TscAI CASTG 3 cut(s) 93, 127, 204
TseFI GTSAC 1 cut(s) 230
Tsp45I GTSAC 1 cut(s) 230
TspDTI ATGAA 5 cut(s) 93, 126, 201, 237, 326
TspRI CASTG 3 cut(s) 93, 127, 204
XapI RAATTY 1 cut(s) 26
XceI RCATGY 1 cut(s) 245
ZrmI AGTACT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.