Rmu_sc0006058.1_g000005

B3 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006058.1
OG0000561
Physical Location & Seq
Forward (+)
17639 .. 22370
4732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006058.1_g000005.1.cds

Sequence Viewer

Length: 1806 bp
atgatttttgaacaggaagtttctagtgatcctcagaggaatggaggctgcaaacggagtcgaaccaacccgtccatgtcctggcattttggccatcctgaagagtcttctgtcaaaagccaagttagagaaatcccagagaatctagaagccgaatgtcccttctttatgaagtccatgatacgatcaaatatttccgtttgctttatgctgacactgcctaggagattctgcaacttgcatttacctttgcatggtacagcaacgataacattggaagataaagaggggaaagaatatgaaacaaaatttcttgcggacaaaaggacgctgagtggtggatggaaaggattttgtcaggcaaaagacttgcgtcttgatgatgttctagttttccagttggttagccatttgaagttcaaggtgtacagagtgagaccagaatatgatccaagtgaagatgatgtagatgcagcttttgtcctcttgaaaatgagtacctctgaacaaacactgtttgaggaaaaccctgcaaacctgacaaactattcatttgtagatgatgatgagtctgaggatcagattacagagataaggaatttggctccaatcacggtggtgcatttaatccggccaggacaagctgctgattttgaagatgttagaagttctgagaatttcgccacgatggccccgccccattctccgatgggccactctacccaaaacaacgccgcacttctctctaacctcagcatcggaccccacttcacccaaaacgagatcgagactccacgccggcgacatcaaccctcgattcctgacccgaagactattttggtgaccggcaacaaaggaagaggatccacatcgctcgacccaagacctccgataacagacctctggtgctcgacccaggacctccggcgctcgacctccggtgctcgacccagctctccggcgctcgactcaggccagtgtggtgtgacgagtcaaactcacaaggaactggagagggagttgtcggagagtcaaggttatgggtatagttgtgggctgggttctggatcgggcaccaagtcgggatctttggctttaggagtcacgggagtggcgaccgacaagggattgggagtggtgaggggagttaacggggcaaaggatgggggtggactgaaaagacatggtggtcttctcgccgttgtgggagtcgcagaaggggctttggacgtttgtctagctttctgtagaggtgataatggattgggagtggtgaggggagttaacggggcaaaggatgggggtggactgaaaagacatggtggtcttctcaccgttgttggagtcgcagaaggggctttggacgtagtagattgggcgataggggaattgagtttggggttatggtctacactaacggcggaccaccgatgcccctcccatttcagccaccagagctcacctaacgagcatggccaggaaaagtataacattggccaattcggtaatcccctaggtggtgacgtggcagagctcctcagggctctctgtctgtctcaggaattcatgaatctggaggagaatttcttccagtatttcccggaagacgaagggcacacgaccttccccgagctccctgtccctactacttcaactccatttgacgatttcacccttcatccggtggagcagcacagagggacattggaggagacaacccaaaatgggttcaggccttggaagtggaaaagtccattgagtccaattcccaagagagtgagtgagaacccttttccgtactattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

601

Amino Acids

65.85

Weight (kDa)

5.54

Isoelectric Point (pI)

49.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000561)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330
malus_domestica MD05G1077500.v1.1 MD10G1092700.v1.1
prunus_persica Prupe.8G122500_v2.0.a1 Prupe.8G122500_v2.0.a1 Prupe.8G122500_v2.0.a1
pyrus_communis pycom10g07620
rosa_chinensis RchiOBHm_Chr2g0147541 RchiOBHm_Chr2g0168211 RchiOBHm_Chr6g0256791 RchiOBHm_Chr6g0258071 RchiOBHm_Chr6g0258081 RchiOBHm_Chr6g0258121 RchiOBHm_Chr6g0258181 RchiOBHm_Chr6g0258201 RchiOBHm_Chr6g0258211
rosa_laevigata RLG00000014639 RLG00000014642 RLG00000014647
rosa_multiflora Rmu_sc0006058.1_g000005 Rmu_sc0007933.1_g000012
rosa_roxburghii Rroxscaffold_7G00205330 Rroxscaffold_7G00205340 Rroxscaffold_7G00208080 Rroxscaffold_7G00208100 Rroxscaffold_7G00208160
rosa_rugosa Rorug05G0578100 Rorug05G0578200 Rorug05G0578300 Rorug05G0578400 Rorug05G0578400 Rorug05G0578500 Rorug05G0578600 Rorug05G0578700 Rorug05G0578800 Rorug05G0578900 Rorug05G0579000 Rorug05G0579300 Rorug05G0579300 Rorug05G0579400
rosa_samantha Rh2BG613900 Rh4BG034900 Rh6AG096700 Rh6AG097000 Rh6AG097100 Rh6AG097300 Rh6BG087600 Rh6BG088200 Rh6BG088300 Rh6CG083700 Rh6CG083900 Rh6CG084000 Rh6CG084200 Rh6DG079500 Rh6DG080000 Rh6DG080200 Rh6DG080400 Rh6DG164000 Rh7BG391100 Rh7CG434700 Rh7CG467700
rosa_wichuraiana Rw0G021370 Rw0G021380 Rw6G008220 Rw6G008240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1188, 1323
AccB1I GGYRCC 1 cut(s) 1073
AccB7I CCANNNNNTGG 1 cut(s) 81
AccI GTMKAC 1 cut(s) 1409
AciI CCGC 4 cut(s) 317, 695, 735, 1421
AclWI GGATC 7 cut(s) 23, 443, 585, 858, 871, 1075, 1093
AcoI YGGCCR 4 cut(s) 91, 632, 1474, 1495
AcsI RAATTY 5 cut(s) 308, 598, 676, 1562, 1582
AcuI CTGAAG 1 cut(s) 120
AfaI GTAC 4 cut(s) 259, 428, 499, 1799
AfiI CCNNNNNNNGG 5 cut(s) 81, 254, 1517, 1681, 1725
AgsI TTSAA 6 cut(s) 11, 415, 421, 490, 656, 1653
AjiI CACGTC 1 cut(s) 1525
AjnI CCWGG 4 cut(s) 80, 634, 915, 1476
AjuI GAANNNNNNNTTGG 2 cut(s) 821, 853
AleI CACNNNNGTG 2 cut(s) 617, 1109
AluBI AGCT 7 cut(s) 476, 644, 954, 1241, 1458, 1534, 1633
AluI AGCT 7 cut(s) 476, 644, 954, 1241, 1458, 1534, 1633
Alw21I GWGCWC 5 cut(s) 911, 946, 1460, 1536, 1635
Alw26I GTCTC 4 cut(s) 430, 782, 1560, 1706
AlwI GGATC 7 cut(s) 23, 443, 585, 858, 871, 1075, 1093
Ama87I CYCGRG 1 cut(s) 1628
AoxI GGCC 8 cut(s) 91, 632, 690, 712, 973, 1474, 1495, 1733
ApeKI GCWGC 4 cut(s) 48, 473, 644, 1690
ApoI RAATTY 5 cut(s) 308, 598, 676, 1562, 1582
Asp700I GAANNNNTTC 1 cut(s) 1586
AspA2I CCTAGG 2 cut(s) 221, 1513
AspLEI GCGC 2 cut(s) 930, 964
AspS9I GGNCC 5 cut(s) 691, 712, 761, 919, 1423
AsuC2I CCSGG 1 cut(s) 1601
AsuHPI GGTGA 9 cut(s) 763, 853, 1150, 1265, 1285, 1324, 1452, 1532, 1663
AvaI CYCGRG 1 cut(s) 1628
AvaII GGWCC 3 cut(s) 761, 919, 1423
AvrII CCTAGG 2 cut(s) 221, 1513
AxyI CCTNAGG 1 cut(s) 1538
BaeGI GKGCMC 2 cut(s) 1076, 1617
BalI TGGCCA 3 cut(s) 93, 1476, 1497
BamHI GGATCC 1 cut(s) 863
BanI GGYRCC 1 cut(s) 1073
BanII GRGCYC 4 cut(s) 1460, 1536, 1546, 1635
BbsI GAAGAC 5 cut(s) 99, 836, 1184, 1319, 1611
Bbv12I GWGCWC 5 cut(s) 911, 946, 1460, 1536, 1635
BbvCI CCTCAGC 1 cut(s) 752
BbvI GCAGC 4 cut(s) 35, 485, 631, 1702
BccI CCATC 6 cut(s) 102, 336, 682, 703, 1157, 1292
BceAI ACGGC 2 cut(s) 1184, 1434
BciT130I CCWGG 4 cut(s) 82, 636, 917, 1478
BcnI CCSGG 1 cut(s) 1601
BcoDI GTCTC 4 cut(s) 430, 782, 1560, 1706
BfaI CTAG 6 cut(s) 24, 146, 222, 389, 1238, 1514
BfmI CTRYAG 1 cut(s) 1246
BfoI RGCGCY 2 cut(s) 931, 965
BglI GCCNNNNNGGC 1 cut(s) 689
BisI GCNGC 5 cut(s) 49, 474, 645, 735, 1691
BlnI CCTAGG 2 cut(s) 221, 1513
BlsI GCNGC 5 cut(s) 50, 475, 646, 736, 1692
Bme1390I CCNGG 5 cut(s) 82, 636, 917, 1478, 1601
Bme18I GGWCC 3 cut(s) 761, 919, 1423
BmeT110I CYCGRG 1 cut(s) 1628
BmgBI CACGTC 1 cut(s) 1525
BmgT120I GGNCC 5 cut(s) 691, 712, 761, 919, 1423
BmiI GGNNCC 5 cut(s) 606, 693, 763, 865, 1075
BmrFI CCNGG 5 cut(s) 82, 636, 917, 1478, 1601
BmsI GCATC 3 cut(s) 460, 765, 1421
BoxI GACNNNNGTC 2 cut(s) 372, 1233
BpiI GAAGAC 5 cut(s) 99, 836, 1184, 1319, 1611
BplI GAGNNNNNCTC 2 cut(s) 982, 1014
BpmI CTGGAG 2 cut(s) 1031, 1595
Bpu10I CCTNAGC 1 cut(s) 752
BpuMI CCSGG 1 cut(s) 1601
BsaBI GATNNNNATC 1 cut(s) 868
BsaI GGTCTC 1 cut(s) 430
BsaJI CCNNGG 4 cut(s) 221, 915, 1513, 1736
BsaWI WCCGGW 2 cut(s) 938, 1681
BsaXI ACNNNNNCTCC 4 cut(s) 1004, 1034, 1639, 1669
Bsc4I CCNNNNNNNGG 5 cut(s) 81, 254, 1517, 1681, 1725
Bse118I RCCGGY 2 cut(s) 798, 845
Bse1I ACTGG 4 cut(s) 397, 976, 1014, 1591
Bse21I CCTNAGG 1 cut(s) 1538
Bse8I GATNNNNATC 1 cut(s) 868
BseBI CCWGG 4 cut(s) 82, 636, 917, 1478
BseDI CCNNGG 4 cut(s) 221, 915, 1513, 1736
BseGI GGATG 5 cut(s) 94, 347, 1168, 1303, 1678
BseJI GATNNNNATC 1 cut(s) 868
BseLI CCNNNNNNNGG 5 cut(s) 81, 254, 1517, 1681, 1725
BseMII CTCAG 8 cut(s) 47, 323, 564, 663, 766, 984, 1552, 1571
BseNI ACTGG 4 cut(s) 397, 976, 1014, 1591
BseRI GAGGAG 3 cut(s) 1526, 1592, 1724
BseSI GKGCMC 2 cut(s) 1076, 1617
BseXI GCAGC 4 cut(s) 35, 485, 631, 1702
BseYI CCCAGC 2 cut(s) 950, 1057
Bsh1285I CGRYCG 1 cut(s) 1119
BshFI GGCC 8 cut(s) 93, 634, 692, 714, 975, 1476, 1497, 1735
BshNI GGYRCC 1 cut(s) 1073
BsiEI CGRYCG 1 cut(s) 1119
BsiHKAI GWGCWC 5 cut(s) 911, 946, 1460, 1536, 1635
BsiHKCI CYCGRG 1 cut(s) 1628
BsiSI CCGG 8 cut(s) 631, 799, 846, 925, 939, 959, 1601, 1682
BslFI GGGAC 3 cut(s) 144, 1625, 1714
BslI CCNNNNNNNGG 5 cut(s) 81, 254, 1517, 1681, 1725
BsmAI GTCTC 4 cut(s) 430, 782, 1560, 1706
BsmFI GGGAC 3 cut(s) 144, 1625, 1714
BsnI GGCC 8 cut(s) 93, 634, 692, 714, 975, 1476, 1497, 1735
Bso31I GGTCTC 1 cut(s) 430
BsoBI CYCGRG 1 cut(s) 1628
Bsp1286I GDGCHC 8 cut(s) 911, 946, 1076, 1460, 1536, 1546, 1617, 1635
Bsp1407I TGTACA 1 cut(s) 426
Bsp143I GATC 8 cut(s) 28, 185, 448, 577, 783, 863, 1067, 1085
BspACI CCGC 4 cut(s) 317, 695, 735, 1421
BspANI GGCC 8 cut(s) 93, 634, 692, 714, 975, 1476, 1497, 1735
BspCNI CTCAG 8 cut(s) 46, 324, 565, 664, 765, 983, 1551, 1570
BspHI TCATGA 1 cut(s) 1566
BspLI GGNNCC 5 cut(s) 606, 693, 763, 865, 1075
BspPI GGATC 7 cut(s) 23, 443, 585, 858, 871, 1075, 1093
BspT107I GGYRCC 1 cut(s) 1073
BspTNI GGTCTC 1 cut(s) 430
BsrFI RCCGGY 2 cut(s) 798, 845
BsrGI TGTACA 1 cut(s) 426
BsrI ACTGG 4 cut(s) 397, 976, 1014, 1591
BssAI RCCGGY 2 cut(s) 798, 845
BssECI CCNNGG 4 cut(s) 221, 915, 1513, 1736
BssMI GATC 8 cut(s) 28, 185, 448, 577, 783, 863, 1067, 1085
BssT1I CCWWGG 3 cut(s) 221, 1513, 1736
Bst2UI CCWGG 4 cut(s) 82, 636, 917, 1478
Bst4CI ACNGT 3 cut(s) 516, 616, 1336
Bst6I CTCTTC 2 cut(s) 96, 853
BstAUI TGTACA 1 cut(s) 426
BstC8I GCNNGC 1 cut(s) 800
BstDEI CTNAG 8 cut(s) 33, 332, 573, 672, 752, 970, 1538, 1557
BstEII GGTNACC 1 cut(s) 841
BstF5I GGATG 5 cut(s) 94, 347, 1168, 1303, 1678
BstH2I RGCGCY 2 cut(s) 931, 965
BstHHI GCGC 2 cut(s) 930, 964
BstKTI GATC 8 cut(s) 31, 188, 451, 580, 786, 866, 1070, 1088
BstMAI GTCTC 4 cut(s) 430, 782, 1560, 1706
BstMBI GATC 8 cut(s) 28, 185, 448, 577, 783, 863, 1067, 1085
BstMCI CGRYCG 1 cut(s) 1119
BstMWI GCNNNNNNNGC 5 cut(s) 217, 689, 1220, 1355, 1455
BstNI CCWGG 4 cut(s) 82, 636, 917, 1478
BstPAI GACNNNNGTC 2 cut(s) 372, 1233
BstPI GGTNACC 1 cut(s) 841
BstSCI CCNGG 5 cut(s) 80, 634, 915, 1476, 1599
BstSFI CTRYAG 1 cut(s) 1246
BstSLI GKGCMC 2 cut(s) 1076, 1617
BstV1I GCAGC 4 cut(s) 35, 485, 631, 1702
BstV2I GAAGAC 5 cut(s) 99, 836, 1184, 1319, 1611
BstX2I RGATCY 2 cut(s) 863, 1085
BstYI RGATCY 2 cut(s) 863, 1085
Bsu36I CCTNAGG 1 cut(s) 1538
BsuRI GGCC 8 cut(s) 93, 634, 692, 714, 975, 1476, 1497, 1735
BtgZI GCGATG 1 cut(s) 855
BtrI CACGTC 1 cut(s) 1525
BtsCI GGATG 5 cut(s) 94, 347, 1168, 1303, 1678
BtsI GCAGTG 1 cut(s) 215
BtsIMutI CAGTG 3 cut(s) 215, 512, 983
Cac8I GCNNGC 1 cut(s) 800
CciI TCATGA 1 cut(s) 1566
CfoI GCGC 2 cut(s) 930, 964
Cfr10I RCCGGY 2 cut(s) 798, 845
Cfr13I GGNCC 5 cut(s) 691, 712, 761, 919, 1423
CseI GACGC 2 cut(s) 337, 362
Csp6I GTAC 4 cut(s) 258, 427, 498, 1798
CspCI CAANNNNNGTGG 2 cut(s) 597, 632
CviAII CATG 7 cut(s) 76, 178, 254, 1184, 1319, 1472, 1567
CviQI GTAC 4 cut(s) 258, 427, 498, 1798
DdeI CTNAG 8 cut(s) 33, 332, 573, 672, 752, 970, 1538, 1557
DpnI GATC 8 cut(s) 30, 187, 450, 579, 785, 865, 1069, 1087
DpnII GATC 8 cut(s) 28, 185, 448, 577, 783, 863, 1067, 1085
DrdI GACNNNNNNGTC 2 cut(s) 1188, 1323
DseDI GACNNNNNNGTC 2 cut(s) 1188, 1323
EaeI YGGCCR 4 cut(s) 91, 632, 1474, 1495
Eam1104I CTCTTC 2 cut(s) 96, 853
EarI CTCTTC 2 cut(s) 96, 853
EciI GGCGGA 1 cut(s) 1436
Ecl136II GAGCTC 3 cut(s) 1458, 1534, 1633
Eco130I CCWWGG 3 cut(s) 221, 1513, 1736
Eco147I AGGCCT 1 cut(s) 1735
Eco24I GRGCYC 4 cut(s) 1460, 1536, 1546, 1635
Eco31I GGTCTC 1 cut(s) 430
Eco47I GGWCC 3 cut(s) 761, 919, 1423
Eco53kI GAGCTC 3 cut(s) 1458, 1534, 1633
Eco57I CTGAAG 1 cut(s) 120
Eco81I CCTNAGG 1 cut(s) 1538
Eco88I CYCGRG 1 cut(s) 1628
Eco91I GGTNACC 1 cut(s) 841
EcoICRI GAGCTC 3 cut(s) 1458, 1534, 1633
EcoO109I RGGNCCY 1 cut(s) 919
EcoO65I GGTNACC 1 cut(s) 841
EcoRI GAATTC 1 cut(s) 1562
EcoRII CCWGG 4 cut(s) 80, 634, 915, 1476
EcoT14I CCWWGG 3 cut(s) 221, 1513, 1736
EcoT38I GRGCYC 4 cut(s) 1460, 1536, 1546, 1635
ErhI CCWWGG 3 cut(s) 221, 1513, 1736
FaeI CATG 7 cut(s) 79, 181, 257, 1187, 1322, 1475, 1570
FaqI GGGAC 3 cut(s) 144, 1625, 1714
FatI CATG 7 cut(s) 75, 177, 253, 1183, 1318, 1471, 1566
FauI CCCGC 1 cut(s) 702
FblI GTMKAC 1 cut(s) 1409
Fnu4HI GCNGC 5 cut(s) 49, 474, 645, 735, 1691
FokI GGATG 5 cut(s) 81, 354, 1175, 1310, 1665
FriOI GRGCYC 4 cut(s) 1460, 1536, 1546, 1635
Fsp4HI GCNGC 5 cut(s) 49, 474, 645, 735, 1691
FspBI CTAG 6 cut(s) 24, 146, 222, 389, 1238, 1514
GlaI GCGC 2 cut(s) 929, 963
GluI GCNGC 5 cut(s) 49, 474, 645, 735, 1691
GsaI CCCAGC 2 cut(s) 954, 1061
GsuI CTGGAG 2 cut(s) 1031, 1595
HaeII RGCGCY 2 cut(s) 931, 965
HaeIII GGCC 8 cut(s) 93, 634, 692, 714, 975, 1476, 1497, 1735
HapII CCGG 8 cut(s) 631, 799, 846, 925, 939, 959, 1601, 1682
HgaI GACGC 2 cut(s) 337, 362
HhaI GCGC 2 cut(s) 930, 964
Hin1II CATG 7 cut(s) 79, 181, 257, 1187, 1322, 1475, 1570
Hin6I GCGC 2 cut(s) 928, 962
HinP1I GCGC 2 cut(s) 928, 962
HincII GTYRAC 2 cut(s) 1150, 1285
HindII GTYRAC 2 cut(s) 1150, 1285
HpaI GTTAAC 2 cut(s) 1150, 1285
HpaII CCGG 8 cut(s) 631, 799, 846, 925, 939, 959, 1601, 1682
HphI GGTGA 9 cut(s) 763, 853, 1150, 1265, 1285, 1324, 1452, 1532, 1663
Hpy166II GTNNAC 6 cut(s) 427, 1150, 1172, 1285, 1307, 1410
Hpy188I TCNGA 9 cut(s) 36, 505, 574, 582, 673, 708, 761, 891, 1027
Hpy8I GTNNAC 6 cut(s) 427, 1150, 1172, 1285, 1307, 1410
HpyAV CCTTC 6 cut(s) 172, 1211, 1346, 1604, 1633, 1685
HpyCH4III ACNGT 3 cut(s) 516, 616, 1336
HpyCH4IV ACGT 3 cut(s) 1230, 1365, 1524
HpyCH4V TGCA 7 cut(s) 51, 234, 241, 253, 473, 533, 622
HpyF10VI GCNNNNNNNGC 5 cut(s) 217, 689, 1220, 1355, 1455
HpyF3I CTNAG 8 cut(s) 33, 332, 573, 672, 752, 970, 1538, 1557
HpySE526I ACGT 3 cut(s) 1230, 1365, 1524
Hsp92II CATG 7 cut(s) 79, 181, 257, 1187, 1322, 1475, 1570
HspAI GCGC 2 cut(s) 928, 962
KroI GCCGGC 1 cut(s) 798
KroNI GCCGGC 1 cut(s) 800
KspAI GTTAAC 2 cut(s) 1150, 1285
Kzo9I GATC 8 cut(s) 28, 185, 448, 577, 783, 863, 1067, 1085
LmnI GCTCC 4 cut(s) 610, 1539, 1638, 1687
Lsp1109I GCAGC 4 cut(s) 35, 485, 631, 1702
LweI GCATC 3 cut(s) 460, 765, 1421
MaeI CTAG 6 cut(s) 24, 146, 222, 389, 1238, 1514
MaeII ACGT 3 cut(s) 1230, 1365, 1524
MaeIII GTNAC 4 cut(s) 841, 985, 1102, 1520
MalI GATC 8 cut(s) 30, 187, 450, 579, 785, 865, 1069, 1087
MboI GATC 8 cut(s) 28, 185, 448, 577, 783, 863, 1067, 1085
MflI RGATCY 2 cut(s) 863, 1085
MhlI GDGCHC 8 cut(s) 911, 946, 1076, 1460, 1536, 1546, 1617, 1635
MlsI TGGCCA 3 cut(s) 93, 1476, 1497
MluCI AATT 8 cut(s) 308, 598, 676, 1388, 1499, 1562, 1582, 1764
MluNI TGGCCA 3 cut(s) 93, 1476, 1497
MmeI TCCRAC 2 cut(s) 1005, 1321
Mox20I TGGCCA 3 cut(s) 93, 1476, 1497
MreI CGCCGGCG 1 cut(s) 798
MroNI GCCGGC 1 cut(s) 798
MroXI GAANNNNTTC 1 cut(s) 1586
MscI TGGCCA 3 cut(s) 93, 1476, 1497
MseI TTAA 3 cut(s) 626, 1149, 1284
MslI CAYNNNNRTG 2 cut(s) 617, 1109
Msp20I TGGCCA 3 cut(s) 93, 1476, 1497
MspI CCGG 8 cut(s) 631, 799, 846, 925, 939, 959, 1601, 1682
MspR9I CCNGG 5 cut(s) 82, 636, 917, 1478, 1601
MvaI CCWGG 4 cut(s) 82, 636, 917, 1478
MwoI GCNNNNNNNGC 5 cut(s) 217, 689, 1220, 1355, 1455
NaeI GCCGGC 1 cut(s) 800
NciI CCSGG 1 cut(s) 1601
NdeII GATC 8 cut(s) 28, 185, 448, 577, 783, 863, 1067, 1085
NgoMIV GCCGGC 1 cut(s) 798
NlaIII CATG 7 cut(s) 79, 181, 257, 1187, 1322, 1475, 1570
NlaIV GGNNCC 5 cut(s) 606, 693, 763, 865, 1075
NmuCI GTSAC 4 cut(s) 841, 985, 1102, 1520
OliI CACNNNNGTG 2 cut(s) 617, 1109
PagI TCATGA 1 cut(s) 1566
PceI AGGCCT 1 cut(s) 1735
PcsI WCGNNNNNNNCGW 1 cut(s) 1112
PdiI GCCGGC 1 cut(s) 800
PdmI GAANNNNTTC 1 cut(s) 1586
PfeI GAWTC 4 cut(s) 142, 228, 817, 1570
PflMI CCANNNNNTGG 1 cut(s) 81
PfoI TCCNGGA 1 cut(s) 1599
PkrI GCNGC 5 cut(s) 50, 475, 646, 736, 1692
PpuMI RGGWCCY 1 cut(s) 919
PshAI GACNNNNGTC 2 cut(s) 372, 1233
Psp124BI GAGCTC 3 cut(s) 1460, 1536, 1635
Psp5II RGGWCCY 1 cut(s) 919
Psp6I CCWGG 4 cut(s) 80, 634, 915, 1476
PspEI GGTNACC 1 cut(s) 841
PspFI CCCAGC 2 cut(s) 950, 1057
PspGI CCWGG 4 cut(s) 80, 634, 915, 1476
PspN4I GGNNCC 5 cut(s) 606, 693, 763, 865, 1075
PspPI GGNCC 5 cut(s) 691, 712, 761, 919, 1423
PspPPI RGGWCCY 1 cut(s) 919
PsuI RGATCY 2 cut(s) 863, 1085
RsaI GTAC 4 cut(s) 259, 428, 499, 1799
RsaNI GTAC 4 cut(s) 258, 427, 498, 1798
RseI CAYNNNNRTG 2 cut(s) 617, 1109
SacI GAGCTC 3 cut(s) 1460, 1536, 1635
SaqAI TTAA 3 cut(s) 626, 1149, 1284
SatI GCNGC 5 cut(s) 49, 474, 645, 735, 1691
Sau3AI GATC 8 cut(s) 28, 185, 448, 577, 783, 863, 1067, 1085
Sau96I GGNCC 5 cut(s) 691, 712, 761, 919, 1423
ScrFI CCNGG 5 cut(s) 82, 636, 917, 1478, 1601
SduI GDGCHC 8 cut(s) 911, 946, 1076, 1460, 1536, 1546, 1617, 1635
SfaNI GCATC 3 cut(s) 460, 765, 1421
SfcI CTRYAG 1 cut(s) 1246
SgrAI CRCCGGYG 1 cut(s) 798
SinI GGWCC 3 cut(s) 761, 919, 1423
SmiMI CAYNNNNRTG 2 cut(s) 617, 1109
Sse9I AATT 8 cut(s) 308, 598, 676, 1388, 1499, 1562, 1582, 1764
SseBI AGGCCT 1 cut(s) 1735
SsiI CCGC 4 cut(s) 317, 695, 735, 1421
SspI AATATT 1 cut(s) 193
SspMI CTAG 6 cut(s) 24, 146, 222, 389, 1238, 1514
SstI GAGCTC 3 cut(s) 1460, 1536, 1635
StuI AGGCCT 1 cut(s) 1735
StyD4I CCNGG 5 cut(s) 80, 634, 915, 1476, 1599
StyI CCWWGG 3 cut(s) 221, 1513, 1736
TaaI ACNGT 3 cut(s) 516, 616, 1336
TaiI ACGT 3 cut(s) 1233, 1368, 1527
TaqI TCGA 8 cut(s) 61, 786, 815, 876, 911, 932, 946, 966
TaqII GACCGA 1 cut(s) 1133
TasI AATT 8 cut(s) 308, 598, 676, 1388, 1499, 1562, 1582, 1764
TatI WGTACW 1 cut(s) 426
TauI GCSGC 1 cut(s) 737
TfiI GAWTC 4 cut(s) 142, 228, 817, 1570
Tru1I TTAA 3 cut(s) 626, 1149, 1284
Tru9I TTAA 3 cut(s) 626, 1149, 1284
TscAI CASTG 3 cut(s) 222, 519, 983
TseFI GTSAC 4 cut(s) 841, 985, 1102, 1520
TseI GCWGC 4 cut(s) 48, 473, 644, 1690
Tsp45I GTSAC 4 cut(s) 841, 985, 1102, 1520
TspDTI ATGAA 6 cut(s) 185, 315, 540, 1555, 1583, 1667
TspGWI ACGGA 3 cut(s) 70, 187, 1785
TspRI CASTG 3 cut(s) 222, 519, 983
Van91I CCANNNNNTGG 1 cut(s) 81
VpaK11BI GGWCC 3 cut(s) 761, 919, 1423
XapI RAATTY 5 cut(s) 308, 598, 676, 1562, 1582
XbaI TCTAGA 1 cut(s) 145
XmaJI CCTAGG 2 cut(s) 221, 1513
XmiI GTMKAC 1 cut(s) 1409
XmnI GAANNNNTTC 1 cut(s) 1586
XspI CTAG 6 cut(s) 24, 146, 222, 389, 1238, 1514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.