Rw0G021370

B3 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00985
OG0000561
Physical Location & Seq
Forward (+)
4097 .. 9468
5372 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G021370.1

Sequence Viewer

Length: 1845 bp
ATGAATGACAGGGAGGAGGAAATGTCCGAGGATTTCCGAGAAGAAAAACAGGAGGAGGAGAAGGACAGGATGGACATTTCCCCGCTCTCTGTCACCAGACAACAATTTAACAATTTGACCCTCCATTCAACATTCTCGGTACAGCAGAGGAAGCGCTCTAAGATCCGGACAAGTCGATTTAGTCCAACCCAAATTGTCAAATTCCACAATTTGACCCTTGATTCTCCAAACTCGGAACAGAGGCAGCCATTGGCGGAAGCTAACAAATATGGGTTCAAAACTCCCAAAGGGAAAAGACATTTGAGTCCAGGCCTTAACACCAAGCGAGAAGTTTCTAGTGATCCTCAGAGGCATGGAGGCTGCAAACGGAGTCGGACCAACCCGTCCATGTCCTGGCATTTTGGCCATCCTGAAGAGTCTTCTGTCAAAAGCCAAGTTAGAGAAATCCCAGAGAATCTAGAACCCGAATGTCCCTTCTTTATGAAGTCCATGATACGATCAAATATTTCAGTTTGCTTTATGCTGACACTGCCTAGGAGATTCTGCAACTTGCACTTACCATTGCATGGTACAGCAACAATAACATTGGAAGATAAAGAAGGGAAAGAATATGAAACAAAATTTCTTGCGGACAAAAGGACGCTGAGTGGTGGATGGAAAGGATTTTGTCAGGCAAAAGACTTGCGTCTTGATGATGTTCTAGTTTTTCAGTTGGTTAGCCCTTTGAAGTTCAAGCTTATTCTTATATTGCTGTGTCTACACACTGTTGCAGGTGTACAGAATGAGACCAGAATTGGAAAACCCTCCAATGCAGAGGAAAACCCTGCAAACCTGACAAGCTATTCATTTCTCCCTGTCCCTACTACTTCAACTCCATTTGACGATTTCACCCTTCATCCGGTGGAGCAGCACAGAGGGACATTGGAGGAGACAACCCAAAATGGGTTCAGGCCTTGGAAGTGGAAAAGTCCATTGAGTCCAATTCCCAAGAGAAAAAATGCTGGGGATCCTCTGAGGAATGGAGGCTATAAGCGTAAGATCACTAAGTCCAACTATCATGAAAAGTCTTCTGTCAGAAACCAACTGCAACATATCCTGGCAAATCTAGGACCTGAATGTCCCTTCTTTTTGAAGTCTATGATACATTGTAATGTGGTCCATGGCTTTAGTTTGACATTGCCGAAGCAATTCTGCTATTTGTATCTGCCATTCCATGATACAACTATAACCTTGGAAGATGAAAGAGGAGAGGAATATAGAACAATATTTCTTGGGGACAAGAGGAGACTGAGCGGTGGATGGAGAGGGTTTTGTGTTGCAAAGAAATTAGTTCTTGGCGACCTCTTAGTTTTCCATTTGGTCAGTCCTTTGAAGTTTAAGGTATGCTTCTATTGTTGCTTGGGCATAATTTTCTGTATTTTTGACAATAACTGCTATTGGTTCTTGATACCCCACCAATTTGATGCGACTTTGTCCACATTAATTGGAATTTCTTGCTTGGATGAAGAGCTTGTTCTTTGGCCTTCGCATCTGCATTTTGACTCTTGTAGTGTAGTACACAATCATATATACACAATATTGCAGGTGTACAAAGTGGAACCTGATAGTCTAACTGAAGTAGATGCAGCTTTTATCCTCTTGAAATTGAGTCTCCCCACACTATTTGAAGAGTACCATCCAATGCCTCCTCCAAAAGATGCTTGCCAAGACAATATTCAAACGACAAGTCTGACAATAGATGCTATTCTGGAGCGTGTAGATGAAGATCACTCCGAGGATTACAGTGATCGTTTTGGCTCCAATCTACTATTTCATGCAGGACTAGTTACTCTTGAAGATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

614

Amino Acids

70.57

Weight (kDa)

6.94

Isoelectric Point (pI)

56.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 160 - 248 3.1e-15 B3 DNA binding domain
B3 PF02362 376 - 466 1.1e-13 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000561)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06320 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330 FvH4_2g06330
malus_domestica MD05G1077500.v1.1 MD10G1092700.v1.1
prunus_persica Prupe.8G122500_v2.0.a1 Prupe.8G122500_v2.0.a1 Prupe.8G122500_v2.0.a1
pyrus_communis pycom10g07620
rosa_chinensis RchiOBHm_Chr2g0147541 RchiOBHm_Chr2g0168211 RchiOBHm_Chr6g0256791 RchiOBHm_Chr6g0258071 RchiOBHm_Chr6g0258081 RchiOBHm_Chr6g0258121 RchiOBHm_Chr6g0258181 RchiOBHm_Chr6g0258201 RchiOBHm_Chr6g0258211
rosa_laevigata RLG00000014639 RLG00000014642 RLG00000014647
rosa_multiflora Rmu_sc0006058.1_g000005 Rmu_sc0007933.1_g000012
rosa_roxburghii Rroxscaffold_7G00205330 Rroxscaffold_7G00205340 Rroxscaffold_7G00208080 Rroxscaffold_7G00208100 Rroxscaffold_7G00208160
rosa_rugosa Rorug05G0578100 Rorug05G0578200 Rorug05G0578300 Rorug05G0578400 Rorug05G0578400 Rorug05G0578500 Rorug05G0578600 Rorug05G0578700 Rorug05G0578800 Rorug05G0578900 Rorug05G0579000 Rorug05G0579300 Rorug05G0579300 Rorug05G0579400
rosa_samantha Rh2BG613900 Rh4BG034900 Rh6AG096700 Rh6AG097000 Rh6AG097100 Rh6AG097300 Rh6BG087600 Rh6BG088200 Rh6BG088300 Rh6CG083700 Rh6CG083900 Rh6CG084000 Rh6CG084200 Rh6DG079500 Rh6DG080000 Rh6DG080200 Rh6DG080400 Rh6DG164000 Rh7BG391100 Rh7CG434700 Rh7CG467700
rosa_wichuraiana Rw0G021370 Rw0G021380 Rw6G008220 Rw6G008240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 761, 1573
AasI GACNNNNNNGTC 3 cut(s) 303, 382, 1116
Acc36I ACCTGC 2 cut(s) 761, 1573
AccB7I CCANNNNNTGG 2 cut(s) 393, 566
AccBSI CCGCTC 2 cut(s) 85, 1293
AccI GTMKAC 1 cut(s) 757
AccIII TCCGGA 1 cut(s) 165
AciI CCGC 4 cut(s) 83, 254, 629, 1293
AclWI GGATC 4 cut(s) 157, 335, 1001, 1014
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 3 cut(s) 200, 620, 1488
AcuI CTGAAG 2 cut(s) 432, 1635
AfaI GTAC 6 cut(s) 141, 571, 777, 1557, 1589, 1673
AfeI AGCGCT 1 cut(s) 155
AfiI CCNNNNNNNGG 4 cut(s) 393, 566, 898, 942
AhlI ACTAGT 1 cut(s) 1822
AjnI CCWGG 3 cut(s) 307, 392, 1095
AjuI GAANNNNNNNTTGG 2 cut(s) 1698, 1730
AluBI AGCT 5 cut(s) 260, 736, 840, 1510, 1628
AluI AGCT 5 cut(s) 260, 736, 840, 1510, 1628
Alw26I GTCTC 4 cut(s) 779, 923, 1279, 1655
AlwI GGATC 4 cut(s) 157, 335, 1001, 1014
Aor13HI TCCGGA 1 cut(s) 165
Aor51HI AGCGCT 1 cut(s) 155
AoxI GGCC 4 cut(s) 310, 403, 950, 1520
ApeKI GCWGC 4 cut(s) 244, 360, 907, 1625
ApoI RAATTY 3 cut(s) 200, 620, 1488
ArsI GACNNNNNNTTYG 2 cut(s) 1711, 1743
AseI ATTAAT 1 cut(s) 1481
Asp700I GAANNNNTTC 1 cut(s) 1187
AspA2I CCTAGG 1 cut(s) 533
AspLEI GCGC 1 cut(s) 156
AspS9I GGNCC 3 cut(s) 375, 1109, 1156
AsuHPI GGTGA 2 cut(s) 85, 880
AvaII GGWCC 3 cut(s) 375, 1109, 1156
AvrII CCTAGG 1 cut(s) 533
BalI TGGCCA 1 cut(s) 405
BamHI GGATCC 1 cut(s) 1006
BbsI GAAGAC 2 cut(s) 411, 1059
BbvI GCAGC 4 cut(s) 256, 347, 919, 1637
BccI CCATC 5 cut(s) 64, 414, 648, 1293, 1683
BciT130I CCWGG 3 cut(s) 309, 394, 1097
BcoDI GTCTC 4 cut(s) 779, 923, 1279, 1655
BcuI ACTAGT 1 cut(s) 1822
BfaI CTAG 6 cut(s) 336, 458, 534, 701, 1106, 1823
BfoI RGCGCY 1 cut(s) 157
BfuAI ACCTGC 2 cut(s) 761, 1573
BisI GCNGC 4 cut(s) 245, 361, 908, 1626
BlnI CCTAGG 1 cut(s) 533
BlsI GCNGC 4 cut(s) 246, 362, 909, 1627
Bme1390I CCNGG 3 cut(s) 309, 394, 1097
Bme18I GGWCC 3 cut(s) 375, 1109, 1156
BmgT120I GGNCC 3 cut(s) 375, 1109, 1156
BmiI GGNNCC 3 cut(s) 1008, 1599, 1798
BmrFI CCNGG 3 cut(s) 309, 394, 1097
BmsI GCATC 5 cut(s) 1453, 1537, 1612, 1687, 1729
BoxI GACNNNNGTC 1 cut(s) 684
BpiI GAAGAC 2 cut(s) 411, 1059
BpmI CTGGAG 1 cut(s) 1769
BsaBI GATNNNNATC 1 cut(s) 1764
BsaI GGTCTC 1 cut(s) 779
BsaJI CCNNGG 6 cut(s) 27, 533, 953, 1159, 1230, 1773
BsaWI WCCGGW 2 cut(s) 165, 898
BsaXI ACNNNNNCTCC 4 cut(s) 8, 38, 856, 886
Bsc4I CCNNNNNNNGG 4 cut(s) 393, 566, 898, 942
Bse3DI GCAATG 2 cut(s) 560, 1175
Bse8I GATNNNNATC 1 cut(s) 1764
BseAI TCCGGA 1 cut(s) 165
BseBI CCWGG 3 cut(s) 309, 394, 1097
BseDI CCNNGG 6 cut(s) 27, 533, 953, 1159, 1230, 1773
BseGI GGATG 7 cut(s) 75, 406, 659, 895, 1304, 1507, 1675
BseJI GATNNNNATC 1 cut(s) 1764
BseLI CCNNNNNNNGG 4 cut(s) 393, 566, 898, 942
BseMI GCAATG 2 cut(s) 560, 1175
BseMII CTCAG 4 cut(s) 359, 635, 1004, 1280
BseRI GAGGAG 7 cut(s) 29, 68, 71, 941, 1260, 1297, 1677
BseXI GCAGC 4 cut(s) 256, 347, 919, 1637
BseYI CCCAGC 1 cut(s) 1001
BshFI GGCC 4 cut(s) 312, 405, 952, 1522
BsiSI CCGG 2 cut(s) 166, 899
BslFI GGGAC 5 cut(s) 456, 842, 931, 1104, 1289
BslI CCNNNNNNNGG 4 cut(s) 393, 566, 898, 942
BsmAI GTCTC 4 cut(s) 779, 923, 1279, 1655
BsmFI GGGAC 5 cut(s) 456, 842, 931, 1104, 1289
BsnI GGCC 4 cut(s) 312, 405, 952, 1522
Bso31I GGTCTC 1 cut(s) 779
Bsp13I TCCGGA 1 cut(s) 165
Bsp1407I TGTACA 2 cut(s) 775, 1587
Bsp143I GATC 7 cut(s) 162, 340, 497, 1006, 1038, 1765, 1786
Bsp19I CCATGG 1 cut(s) 1159
BspACI CCGC 4 cut(s) 83, 254, 629, 1293
BspANI GGCC 4 cut(s) 312, 405, 952, 1522
BspCNI CTCAG 4 cut(s) 358, 636, 1005, 1281
BspEI TCCGGA 1 cut(s) 165
BspHI TCATGA 1 cut(s) 1057
BspLI GGNNCC 3 cut(s) 1008, 1599, 1798
BspMI ACCTGC 2 cut(s) 761, 1573
BspPI GGATC 4 cut(s) 157, 335, 1001, 1014
BspQI GCTCTTC 1 cut(s) 1500
BspTNI GGTCTC 1 cut(s) 779
BsrBI CCGCTC 2 cut(s) 85, 1293
BsrDI GCAATG 2 cut(s) 560, 1175
BsrGI TGTACA 2 cut(s) 775, 1587
BssECI CCNNGG 6 cut(s) 27, 533, 953, 1159, 1230, 1773
BssMI GATC 7 cut(s) 162, 340, 497, 1006, 1038, 1765, 1786
BssT1I CCWWGG 4 cut(s) 533, 953, 1159, 1230
Bst2UI CCWGG 3 cut(s) 309, 394, 1097
Bst4CI ACNGT 2 cut(s) 766, 1784
Bst6I CTCTTC 3 cut(s) 408, 1500, 1662
BstAUI TGTACA 2 cut(s) 775, 1587
BstC8I GCNNGC 1 cut(s) 1702
BstDEI CTNAG 7 cut(s) 159, 345, 644, 1013, 1044, 1289, 1345
BstDSI CCRYGG 1 cut(s) 1159
BstF5I GGATG 7 cut(s) 75, 406, 659, 895, 1304, 1507, 1675
BstH2I RGCGCY 1 cut(s) 157
BstHHI GCGC 1 cut(s) 156
BstKTI GATC 7 cut(s) 165, 343, 500, 1009, 1041, 1768, 1789
BstMAI GTCTC 4 cut(s) 779, 923, 1279, 1655
BstMBI GATC 7 cut(s) 162, 340, 497, 1006, 1038, 1765, 1786
BstMWI GCNNNNNNNGC 2 cut(s) 151, 529
BstNI CCWGG 3 cut(s) 309, 394, 1097
BstPAI GACNNNNGTC 1 cut(s) 684
BstSCI CCNGG 3 cut(s) 307, 392, 1095
BstV1I GCAGC 4 cut(s) 256, 347, 919, 1637
BstV2I GAAGAC 2 cut(s) 411, 1059
BstX2I RGATCY 2 cut(s) 162, 1006
BstYI RGATCY 2 cut(s) 162, 1006
BsuRI GGCC 4 cut(s) 312, 405, 952, 1522
BtgI CCRYGG 1 cut(s) 1159
BtsCI GGATG 7 cut(s) 75, 406, 659, 895, 1304, 1507, 1675
BtsI GCAGTG 1 cut(s) 527
BtsIMutI CAGTG 3 cut(s) 527, 762, 1789
BveI ACCTGC 2 cut(s) 761, 1573
Cac8I GCNNGC 1 cut(s) 1702
CciI TCATGA 1 cut(s) 1057
CfoI GCGC 1 cut(s) 156
Cfr13I GGNCC 3 cut(s) 375, 1109, 1156
CseI GACGC 2 cut(s) 649, 674
Csp6I GTAC 6 cut(s) 140, 570, 776, 1556, 1588, 1672
CspCI CAANNNNNGTGG 4 cut(s) 1465, 1500, 1645, 1680
CviAII CATG 8 cut(s) 353, 388, 490, 566, 1058, 1160, 1214, 1814
CviQI GTAC 6 cut(s) 140, 570, 776, 1556, 1588, 1672
DdeI CTNAG 7 cut(s) 159, 345, 644, 1013, 1044, 1289, 1345
DpnI GATC 7 cut(s) 164, 342, 499, 1008, 1040, 1767, 1788
DpnII GATC 7 cut(s) 162, 340, 497, 1006, 1038, 1765, 1786
DrdI GACNNNNNNGTC 3 cut(s) 303, 382, 1116
DseDI GACNNNNNNGTC 3 cut(s) 303, 382, 1116
EaeI YGGCCR 1 cut(s) 403
Eam1104I CTCTTC 3 cut(s) 408, 1500, 1662
EarI CTCTTC 3 cut(s) 408, 1500, 1662
EciI GGCGGA 1 cut(s) 269
Eco130I CCWWGG 4 cut(s) 533, 953, 1159, 1230
Eco147I AGGCCT 2 cut(s) 312, 952
Eco31I GGTCTC 1 cut(s) 779
Eco47I GGWCC 3 cut(s) 375, 1109, 1156
Eco47III AGCGCT 1 cut(s) 155
Eco57I CTGAAG 2 cut(s) 432, 1635
EcoO109I RGGNCCY 1 cut(s) 1109
EcoRII CCWGG 3 cut(s) 307, 392, 1095
EcoT14I CCWWGG 4 cut(s) 533, 953, 1159, 1230
ErhI CCWWGG 4 cut(s) 533, 953, 1159, 1230
FaeI CATG 8 cut(s) 356, 391, 493, 569, 1061, 1163, 1217, 1817
FalI AAGNNNNNCTT 2 cut(s) 1370, 1402
FaqI GGGAC 5 cut(s) 456, 842, 931, 1104, 1289
FatI CATG 8 cut(s) 352, 387, 489, 565, 1057, 1159, 1213, 1813
FauI CCCGC 1 cut(s) 90
FblI GTMKAC 1 cut(s) 757
Fnu4HI GCNGC 4 cut(s) 245, 361, 908, 1626
FokI GGATG 7 cut(s) 82, 393, 666, 882, 1311, 1514, 1662
Fsp4HI GCNGC 4 cut(s) 245, 361, 908, 1626
FspBI CTAG 6 cut(s) 336, 458, 534, 701, 1106, 1823
GlaI GCGC 1 cut(s) 155
GluI GCNGC 4 cut(s) 245, 361, 908, 1626
GsaI CCCAGC 1 cut(s) 1005
GsuI CTGGAG 1 cut(s) 1769
HaeII RGCGCY 1 cut(s) 157
HaeIII GGCC 4 cut(s) 312, 405, 952, 1522
HapII CCGG 2 cut(s) 166, 899
HgaI GACGC 2 cut(s) 649, 674
HhaI GCGC 1 cut(s) 156
Hin1II CATG 8 cut(s) 356, 391, 493, 569, 1061, 1163, 1217, 1817
Hin6I GCGC 1 cut(s) 154
HinP1I GCGC 1 cut(s) 154
HindIII AAGCTT 1 cut(s) 734
HinfI GANTC 9 cut(s) 221, 304, 370, 416, 454, 540, 976, 1541, 1648
HpaII CCGG 2 cut(s) 166, 899
HphI GGTGA 2 cut(s) 85, 880
Hpy166II GTNNAC 5 cut(s) 758, 776, 1476, 1558, 1588
Hpy188I TCNGA 9 cut(s) 28, 38, 235, 348, 375, 1014, 1076, 1731, 1774
Hpy188III TCNNGA 9 cut(s) 166, 410, 458, 689, 1058, 1444, 1639, 1748, 1832
Hpy8I GTNNAC 5 cut(s) 758, 776, 1476, 1558, 1588
HpyAV CCTTC 6 cut(s) 55, 484, 593, 902, 1132, 1533
HpyCH4III ACNGT 2 cut(s) 766, 1784
HpyF10VI GCNNNNNNNGC 2 cut(s) 151, 529
HpyF3I CTNAG 7 cut(s) 159, 345, 644, 1013, 1044, 1289, 1345
Hsp92II CATG 8 cut(s) 356, 391, 493, 569, 1061, 1163, 1217, 1817
HspAI GCGC 1 cut(s) 154
Kpn2I TCCGGA 1 cut(s) 165
Kzo9I GATC 7 cut(s) 162, 340, 497, 1006, 1038, 1765, 1786
LguI GCTCTTC 1 cut(s) 1500
LmnI GCTCC 3 cut(s) 904, 1750, 1802
Lsp1109I GCAGC 4 cut(s) 256, 347, 919, 1637
LweI GCATC 5 cut(s) 1453, 1537, 1612, 1687, 1729
MaeI CTAG 6 cut(s) 336, 458, 534, 701, 1106, 1823
MaeIII GTNAC 2 cut(s) 91, 1825
MalI GATC 7 cut(s) 164, 342, 499, 1008, 1040, 1767, 1788
MbiI CCGCTC 2 cut(s) 85, 1293
MboI GATC 7 cut(s) 162, 340, 497, 1006, 1038, 1765, 1786
MboII GAAGA 9 cut(s) 53, 411, 425, 602, 1059, 1247, 1517, 1679, 1775
MflI RGATCY 2 cut(s) 162, 1006
MlsI TGGCCA 1 cut(s) 405
MluNI TGGCCA 1 cut(s) 405
MlyI GAGTC 6 cut(s) 313, 379, 425, 985, 1535, 1657
MmeI TCCRAC 3 cut(s) 209, 353, 1074
Mox20I TGGCCA 1 cut(s) 405
MroI TCCGGA 1 cut(s) 165
MroXI GAANNNNTTC 1 cut(s) 1187
MscI TGGCCA 1 cut(s) 405
MseI TTAA 4 cut(s) 108, 315, 1377, 1481
MslI CAYNNNNRTG 1 cut(s) 1149
Msp20I TGGCCA 1 cut(s) 405
MspI CCGG 2 cut(s) 166, 899
MspR9I CCNGG 3 cut(s) 309, 394, 1097
MvaI CCWGG 3 cut(s) 309, 394, 1097
MwoI GCNNNNNNNGC 2 cut(s) 151, 529
NcoI CCATGG 1 cut(s) 1159
NdeII GATC 7 cut(s) 162, 340, 497, 1006, 1038, 1765, 1786
NlaIII CATG 8 cut(s) 356, 391, 493, 569, 1061, 1163, 1217, 1817
NlaIV GGNNCC 3 cut(s) 1008, 1599, 1798
NmuCI GTSAC 1 cut(s) 91
PagI TCATGA 1 cut(s) 1057
PaqCI CACCTGC 2 cut(s) 761, 1573
PceI AGGCCT 2 cut(s) 312, 952
PciSI GCTCTTC 1 cut(s) 1500
PdmI GAANNNNTTC 1 cut(s) 1187
PfeI GAWTC 3 cut(s) 221, 454, 540
PflFI GACNNNGTC 1 cut(s) 1471
PflMI CCANNNNNTGG 2 cut(s) 393, 566
PkrI GCNGC 4 cut(s) 246, 362, 909, 1627
PleI GAGTC 6 cut(s) 312, 378, 424, 984, 1535, 1656
PpsI GAGTC 6 cut(s) 312, 378, 424, 984, 1535, 1656
PpuMI RGGWCCY 1 cut(s) 1109
PshAI GACNNNNGTC 1 cut(s) 684
PshBI ATTAAT 1 cut(s) 1481
Psp5II RGGWCCY 1 cut(s) 1109
Psp6I CCWGG 3 cut(s) 307, 392, 1095
PspFI CCCAGC 1 cut(s) 1001
PspGI CCWGG 3 cut(s) 307, 392, 1095
PspN4I GGNNCC 3 cut(s) 1008, 1599, 1798
PspPI GGNCC 3 cut(s) 375, 1109, 1156
PspPPI RGGWCCY 1 cut(s) 1109
PsuI RGATCY 2 cut(s) 162, 1006
PsyI GACNNNGTC 1 cut(s) 1471
RsaI GTAC 6 cut(s) 141, 571, 777, 1557, 1589, 1673
RsaNI GTAC 6 cut(s) 140, 570, 776, 1556, 1588, 1672
RseI CAYNNNNRTG 1 cut(s) 1149
SapI GCTCTTC 1 cut(s) 1500
SaqAI TTAA 4 cut(s) 108, 315, 1377, 1481
SatI GCNGC 4 cut(s) 245, 361, 908, 1626
Sau3AI GATC 7 cut(s) 162, 340, 497, 1006, 1038, 1765, 1786
Sau96I GGNCC 3 cut(s) 375, 1109, 1156
SchI GAGTC 6 cut(s) 313, 379, 425, 985, 1535, 1657
ScrFI CCNGG 3 cut(s) 309, 394, 1097
SfaNI GCATC 5 cut(s) 1453, 1537, 1612, 1687, 1729
SinI GGWCC 3 cut(s) 375, 1109, 1156
SmiMI CAYNNNNRTG 1 cut(s) 1149
SpeI ACTAGT 1 cut(s) 1822
SseBI AGGCCT 2 cut(s) 312, 952
SsiI CCGC 4 cut(s) 83, 254, 629, 1293
SspI AATATT 4 cut(s) 505, 1266, 1578, 1714
SspMI CTAG 6 cut(s) 336, 458, 534, 701, 1106, 1823
StuI AGGCCT 2 cut(s) 312, 952
StyD4I CCNGG 3 cut(s) 307, 392, 1095
StyI CCWWGG 4 cut(s) 533, 953, 1159, 1230
TaaI ACNGT 2 cut(s) 766, 1784
TaqI TCGA 1 cut(s) 175
TatI WGTACW 3 cut(s) 775, 1555, 1587
TfiI GAWTC 3 cut(s) 221, 454, 540
Tru1I TTAA 4 cut(s) 108, 315, 1377, 1481
Tru9I TTAA 4 cut(s) 108, 315, 1377, 1481
TscAI CASTG 3 cut(s) 534, 769, 1789
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 4 cut(s) 244, 360, 907, 1625
Tsp45I GTSAC 1 cut(s) 91
TspGWI ACGGA 1 cut(s) 382
TspRI CASTG 3 cut(s) 534, 769, 1789
Tth111I GACNNNGTC 1 cut(s) 1471
Van91I CCANNNNNTGG 2 cut(s) 393, 566
VpaK11BI GGWCC 3 cut(s) 375, 1109, 1156
VspI ATTAAT 1 cut(s) 1481
XapI RAATTY 3 cut(s) 200, 620, 1488
XbaI TCTAGA 1 cut(s) 457
XmaJI CCTAGG 1 cut(s) 533
XmiI GTMKAC 1 cut(s) 757
XmnI GAANNNNTTC 1 cut(s) 1187
XspI CTAG 6 cut(s) 336, 458, 534, 701, 1106, 1823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.