Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001102

Physical Location & Seq

Genomic Coordinates Reverse (-)

17144070 .. 17146725

Gene Structure 2656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0103100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGATAGCATGGATGAGGAAGGGCTTCGTTTCAGTGACTACAAGTATCATAAACAAGTGTTTTCAGACGAAGATAAAGATGCACCGCTGGGGTTCGAAAGCTTCGCTGATCGTTTTGGAGAGGTTCCGTTCCAAGAAACCATGTCCCCCAACAGACCAATAGCATCGGAAGCAGAAATGGAGATGAATGGATGTAATGAAGCAGAGAAGTTCTACAAGTATTACTCCCATGTGGTCGGCTTCAGCACAAGGAAAGCTAAGAAGGACCTACACAAAACGAAAAAAACAGTATATCGAAGGCAGTGGGTGTGTTCTGAAGCTGGACAGCATGTTTCGGTACAAAAGAGCGCAGAGTTTGGAAGTGGTGGAATCAATGAAGGCCCCGATGGTGATAAGAAAAAGGTGTCGAGGAACAAATTGCTTCGGGGAAGAAGGATAACTAGATGTGGCTGCCCTGCCCAGTTGATGATTATGTGGTCTACTCCGCAAAATTTGTTCTATGTTTCAAAGTATATTACGCAGCACAATCACGATCTTGTTATCGTCCCTGAAGTTCATTTCCTTAGATCCCACCGTAAGGCCGGTGCATATCATAACATGCGATTCCTGCTTAAGGATCTTTACAACAAGCTTCGTCCAAAGATATTGAAAAATGGTGACGAGGGTGATGCAGAAATGGCTACAGTACATACAAGACGAACAGGAATAGTACGTAAGCCTATGGTGTTATTTGTCGGGTGTAACAATCACCGAGGCACCGTTGTGTTTGGGGTTGCACTTGTTGTGGATGAGAAAGAGGAAACTTACGATTGGCTCTTTAACCAGTTCATCGAATCAATGCAACAAAAAAGGCCTTTATCGGTCCTTACTGACGAGGACGAAGCTATGAAGAATGCTATGGAACGGGTGATGCCCCAAACCCGTCACAGACTATGTGCTTGGCACATCGGCAGAAACATTGGCCAGAACCTAAACTCGGAAGAAGTTAAGAAAGCTATTGGGCAATTGATGTTTGCATCTTTGACCGTAGCAGAGTGGGAGTCCGCGTGGCAATCTGTTATTTTGAAGTTTGGCCTTCAAAATAATGCTTGGGTGTGTTCTTTGTATAAAAAGCGGGATCGCTGGGCGGAGGCATATTTTCGAGGCCACTTTTTCGGGGGTATGTGCAGCACACAGAGATGCGAGGGTATGAATTGTCAGTTTAAAAAACAGATCTCCAGGTACACAAAGTTGTCGGATGTTATGCCACGATTGGAGTGGAAACTGAATCGGTTAAGGGATCACGTCATGCGTGACAACTTCAACGTTAAAAATACCACCCCTGTGTTTGATACTCACATGAGAGGCTTAGAGGAACAAGCGTGCAAAATTTTCACGCATGACATATTTATCATGATTAAGTCTCAAATAAGGTTTGAAGGGAGGTTTGTCGTTCATAAAAGGTTCAAGTTTCCTAATGTTGATGCAATTGTTTTTTATCTGGACCAGTATGACAGAGTAGAACGTCTTTGGTGCATTGAGTATCGAGGGAACAATGGTAATCCTGAGTGGTTATGCTCGTGCAAGATGTATGAATCTGACGACATTCCTTGTGCACATCTGTTCAGTGTTATGAAAGCGGAGTTGGTTTCAGAATTTCCAAATTGTCTGATTTTGAAGCGATGGACACGTTCAGTTGGCGAAACTACTATAGCCCCTTCGCTTTCCCATATGTCAAATGATAAGTATGCCCAATGTGCAAGGTATGCTGCCCTCCTAATTGAAGCTGCAGAAGCCTGTTTAAATTACTCCAACTCTAGTGAAAGCTTCAATGCTGCAATGATTGAACTTCAAACCTTCAAATCTAAATCTCTGCAATACCATGAAGTTGGGAAAAAAAACATTCCTAACCCTACAGACACTCCAATTGTTGTGAGGGACCCGTTGATGTCAAGAACGAAGGGAATGTCGTGCAATACACAAGGGCACAACGATAGTCAAATGAAGAAAAGTGTCATTACTTGCGGACAATGTCATCAGATTGGTCACAACAGGCGCACATGCAAAGCACATGAAGATCGGTTCGAGATAAATGGTACAGGAGACGGACAATCACCAGTCGTAGATACTGCTGCAGCCGTTGGTCAAGAATGGGAACCATCAATTCCAGACTTTTCTCCTGCGGGGAGTGATCACATTTCAACTCCTTCCAGCCTATGTTTACCTACAAACATTTCGCAGCCAGGCGTTGTGCAACCAAAACCGTCCATATCAATTCAGGTGAATGATTGCATGTGGCCTGATATGGAGTTCCCCCTGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006364 GO:0006396 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016070 GO:0016072 GO:0019538 GO:0022613 GO:0022625 GO:0022626 GO:0032991 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0042254 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L7Ae

Protein Analysis

767

Amino Acids

88.05

Weight (kDa)

8.56

Isoelectric Point (pI)

47.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	70 - 180	5.6e-15	FAR1 DNA-binding domain
MULE	PF10551	233 - 318	5.7e-22	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001102)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47610 AT3G62870
fragaria_vesca	FvH4_6g53860 FvH4_6g53860 FvH4_7g05790 FvH4_7g05790 FvH4_7g05790
malus_domestica	MD06G1137700.v1.1 MD09G1007800.v1.1 MD14G1152500.v1.1 MD17G1002900.v1.1 MD17G1011700.v1.1
prunus_persica	Prupe.3G309200_v2.0.a1 Prupe.5G147500_v2.0.a1
pyrus_communis	pycom06g12890 pycom17g00640
rosa_chinensis	RchiOBHm_Chr1g0332881 RchiOBHm_Chr2g0176011 RchiOBHm_Chr3g0487691 RchiOBHm_Chr5g0033111 RchiOBHm_Chr5g0038601
rosa_laevigata	RLG00000022373 RLG00000022905 RLG00000024502 RLG00000029641
rosa_multiflora	Rmu_co8267901.1_g000001 Rmu_sc0000217.1_g000013 Rmu_sc0000334.1_g000062 Rmu_sc0001786.1_g000006 Rmu_sc0003179.1_g000052 Rmu_sc0003238.1_g000029 Rmu_sc0003916.1_g000021 Rmu_sc0011915.1_g000016
rosa_roxburghii	Rroxscaffold_1G00043430 Rroxscaffold_2G00076850 Rroxscaffold_2G00135400 Rroxscaffold_3G00240570 Rroxscaffold_4G00312550 Rroxscaffold_4G00317940 Rroxscaffold_6G00404320 Rroxscaffold_7G00190770
rosa_rugosa	Rorug01G0103000 Rorug01G0103100 Rorug02G0212200.1 Rorug02G0589500 Rorug03G0296400 Rorug03G0296400
rosa_samantha	Rh1AG128700 Rh1BG098000 Rh1CG122500 Rh2BG680100 Rh2CG643000 Rh2DG502100 Rh2DG693800 Rh5CG577800 Rh6AG092600 Rh6DG075600
rosa_wichuraiana	Rw1G010480 Rw2G054820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	755
AccI	GTMKAC	1 cut(s)	479
AccII	CGCG	1 cut(s)	1046
AciI	CCGC	8 cut(s)	86, 485, 1044, 1114, 1127, 1619, 2004, 2162
AclI	AACGTT	1 cut(s)	1305
AclWI	GGATC	4 cut(s)	561, 624, 1125, 1287
AcoI	YGGCCR	1 cut(s)	961
AcsI	RAATTY	3 cut(s)	490, 1368, 1634
AcuI	CTGAAG	3 cut(s)	226, 336, 570
AfaI	GTAC	5 cut(s)	339, 687, 711, 1223, 2077
AfiI	CCNNNNNNNGG	3 cut(s)	577, 613, 976
AflII	CTTAAG	1 cut(s)	611
AflIII	ACRYGT	1 cut(s)	1667
AjiI	CACGTC	1 cut(s)	1285
AjnI	CCWGG	3 cut(s)	1217, 2221, 2295
AjuI	GAANNNNNNNTTGG	2 cut(s)	1607, 1639
AleI	CACNNNNGTG	2 cut(s)	761, 1322
AluBI	AGCT	8 cut(s)	102, 257, 320, 631, 884, 995, 1766, 1806
AluI	AGCT	8 cut(s)	102, 257, 320, 631, 884, 995, 1766, 1806
Alw21I	GWGCWC	1 cut(s)	1597
Alw26I	GTCTC	2 cut(s)	1407, 2076
Alw44I	GTGCAC	1 cut(s)	1593
AlwI	GGATC	4 cut(s)	561, 624, 1125, 1287
AoxI	GGCC	7 cut(s)	379, 579, 851, 961, 1072, 1144, 2276
ApaLI	GTGCAC	1 cut(s)	1593
ApeKI	GCWGC	9 cut(s)	450, 520, 1167, 1748, 1766, 1814, 2111, 2114, 2218
ApoI	RAATTY	3 cut(s)	490, 1368, 1634
ArsI	GACNNNNNNTTYG	2 cut(s)	1931, 1963
Asp700I	GAANNNNTTC	1 cut(s)	24
AspLEI	GCGC	2 cut(s)	350, 2037
AspS9I	GGNCC	5 cut(s)	265, 380, 862, 1483, 1918
AsuHPI	GGTGA	7 cut(s)	401, 668, 677, 740, 919, 2085, 2272
AsuII	TTCGAA	1 cut(s)	96
AvaII	GGWCC	4 cut(s)	265, 862, 1483, 1918
BaeGI	GKGCMC	2 cut(s)	1597, 1968
BalI	TGGCCA	1 cut(s)	963
BanI	GGYRCC	1 cut(s)	755
BauI	CACGAG	1 cut(s)	1558
Bbv12I	GWGCWC	1 cut(s)	1597
BbvI	GCAGC	9 cut(s)	437, 532, 1179, 1735, 1753, 1801, 2098, 2126, 2230
BccI	CCATC	3 cut(s)	380, 1656, 2146
BceAI	ACGGC	1 cut(s)	2102
BcgI	CGANNNNNNTGC	2 cut(s)	650, 684
BciT130I	CCWGG	3 cut(s)	1219, 2223, 2297
BclI	TGATCA	1 cut(s)	2170
BcoDI	GTCTC	2 cut(s)	1407, 2076
BfaI	CTAG	2 cut(s)	441, 1797
BfmI	CTRYAG	5 cut(s)	681, 1689, 1767, 1893, 2112
BfrI	CTTAAG	1 cut(s)	611
BglII	AGATCT	1 cut(s)	1212
BisI	GCNGC	9 cut(s)	451, 521, 1168, 1749, 1767, 1815, 2112, 2115, 2219
BlsI	GCNGC	9 cut(s)	452, 522, 1169, 1750, 1768, 1816, 2113, 2116, 2220
Bme1390I	CCNGG	3 cut(s)	1219, 2223, 2297
Bme18I	GGWCC	4 cut(s)	265, 862, 1483, 1918
BmgBI	CACGTC	1 cut(s)	1285
BmgT120I	GGNCC	5 cut(s)	265, 380, 862, 1483, 1918
BmiI	GGNNCC	6 cut(s)	126, 382, 757, 1919, 1920, 2136
BmrFI	CCNGG	3 cut(s)	1219, 2223, 2297
BmrI	ACTGGG	1 cut(s)	454
BmsI	GCATC	7 cut(s)	70, 173, 658, 900, 1025, 1169, 1453
BmuI	ACTGGG	1 cut(s)	454
BpmI	CTGGAG	1 cut(s)	1201
Bpu14I	TTCGAA	1 cut(s)	96
BsaAI	YACGTR	1 cut(s)	713
BsaJI	CCNNGG	2 cut(s)	751, 2295
BsaXI	ACNNNNNCTCC	4 cut(s)	1031, 1061, 1885, 1915
Bsc4I	CCNNNNNNNGG	3 cut(s)	577, 613, 976
Bse118I	RCCGGY	1 cut(s)	581
Bse1I	ACTGG	4 cut(s)	460, 823, 1486, 2096
Bse3DI	GCAATG	1 cut(s)	1824
BseBI	CCWGG	3 cut(s)	1219, 2223, 2297
BseDI	CCNNGG	2 cut(s)	751, 2295
BseGI	GGATG	4 cut(s)	19, 197, 793, 1243
BseLI	CCNNNNNNNGG	3 cut(s)	577, 613, 976
BseMI	GCAATG	1 cut(s)	1824
BseMII	CTCAG	1 cut(s)	1536
BseNI	ACTGG	4 cut(s)	460, 823, 1486, 2096
BseSI	GKGCMC	2 cut(s)	1597, 1968
BseXI	GCAGC	9 cut(s)	437, 532, 1179, 1735, 1753, 1801, 2098, 2126, 2230
BseYI	CCCAGC	2 cut(s)	88, 1122
BsgI	GTGCAG	1 cut(s)	1186
Bsh1236I	CGCG	1 cut(s)	1046
BshFI	GGCC	7 cut(s)	381, 581, 853, 963, 1074, 1146, 2278
BshNI	GGYRCC	1 cut(s)	755
BsiHKAI	GWGCWC	1 cut(s)	1597
BsiSI	CCGG	1 cut(s)	582
BslFI	GGGAC	3 cut(s)	130, 530, 1931
BslI	CCNNNNNNNGG	3 cut(s)	577, 613, 976
BsmAI	GTCTC	2 cut(s)	1407, 2076
BsmBI	CGTCTC	1 cut(s)	2076
BsmFI	GGGAC	3 cut(s)	130, 530, 1931
BsmI	GAATGC	1 cut(s)	898
BsnI	GGCC	7 cut(s)	381, 581, 853, 963, 1074, 1146, 2278
Bsp119I	TTCGAA	1 cut(s)	96
Bsp1286I	GDGCHC	2 cut(s)	1597, 1968
Bsp143I	GATC	9 cut(s)	109, 532, 566, 616, 1117, 1212, 1279, 2056, 2170
BspACI	CCGC	8 cut(s)	86, 485, 1044, 1114, 1127, 1619, 2004, 2162
BspANI	GGCC	7 cut(s)	381, 581, 853, 963, 1074, 1146, 2278
BspCNI	CTCAG	1 cut(s)	1537
BspFNI	CGCG	1 cut(s)	1046
BspHI	TCATGA	1 cut(s)	1392
BspLI	GGNNCC	6 cut(s)	126, 382, 757, 1919, 1920, 2136
BspMAI	CTGCAG	2 cut(s)	1771, 2116
BspPI	GGATC	4 cut(s)	561, 624, 1125, 1287
BspT104I	TTCGAA	1 cut(s)	96
BspT107I	GGYRCC	1 cut(s)	755
BspTI	CTTAAG	1 cut(s)	611
BsrDI	GCAATG	1 cut(s)	1824
BsrFI	RCCGGY	1 cut(s)	581
BsrI	ACTGG	4 cut(s)	460, 823, 1486, 2096
BssAI	RCCGGY	1 cut(s)	581
BssECI	CCNNGG	2 cut(s)	751, 2295
BssMI	GATC	9 cut(s)	109, 532, 566, 616, 1117, 1212, 1279, 2056, 2170
BssSI	CACGAG	1 cut(s)	1558
Bst2BI	CACGAG	1 cut(s)	1558
Bst2UI	CCWGG	3 cut(s)	1219, 2223, 2297
Bst4CI	ACNGT	6 cut(s)	289, 575, 685, 760, 1027, 2244
BstAFI	CTTAAG	1 cut(s)	611
BstAPI	GCANNNNNTGC	1 cut(s)	1745
BstBAI	YACGTR	1 cut(s)	713
BstBI	TTCGAA	1 cut(s)	96
BstC8I	GCNNGC	1 cut(s)	1363
BstDEI	CTNAG	4 cut(s)	258, 563, 1348, 1545
BstENI	CCTNNNNNAGG	1 cut(s)	611
BstF5I	GGATG	4 cut(s)	19, 197, 793, 1243
BstFNI	CGCG	1 cut(s)	1046
BstHHI	GCGC	2 cut(s)	350, 2037
BstKTI	GATC	9 cut(s)	112, 535, 569, 619, 1120, 1215, 1282, 2059, 2173
BstMAI	GTCTC	2 cut(s)	1407, 2076
BstMBI	GATC	9 cut(s)	109, 532, 566, 616, 1117, 1212, 1279, 2056, 2170
BstMWI	GCNNNNNNNGC	6 cut(s)	170, 607, 677, 1736, 1745, 1772
BstNI	CCWGG	3 cut(s)	1219, 2223, 2297
BstNSI	RCATGY	4 cut(s)	332, 601, 2043, 2275
BstSCI	CCNGG	3 cut(s)	1217, 2221, 2295
BstSFI	CTRYAG	5 cut(s)	681, 1689, 1767, 1893, 2112
BstSLI	GKGCMC	2 cut(s)	1597, 1968
BstSNI	TACGTA	1 cut(s)	713
BstUI	CGCG	1 cut(s)	1046
BstV1I	GCAGC	9 cut(s)	437, 532, 1179, 1735, 1753, 1801, 2098, 2126, 2230
BstX2I	RGATCY	3 cut(s)	566, 616, 1212
BstXI	CCANNNNNNTGG	1 cut(s)	1868
BstYI	RGATCY	3 cut(s)	566, 616, 1212
BsuRI	GGCC	7 cut(s)	381, 581, 853, 963, 1074, 1146, 2278
BtgZI	GCGATG	1 cut(s)	1675
BtrI	CACGTC	1 cut(s)	1285
BtsCI	GGATG	4 cut(s)	19, 197, 793, 1243
BtsI	GCAGTG	1 cut(s)	308
BtsIMutI	CAGTG	3 cut(s)	40, 308, 1612
Cac8I	GCNNGC	1 cut(s)	1363
CciI	TCATGA	1 cut(s)	1392
CfoI	GCGC	2 cut(s)	350, 2037
Cfr10I	RCCGGY	1 cut(s)	581
Cfr13I	GGNCC	5 cut(s)	265, 380, 862, 1483, 1918
Csp6I	GTAC	5 cut(s)	338, 686, 710, 1222, 2076
CviQI	GTAC	5 cut(s)	338, 686, 710, 1222, 2076
DdeI	CTNAG	4 cut(s)	258, 563, 1348, 1545
DpnI	GATC	9 cut(s)	111, 534, 568, 618, 1119, 1214, 1281, 2058, 2172
DpnII	GATC	9 cut(s)	109, 532, 566, 616, 1117, 1212, 1279, 2056, 2170
DraI	TTTAAA	2 cut(s)	1204, 1782
EaeI	YGGCCR	1 cut(s)	961
EciI	GGCGGA	1 cut(s)	1142
Eco105I	TACGTA	1 cut(s)	713
Eco147I	AGGCCT	1 cut(s)	853
Eco47I	GGWCC	4 cut(s)	265, 862, 1483, 1918
Eco57I	CTGAAG	3 cut(s)	226, 336, 570
EcoNI	CCTNNNNNAGG	1 cut(s)	611
EcoO109I	RGGNCCY	3 cut(s)	265, 380, 1918
EcoRII	CCWGG	3 cut(s)	1217, 2221, 2295
Esp3I	CGTCTC	1 cut(s)	2076
FaqI	GGGAC	3 cut(s)	130, 530, 1931
FauI	CCCGC	2 cut(s)	1107, 2155
FauNDI	CATATG	1 cut(s)	1710
FbaI	TGATCA	1 cut(s)	2170
FblI	GTMKAC	1 cut(s)	479
Fnu4HI	GCNGC	9 cut(s)	451, 521, 1168, 1749, 1767, 1815, 2112, 2115, 2219
FokI	GGATG	4 cut(s)	26, 204, 800, 1250
Fsp4HI	GCNGC	9 cut(s)	451, 521, 1168, 1749, 1767, 1815, 2112, 2115, 2219
FspBI	CTAG	2 cut(s)	441, 1797
GlaI	GCGC	2 cut(s)	349, 2036
GluI	GCNGC	9 cut(s)	451, 521, 1168, 1749, 1767, 1815, 2112, 2115, 2219
GsaI	CCCAGC	2 cut(s)	92, 1126
GsuI	CTGGAG	1 cut(s)	1201
HaeIII	GGCC	7 cut(s)	381, 581, 853, 963, 1074, 1146, 2278
HapII	CCGG	1 cut(s)	582
HhaI	GCGC	2 cut(s)	350, 2037
Hin6I	GCGC	2 cut(s)	348, 2035
HinP1I	GCGC	2 cut(s)	348, 2035
HindIII	AAGCTT	3 cut(s)	100, 629, 1804
HinfI	GANTC	6 cut(s)	369, 603, 833, 1040, 1267, 1574
HpaII	CCGG	1 cut(s)	582
HphI	GGTGA	7 cut(s)	401, 668, 677, 740, 919, 2085, 2272
Hpy166II	GTNNAC	4 cut(s)	480, 1224, 1595, 2201
Hpy188I	TCNGA	9 cut(s)	67, 169, 316, 979, 1237, 1579, 1633, 1650, 2019
Hpy188III	TCNNGA	8 cut(s)	530, 1393, 1481, 1544, 1932, 2065, 2126, 2147
Hpy8I	GTNNAC	4 cut(s)	480, 1224, 1595, 2201
HpyCH4III	ACNGT	6 cut(s)	289, 575, 685, 760, 1027, 2244
HpyCH4IV	ACGT	5 cut(s)	712, 1284, 1305, 1504, 1669
HpyF10VI	GCNNNNNNNGC	6 cut(s)	170, 607, 677, 1736, 1745, 1772
HpyF3I	CTNAG	4 cut(s)	258, 563, 1348, 1545
HpySE526I	ACGT	5 cut(s)	712, 1284, 1305, 1504, 1669
HspAI	GCGC	2 cut(s)	348, 2035
KflI	GGGWCCC	1 cut(s)	1918
Ksp22I	TGATCA	1 cut(s)	2170
Kzo9I	GATC	9 cut(s)	109, 532, 566, 616, 1117, 1212, 1279, 2056, 2170
Lsp1109I	GCAGC	9 cut(s)	437, 532, 1179, 1735, 1753, 1801, 2098, 2126, 2230
LweI	GCATC	7 cut(s)	70, 173, 658, 900, 1025, 1169, 1453
MaeI	CTAG	2 cut(s)	441, 1797
MaeII	ACGT	5 cut(s)	712, 1284, 1305, 1504, 1669
MaeIII	GTNAC	6 cut(s)	35, 656, 740, 923, 1292, 2024
MalI	GATC	9 cut(s)	111, 534, 568, 618, 1119, 1214, 1281, 2058, 2172
MboI	GATC	9 cut(s)	109, 532, 566, 616, 1117, 1212, 1279, 2056, 2170
MboII	GAAGA	6 cut(s)	83, 441, 901, 992, 1996, 2066
MfeI	CAATTG	3 cut(s)	1004, 1467, 1905
MflI	RGATCY	3 cut(s)	566, 616, 1212
MhlI	GDGCHC	2 cut(s)	1597, 1968
MlsI	TGGCCA	1 cut(s)	963
MluNI	TGGCCA	1 cut(s)	963
MlyI	GAGTC	1 cut(s)	1049
MmeI	TCCRAC	2 cut(s)	1215, 1815
Mox20I	TGGCCA	1 cut(s)	963
MroXI	GAANNNNTTC	1 cut(s)	24
MscI	TGGCCA	1 cut(s)	963
MseI	TTAA	8 cut(s)	612, 819, 987, 1203, 1274, 1308, 1398, 1781
MslI	CAYNNNNRTG	3 cut(s)	761, 1177, 1322
Msp20I	TGGCCA	1 cut(s)	963
MspA1I	CMGCKG	1 cut(s)	88
MspCI	CTTAAG	1 cut(s)	611
MspI	CCGG	1 cut(s)	582
MspR9I	CCNGG	3 cut(s)	1219, 2223, 2297
MunI	CAATTG	3 cut(s)	1004, 1467, 1905
Mva1269I	GAATGC	1 cut(s)	898
MvaI	CCWGG	3 cut(s)	1219, 2223, 2297
MvnI	CGCG	1 cut(s)	1046
MwoI	GCNNNNNNNGC	6 cut(s)	170, 607, 677, 1736, 1745, 1772
NdeI	CATATG	1 cut(s)	1710
NdeII	GATC	9 cut(s)	109, 532, 566, 616, 1117, 1212, 1279, 2056, 2170
NlaIV	GGNNCC	6 cut(s)	126, 382, 757, 1919, 1920, 2136
NmuCI	GTSAC	5 cut(s)	35, 656, 923, 1292, 2024
NspI	RCATGY	4 cut(s)	332, 601, 2043, 2275
NspV	TTCGAA	1 cut(s)	96
OliI	CACNNNNGTG	2 cut(s)	761, 1322
PagI	TCATGA	1 cut(s)	1392
PceI	AGGCCT	1 cut(s)	853
PctI	GAATGC	1 cut(s)	898
PdmI	GAANNNNTTC	1 cut(s)	24
PfeI	GAWTC	5 cut(s)	369, 603, 833, 1267, 1574
PflFI	GACNNNGTC	1 cut(s)	2010
PkrI	GCNGC	9 cut(s)	452, 522, 1169, 1750, 1768, 1816, 2113, 2116, 2220
PleI	GAGTC	1 cut(s)	1048
PpsI	GAGTC	1 cut(s)	1048
Ppu21I	YACGTR	1 cut(s)	713
PpuMI	RGGWCCY	2 cut(s)	265, 1918
Psp1406I	AACGTT	1 cut(s)	1305
Psp5II	RGGWCCY	2 cut(s)	265, 1918
Psp6I	CCWGG	3 cut(s)	1217, 2221, 2295
PspFI	CCCAGC	2 cut(s)	88, 1122
PspGI	CCWGG	3 cut(s)	1217, 2221, 2295
PspN4I	GGNNCC	6 cut(s)	126, 382, 757, 1919, 1920, 2136
PspPI	GGNCC	5 cut(s)	265, 380, 862, 1483, 1918
PspPPI	RGGWCCY	2 cut(s)	265, 1918
PstI	CTGCAG	2 cut(s)	1771, 2116
PsuI	RGATCY	3 cut(s)	566, 616, 1212
PsyI	GACNNNGTC	1 cut(s)	2010
RsaI	GTAC	5 cut(s)	339, 687, 711, 1223, 2077
RsaNI	GTAC	5 cut(s)	338, 686, 710, 1222, 2076
RseI	CAYNNNNRTG	3 cut(s)	761, 1177, 1322
SaqAI	TTAA	8 cut(s)	612, 819, 987, 1203, 1274, 1308, 1398, 1781
SatI	GCNGC	9 cut(s)	451, 521, 1168, 1749, 1767, 1815, 2112, 2115, 2219
Sau3AI	GATC	9 cut(s)	109, 532, 566, 616, 1117, 1212, 1279, 2056, 2170
Sau96I	GGNCC	5 cut(s)	265, 380, 862, 1483, 1918
SchI	GAGTC	1 cut(s)	1049
ScrFI	CCNGG	3 cut(s)	1219, 2223, 2297
SduI	GDGCHC	2 cut(s)	1597, 1968
SfaNI	GCATC	7 cut(s)	70, 173, 658, 900, 1025, 1169, 1453
SfcI	CTRYAG	5 cut(s)	681, 1689, 1767, 1893, 2112
SfuI	TTCGAA	1 cut(s)	96
SinI	GGWCC	4 cut(s)	265, 862, 1483, 1918
SmiMI	CAYNNNNRTG	3 cut(s)	761, 1177, 1322
SmlI	CTYRAG	1 cut(s)	611
SmoI	CTYRAG	1 cut(s)	611
SnaBI	TACGTA	1 cut(s)	713
SseBI	AGGCCT	1 cut(s)	853
SsiI	CCGC	8 cut(s)	86, 485, 1044, 1114, 1127, 1619, 2004, 2162
SspMI	CTAG	2 cut(s)	441, 1797
StuI	AGGCCT	1 cut(s)	853
StyD4I	CCNGG	3 cut(s)	1217, 2221, 2295
TaaI	ACNGT	6 cut(s)	289, 575, 685, 760, 1027, 2244
TaiI	ACGT	5 cut(s)	715, 1287, 1308, 1507, 1672
TaqI	TCGA	7 cut(s)	96, 295, 407, 831, 1141, 1525, 2064
TaqII	GACCGA	1 cut(s)	850
TatI	WGTACW	1 cut(s)	685
TfiI	GAWTC	5 cut(s)	369, 603, 833, 1267, 1574
Tru1I	TTAA	8 cut(s)	612, 819, 987, 1203, 1274, 1308, 1398, 1781
Tru9I	TTAA	8 cut(s)	612, 819, 987, 1203, 1274, 1308, 1398, 1781
TscAI	CASTG	3 cut(s)	40, 308, 1612
TseFI	GTSAC	5 cut(s)	35, 656, 923, 1292, 2024
TseI	GCWGC	9 cut(s)	450, 520, 1167, 1748, 1766, 1814, 2111, 2114, 2218
Tsp45I	GTSAC	5 cut(s)	35, 656, 923, 1292, 2024
TspGWI	ACGGA	2 cut(s)	117, 2100
TspRI	CASTG	3 cut(s)	40, 308, 1612
Tth111I	GACNNNGTC	1 cut(s)	2010
Vha464I	CTTAAG	1 cut(s)	611
VneI	GTGCAC	1 cut(s)	1593
VpaK11BI	GGWCC	4 cut(s)	265, 862, 1483, 1918
XagI	CCTNNNNNAGG	1 cut(s)	611
XapI	RAATTY	3 cut(s)	490, 1368, 1634
XceI	RCATGY	4 cut(s)	332, 601, 2043, 2275
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1254
XmiI	GTMKAC	1 cut(s)	479
XmnI	GAANNNNTTC	1 cut(s)	24
XspI	CTAG	2 cut(s)	441, 1797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.