Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000799

Physical Location & Seq

Genomic Coordinates Reverse (-)

49280680 .. 49285113

Gene Structure 4434 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0386200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGATCGGCCAAGTTTGGGTCTTGACTTTCTTGAGGGAAGGTCTGACCATGGCGCTTCTAACCCTCCACCTACTCAGCCTGCAACTTTGGTCAAAACTTTTGCTTCTGTCCTGTCGGCGTCGGTTGAGACGCAAGTTAACCTTTTTCAGCTCCCTCAACCTACCCGTCGAGGAGATGTTACCTTTGTGAAAATCAATGAAGCTTTGTACCAGGAGCAGGTAGGTCGTCTCCTCCTTCGCAAAGGCTCCAAGCCCATGACGACGGAAATTCTTAAAAAGTCCCTTCAATCTTTATGGAATCCATCCTCTCCCTGGCGTCTTGTACCTCTTGGAAAGGGATATTTTGACATTCACTTTAATTCTGAAATGGACATGAGAAGAATATGGGGTGGTGGTACTTGCACGTTGGAGTCTGGAATCCTTCGCCTTACTCAGTGGAAGCCGGACTTCAAACCTGGTCAGGAATTGCCTCAAACGCACGCTCAGGTGTGGATTCAAATCTCTGGACTCAGTCAAGAATATTGGCATCCCCAACTTATTATGGAGATTGCAATGGGTGTGGGAACGCCGTTGCAATTGGATCACCATATAAAGGAAAGGTCATTTGGTTATTATGCTCGGGTTTTGGTGGACATAGATCTACTGGGACATCTTCCTACTTCTATCATGGTGGAGCAGGAGAATCATTGCTTTTTAGTTGGGATTGTGTACGAGAGGCTTCCGCCAAAGTGTACTCACTGTGGGTTGGTTGGGCATTCCATTGATAAGTGCCGTCAAATTTCAGGGCCAAAAGTTCAGCAATCTAGACATCTCCAGATTAATATGCCTGTCAGACGGGAATATCGTGCCAAACTACCGAATCAAAGGTCAATGGAGAACTCGTTGGACTCCCCTGCCCAGCCTCAACCTTCAGAGGTGGTTTCTGATGCAACTATTAATGTTATTTCAGGGGTGGTCTCTCAAAACCTGGTTGCTCATAGCGGTACTAATGAATTTTTTGAGGATCCGGTTGGTATCACGGTCGCATCCGATGGTGTAGAAATTTTGGTTGTTAATGAAATTTTTGAGGAGGCTGCTCTTCATCATATTCACCAAATTGCTGATATTGTAATGAATGAGACTGAGGTTCTATCTGTAGGTGCAGTTAATCATGAGGTTAACACAGTTCATGATGGTGTGGGGGGTTCTCCTTCAAAATCATGGTCCACAATTTTCTCGGAGGAGCGGGCTGCTTCAGCTATTGAGTCGTTCCCCCCTGGTTATGGACCACTGGATTCACGTTCGGCTGTTGAAATTGATGTTGTTGCAAGATTTGTTAATGGGGAGGATATTGCTGGTTTCCTTCCCGTTCTCACCATTTCTCAAAAGAAACAGTTGCGTAGGGAGCAAAAGCGGATTGCTAGCGCTCGTTCTGAGCCATACCCTTCTCGGCATATTACTGTGCAGGTTTCTTTTGAAGCCGCTACTAGCCAGTTTTCCTTTGTTTATGCTTCTACTTCTATTGTGAAACGAAGAGAGCTTTGGAGCGAGCTGTTGGATTTTCGTTCTCGAACACAAGTTCCTTGGATGTGTATTGGTGATTTCAATACTGTCCTTGGTGCTCATGAACAATCTGGGGGTAATCTACCAAATAGACTTTCTTGTCAAGAATTTCAAAATTCTACTGCTCTATGTGATTTCACCCATGTTGACTCTGCTGGAGCTTTTTTCACTTGGTCAAATGGAAGGGTTTTTGGTCATATTGAAAAGCGTCTTGACAGATCGATGTGTGATGATCGTTGGTTGGAAGCATGGCCTTTTACCAGTTGTCTTACTCTCCCACGGATGGTTTCTGATCACAATGGTCTTCTCTTCACGGCTAATAAGTCTATGCTAAACGGTCCAAAGCCATTCCGCTTTCAGACACTGTGGACTCTTCATTCTGGCTTTAAAGAGTTGGTTGCTCATTGCTGGCGTAACTCACAAGCTGTGGGCTGTCCTATGTTTGTTACTCTTCAAAAACTGAAGGATCTCAAGCATTGTCTTAAGAATTGGAACAATCCAGTGTTCGGCAATGTTCATGTAATGTTGGAGGATGCCCGCAGCCGTCTAACTTTGGTTCAACAAGAAATCTCTAGTAATGGGATTATTAATTTGCAGCGATTAGAGGAGGAGTCCATGGCCAAGAAAGCCGTTCTTGATGGGGTAAAAATGCAAGAGGCTTTTTGGCGGGATCGAGCTCGTGTCAAGTGGTTAACGGAGGGGGATCGTTGTACTGCTTTCTTTCACAATTTTGCATGGGTAAGGGCAGCTAATTCTCGAGTTAATAGTCTCAAGGTTGGGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0010468 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0031974 GO:0031981 GO:0034641 GO:0034645 GO:0042623 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

DEAD DUF4283 Helicase_C

Protein Analysis

775

Amino Acids

87.2

Weight (kDa)

7.15

Isoelectric Point (pI)

52.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4283	PF14111	88 - 153	2.6e-06	Domain of unknown function (DUF4283)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000799)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54270 AT1G54270 AT1G72730 AT3G13920 AT3G13920 AT3G13920 AT3G13920 AT3G13920
fragaria_vesca	FvH4_1g07920 FvH4_2g31520 FvH4_6g34120 FvH4_6g34120
malus_domestica	MD02G1082700.v1.1 MD08G1065300.v1.1 MD09G1189100.v1.1 MD15G1210800.v1.1 MD17G1172700.v1.1
prunus_persica	Prupe.1G409000_v2.0.a1 Prupe.3G045500_v2.0.a1 Prupe.3G045500_v2.0.a1 Prupe.7G206000_v2.0.a1
pyrus_communis	pycom02g06560 pycom08g05400 pycom09g10600 pycom15g18670 pycom17g17070 pycom17g17080
rosa_chinensis	RchiOBHm_Chr2g0093791 RchiOBHm_Chr2g0144411 RchiOBHm_Chr2g0144421 RchiOBHm_Chr6g0311241
rosa_laevigata	RLG00000010423 RLG00000016437 RLG00000020078 RLG00000020079 RLG00000030391
rosa_multiflora	Rmu_co8454423.1_g000001 Rmu_sc0002126.1_g000004 Rmu_sc0003475.1_g000010 Rmu_sc0012046.1_g000007 Rmu_sc0012116.1_g000001 Rmu_sc0020003.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101330 Rroxscaffold_2G00147800 Rroxscaffold_7G00157830
rosa_rugosa	Rorug02G0040100 Rorug02G0040100 Rorug02G0386200 Rorug02G0386300 Rorug02G0386400 Rorug06G0386800 Rorug06G0386900
rosa_samantha	Rh2AG086300 Rh2AG438600 Rh2AG438700 Rh2BG449000 Rh2CG089000 Rh2CG425700 Rh2CG425800 Rh2DG084700 Rh2DG084800 Rh2DG458700 Rh2DG458800 Rh6BG512000 Rh6CG517800 Rh6DG503900
rosa_wichuraiana	Rw2G035870 Rw2G035880 Rw6G043660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1641
Acc36I	ACCTGC	2 cut(s)	208, 1435
AccBSI	CCGCTC	1 cut(s)	1225
AciI	CCGC	8 cut(s)	722, 981, 1225, 1393, 1461, 1894, 2080, 2209
AclWI	GGATC	7 cut(s)	12, 588, 998, 1011, 2016, 2220, 2253
AcoI	YGGCCR	2 cut(s)	8, 2160
AcsI	RAATTY	7 cut(s)	267, 777, 992, 1041, 1059, 1649, 1657
AcuI	CTGAAG	3 cut(s)	894, 1218, 2024
AcyI	GRCGYC	2 cut(s)	119, 316
AfaI	GTAC	7 cut(s)	209, 324, 397, 710, 733, 985, 2254
AfeI	AGCGCT	1 cut(s)	1405
AfiI	CCNNNNNNNGG	7 cut(s)	17, 217, 312, 592, 1262, 1825, 2048
AflII	CTTAAG	1 cut(s)	2024
AjnI	CCWGG	5 cut(s)	210, 311, 454, 966, 1255
AjuI	GAANNNNNNNTTGG	6 cut(s)	588, 620, 1504, 1536, 1621, 1653
AloI	GAACNNNNNNTCC	2 cut(s)	1543, 1575
AluBI	AGCT	9 cut(s)	151, 203, 1238, 1519, 1531, 1703, 1967, 2219, 2291
AluI	AGCT	9 cut(s)	151, 203, 1238, 1519, 1531, 1703, 1967, 2219, 2291
Alw21I	GWGCWC	2 cut(s)	1603, 2221
Alw26I	GTCTC	5 cut(s)	122, 233, 961, 1112, 2315
AlwI	GGATC	7 cut(s)	12, 588, 998, 1011, 2016, 2220, 2253
AlwNI	CAGNNNCTG	1 cut(s)	1906
Ama87I	CYCGRG	2 cut(s)	618, 2298
Aor51HI	AGCGCT	1 cut(s)	1405
AoxI	GGCC	4 cut(s)	8, 785, 1793, 2160
ApeKI	GCWGC	5 cut(s)	1073, 1229, 2082, 2137, 2288
ApoI	RAATTY	7 cut(s)	267, 777, 992, 1041, 1059, 1649, 1657
ArsI	GACNNNNNNTTYG	4 cut(s)	851, 883, 1187, 1219
AseI	ATTAAT	3 cut(s)	819, 936, 2130
AspLEI	GCGC	2 cut(s)	56, 1406
AspS9I	GGNCC	4 cut(s)	785, 1203, 1265, 1880
AsuHPI	GGTGA	5 cut(s)	575, 1082, 1345, 1589, 1672
AsuNHI	GCTAGC	1 cut(s)	1400
AvaI	CYCGRG	2 cut(s)	618, 2298
AvaII	GGWCC	3 cut(s)	1203, 1265, 1880
BalI	TGGCCA	1 cut(s)	2162
BamHI	GGATCC	1 cut(s)	1003
BanII	GRGCYC	1 cut(s)	2221
BauI	CACGAG	1 cut(s)	2220
BbsI	GAAGAC	1 cut(s)	1838
Bbv12I	GWGCWC	2 cut(s)	1603, 2221
BbvI	GCAGC	5 cut(s)	1060, 1216, 2094, 2149, 2300
BccI	CCATC	5 cut(s)	310, 1025, 1166, 1819, 2174
BceAI	ACGGC	5 cut(s)	553, 756, 1872, 2070, 2156
BcgI	CGANNNNNNTGC	2 cut(s)	206, 240
BciT130I	CCWGG	5 cut(s)	212, 313, 456, 968, 1257
BclI	TGATCA	1 cut(s)	1834
BcoDI	GTCTC	5 cut(s)	122, 233, 961, 1112, 2315
BfaI	CTAG	4 cut(s)	804, 1401, 1467, 2115
BfmI	CTRYAG	1 cut(s)	1134
BfoI	RGCGCY	2 cut(s)	57, 1407
BfrI	CTTAAG	1 cut(s)	2024
BfuAI	ACCTGC	2 cut(s)	208, 1435
BglII	AGATCT	1 cut(s)	637
BisI	GCNGC	6 cut(s)	1074, 1230, 1461, 2083, 2138, 2289
BlsI	GCNGC	6 cut(s)	1075, 1231, 1462, 2084, 2139, 2290
Bme1390I	CCNGG	5 cut(s)	212, 313, 456, 968, 1257
Bme18I	GGWCC	3 cut(s)	1203, 1265, 1880
BmeT110I	CYCGRG	2 cut(s)	618, 2298
BmgT120I	GGNCC	4 cut(s)	785, 1203, 1265, 1880
BmiI	GGNNCC	2 cut(s)	247, 1005
BmrFI	CCNGG	5 cut(s)	212, 313, 456, 968, 1257
BmrI	ACTGGG	1 cut(s)	653
BmsI	GCATC	4 cut(s)	535, 916, 1034, 2065
BmtI	GCTAGC	1 cut(s)	1404
BmuI	ACTGGG	1 cut(s)	653
BpiI	GAAGAC	1 cut(s)	1838
BpmI	CTGGAG	2 cut(s)	797, 1719
Bpu10I	CCTNAGC	1 cut(s)	483
BpuEI	CTTGAG	3 cut(s)	53, 1997, 2297
Bsa29I	ATCGAT	1 cut(s)	1763
BsaBI	GATNNNNATC	1 cut(s)	497
BsaHI	GRCGYC	2 cut(s)	119, 316
BsaI	GGTCTC	1 cut(s)	961
BsaJI	CCNNGG	7 cut(s)	49, 311, 1255, 1562, 1594, 1820, 2157
BsaWI	WCCGGW	1 cut(s)	1006
BsaXI	ACNNNNNCTCC	2 cut(s)	866, 896
Bsc4I	CCNNNNNNNGG	7 cut(s)	17, 217, 312, 592, 1262, 1825, 2048
Bse1I	ACTGG	5 cut(s)	648, 1275, 1471, 1803, 2042
Bse3DI	GCAATG	4 cut(s)	558, 685, 1945, 2059
Bse8I	GATNNNNATC	1 cut(s)	497
BseBI	CCWGG	5 cut(s)	212, 313, 456, 968, 1257
BseCI	ATCGAT	1 cut(s)	1763
BseDI	CCNNGG	7 cut(s)	49, 311, 1255, 1562, 1594, 1820, 2157
BseGI	GGATG	7 cut(s)	302, 526, 1025, 1572, 1830, 2080, 2328
BseJI	GATNNNNATC	1 cut(s)	497
BseLI	CCNNNNNNNGG	7 cut(s)	17, 217, 312, 592, 1262, 1825, 2048
BseMI	GCAATG	4 cut(s)	558, 685, 1945, 2059
BseMII	CTCAG	6 cut(s)	89, 446, 497, 523, 1113, 1404
BseNI	ACTGG	5 cut(s)	648, 1275, 1471, 1803, 2042
BseRI	GAGGAG	6 cut(s)	186, 221, 1082, 1235, 2162, 2165
BseXI	GCAGC	5 cut(s)	1060, 1216, 2094, 2149, 2300
BseYI	CCCAGC	1 cut(s)	897
BsgI	GTGCAG	2 cut(s)	1161, 1463
Bsh1285I	CGRYCG	1 cut(s)	1023
BshFI	GGCC	4 cut(s)	10, 787, 1795, 2162
BshVI	ATCGAT	1 cut(s)	1763
BsiEI	CGRYCG	1 cut(s)	1023
BsiHKAI	GWGCWC	2 cut(s)	1603, 2221
BsiHKCI	CYCGRG	2 cut(s)	618, 2298
BsiSI	CCGG	2 cut(s)	443, 1007
BslFI	GGGAC	2 cut(s)	265, 660
BslI	CCNNNNNNNGG	7 cut(s)	17, 217, 312, 592, 1262, 1825, 2048
BsmAI	GTCTC	5 cut(s)	122, 233, 961, 1112, 2315
BsmBI	CGTCTC	2 cut(s)	122, 233
BsmFI	GGGAC	2 cut(s)	265, 660
BsmI	GAATGC	1 cut(s)	754
BsnI	GGCC	4 cut(s)	10, 787, 1795, 2162
Bso31I	GGTCTC	1 cut(s)	961
BsoBI	CYCGRG	2 cut(s)	618, 2298
Bsp1286I	GDGCHC	2 cut(s)	1603, 2221
Bsp19I	CCATGG	2 cut(s)	49, 2157
BspACI	CCGC	8 cut(s)	722, 981, 1225, 1393, 1461, 1894, 2080, 2209
BspANI	GGCC	4 cut(s)	10, 787, 1795, 2162
BspCNI	CTCAG	6 cut(s)	88, 445, 496, 522, 1114, 1405
BspDI	ATCGAT	1 cut(s)	1763
BspHI	TCATGA	3 cut(s)	1150, 1168, 1603
BspLI	GGNNCC	2 cut(s)	247, 1005
BspMI	ACCTGC	2 cut(s)	208, 1435
BspOI	GCTAGC	1 cut(s)	1404
BspPI	GGATC	7 cut(s)	12, 588, 998, 1011, 2016, 2220, 2253
BspQI	GCTCTTC	1 cut(s)	1083
BspTI	CTTAAG	1 cut(s)	2024
BspTNI	GGTCTC	1 cut(s)	961
BsrBI	CCGCTC	1 cut(s)	1225
BsrDI	GCAATG	4 cut(s)	558, 685, 1945, 2059
BsrI	ACTGG	5 cut(s)	648, 1275, 1471, 1803, 2042
BssECI	CCNNGG	7 cut(s)	49, 311, 1255, 1562, 1594, 1820, 2157
BssNI	GRCGYC	2 cut(s)	119, 316
BssSI	CACGAG	1 cut(s)	2220
BssT1I	CCWWGG	4 cut(s)	49, 1562, 1594, 2157
Bst2BI	CACGAG	1 cut(s)	2220
Bst2UI	CCWGG	5 cut(s)	212, 313, 456, 968, 1257
Bst4CI	ACNGT	8 cut(s)	740, 1021, 1165, 1374, 1441, 1591, 1880, 1908
Bst6I	CTCTTC	5 cut(s)	1083, 1507, 1856, 1920, 1998
BstACI	GRCGYC	2 cut(s)	119, 316
BstAFI	CTTAAG	1 cut(s)	2024
BstC8I	GCNNGC	7 cut(s)	81, 480, 1227, 1402, 1529, 1952, 2080
BstDEI	CTNAG	6 cut(s)	75, 432, 483, 509, 1122, 1413
BstDSI	CCRYGG	3 cut(s)	49, 1820, 2157
BstF5I	GGATG	7 cut(s)	302, 526, 1025, 1572, 1830, 2080, 2328
BstH2I	RGCGCY	2 cut(s)	57, 1407
BstHHI	GCGC	2 cut(s)	56, 1406
BstMAI	GTCTC	5 cut(s)	122, 233, 961, 1112, 2315
BstMCI	CGRYCG	1 cut(s)	1023
BstMWI	GCNNNNNNNGC	4 cut(s)	475, 1235, 1384, 2168
BstNI	CCWGG	5 cut(s)	212, 313, 456, 968, 1257
BstSCI	CCNGG	5 cut(s)	210, 311, 454, 966, 1255
BstSFI	CTRYAG	1 cut(s)	1134
BstV1I	GCAGC	5 cut(s)	1060, 1216, 2094, 2149, 2300
BstV2I	GAAGAC	1 cut(s)	1838
BstX2I	RGATCY	3 cut(s)	637, 1003, 2008
BstYI	RGATCY	3 cut(s)	637, 1003, 2008
Bsu15I	ATCGAT	1 cut(s)	1763
BsuRI	GGCC	4 cut(s)	10, 787, 1795, 2162
BsuTUI	ATCGAT	1 cut(s)	1763
BtgI	CCRYGG	3 cut(s)	49, 1820, 2157
BtsCI	GGATG	7 cut(s)	302, 526, 1025, 1572, 1830, 2080, 2328
BtsIMutI	CAGTG	5 cut(s)	440, 736, 1268, 1904, 2049
BveI	ACCTGC	2 cut(s)	208, 1435
Cac8I	GCNNGC	7 cut(s)	81, 480, 1227, 1402, 1529, 1952, 2080
CaiI	CAGNNNCTG	1 cut(s)	1906
CciI	TCATGA	3 cut(s)	1150, 1168, 1603
CfoI	GCGC	2 cut(s)	56, 1406
Cfr13I	GGNCC	4 cut(s)	785, 1203, 1265, 1880
ClaI	ATCGAT	1 cut(s)	1763
CseI	GACGC	4 cut(s)	108, 139, 305, 1739
CsiI	ACCWGGT	2 cut(s)	454, 966
Csp6I	GTAC	7 cut(s)	208, 323, 396, 709, 732, 984, 2253
CspCI	CAANNNNNGTGG	2 cut(s)	540, 575
CviQI	GTAC	7 cut(s)	208, 323, 396, 709, 732, 984, 2253
DdeI	CTNAG	6 cut(s)	75, 432, 483, 509, 1122, 1413
DraI	TTTAAA	1 cut(s)	1930
DrdI	GACNNNNNNGTC	1 cut(s)	1641
DseDI	GACNNNNNNGTC	1 cut(s)	1641
EaeI	YGGCCR	2 cut(s)	8, 2160
Eam1104I	CTCTTC	5 cut(s)	1083, 1507, 1856, 1920, 1998
EarI	CTCTTC	5 cut(s)	1083, 1507, 1856, 1920, 1998
EciI	GGCGGA	1 cut(s)	711
Ecl136II	GAGCTC	1 cut(s)	2219
Eco130I	CCWWGG	4 cut(s)	49, 1562, 1594, 2157
Eco24I	GRGCYC	1 cut(s)	2221
Eco31I	GGTCTC	1 cut(s)	961
Eco47I	GGWCC	3 cut(s)	1203, 1265, 1880
Eco47III	AGCGCT	1 cut(s)	1405
Eco53kI	GAGCTC	1 cut(s)	2219
Eco57I	CTGAAG	3 cut(s)	894, 1218, 2024
Eco88I	CYCGRG	2 cut(s)	618, 2298
EcoICRI	GAGCTC	1 cut(s)	2219
EcoRII	CCWGG	5 cut(s)	210, 311, 454, 966, 1255
EcoT14I	CCWWGG	4 cut(s)	49, 1562, 1594, 2157
EcoT38I	GRGCYC	1 cut(s)	2221
ErhI	CCWWGG	4 cut(s)	49, 1562, 1594, 2157
Esp3I	CGTCTC	2 cut(s)	122, 233
FalI	AAGNNNNNCTT	6 cut(s)	126, 158, 431, 463, 2160, 2192
FaqI	GGGAC	2 cut(s)	265, 660
FauI	CCCGC	3 cut(s)	1218, 2087, 2202
FbaI	TGATCA	1 cut(s)	1834
Fnu4HI	GCNGC	6 cut(s)	1074, 1230, 1461, 2083, 2138, 2289
FokI	GGATG	6 cut(s)	289, 513, 1012, 1579, 1837, 2087
FriOI	GRGCYC	1 cut(s)	2221
Fsp4HI	GCNGC	6 cut(s)	1074, 1230, 1461, 2083, 2138, 2289
FspBI	CTAG	4 cut(s)	804, 1401, 1467, 2115
GlaI	GCGC	2 cut(s)	55, 1405
GluI	GCNGC	6 cut(s)	1074, 1230, 1461, 2083, 2138, 2289
GsaI	CCCAGC	1 cut(s)	901
GsuI	CTGGAG	2 cut(s)	797, 1719
HaeII	RGCGCY	2 cut(s)	57, 1407
HaeIII	GGCC	4 cut(s)	10, 787, 1795, 2162
HapII	CCGG	2 cut(s)	443, 1007
HgaI	GACGC	4 cut(s)	108, 139, 305, 1739
HhaI	GCGC	2 cut(s)	56, 1406
Hin1I	GRCGYC	2 cut(s)	119, 316
Hin6I	GCGC	2 cut(s)	54, 1404
HinP1I	GCGC	2 cut(s)	54, 1404
HincII	GTYRAC	4 cut(s)	139, 1159, 1690, 2235
HindII	GTYRAC	4 cut(s)	139, 1159, 1690, 2235
HindIII	AAGCTT	1 cut(s)	201
HpaI	GTTAAC	3 cut(s)	139, 1159, 2235
HpaII	CCGG	2 cut(s)	443, 1007
HphI	GGTGA	5 cut(s)	575, 1082, 1345, 1589, 1672
Hpy166II	GTNNAC	9 cut(s)	139, 631, 709, 732, 1159, 1206, 1690, 1911, 2235
Hpy8I	GTNNAC	9 cut(s)	139, 631, 709, 732, 1159, 1206, 1690, 1911, 2235
Hpy99I	CGWCG	3 cut(s)	124, 171, 265
HpyCH4III	ACNGT	8 cut(s)	740, 1021, 1165, 1374, 1441, 1591, 1880, 1908
HpyCH4IV	ACGT	2 cut(s)	404, 1279
HpyF10VI	GCNNNNNNNGC	4 cut(s)	475, 1235, 1384, 2168
HpyF3I	CTNAG	6 cut(s)	75, 432, 483, 509, 1122, 1413
HpySE526I	ACGT	2 cut(s)	404, 1279
Hsp92I	GRCGYC	2 cut(s)	119, 316
HspAI	GCGC	2 cut(s)	54, 1404
Ksp22I	TGATCA	1 cut(s)	1834
KspAI	GTTAAC	3 cut(s)	139, 1159, 2235
LguI	GCTCTTC	1 cut(s)	1083
LmnI	GCTCC	8 cut(s)	156, 214, 251, 673, 1222, 1384, 1524, 1700
Lsp1109I	GCAGC	5 cut(s)	1060, 1216, 2094, 2149, 2300
LweI	GCATC	4 cut(s)	535, 916, 1034, 2065
MabI	ACCWGGT	2 cut(s)	454, 966
MaeI	CTAG	4 cut(s)	804, 1401, 1467, 2115
MaeII	ACGT	2 cut(s)	404, 1279
MaeIII	GTNAC	3 cut(s)	178, 1955, 1987
MbiI	CCGCTC	1 cut(s)	1225
MboII	GAAGA	8 cut(s)	390, 644, 1070, 1524, 1838, 1843, 1907, 1985
MfeI	CAATTG	1 cut(s)	575
MflI	RGATCY	3 cut(s)	637, 1003, 2008
MhlI	GDGCHC	2 cut(s)	1603, 2221
MlsI	TGGCCA	1 cut(s)	2162
MluNI	TGGCCA	1 cut(s)	2162
MlyI	GAGTC	7 cut(s)	419, 501, 881, 1253, 1685, 1906, 2162
MmeI	TCCRAC	5 cut(s)	387, 864, 1515, 1764, 2049
Mox20I	TGGCCA	1 cut(s)	2162
MscI	TGGCCA	1 cut(s)	2162
MslI	CAYNNNNRTG	1 cut(s)	1173
Msp20I	TGGCCA	1 cut(s)	2162
MspCI	CTTAAG	1 cut(s)	2024
MspI	CCGG	2 cut(s)	443, 1007
MspR9I	CCNGG	5 cut(s)	212, 313, 456, 968, 1257
MunI	CAATTG	1 cut(s)	575
Mva1269I	GAATGC	1 cut(s)	754
MvaI	CCWGG	5 cut(s)	212, 313, 456, 968, 1257
MwoI	GCNNNNNNNGC	4 cut(s)	475, 1235, 1384, 2168
NcoI	CCATGG	2 cut(s)	49, 2157
NheI	GCTAGC	1 cut(s)	1400
NlaIV	GGNNCC	2 cut(s)	247, 1005
NmeAIII	GCCGAG	1 cut(s)	1408
PaeR7I	CTCGAG	1 cut(s)	2298
PagI	TCATGA	3 cut(s)	1150, 1168, 1603
PciSI	GCTCTTC	1 cut(s)	1083
PcsI	WCGNNNNNNNCGW	1 cut(s)	841
PctI	GAATGC	1 cut(s)	754
PfeI	GAWTC	6 cut(s)	298, 417, 493, 682, 859, 1274
PflFI	GACNNNGTC	1 cut(s)	510
PkrI	GCNGC	6 cut(s)	1075, 1231, 1462, 2084, 2139, 2290
PleI	GAGTC	7 cut(s)	418, 501, 881, 1252, 1685, 1906, 2161
PpsI	GAGTC	7 cut(s)	418, 501, 881, 1252, 1685, 1906, 2161
PshBI	ATTAAT	3 cut(s)	819, 936, 2130
Psp124BI	GAGCTC	1 cut(s)	2221
Psp6I	CCWGG	5 cut(s)	210, 311, 454, 966, 1255
PspFI	CCCAGC	1 cut(s)	897
PspGI	CCWGG	5 cut(s)	210, 311, 454, 966, 1255
PspN4I	GGNNCC	2 cut(s)	247, 1005
PspPI	GGNCC	4 cut(s)	785, 1203, 1265, 1880
PstNI	CAGNNNCTG	1 cut(s)	1906
PsuI	RGATCY	3 cut(s)	637, 1003, 2008
PsyI	GACNNNGTC	1 cut(s)	510
RsaI	GTAC	7 cut(s)	209, 324, 397, 710, 733, 985, 2254
RsaNI	GTAC	7 cut(s)	208, 323, 396, 709, 732, 984, 2253
RseI	CAYNNNNRTG	1 cut(s)	1173
SacI	GAGCTC	1 cut(s)	2221
SapI	GCTCTTC	1 cut(s)	1083
SatI	GCNGC	6 cut(s)	1074, 1230, 1461, 2083, 2138, 2289
Sau96I	GGNCC	4 cut(s)	785, 1203, 1265, 1880
SchI	GAGTC	7 cut(s)	419, 501, 881, 1253, 1685, 1906, 2162
ScrFI	CCNGG	5 cut(s)	212, 313, 456, 968, 1257
SduI	GDGCHC	2 cut(s)	1603, 2221
SexAI	ACCWGGT	2 cut(s)	454, 966
SfaNI	GCATC	4 cut(s)	535, 916, 1034, 2065
SfcI	CTRYAG	1 cut(s)	1134
Sfr274I	CTCGAG	1 cut(s)	2298
SinI	GGWCC	3 cut(s)	1203, 1265, 1880
SlaI	CTCGAG	1 cut(s)	2298
SmiMI	CAYNNNNRTG	1 cut(s)	1173
SmlI	CTYRAG	5 cut(s)	32, 2012, 2024, 2298, 2312
SmoI	CTYRAG	5 cut(s)	32, 2012, 2024, 2298, 2312
SsiI	CCGC	8 cut(s)	722, 981, 1225, 1393, 1461, 1894, 2080, 2209
SspI	AATATT	1 cut(s)	521
SspMI	CTAG	4 cut(s)	804, 1401, 1467, 2115
SstI	GAGCTC	1 cut(s)	2221
StyD4I	CCNGG	5 cut(s)	210, 311, 454, 966, 1255
StyI	CCWWGG	4 cut(s)	49, 1562, 1594, 2157
TaaI	ACNGT	8 cut(s)	740, 1021, 1165, 1374, 1441, 1591, 1880, 1908
TaiI	ACGT	2 cut(s)	407, 1282
TaqI	TCGA	5 cut(s)	169, 1549, 1763, 2215, 2299
TatI	WGTACW	2 cut(s)	731, 2252
TauI	GCSGC	1 cut(s)	1463
TfiI	GAWTC	6 cut(s)	298, 417, 493, 682, 859, 1274
TscAI	CASTG	5 cut(s)	440, 743, 1275, 1911, 2049
TseI	GCWGC	5 cut(s)	1073, 1229, 2082, 2137, 2288
TspDTI	ATGAA	9 cut(s)	213, 1005, 1070, 1071, 1127, 1157, 1620, 1907, 2048
TspGWI	ACGGA	3 cut(s)	278, 1837, 2252
TspRI	CASTG	5 cut(s)	440, 743, 1275, 1911, 2049
Tth111I	GACNNNGTC	1 cut(s)	510
Vha464I	CTTAAG	1 cut(s)	2024
VpaK11BI	GGWCC	3 cut(s)	1203, 1265, 1880
VspI	ATTAAT	3 cut(s)	819, 936, 2130
XapI	RAATTY	7 cut(s)	267, 777, 992, 1041, 1059, 1649, 1657
XbaI	TCTAGA	1 cut(s)	803
XcmI	CCANNNNNNNNNTGG	1 cut(s)	309
XhoI	CTCGAG	1 cut(s)	2298
XspI	CTAG	4 cut(s)	804, 1401, 1467, 2115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.