Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001085

Physical Location & Seq

Genomic Coordinates Forward (+)

10425446 .. 10430628

Gene Structure 5183 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0132100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

ATGTTCTCAAGATCTTGCGTAAGTTTGTTAGAGTTGGCGTCTGGGGACATGTTAAATTTCCCTCAGACTCCTAGAAACCTTCCAAGAGTAATGACTATTGAAGGAATAATTCCTGATGTCAAAAATAGTGATGGGAGTAATAATGAAGATACAAACGTTGTCCCCTCTGAATGCCGCGAGAAAAAAATCATAGTGGCAAATTTTCTTCCTTTACATGCTCAGAAGGATGCGAAATCTGGAAGATGGTGCTTCAGTTTTGATGAGGATCCAATCTTGCTGCAGCTGAAAGATGGTTTCTCATCTGATGATGTGGTTATGTATGTAGGGTCTCTGAAGGTTGACATAGATGCAAGTGAACAAGAAGAAGTTTCCCAGAAACTTCTGGAGGAATTTAATTGTGTGCCAACGTTCCTTCCTCCTGAGCTTCACAAGAAGTACTATCATGGGTTTTGTAAGCAATATTTGTGGCCACTTTTTCACTACATGCTTCCCATGTGCCTGGACCACAGCAATCGCTTTGACAGGCGACTGTGGCAGGCTTATGTTTCTGCTAACAAGATATATGCCGATAAAGTCATGGAGGTGATTAATCCTGAAAATGATTATGTTTGGGTTCATGACTATCACCTTATGATTCTTCCCACTTTTTTGAGAAGGCGTTTTTCGCGAGTGAAGCTTGGGTTTTTTCTACATAGTCCCTTCCCCTCATCAGAAATCTACAGGACTTTGCCTGTCAGAGATGAAATACTGAGAGCCCTGCTAAATGTAGATTTGATTGGTTTTCATACATTTGATTACGCTCGCCACTTTCTATCTTGCTGCAGTAGAATGCTTGGCCTTGATTATGAATCAAAGCGAGGTTACATTGGACTTGAATATTTTGGCCGCACAGTGTACGTTAAGATTCTGCCAGTAGGGATACACATGGGTCGACTTCAATCTGCTTTAAATCACCCCTCTTCTTCCATGAAGGCCAAAGAGATTCAAGAACAGTTTAAGGGGAAGAAGCTTATTGTTGGCGTGGATGACATGGACATATTCAAAGGGATCAGCCTAAAGTTATTGGCCATGGAACAACTTCTGCAGCAGCACCCAGAGTTGCGGGGCAAGGTAGTCCTGGTTCAAATTGTAAACCCTGCAAGGAGCACAGGGAAAGATGTTCAGGAAGCAAAAAAGGAAACATATTCGACGACCAGGAGGATAAATGAAGTTTTCGGCTTTCCAGGCTATGAACCAGTTGTTTTGATTGATCGCAACGTTCCTTTCCATGAGAAGACTGCCTATTACTCATTGGCTGAATGCTGCATTGTCAATGCTGTAAGGGATGGCATGAACCTAATCCCTTACAAGTATATTATTTGCAGGCAGGGGACCCCAAATATGGATAAAGCTTTAGGAATTCCCTTGGATTCCCCTCATACAAGTACACTTGTTATTTCAGAGTTCATAGGTTGCTCACCATCTTTGAGTGGAGCAATAAGGGTGAACCCCTGGAACATTGAAGCTGTGGCTGATGCACTAAATGTGGCGATCACAATGCCTGATTTAGAAAAGCAGCTGCGGCATGAAAAACATTACAGGTATGTGAGCTCTCATGATGTGGCTTATTGGGCGCGCAGTTTTGTACAGGACTTGGAGCGAGCTTGCAAGGATCACTACAGAAAACGGTGTTGGGGAATTGGTTTTGGTCTGCAGTTTAGAATCTTGTCTCTTTCTCCAAGTTTTAGGAAGCTTTCCATTGACCATATCCTCTCTGCATATAAAAGGACAAGTCGAAGGGCAATCTTCTTGGATTATGATGGAACAATAATGCCTGAATCTTCCATTGTTAAGACGCCAAGTCCTGAAGTCATTTCTGTTCTGAACAACCTTTGCAGTGACCCCAAGAACACTGTGTTTATAGTTAGTGGTAGGGGTCAAGACTCTCTTAGCGAATGGTTTTCTCAGTGTGAGAATCTTGGCATAGCAGCGGAGCATGGATACTTCATAAGATGGAGTAGGAAGTCCAATTGGGAAACGAGTTCCTTAGCAATAGATTTGGACTGGAAGAGAATTGCAGAACCTGTGATGAGTTTATACACACAGGCAACCGATGGCTCCTACATAGAGAGCAAGGAGAGTGCCTTGGTATGGCACCATCTAGATGCTGATCCTGATTTTGGGTCCTGCCAGGCCAAGGAGATGTTGGATCATCTTGAAAATGTCCTTGCGAACGAGCCTGTAGTTGTTAAAAGGGGACAACATATTGTCGAAGTAAAGCCACAGGGAGTTACTAAAGGCTTGGTTGCAGAGAAAGTTCTCTCCATGATGATTGGTACAGGGAAAGCACCGGATTTTGTTTTGTGCATTGGGGATGATAGATCAGATGAGGACATGTTTGAAAGCATATCGAGCACAGCCTATAGTTCATGTGAAAATGTACCTCCTGAGATCTTTGCATGCACTGTTGGCCAAAAACCGAGTAAAGCTAGGTACTACCTAGACGATACAGCTGATGTCATGACATTGCTTCAGGGCCTCACTACTGATTCAAGTCTCAAGTCAAGGTGTAATGCAGAAATCGATCAAGTCTCTTTCGAGCATATTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000814 GO:0003674 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0019538 GO:0019941 GO:0030163 GO:0031090 GO:0031410 GO:0031982 GO:0032509 GO:0032511 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0036452 GO:0042802 GO:0042803 GO:0042886 GO:0043162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043328 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045324 GO:0046907 GO:0046983 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

ESCRT-II

Protein Analysis

863

Amino Acids

98.19

Weight (kDa)

6.14

Isoelectric Point (pI)

51.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	61 - 546	2.8e-189	Glycosyltransferase family 20
Trehalose_PPase	PF02358	596 - 830	3.6e-87	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001085)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20210
fragaria_vesca	FvH4_4g20610 FvH4_5g23280 FvH4_6g36630 FvH4_6g36640
malus_domestica	MD04G1024300.v1.1 MD04G1024500.v1.1 MD04G1024700.v1.1 MD04G1024900.v1.1 MD04G1025000.v1.1 MD04G1025200.v1.1 MD09G1167100.v1.1 MD14G1092500.v1.1 MD17G1264800.v1.1
prunus_persica	Prupe.3G024900_v2.0.a1 Prupe.3G025000_v2.0.a1 Prupe.3G242200_v2.0.a1 Prupe.7G024000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0149101 RchiOBHm_Chr7g0212221 RchiOBHm_Chr7g0221051
rosa_laevigata	RLG00000002181 RLG00000002913 RLG00000002914 RLG00000020368 RLG00000020369
rosa_multiflora	Rmu_sc0002283.1_g000057 Rmu_sc0002345.1_g000004 Rmu_sc0008839.1_g000015
rosa_roxburghii	Rroxscaffold_2G00098460 Rroxscaffold_2G00098470 Rroxscaffold_3G00238790 Rroxscaffold_3G00247020
rosa_rugosa	Rorug02G0409100 Rorug02G0409100 Rorug07G0132100 Rorug07G0132100 Rorug07G0200200
rosa_samantha	Rh2AG468800 Rh2AG468900 Rh2BG481400 Rh2CG454900 Rh2CG455000 Rh2DG490200 Rh2DG490300 Rh7AG265000 Rh7AG339500 Rh7BG259400 Rh7BG259500 Rh7BG330500 Rh7CG281700 Rh7CG357500 Rh7DG271600 Rh7DG338200
rosa_wichuraiana	Rw2G038170 Rw7G022620 Rw7G022640 Rw7G022680 Rw7G028880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2133
AccI	GTMKAC	1 cut(s)	931
AccII	CGCG	3 cut(s)	177, 667, 1615
AciI	CCGC	5 cut(s)	175, 886, 1102, 1561, 1970
AclI	AACGTT	3 cut(s)	156, 407, 1257
AclWI	GGATC	6 cut(s)	260, 273, 1055, 1659, 2144, 2196
AcoI	YGGCCR	4 cut(s)	467, 883, 1065, 2449
AcsI	RAATTY	4 cut(s)	55, 199, 389, 1398
AcuI	CTGAAG	4 cut(s)	235, 353, 1866, 2495
AcyI	GRCGYC	2 cut(s)	38, 1835
AfaI	GTAC	7 cut(s)	437, 896, 1426, 1626, 2317, 2421, 2474
AfiI	CCNNNNNNNGG	4 cut(s)	1381, 2130, 2159, 2176
AflIII	ACRYGT	2 cut(s)	48, 2373
AhdI	GACNNNNNGTC	1 cut(s)	1839
AjnI	CCWGG	6 cut(s)	498, 1116, 1193, 1222, 1490, 2169
AjuI	GAANNNNNNNTTGG	2 cut(s)	1654, 1686
Alw21I	GWGCWC	3 cut(s)	1148, 1592, 2396
Alw26I	GTCTC	4 cut(s)	333, 1713, 2540, 2575
AlwI	GGATC	6 cut(s)	260, 273, 1055, 1659, 2144, 2196
AlwNI	CAGNNNCTG	1 cut(s)	2063
AoxI	GGCC	8 cut(s)	467, 835, 883, 972, 1065, 2172, 2449, 2515
ApeKI	GCWGC	9 cut(s)	277, 280, 819, 1084, 1087, 1302, 1555, 1558, 1967
ApoI	RAATTY	4 cut(s)	55, 199, 389, 1398
AseI	ATTAAT	1 cut(s)	588
Asp700I	GAANNNNTTC	1 cut(s)	1077
AspLEI	GCGC	2 cut(s)	1615, 1617
AspS9I	GGNCC	4 cut(s)	502, 1371, 2163, 2515
AsuHPI	GGTGA	5 cut(s)	595, 617, 944, 1449, 1495
AvaII	GGWCC	3 cut(s)	502, 1371, 2163
BaeI	ACNNNNGTAYC	2 cut(s)	141, 174
BalI	TGGCCA	3 cut(s)	469, 1067, 2451
BamHI	GGATCC	1 cut(s)	265
BanI	GGYRCC	1 cut(s)	2133
BanII	GRGCYC	2 cut(s)	757, 1592
BbsI	GAAGAC	1 cut(s)	1280
Bbv12I	GWGCWC	3 cut(s)	1148, 1592, 2396
BbvI	GCAGC	9 cut(s)	264, 292, 806, 1096, 1099, 1289, 1545, 1567, 1979
BccI	CCATC	9 cut(s)	125, 237, 284, 1319, 1468, 1793, 1986, 2087, 2145
BcgI	CGANNNNNNTGC	2 cut(s)	1519, 1553
BciT130I	CCWGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
BciVI	GTATCC	2 cut(s)	912, 1973
BcoDI	GTCTC	4 cut(s)	333, 1713, 2540, 2575
BfaI	CTAG	4 cut(s)	72, 2141, 2469, 2480
BfmI	CTRYAG	8 cut(s)	278, 718, 820, 1082, 1657, 1691, 2220, 2401
BfuI	GTATCC	2 cut(s)	912, 1973
BglII	AGATCT	2 cut(s)	11, 2430
BmcAI	AGTACT	1 cut(s)	437
Bme1390I	CCNGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
Bme18I	GGWCC	3 cut(s)	502, 1371, 2163
BmeRI	GACNNNNNGTC	1 cut(s)	1839
BmgT120I	GGNCC	4 cut(s)	502, 1371, 2163, 2515
BmiI	GGNNCC	6 cut(s)	267, 1372, 1373, 2098, 2135, 2164
BmrFI	CCNGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
BmsI	GCATC	4 cut(s)	217, 337, 1504, 2134
BpiI	GAAGAC	1 cut(s)	1280
BpmI	CTGGAG	1 cut(s)	404
Bpu10I	CCTNAGC	2 cut(s)	420, 2026
BpuEI	CTTGAG	1 cut(s)	2522
Bsa29I	ATCGAT	1 cut(s)	2562
BsaBI	GATNNNNATC	2 cut(s)	264, 2148
BsaHI	GRCGYC	2 cut(s)	38, 1835
BsaI	GGTCTC	1 cut(s)	333
BsaJI	CCNNGG	5 cut(s)	1068, 1404, 1490, 2124, 2175
BsaWI	WCCGGW	1 cut(s)	2329
Bsc4I	CCNNNNNNNGG	4 cut(s)	1381, 2130, 2159, 2176
Bse1I	ACTGG	3 cut(s)	911, 1235, 2048
Bse3DI	GCAATG	1 cut(s)	2504
Bse8I	GATNNNNATC	2 cut(s)	264, 2148
BseBI	CCWGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
BseCI	ATCGAT	1 cut(s)	2562
BseDI	CCNNGG	5 cut(s)	1068, 1404, 1490, 2124, 2175
BseGI	GGATG	4 cut(s)	232, 1030, 1330, 2359
BseJI	GATNNNNATC	2 cut(s)	264, 2148
BseLI	CCNNNNNNNGG	4 cut(s)	1381, 2130, 2159, 2176
BseMI	GCAATG	1 cut(s)	2504
BseMII	CTCAG	6 cut(s)	77, 233, 411, 740, 1958, 2418
BseNI	ACTGG	3 cut(s)	911, 1235, 2048
BsePI	GCGCGC	1 cut(s)	1613
BseXI	GCAGC	9 cut(s)	264, 292, 806, 1096, 1099, 1289, 1545, 1567, 1979
Bsh1236I	CGCG	3 cut(s)	177, 667, 1615
BshFI	GGCC	8 cut(s)	469, 837, 885, 974, 1067, 2174, 2451, 2517
BshNI	GGYRCC	1 cut(s)	2133
BshVI	ATCGAT	1 cut(s)	2562
BsiHKAI	GWGCWC	3 cut(s)	1148, 1592, 2396
BsiSI	CCGG	1 cut(s)	2330
BslFI	GGGAC	5 cut(s)	59, 146, 681, 1384, 2250
BslI	CCNNNNNNNGG	4 cut(s)	1381, 2130, 2159, 2176
BsmAI	GTCTC	4 cut(s)	333, 1713, 2540, 2575
BsmFI	GGGAC	5 cut(s)	59, 146, 681, 1384, 2250
BsmI	GAATGC	3 cut(s)	176, 834, 1304
BsnI	GGCC	8 cut(s)	469, 837, 885, 974, 1067, 2174, 2451, 2517
Bso31I	GGTCTC	1 cut(s)	333
Bsp1286I	GDGCHC	4 cut(s)	757, 1148, 1592, 2396
Bsp1407I	TGTACA	1 cut(s)	1624
Bsp19I	CCATGG	1 cut(s)	1068
Bsp68I	TCGCGA	1 cut(s)	667
BspACI	CCGC	5 cut(s)	175, 886, 1102, 1561, 1970
BspANI	GGCC	8 cut(s)	469, 837, 885, 974, 1067, 2174, 2451, 2517
BspCNI	CTCAG	6 cut(s)	76, 232, 412, 741, 1957, 2419
BspDI	ATCGAT	1 cut(s)	2562
BspFNI	CGCG	3 cut(s)	177, 667, 1615
BspHI	TCATGA	3 cut(s)	616, 1594, 2499
BspLI	GGNNCC	6 cut(s)	267, 1372, 1373, 2098, 2135, 2164
BspMAI	CTGCAG	4 cut(s)	282, 824, 1086, 1695
BspPI	GGATC	6 cut(s)	260, 273, 1055, 1659, 2144, 2196
BspT107I	GGYRCC	1 cut(s)	2133
BspTNI	GGTCTC	1 cut(s)	333
BsrDI	GCAATG	1 cut(s)	2504
BsrGI	TGTACA	1 cut(s)	1624
BsrI	ACTGG	3 cut(s)	911, 1235, 2048
BssECI	CCNNGG	5 cut(s)	1068, 1404, 1490, 2124, 2175
BssHII	GCGCGC	1 cut(s)	1613
BssNI	GRCGYC	2 cut(s)	38, 1835
BssT1I	CCWWGG	4 cut(s)	1068, 1404, 2124, 2175
Bst2UI	CCWGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
Bst4CI	ACNGT	6 cut(s)	531, 892, 993, 1668, 1894, 2446
Bst6I	CTCTTC	2 cut(s)	964, 2042
BstACI	GRCGYC	2 cut(s)	38, 1835
BstAUI	TGTACA	1 cut(s)	1624
BstC8I	GCNNGC	7 cut(s)	537, 802, 1364, 1615, 1641, 1645, 2440
BstDEI	CTNAG	8 cut(s)	63, 219, 420, 749, 1928, 1944, 2026, 2427
BstDSI	CCRYGG	1 cut(s)	1068
BstF5I	GGATG	4 cut(s)	232, 1030, 1330, 2359
BstFNI	CGCG	3 cut(s)	177, 667, 1615
BstHHI	GCGC	2 cut(s)	1615, 1617
BstMAI	GTCTC	4 cut(s)	333, 1713, 2540, 2575
BstMWI	GCNNNNNNNGC	8 cut(s)	532, 664, 673, 1224, 1561, 1610, 2391, 2448
BstNI	CCWGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
BstNSI	RCATGY	5 cut(s)	52, 218, 487, 2377, 2442
BstSCI	CCNGG	6 cut(s)	498, 1116, 1193, 1222, 1490, 2169
BstSFI	CTRYAG	8 cut(s)	278, 718, 820, 1082, 1657, 1691, 2220, 2401
BstUI	CGCG	3 cut(s)	177, 667, 1615
BstV1I	GCAGC	9 cut(s)	264, 292, 806, 1096, 1099, 1289, 1545, 1567, 1979
BstV2I	GAAGAC	1 cut(s)	1280
BstX2I	RGATCY	3 cut(s)	11, 265, 2430
BstXI	CCANNNNNNTGG	1 cut(s)	499
BstYI	RGATCY	3 cut(s)	11, 265, 2430
Bsu15I	ATCGAT	1 cut(s)	2562
BsuI	GTATCC	2 cut(s)	912, 1973
BsuRI	GGCC	8 cut(s)	469, 837, 885, 974, 1067, 2174, 2451, 2517
BsuTUI	ATCGAT	1 cut(s)	2562
BtgI	CCRYGG	1 cut(s)	1068
BtsCI	GGATG	4 cut(s)	232, 1030, 1330, 2359
BtsI	GCAGTG	1 cut(s)	1882
BtsIMutI	CAGTG	5 cut(s)	897, 1882, 1890, 1952, 2442
BtuMI	TCGCGA	1 cut(s)	667
Cac8I	GCNNGC	7 cut(s)	537, 802, 1364, 1615, 1641, 1645, 2440
CaiI	CAGNNNCTG	1 cut(s)	2063
CciI	TCATGA	3 cut(s)	616, 1594, 2499
CfoI	GCGC	2 cut(s)	1615, 1617
Cfr13I	GGNCC	4 cut(s)	502, 1371, 2163, 2515
ClaI	ATCGAT	1 cut(s)	2562
CseI	GACGC	2 cut(s)	27, 1843
Csp6I	GTAC	7 cut(s)	436, 895, 1425, 1625, 2316, 2420, 2473
CspCI	CAANNNNNGTGG	2 cut(s)	446, 481
CviQI	GTAC	7 cut(s)	436, 895, 1425, 1625, 2316, 2420, 2473
DdeI	CTNAG	8 cut(s)	63, 219, 420, 749, 1928, 1944, 2026, 2427
DraI	TTTAAA	1 cut(s)	948
DriI	GACNNNNNGTC	1 cut(s)	1839
EaeI	YGGCCR	4 cut(s)	467, 883, 1065, 2449
Eam1104I	CTCTTC	2 cut(s)	964, 2042
Eam1105I	GACNNNNNGTC	1 cut(s)	1839
EarI	CTCTTC	2 cut(s)	964, 2042
Ecl136II	GAGCTC	1 cut(s)	1590
Eco130I	CCWWGG	4 cut(s)	1068, 1404, 2124, 2175
Eco24I	GRGCYC	2 cut(s)	757, 1592
Eco31I	GGTCTC	1 cut(s)	333
Eco47I	GGWCC	3 cut(s)	502, 1371, 2163
Eco53kI	GAGCTC	1 cut(s)	1590
Eco57I	CTGAAG	4 cut(s)	235, 353, 1866, 2495
EcoICRI	GAGCTC	1 cut(s)	1590
EcoO109I	RGGNCCY	3 cut(s)	1371, 2163, 2515
EcoRI	GAATTC	1 cut(s)	1398
EcoRII	CCWGG	6 cut(s)	498, 1116, 1193, 1222, 1490, 2169
EcoT14I	CCWWGG	4 cut(s)	1068, 1404, 2124, 2175
EcoT38I	GRGCYC	2 cut(s)	757, 1592
ErhI	CCWWGG	4 cut(s)	1068, 1404, 2124, 2175
FalI	AAGNNNNNCTT	2 cut(s)	1911, 1943
FaqI	GGGAC	5 cut(s)	59, 146, 681, 1384, 2250
FauI	CCCGC	1 cut(s)	1095
FblI	GTMKAC	1 cut(s)	931
FokI	GGATG	4 cut(s)	239, 1037, 1337, 2366
FriOI	GRGCYC	2 cut(s)	757, 1592
FspBI	CTAG	4 cut(s)	72, 2141, 2469, 2480
GlaI	GCGC	2 cut(s)	1614, 1616
GsuI	CTGGAG	1 cut(s)	404
HaeIII	GGCC	8 cut(s)	469, 837, 885, 974, 1067, 2174, 2451, 2517
HapII	CCGG	1 cut(s)	2330
HgaI	GACGC	2 cut(s)	27, 1843
HhaI	GCGC	2 cut(s)	1615, 1617
Hin1I	GRCGYC	2 cut(s)	38, 1835
Hin6I	GCGC	2 cut(s)	1613, 1615
HinP1I	GCGC	2 cut(s)	1613, 1615
HincII	GTYRAC	2 cut(s)	340, 932
HindII	GTYRAC	2 cut(s)	340, 932
HindIII	AAGCTT	4 cut(s)	674, 1007, 1389, 1730
HpaII	CCGG	1 cut(s)	2330
HphI	GGTGA	5 cut(s)	595, 617, 944, 1449, 1495
Hpy166II	GTNNAC	7 cut(s)	340, 356, 895, 932, 1132, 1427, 1486
Hpy8I	GTNNAC	7 cut(s)	340, 356, 895, 932, 1132, 1427, 1486
Hpy99I	CGWCG	1 cut(s)	1192
HpyAV	CCTTC	9 cut(s)	89, 95, 217, 328, 422, 648, 709, 964, 1770
HpyCH4III	ACNGT	6 cut(s)	531, 892, 993, 1668, 1894, 2446
HpyCH4IV	ACGT	4 cut(s)	156, 407, 897, 1257
HpyF10VI	GCNNNNNNNGC	8 cut(s)	532, 664, 673, 1224, 1561, 1610, 2391, 2448
HpyF3I	CTNAG	8 cut(s)	63, 219, 420, 749, 1928, 1944, 2026, 2427
HpySE526I	ACGT	4 cut(s)	156, 407, 897, 1257
Hsp92I	GRCGYC	2 cut(s)	38, 1835
HspAI	GCGC	2 cut(s)	1613, 1615
KflI	GGGWCCC	1 cut(s)	1371
LmnI	GCTCC	5 cut(s)	1143, 1472, 1636, 1972, 2102
Lsp1109I	GCAGC	9 cut(s)	264, 292, 806, 1096, 1099, 1289, 1545, 1567, 1979
LweI	GCATC	4 cut(s)	217, 337, 1504, 2134
MaeI	CTAG	4 cut(s)	72, 2141, 2469, 2480
MaeII	ACGT	4 cut(s)	156, 407, 897, 1257
MaeIII	GTNAC	3 cut(s)	860, 1877, 2269
MfeI	CAATTG	1 cut(s)	2008
MflI	RGATCY	3 cut(s)	11, 265, 2430
MhlI	GDGCHC	4 cut(s)	757, 1148, 1592, 2396
MlsI	TGGCCA	3 cut(s)	469, 1067, 2451
MluNI	TGGCCA	3 cut(s)	469, 1067, 2451
MlyI	GAGTC	2 cut(s)	61, 1916
MmeI	TCCRAC	1 cut(s)	2166
Mox20I	TGGCCA	3 cut(s)	469, 1067, 2451
MroXI	GAANNNNTTC	1 cut(s)	1077
MscI	TGGCCA	3 cut(s)	469, 1067, 2451
MseI	TTAA	8 cut(s)	53, 393, 588, 900, 947, 996, 1830, 2229
MslI	CAYNNNNRTG	2 cut(s)	581, 2142
Msp20I	TGGCCA	3 cut(s)	469, 1067, 2451
MspA1I	CMGCKG	4 cut(s)	283, 1558, 1970, 2492
MspI	CCGG	1 cut(s)	2330
MspR9I	CCNGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
MunI	CAATTG	1 cut(s)	2008
Mva1269I	GAATGC	3 cut(s)	176, 834, 1304
MvaI	CCWGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
MvnI	CGCG	3 cut(s)	177, 667, 1615
MwoI	GCNNNNNNNGC	8 cut(s)	532, 664, 673, 1224, 1561, 1610, 2391, 2448
NcoI	CCATGG	1 cut(s)	1068
NlaIV	GGNNCC	6 cut(s)	267, 1372, 1373, 2098, 2135, 2164
NmuCI	GTSAC	1 cut(s)	1877
NruI	TCGCGA	1 cut(s)	667
NspI	RCATGY	5 cut(s)	52, 218, 487, 2377, 2442
PaeI	GCATGC	1 cut(s)	2442
PagI	TCATGA	3 cut(s)	616, 1594, 2499
PauI	GCGCGC	1 cut(s)	1613
PciI	ACATGT	2 cut(s)	48, 2373
PctI	GAATGC	3 cut(s)	176, 834, 1304
PdmI	GAANNNNTTC	1 cut(s)	1077
PfeI	GAWTC	9 cut(s)	634, 848, 904, 982, 1409, 1701, 1817, 1954, 2528
PleI	GAGTC	2 cut(s)	61, 1916
PpsI	GAGTC	2 cut(s)	61, 1916
PpuMI	RGGWCCY	2 cut(s)	1371, 2163
PscI	ACATGT	2 cut(s)	48, 2373
PshBI	ATTAAT	1 cut(s)	588
Psp124BI	GAGCTC	1 cut(s)	1592
Psp1406I	AACGTT	3 cut(s)	156, 407, 1257
Psp5II	RGGWCCY	2 cut(s)	1371, 2163
Psp6I	CCWGG	6 cut(s)	498, 1116, 1193, 1222, 1490, 2169
PspGI	CCWGG	6 cut(s)	498, 1116, 1193, 1222, 1490, 2169
PspN4I	GGNNCC	6 cut(s)	267, 1372, 1373, 2098, 2135, 2164
PspPI	GGNCC	4 cut(s)	502, 1371, 2163, 2515
PspPPI	RGGWCCY	2 cut(s)	1371, 2163
PsrI	GAACNNNNNNTAC	2 cut(s)	1104, 1136
PstI	CTGCAG	4 cut(s)	282, 824, 1086, 1695
PstNI	CAGNNNCTG	1 cut(s)	2063
PsuI	RGATCY	3 cut(s)	11, 265, 2430
PteI	GCGCGC	1 cut(s)	1613
PvuII	CAGCTG	3 cut(s)	283, 1558, 2492
RruI	TCGCGA	1 cut(s)	667
RsaI	GTAC	7 cut(s)	437, 896, 1426, 1626, 2317, 2421, 2474
RsaNI	GTAC	7 cut(s)	436, 895, 1425, 1625, 2316, 2420, 2473
RseI	CAYNNNNRTG	2 cut(s)	581, 2142
SacI	GAGCTC	1 cut(s)	1592
SalI	GTCGAC	1 cut(s)	930
SaqAI	TTAA	8 cut(s)	53, 393, 588, 900, 947, 996, 1830, 2229
Sau96I	GGNCC	4 cut(s)	502, 1371, 2163, 2515
ScaI	AGTACT	1 cut(s)	437
SchI	GAGTC	2 cut(s)	61, 1916
ScrFI	CCNGG	6 cut(s)	500, 1118, 1195, 1224, 1492, 2171
SduI	GDGCHC	4 cut(s)	757, 1148, 1592, 2396
SfaNI	GCATC	4 cut(s)	217, 337, 1504, 2134
SfcI	CTRYAG	8 cut(s)	278, 718, 820, 1082, 1657, 1691, 2220, 2401
SinI	GGWCC	3 cut(s)	502, 1371, 2163
SmiMI	CAYNNNNRTG	2 cut(s)	581, 2142
SmlI	CTYRAG	2 cut(s)	7, 2537
SmoI	CTYRAG	2 cut(s)	7, 2537
SphI	GCATGC	1 cut(s)	2442
SsiI	CCGC	5 cut(s)	175, 886, 1102, 1561, 1970
SspI	AATATT	2 cut(s)	461, 878
SspMI	CTAG	4 cut(s)	72, 2141, 2469, 2480
SstI	GAGCTC	1 cut(s)	1592
StyD4I	CCNGG	6 cut(s)	498, 1116, 1193, 1222, 1490, 2169
StyI	CCWWGG	4 cut(s)	1068, 1404, 2124, 2175
TaaI	ACNGT	6 cut(s)	531, 892, 993, 1668, 1894, 2446
TaiI	ACGT	4 cut(s)	159, 410, 900, 1260
TaqI	TCGA	7 cut(s)	931, 1187, 1774, 2250, 2390, 2562, 2577
TatI	WGTACW	3 cut(s)	435, 1424, 1624
TauI	GCSGC	3 cut(s)	177, 888, 1564
TfiI	GAWTC	9 cut(s)	634, 848, 904, 982, 1409, 1701, 1817, 1954, 2528
Tru1I	TTAA	8 cut(s)	53, 393, 588, 900, 947, 996, 1830, 2229
Tru9I	TTAA	8 cut(s)	53, 393, 588, 900, 947, 996, 1830, 2229
TscAI	CASTG	5 cut(s)	897, 1882, 1897, 1952, 2449
TseFI	GTSAC	1 cut(s)	1877
TseI	GCWGC	9 cut(s)	277, 280, 819, 1084, 1087, 1302, 1555, 1558, 1967
Tsp45I	GTSAC	1 cut(s)	1877
TspRI	CASTG	5 cut(s)	897, 1882, 1897, 1952, 2449
VpaK11BI	GGWCC	3 cut(s)	502, 1371, 2163
VspI	ATTAAT	1 cut(s)	588
XapI	RAATTY	4 cut(s)	55, 199, 389, 1398
XbaI	TCTAGA	1 cut(s)	2140
XceI	RCATGY	5 cut(s)	52, 218, 487, 2377, 2442
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2182
XmiI	GTMKAC	1 cut(s)	931
XmnI	GAANNNNTTC	1 cut(s)	1077
XspI	CTAG	4 cut(s)	72, 2141, 2469, 2480
ZrmI	AGTACT	1 cut(s)	437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.