Rh7BG259500

Vacuolar-processing enzyme-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001085
Physical Location & Seq
Forward (+)
23627159 .. 23635702
8544 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG259500.1

Sequence Viewer

Length: 2031 bp
ATGAGAGGGCAGTACTATTCCAGTGGAGTATTTTTGGTATTGCTTACCATCTTTGGTGTGAGCAGTGCTCAACTTCCCAAGTTGATGCCACAAGAATTTCCGGAGGATTTCATTATTCATGTTGATAGGGGCTCTAGCAACAGTGACACAAATGGAACAAGATGGGCAGTTCTAGTTGCTGGGTCTATGGGTTATGGAAACTATAGGCATCAGGCTGATGTGTGTCATGCATATCAAATTTTGAAGAAAGGTGGACTGAAAGATGAAAACATCATTGTTTTCATGTACGATGACATTGCAAACAACCCTGAGAATCCAAGGCCTGGTGTCATCATCAACAAGCCCGACGGCGAGGATGTTTACCATGGAGTTCCCAAGGATTACGCAGGAGAGAATGCTACTGCTGCTAATCTTTATGCTGTCATTCTTGGAGATAAATCTAATCTCTCTGGGGGTAGTGGCAAGGTTCTGAACAGCGGGCCAAACGACAATGTCTTTATCTATTACACCGACCATGGCGGGCCTGGGCTCATCGGTATGCCTGAGGGCGATTATGTCTATGCCAATGATCTGGTAGATGTTCTGATAAAGAAGCATGAAGCTAATGCATACAAAAACATGGTATTTTACCTTGAAGCTTGTGAATCTGGGAGTATGTTCGAGGGTCTACTGCCGACAAATATAAGCATCTATGCAACCACAGCATCAAATGCAACTGAGAGTAGTTGGGGAACGTACTGCCCTGATATGACTCCTCCTCCACCTCCTGAATATGACACTTGCTTGGGTGATTTGTATAGTGTTTCTTGGATGGAGGATTGTGACTTACAAGATTTGCGCCAAGAGTCTCTGGAAGAGCAATATCAAACGGTTAAATCGAGAACAGTAAATAATAATACTTATGGTTCTCATGTTATGCAATATGGAAATATGTATCAAACCTCAGATTTAGTATCCTTTTACTTGGGTGCAAATGATAACTCTTCCTCCATTGAAAGCAAATCGCCACAGTCAATCTTAGAAGTTGTTGACAATCGCGATGCAGATCTTCTTCATCTTTGGCACAAGTTCCAACGCGCACCCGCTGGCTCTGAAATGAAGCAGGAAGCTAAAAGGGTCCTAGATGATGAAATTTCAAGTAGGCAGCGCATTGACCACAACATAAACCAAATCGAACAACTTGTGTTGGGATATTCAAGTAACTTTGTTCGTCCTGGGGGGCAAGCTCTTGTTGATGATTGGGACTGCTTTAAGACAGTTGTGAAAACTTATGAGAAACATTGTGGGTCATTGTCAAATTATGTAACAACCACCGCCAGCGTCTCAAACTCAAAGCAGGGTCATGTTCATGTTCCTCAGTTACAAGATGGGATATTTTCAAGATCGGTTCAGAAGGAGTGGACCACACAAGGTGATATGAGAAAAACTGTCAACTTAAGTGGATCTTCATCTGATTCCGGGCCTTATGAAAGCACATCAAACACTAGATTAAAAGAGAGAAGATCTGATAAGCATGTCAATGCCAACCAAGATTCACCAATAAGCCATTCGAAGGCAGAGAGACAACGCCGGGATAAGCTTAATCATCTATTTTATGCCCTTAGGTCCGTTGTTCCTAATGTCTCAAAGATGGATAAAGCTTCGACACTATCTGATGCAATTGTATACATCAATAAATTGAAGACAACGATCGAGGAGTTGGAGGCCAAAATCCAAGCAAAACCCAAGAAACCCAAAGTAAGCATCATGATTGACAATATTCTTGATAGCCAAAGCACCAGAACTGCTATGGAGGTGGGTGTGGATGTGAAGATTGTAGGGTCGGAAGCCATAATCCGAGTTTGGTGTCCGAATCATCAGGATGATCCATGTGCTAGATTGATGAATGCACTCAGAGACCTTGAATTACAAATTCATCGTGCAAGCATATCTAGTGTGAATGAGTTGATACTTCAAGATGTTATGGTAAGAGTTCCTGATGGATTCGCAAGCGAGGAGGTCATCAAAACCGCAATTATTAATAGATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04142 ko04612 map04142 map04612
Pfam Domains
Protein Families
Peptidase_C13

Protein Analysis

676

Amino Acids

75.27

Weight (kDa)

5.4

Isoelectric Point (pI)

47.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C13 PF01650 54 - 323 7.4e-116 Peptidase C13 family
Legum_prodom PF20985 374 - 436 4.3e-17 Legumain, prodomain
HLH PF00010 515 - 561 1.8e-12 Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant PF22754 601 - 672 1.4e-08 Plant bHLH transcription factor, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 323
AccI GTMKAC 2 cut(s) 667, 1665
AccII CGCG 2 cut(s) 1038, 1077
AccIII TCCGGA 1 cut(s) 100
AciI CCGC 5 cut(s) 477, 519, 1083, 1314, 2010
AclWI GGATC 2 cut(s) 1450, 1859
AcsI RAATTY 4 cut(s) 95, 237, 1131, 1911
AdeI CACNNNGTG 1 cut(s) 1412
AfaI GTAC 3 cut(s) 14, 287, 737
AfiI CCNNNNNNNGG 2 cut(s) 323, 1552
AflII CTTAAG 1 cut(s) 1435
AgsI TTSAA 9 cut(s) 244, 635, 995, 1137, 1197, 1380, 1681, 1904, 1955
AjnI CCWGG 3 cut(s) 322, 523, 1213
AjuI GAANNNNNNNTTGG 2 cut(s) 1531, 1563
AluBI AGCT 6 cut(s) 602, 638, 1109, 1226, 1579, 1640
AluI AGCT 6 cut(s) 602, 638, 1109, 1226, 1579, 1640
Alw21I GWGCWC 1 cut(s) 70
Alw26I GTCTC 5 cut(s) 852, 1327, 1555, 1627, 1890
AlwI GGATC 2 cut(s) 1450, 1859
Aor13HI TCCGGA 1 cut(s) 100
AoxI GGCC 5 cut(s) 320, 479, 521, 1460, 1704
ApeKI GCWGC 2 cut(s) 404, 1144
ApoI RAATTY 4 cut(s) 95, 237, 1131, 1911
AseI ATTAAT 1 cut(s) 2019
AspLEI GCGC 3 cut(s) 840, 1079, 1149
AspS9I GGNCC 6 cut(s) 479, 521, 1117, 1401, 1460, 1605
AsuC2I CCSGG 2 cut(s) 1459, 1571
AsuHPI GGTGA 3 cut(s) 800, 1424, 1527
AsuII TTCGAA 1 cut(s) 1550
AvaII GGWCC 3 cut(s) 1117, 1401, 1605
AxyI CCTNAGG 2 cut(s) 543, 1601
BanII GRGCYC 2 cut(s) 134, 531
BbsI GAAGAC 1 cut(s) 1688
Bbv12I GWGCWC 1 cut(s) 70
BbvI GCAGC 2 cut(s) 391, 1156
BccI CCATC 6 cut(s) 56, 156, 805, 1361, 1624, 1973
BceAI ACGGC 1 cut(s) 364
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BciT130I CCWGG 3 cut(s) 324, 525, 1215
BciVI GTATCC 1 cut(s) 964
BcnI CCSGG 2 cut(s) 1459, 1571
BcoDI GTCTC 5 cut(s) 852, 1327, 1555, 1627, 1890
BfaI CTAG 6 cut(s) 135, 173, 1121, 1485, 1875, 1932
BfmI CTRYAG 1 cut(s) 202
BfrI CTTAAG 1 cut(s) 1435
BfuI GTATCC 1 cut(s) 964
BglII AGATCT 2 cut(s) 1045, 1502
BisI GCNGC 2 cut(s) 405, 1145
BlsI GCNGC 2 cut(s) 406, 1146
BmcAI AGTACT 1 cut(s) 14
Bme1390I CCNGG 5 cut(s) 324, 525, 1215, 1459, 1571
Bme18I GGWCC 3 cut(s) 1117, 1401, 1605
BmgT120I GGNCC 6 cut(s) 479, 521, 1117, 1401, 1460, 1605
BmiI GGNNCC 1 cut(s) 1118
BmrFI CCNGG 5 cut(s) 324, 525, 1215, 1459, 1571
BmsI GCATC 7 cut(s) 75, 217, 696, 713, 1030, 1645, 1752
BpiI GAAGAC 1 cut(s) 1688
BplI GAGNNNNNCTC 2 cut(s) 52, 84
Bpu14I TTCGAA 1 cut(s) 1550
BpuMI CCSGG 2 cut(s) 1459, 1571
BsaBI GATNNNNATC 2 cut(s) 1044, 1447
BsaI GGTCTC 1 cut(s) 1890
BsaJI CCNNGG 6 cut(s) 317, 364, 375, 514, 524, 1214
BsaWI WCCGGW 1 cut(s) 100
BsaXI ACNNNNNCTCC 4 cut(s) 742, 772, 971, 1001
Bsc4I CCNNNNNNNGG 2 cut(s) 323, 1552
Bse1I ACTGG 1 cut(s) 21
Bse21I CCTNAGG 2 cut(s) 543, 1601
Bse3DI GCAATG 1 cut(s) 294
Bse8I GATNNNNATC 2 cut(s) 1044, 1447
BseAI TCCGGA 1 cut(s) 100
BseBI CCWGG 3 cut(s) 324, 525, 1215
BseDI CCNNGG 6 cut(s) 317, 364, 375, 514, 524, 1214
BseGI GGATG 4 cut(s) 361, 816, 1810, 1867
BseJI GATNNNNATC 2 cut(s) 1044, 1447
BseLI CCNNNNNNNGG 2 cut(s) 323, 1552
BseMI GCAATG 1 cut(s) 294
BseMII CTCAG 6 cut(s) 300, 534, 708, 957, 1370, 1906
BseNI ACTGG 1 cut(s) 21
BseRI GAGGAG 4 cut(s) 744, 747, 1709, 2009
BseXI GCAGC 2 cut(s) 391, 1156
BseYI CCCAGC 1 cut(s) 179
Bsh1236I CGCG 2 cut(s) 1038, 1077
Bsh1285I CGRYCG 1 cut(s) 1692
BshFI GGCC 5 cut(s) 322, 481, 523, 1462, 1706
BsiEI CGRYCG 1 cut(s) 1692
BsiHKAI GWGCWC 1 cut(s) 70
BsiSI CCGG 3 cut(s) 101, 1458, 1570
BslFI GGGAC 1 cut(s) 1256
BslI CCNNNNNNNGG 2 cut(s) 323, 1552
BsmAI GTCTC 5 cut(s) 852, 1327, 1555, 1627, 1890
BsmBI CGTCTC 1 cut(s) 1327
BsmFI GGGAC 1 cut(s) 1256
BsmI GAATGC 2 cut(s) 400, 1891
BsnI GGCC 5 cut(s) 322, 481, 523, 1462, 1706
Bso31I GGTCTC 1 cut(s) 1890
Bsp119I TTCGAA 1 cut(s) 1550
Bsp1286I GDGCHC 3 cut(s) 70, 134, 531
Bsp13I TCCGGA 1 cut(s) 100
Bsp143I GATC 7 cut(s) 568, 1045, 1382, 1442, 1502, 1689, 1864
Bsp19I CCATGG 2 cut(s) 364, 514
Bsp68I TCGCGA 1 cut(s) 1038
BspACI CCGC 5 cut(s) 477, 519, 1083, 1314, 2010
BspANI GGCC 5 cut(s) 322, 481, 523, 1462, 1706
BspCNI CTCAG 6 cut(s) 301, 535, 709, 956, 1369, 1905
BspEI TCCGGA 1 cut(s) 100
BspFNI CGCG 2 cut(s) 1038, 1077
BspHI TCATGA 1 cut(s) 1746
BspLI GGNNCC 1 cut(s) 1118
BspPI GGATC 2 cut(s) 1450, 1859
BspQI GCTCTTC 1 cut(s) 849
BspT104I TTCGAA 1 cut(s) 1550
BspTI CTTAAG 1 cut(s) 1435
BspTNI GGTCTC 1 cut(s) 1890
BsrDI GCAATG 1 cut(s) 294
BsrI ACTGG 1 cut(s) 21
BssECI CCNNGG 6 cut(s) 317, 364, 375, 514, 524, 1214
BssMI GATC 7 cut(s) 568, 1045, 1382, 1442, 1502, 1689, 1864
BssNAI GTATAC 1 cut(s) 1666
BssT1I CCWWGG 4 cut(s) 317, 364, 375, 514
Bst1107I GTATAC 1 cut(s) 1666
Bst2UI CCWGG 3 cut(s) 324, 525, 1215
Bst4CI ACNGT 6 cut(s) 143, 871, 886, 1011, 1258, 1429
Bst6I CTCTTC 2 cut(s) 849, 988
BstAFI CTTAAG 1 cut(s) 1435
BstAPI GCANNNNNTGC 1 cut(s) 710
BstBI TTCGAA 1 cut(s) 1550
BstC8I GCNNGC 7 cut(s) 479, 521, 1087, 1224, 1318, 1924, 1990
BstDEI CTNAG 8 cut(s) 309, 543, 717, 943, 1018, 1356, 1601, 1892
BstDSI CCRYGG 2 cut(s) 364, 514
BstF5I GGATG 4 cut(s) 361, 816, 1810, 1867
BstFNI CGCG 2 cut(s) 1038, 1077
BstHHI GCGC 3 cut(s) 840, 1079, 1149
BstKTI GATC 7 cut(s) 571, 1048, 1385, 1445, 1505, 1692, 1867
BstMAI GTCTC 5 cut(s) 852, 1327, 1555, 1627, 1890
BstMBI GATC 7 cut(s) 568, 1045, 1382, 1442, 1502, 1689, 1864
BstMCI CGRYCG 1 cut(s) 1692
BstMWI GCNNNNNNNGC 3 cut(s) 404, 701, 710
BstNI CCWGG 3 cut(s) 324, 525, 1215
BstNSI RCATGY 1 cut(s) 1517
BstSCI CCNGG 5 cut(s) 322, 523, 1213, 1457, 1569
BstSFI CTRYAG 1 cut(s) 202
BstUI CGCG 2 cut(s) 1038, 1077
BstV1I GCAGC 2 cut(s) 391, 1156
BstV2I GAAGAC 1 cut(s) 1688
BstX2I RGATCY 3 cut(s) 1045, 1442, 1502
BstXI CCANNNNNNTGG 1 cut(s) 571
BstYI RGATCY 3 cut(s) 1045, 1442, 1502
BstZ17I GTATAC 1 cut(s) 1666
Bsu36I CCTNAGG 2 cut(s) 543, 1601
BsuI GTATCC 1 cut(s) 964
BsuRI GGCC 5 cut(s) 322, 481, 523, 1462, 1706
BtgI CCRYGG 2 cut(s) 364, 514
BtgZI GCGATG 1 cut(s) 1053
BtsCI GGATG 4 cut(s) 361, 816, 1810, 1867
BtsI GCAGTG 1 cut(s) 70
BtsIMutI CAGTG 3 cut(s) 28, 70, 148
BtuMI TCGCGA 1 cut(s) 1038
Cac8I GCNNGC 7 cut(s) 479, 521, 1087, 1224, 1318, 1924, 1990
CciI TCATGA 1 cut(s) 1746
CfoI GCGC 3 cut(s) 840, 1079, 1149
Cfr13I GGNCC 6 cut(s) 479, 521, 1117, 1401, 1460, 1605
CseI GACGC 1 cut(s) 1309
Csp6I GTAC 3 cut(s) 13, 286, 736
CspCI CAANNNNNGTGG 2 cut(s) 1420, 1455
CviQI GTAC 3 cut(s) 13, 286, 736
DdeI CTNAG 8 cut(s) 309, 543, 717, 943, 1018, 1356, 1601, 1892
DpnI GATC 7 cut(s) 570, 1047, 1384, 1444, 1504, 1691, 1866
DpnII GATC 7 cut(s) 568, 1045, 1382, 1442, 1502, 1689, 1864
DraIII CACNNNGTG 1 cut(s) 1412
Eam1104I CTCTTC 2 cut(s) 849, 988
EarI CTCTTC 2 cut(s) 849, 988
Eco130I CCWWGG 4 cut(s) 317, 364, 375, 514
Eco147I AGGCCT 1 cut(s) 322
Eco24I GRGCYC 2 cut(s) 134, 531
Eco31I GGTCTC 1 cut(s) 1890
Eco47I GGWCC 3 cut(s) 1117, 1401, 1605
Eco81I CCTNAGG 2 cut(s) 543, 1601
EcoO109I RGGNCCY 1 cut(s) 1117
EcoRII CCWGG 3 cut(s) 322, 523, 1213
EcoT14I CCWWGG 4 cut(s) 317, 364, 375, 514
EcoT22I ATGCAT 2 cut(s) 232, 610
EcoT38I GRGCYC 2 cut(s) 134, 531
ErhI CCWWGG 4 cut(s) 317, 364, 375, 514
Esp3I CGTCTC 1 cut(s) 1327
FalI AAGNNNNNCTT 2 cut(s) 1429, 1461
FaqI GGGAC 1 cut(s) 1256
FauI CCCGC 3 cut(s) 470, 512, 1090
FblI GTMKAC 2 cut(s) 667, 1665
Fnu4HI GCNGC 2 cut(s) 405, 1145
FokI GGATG 4 cut(s) 368, 823, 1817, 1874
FriOI GRGCYC 2 cut(s) 134, 531
Fsp4HI GCNGC 2 cut(s) 405, 1145
FspBI CTAG 6 cut(s) 135, 173, 1121, 1485, 1875, 1932
GlaI GCGC 3 cut(s) 839, 1078, 1148
GluI GCNGC 2 cut(s) 405, 1145
GsaI CCCAGC 1 cut(s) 183
HaeIII GGCC 5 cut(s) 322, 481, 523, 1462, 1706
HapII CCGG 3 cut(s) 101, 1458, 1570
HgaI GACGC 1 cut(s) 1309
HhaI GCGC 3 cut(s) 840, 1079, 1149
Hin6I GCGC 3 cut(s) 838, 1077, 1147
HinP1I GCGC 3 cut(s) 838, 1077, 1147
HincII GTYRAC 2 cut(s) 1030, 1432
HindII GTYRAC 2 cut(s) 1030, 1432
HindIII AAGCTT 3 cut(s) 636, 1577, 1638
HinfI GANTC 8 cut(s) 313, 644, 751, 845, 1454, 1532, 1852, 1983
HpaII CCGG 3 cut(s) 101, 1458, 1570
HphI GGTGA 3 cut(s) 800, 1424, 1527
Hpy166II GTNNAC 7 cut(s) 254, 361, 668, 1030, 1401, 1432, 1666
Hpy8I GTNNAC 7 cut(s) 254, 361, 668, 1030, 1401, 1432, 1666
Hpy99I CGWCG 1 cut(s) 350
HpyAV CCTTC 2 cut(s) 1387, 1546
HpyCH4III ACNGT 6 cut(s) 143, 871, 886, 1011, 1258, 1429
HpyCH4IV ACGT 1 cut(s) 734
HpyF10VI GCNNNNNNNGC 3 cut(s) 404, 701, 710
HpyF3I CTNAG 8 cut(s) 309, 543, 717, 943, 1018, 1356, 1601, 1892
HpySE526I ACGT 1 cut(s) 734
HspAI GCGC 3 cut(s) 838, 1077, 1147
Kpn2I TCCGGA 1 cut(s) 100
Kzo9I GATC 7 cut(s) 568, 1045, 1382, 1442, 1502, 1689, 1864
LguI GCTCTTC 1 cut(s) 849
Lsp1109I GCAGC 2 cut(s) 391, 1156
LweI GCATC 7 cut(s) 75, 217, 696, 713, 1030, 1645, 1752
MaeI CTAG 6 cut(s) 135, 173, 1121, 1485, 1875, 1932
MaeII ACGT 1 cut(s) 734
MaeIII GTNAC 5 cut(s) 143, 821, 1199, 1303, 1359
MalI GATC 7 cut(s) 570, 1047, 1384, 1444, 1504, 1691, 1866
MboI GATC 7 cut(s) 568, 1045, 1382, 1442, 1502, 1689, 1864
MboII GAAGA 9 cut(s) 256, 866, 975, 1040, 1043, 1437, 1512, 1693, 1822
MfeI CAATTG 1 cut(s) 1659
MflI RGATCY 3 cut(s) 1045, 1442, 1502
MhlI GDGCHC 3 cut(s) 70, 134, 531
MluCI AATT 9 cut(s) 95, 237, 1131, 1297, 1659, 1676, 1904, 1911, 2013
MlyI GAGTC 2 cut(s) 745, 854
MmeI TCCRAC 3 cut(s) 1096, 1680, 1803
Mph1103I ATGCAT 2 cut(s) 232, 610
MroI TCCGGA 1 cut(s) 100
MseI TTAA 6 cut(s) 873, 1251, 1436, 1490, 1581, 2019
MslI CAYNNNNRTG 4 cut(s) 536, 1347, 1518, 1860
MspA1I CMGCKG 2 cut(s) 477, 1085
MspCI CTTAAG 1 cut(s) 1435
MspI CCGG 3 cut(s) 101, 1458, 1570
MspR9I CCNGG 5 cut(s) 324, 525, 1215, 1459, 1571
MunI CAATTG 1 cut(s) 1659
Mva1269I GAATGC 2 cut(s) 400, 1891
MvaI CCWGG 3 cut(s) 324, 525, 1215
MvnI CGCG 2 cut(s) 1038, 1077
MwoI GCNNNNNNNGC 3 cut(s) 404, 701, 710
NciI CCSGG 2 cut(s) 1459, 1571
NcoI CCATGG 2 cut(s) 364, 514
NdeII GATC 7 cut(s) 568, 1045, 1382, 1442, 1502, 1689, 1864
NlaIV GGNNCC 1 cut(s) 1118
NmuCI GTSAC 2 cut(s) 143, 821
NruI TCGCGA 1 cut(s) 1038
NsiI ATGCAT 2 cut(s) 232, 610
NspI RCATGY 1 cut(s) 1517
NspV TTCGAA 1 cut(s) 1550
PagI TCATGA 1 cut(s) 1746
PceI AGGCCT 1 cut(s) 322
PciSI GCTCTTC 1 cut(s) 849
PcsI WCGNNNNNNNCGW 1 cut(s) 875
PctI GAATGC 2 cut(s) 400, 1891
PfeI GAWTC 6 cut(s) 313, 644, 1454, 1532, 1852, 1983
PflFI GACNNNGTC 1 cut(s) 491
PflMI CCANNNNNTGG 1 cut(s) 323
PkrI GCNGC 2 cut(s) 406, 1146
Ple19I CGATCG 1 cut(s) 1692
PleI GAGTC 2 cut(s) 745, 853
PpsI GAGTC 2 cut(s) 745, 853
PpuMI RGGWCCY 1 cut(s) 1117
PshBI ATTAAT 1 cut(s) 2019
Psp5II RGGWCCY 1 cut(s) 1117
Psp6I CCWGG 3 cut(s) 322, 523, 1213
PspFI CCCAGC 1 cut(s) 179
PspGI CCWGG 3 cut(s) 322, 523, 1213
PspN4I GGNNCC 1 cut(s) 1118
PspPI GGNCC 6 cut(s) 479, 521, 1117, 1401, 1460, 1605
PspPPI RGGWCCY 1 cut(s) 1117
PsuI RGATCY 3 cut(s) 1045, 1442, 1502
PsyI GACNNNGTC 1 cut(s) 491
PvuI CGATCG 1 cut(s) 1692
RruI TCGCGA 1 cut(s) 1038
RsaI GTAC 3 cut(s) 14, 287, 737
RsaNI GTAC 3 cut(s) 13, 286, 736
RseI CAYNNNNRTG 4 cut(s) 536, 1347, 1518, 1860
SapI GCTCTTC 1 cut(s) 849
SaqAI TTAA 6 cut(s) 873, 1251, 1436, 1490, 1581, 2019
SatI GCNGC 2 cut(s) 405, 1145
Sau3AI GATC 7 cut(s) 568, 1045, 1382, 1442, 1502, 1689, 1864
Sau96I GGNCC 6 cut(s) 479, 521, 1117, 1401, 1460, 1605
ScaI AGTACT 1 cut(s) 14
SchI GAGTC 2 cut(s) 745, 854
ScrFI CCNGG 5 cut(s) 324, 525, 1215, 1459, 1571
SduI GDGCHC 3 cut(s) 70, 134, 531
SfaNI GCATC 7 cut(s) 75, 217, 696, 713, 1030, 1645, 1752
SfcI CTRYAG 1 cut(s) 202
SfuI TTCGAA 1 cut(s) 1550
SinI GGWCC 3 cut(s) 1117, 1401, 1605
SmiMI CAYNNNNRTG 4 cut(s) 536, 1347, 1518, 1860
SmlI CTYRAG 1 cut(s) 1435
SmoI CTYRAG 1 cut(s) 1435
Sse9I AATT 9 cut(s) 95, 237, 1131, 1297, 1659, 1676, 1904, 1911, 2013
SseBI AGGCCT 1 cut(s) 322
SsiI CCGC 5 cut(s) 477, 519, 1083, 1314, 2010
SspI AATATT 1 cut(s) 1759
SspMI CTAG 6 cut(s) 135, 173, 1121, 1485, 1875, 1932
StuI AGGCCT 1 cut(s) 322
StyD4I CCNGG 5 cut(s) 322, 523, 1213, 1457, 1569
StyI CCWWGG 4 cut(s) 317, 364, 375, 514
TaaI ACNGT 6 cut(s) 143, 871, 886, 1011, 1258, 1429
TaiI ACGT 1 cut(s) 737
TaqI TCGA 6 cut(s) 660, 878, 1173, 1550, 1643, 1692
TasI AATT 9 cut(s) 95, 237, 1131, 1297, 1659, 1676, 1904, 1911, 2013
TatI WGTACW 1 cut(s) 12
TfiI GAWTC 6 cut(s) 313, 644, 1454, 1532, 1852, 1983
Tru1I TTAA 6 cut(s) 873, 1251, 1436, 1490, 1581, 2019
Tru9I TTAA 6 cut(s) 873, 1251, 1436, 1490, 1581, 2019
TscAI CASTG 3 cut(s) 28, 70, 148
TseFI GTSAC 2 cut(s) 143, 821
TseI GCWGC 2 cut(s) 404, 1144
Tsp45I GTSAC 2 cut(s) 143, 821
TspGWI ACGGA 1 cut(s) 1597
TspRI CASTG 3 cut(s) 28, 70, 148
Tth111I GACNNNGTC 1 cut(s) 491
Van91I CCANNNNNTGG 1 cut(s) 323
Vha464I CTTAAG 1 cut(s) 1435
VpaK11BI GGWCC 3 cut(s) 1117, 1401, 1605
VspI ATTAAT 1 cut(s) 2019
XapI RAATTY 4 cut(s) 95, 237, 1131, 1911
XceI RCATGY 1 cut(s) 1517
XcmI CCANNNNNNNNNTGG 2 cut(s) 521, 1786
XmiI GTMKAC 2 cut(s) 667, 1665
XspI CTAG 6 cut(s) 135, 173, 1121, 1485, 1875, 1932
ZrmI AGTACT 1 cut(s) 14
Zsp2I ATGCAT 2 cut(s) 232, 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.