Rh2DG370300

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
52636170 .. 52645997
9828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG370300.1

Sequence Viewer

Length: 315 bp
ATGTTGCAATCTAACAAGGTCAAGGCTGCAATGACTTTGACAGATGGCCGCCAGATGGTTACAACCGCCAACACTAATGCAAATAACTTTATAGTCATAGGTTATGAACCATTTGGTTTTATAGGTTATGAACCATTAACTTTGAACATCAATAGCCCTCTGGCTGATCAGGAGGATGGGGCTTGTTCTGGTATTGGCTATGGCCATTCCTCCATTCCAAGAGGCATCGGGCTTGGGTTCGTTTTGGGAGAGGTGTGTGCTGAGATTGTGATCAAGTTTAGGAGACAGGCTTTGGGAGCAAAAGAGAATCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

104

Amino Acids

11.12

Weight (kDa)

5.7

Isoelectric Point (pI)

33.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 49, 66
AcoI YGGCCR 2 cut(s) 46, 202
AfiI CCNNNNNNNGG 1 cut(s) 55
AgsI TTSAA 1 cut(s) 145
Alw26I GTCTC 1 cut(s) 277
AoxI GGCC 2 cut(s) 46, 202
ApeKI GCWGC 1 cut(s) 26
BalI TGGCCA 1 cut(s) 204
BbvI GCAGC 1 cut(s) 13
BccI CCATC 3 cut(s) 38, 49, 170
BclI TGATCA 2 cut(s) 166, 270
BcoDI GTCTC 1 cut(s) 277
BisI GCNGC 2 cut(s) 27, 49
BlsI GCNGC 2 cut(s) 28, 50
BmsI GCATC 1 cut(s) 234
BsaBI GATNNNNATC 1 cut(s) 269
Bsc4I CCNNNNNNNGG 1 cut(s) 55
Bse3DI GCAATG 1 cut(s) 36
Bse8I GATNNNNATC 1 cut(s) 269
BseGI GGATG 1 cut(s) 181
BseJI GATNNNNATC 1 cut(s) 269
BseLI CCNNNNNNNGG 1 cut(s) 55
BseMI GCAATG 1 cut(s) 36
BseMII CTCAG 1 cut(s) 252
BseXI GCAGC 1 cut(s) 13
BshFI GGCC 2 cut(s) 48, 204
BslI CCNNNNNNNGG 1 cut(s) 55
BsmAI GTCTC 1 cut(s) 277
BsnI GGCC 2 cut(s) 48, 204
Bsp143I GATC 2 cut(s) 166, 270
BspACI CCGC 2 cut(s) 49, 66
BspANI GGCC 2 cut(s) 48, 204
BspCNI CTCAG 1 cut(s) 253
BsrDI GCAATG 1 cut(s) 36
BssMI GATC 2 cut(s) 166, 270
BstDEI CTNAG 1 cut(s) 261
BstF5I GGATG 1 cut(s) 181
BstKTI GATC 2 cut(s) 169, 273
BstMAI GTCTC 1 cut(s) 277
BstMBI GATC 2 cut(s) 166, 270
BstMWI GCNNNNNNNGC 1 cut(s) 296
BstV1I GCAGC 1 cut(s) 13
BsuRI GGCC 2 cut(s) 48, 204
BtsCI GGATG 1 cut(s) 181
CviJI RGCY 9 cut(s) 26, 48, 156, 164, 182, 198, 204, 232, 290
CviKI_1 RGCY 9 cut(s) 26, 48, 156, 164, 182, 198, 204, 232, 290
DdeI CTNAG 1 cut(s) 261
DpnI GATC 2 cut(s) 168, 272
DpnII GATC 2 cut(s) 166, 270
EaeI YGGCCR 2 cut(s) 46, 202
FaiI YATR 6 cut(s) 92, 98, 105, 122, 129, 201
FbaI TGATCA 2 cut(s) 166, 270
Fnu4HI GCNGC 2 cut(s) 27, 49
FokI GGATG 1 cut(s) 188
Fsp4HI GCNGC 2 cut(s) 27, 49
GluI GCNGC 2 cut(s) 27, 49
HaeIII GGCC 2 cut(s) 48, 204
HinfI GANTC 1 cut(s) 307
Hpy188III TCNNGA 1 cut(s) 170
HpyCH4V TGCA 3 cut(s) 7, 29, 80
HpyF10VI GCNNNNNNNGC 1 cut(s) 296
HpyF3I CTNAG 1 cut(s) 261
Ksp22I TGATCA 2 cut(s) 166, 270
Kzo9I GATC 2 cut(s) 166, 270
LmnI GCTCC 1 cut(s) 296
LpnPI CCDG 5 cut(s) 65, 146, 155, 174, 272
Lsp1109I GCAGC 1 cut(s) 13
LweI GCATC 1 cut(s) 234
MaeIII GTNAC 1 cut(s) 58
MalI GATC 2 cut(s) 168, 272
MboI GATC 2 cut(s) 166, 270
MlsI TGGCCA 1 cut(s) 204
MluNI TGGCCA 1 cut(s) 204
MnlI CCTC 5 cut(s) 166, 168, 215, 220, 244
Mox20I TGGCCA 1 cut(s) 204
MscI TGGCCA 1 cut(s) 204
MseI TTAA 1 cut(s) 137
Msp20I TGGCCA 1 cut(s) 204
MwoI GCNNNNNNNGC 1 cut(s) 296
NdeII GATC 2 cut(s) 166, 270
PfeI GAWTC 1 cut(s) 307
PkrI GCNGC 2 cut(s) 28, 50
SaqAI TTAA 1 cut(s) 137
SatI GCNGC 2 cut(s) 27, 49
Sau3AI GATC 2 cut(s) 166, 270
SetI ASST 4 cut(s) 21, 103, 127, 255
SfaNI GCATC 1 cut(s) 234
SsiI CCGC 2 cut(s) 49, 66
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 1 cut(s) 307
Tru1I TTAA 1 cut(s) 137
Tru9I TTAA 1 cut(s) 137
TseI GCWGC 1 cut(s) 26
TspDTI ATGAA 2 cut(s) 120, 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.