Rh7AG257600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
26204503 .. 26204946
444 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG257600.1

Sequence Viewer

Length: 444 bp
ATGTCCTTGGTTCCTCAGACTCTGAGTTTCCAACTCGACTCTCTTTTCCTTTCTAACTTTAACATCTCAAACACAACCATCGGGGCTGACTGGGATATGACCCTTCAAATAGAGAACCCCAACTCGGTCACAAAGATTCACTTCAACATCATAAATGGCTTGATTTCGTACAAAGACAACTCTCTTGCAATGTACTCGATAAAGCCATTTGAGTTGGGATATAGGGAGCACAGACTAGTGCACTTGAAGATATCAAAATATCAGACAATGGAAAAGAATGGATGGGTTTCGGATGAGATCAATATGCAACGAGATGAGAATGGAGCTATTAATTTCAGCCTCACAATGTTTGTTTCAGCTACATATACAACTGGCTGGTGGGGAATCAAAAAGTTTGTATCGAACCCTCAGTGTTTGGATTTTGAGGGTTGCCTTCCTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

147

Amino Acids

16.84

Weight (kDa)

5.51

Isoelectric Point (pI)

21.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 170, 194
AfiI CCNNNNNNNGG 1 cut(s) 124
AgsI TTSAA 3 cut(s) 107, 145, 247
AhlI ACTAGT 1 cut(s) 235
AluBI AGCT 2 cut(s) 326, 359
AluI AGCT 2 cut(s) 326, 359
Alw21I GWGCWC 2 cut(s) 231, 243
Alw44I GTGCAC 1 cut(s) 239
AlwNI CAGNNNCTG 1 cut(s) 22
ApaLI GTGCAC 1 cut(s) 239
AseI ATTAAT 1 cut(s) 330
BaeGI GKGCMC 1 cut(s) 243
Bbv12I GWGCWC 2 cut(s) 231, 243
BccI CCATC 2 cut(s) 86, 276
BcgI CGANNNNNNTGC 2 cut(s) 177, 211
BcuI ACTAGT 1 cut(s) 235
BfaI CTAG 1 cut(s) 236
BmiI GGNNCC 1 cut(s) 12
BmrI ACTGGG 1 cut(s) 100
BmuI ACTGGG 1 cut(s) 100
BsaJI CCNNGG 1 cut(s) 6
Bsc4I CCNNNNNNNGG 1 cut(s) 124
Bse1I ACTGG 2 cut(s) 95, 376
Bse3DI GCAATG 1 cut(s) 195
BseDI CCNNGG 1 cut(s) 6
BseGI GGATG 2 cut(s) 287, 298
BseLI CCNNNNNNNGG 1 cut(s) 124
BseMI GCAATG 1 cut(s) 195
BseMII CTCAG 3 cut(s) 14, 29, 422
BseNI ACTGG 2 cut(s) 95, 376
BseSI GKGCMC 1 cut(s) 243
BsiHKAI GWGCWC 2 cut(s) 231, 243
BslI CCNNNNNNNGG 1 cut(s) 124
Bsp1286I GDGCHC 2 cut(s) 231, 243
Bsp143I GATC 1 cut(s) 297
BspCNI CTCAG 3 cut(s) 15, 28, 421
BspLI GGNNCC 1 cut(s) 12
BsrDI GCAATG 1 cut(s) 195
BsrI ACTGG 2 cut(s) 95, 376
BssECI CCNNGG 1 cut(s) 6
BssMI GATC 1 cut(s) 297
BssT1I CCWWGG 1 cut(s) 6
BstDEI CTNAG 3 cut(s) 15, 23, 408
BstF5I GGATG 2 cut(s) 287, 298
BstKTI GATC 1 cut(s) 300
BstMBI GATC 1 cut(s) 297
BstSLI GKGCMC 1 cut(s) 243
BtsCI GGATG 2 cut(s) 287, 298
BtsIMutI CAGTG 1 cut(s) 416
CaiI CAGNNNCTG 1 cut(s) 22
Csp6I GTAC 2 cut(s) 169, 193
CviJI RGCY 7 cut(s) 86, 159, 205, 326, 339, 359, 375
CviKI_1 RGCY 7 cut(s) 86, 159, 205, 326, 339, 359, 375
CviQI GTAC 2 cut(s) 169, 193
DdeI CTNAG 3 cut(s) 15, 23, 408
DpnI GATC 1 cut(s) 299
DpnII GATC 1 cut(s) 297
Eco130I CCWWGG 1 cut(s) 6
Eco32I GATATC 1 cut(s) 252
EcoRV GATATC 1 cut(s) 252
EcoT14I CCWWGG 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 6
FaiI YATR 6 cut(s) 98, 152, 222, 305, 364, 366
FalI AAGNNNNNCTT 2 cut(s) 125, 157
FokI GGATG 2 cut(s) 294, 305
FspBI CTAG 1 cut(s) 236
HinfI GANTC 4 cut(s) 19, 38, 136, 384
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 4 cut(s) 18, 24, 264, 292
Hpy8I GTNNAC 1 cut(s) 241
HpyAV CCTTC 2 cut(s) 113, 443
HpyCH4V TGCA 3 cut(s) 188, 241, 307
HpyF3I CTNAG 3 cut(s) 15, 23, 408
Kzo9I GATC 1 cut(s) 297
LmnI GCTCC 2 cut(s) 226, 323
LpnPI CCDG 3 cut(s) 76, 357, 361
MaeI CTAG 1 cut(s) 236
MaeIII GTNAC 1 cut(s) 127
MalI GATC 1 cut(s) 299
MboI GATC 1 cut(s) 297
MboII GAAGA 1 cut(s) 259
MhlI GDGCHC 2 cut(s) 231, 243
MluCI AATT 1 cut(s) 331
MlyI GAGTC 2 cut(s) 13, 32
MmeI TCCRAC 1 cut(s) 55
MnlI CCTC 4 cut(s) 24, 350, 417, 418
MseI TTAA 2 cut(s) 60, 330
NdeII GATC 1 cut(s) 297
NlaIV GGNNCC 1 cut(s) 12
NmuCI GTSAC 1 cut(s) 127
PfeI GAWTC 2 cut(s) 136, 384
PleI GAGTC 2 cut(s) 13, 32
PpsI GAGTC 2 cut(s) 13, 32
PshBI ATTAAT 1 cut(s) 330
PspN4I GGNNCC 1 cut(s) 12
PstNI CAGNNNCTG 1 cut(s) 22
RsaI GTAC 2 cut(s) 170, 194
RsaNI GTAC 2 cut(s) 169, 193
SaqAI TTAA 2 cut(s) 60, 330
Sau3AI GATC 1 cut(s) 297
SchI GAGTC 2 cut(s) 13, 32
SduI GDGCHC 2 cut(s) 231, 243
SetI ASST 2 cut(s) 328, 361
SpeI ACTAGT 1 cut(s) 235
Sse9I AATT 1 cut(s) 331
SspMI CTAG 1 cut(s) 236
StyI CCWWGG 1 cut(s) 6
TaqI TCGA 3 cut(s) 36, 197, 401
TaqII GACCGA 1 cut(s) 115
TasI AATT 1 cut(s) 331
TatI WGTACW 1 cut(s) 192
TfiI GAWTC 2 cut(s) 136, 384
Tru1I TTAA 2 cut(s) 60, 330
Tru9I TTAA 2 cut(s) 60, 330
TscAI CASTG 1 cut(s) 416
TseFI GTSAC 1 cut(s) 127
Tsp45I GTSAC 1 cut(s) 127
TspRI CASTG 1 cut(s) 416
VneI GTGCAC 1 cut(s) 239
VspI ATTAAT 1 cut(s) 330
XspI CTAG 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.