Rh7DG309500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
36241456 .. 36250627
9172 bp
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UTR
Exon/CDS
Intron
Rh7DG309500.1

Sequence Viewer

Length: 387 bp
ATGTCCTTGGTTCACCAAACTCCAAATTTCCAACTCAAATCTCTTTTCCTTTCTAACTTTAACATCTCAAACACAACCTTCGGGGCTGACTGGGATATAACTCTTAAAAGAGAGAACCCGAATGTGGTCAGGAATATTCACTTCGATGGCATAAAGGGCTTGATTTCGTACAAAGACAACTCTCTTGCAATCTACTTGATAGAGCCATTTAAATTGAGATATAGGGAGCATAGACTTGTGCACTTGAAGATATCAAAGTATCAGACAACAACAAAGAATGGATGGGTTTTGGATGAGATCAATAGGAAACTAGATGAGAATGGAGCTGTTAATCAGCATGACACTGACAAAGTAGAGAGAAAACTAATTGTAATACCTTTGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.98

Weight (kDa)

9.19

Isoelectric Point (pI)

13.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 25
AfaI GTAC 1 cut(s) 170
AfiI CCNNNNNNNGG 1 cut(s) 124
AgsI TTSAA 1 cut(s) 247
AluBI AGCT 1 cut(s) 326
AluI AGCT 1 cut(s) 326
Alw21I GWGCWC 1 cut(s) 243
Alw44I GTGCAC 1 cut(s) 239
ApaLI GTGCAC 1 cut(s) 239
ApoI RAATTY 1 cut(s) 25
AsuHPI GGTGA 1 cut(s) 5
BaeGI GKGCMC 1 cut(s) 243
Bbv12I GWGCWC 1 cut(s) 243
BccI CCATC 2 cut(s) 140, 276
BfaI CTAG 1 cut(s) 311
BmrI ACTGGG 1 cut(s) 100
BmuI ACTGGG 1 cut(s) 100
BsaJI CCNNGG 1 cut(s) 6
Bsc4I CCNNNNNNNGG 1 cut(s) 124
Bse1I ACTGG 1 cut(s) 95
BseDI CCNNGG 1 cut(s) 6
BseGI GGATG 2 cut(s) 287, 298
BseLI CCNNNNNNNGG 1 cut(s) 124
BseNI ACTGG 1 cut(s) 95
BseSI GKGCMC 1 cut(s) 243
BsiHKAI GWGCWC 1 cut(s) 243
BslI CCNNNNNNNGG 1 cut(s) 124
Bsp1286I GDGCHC 1 cut(s) 243
Bsp143I GATC 1 cut(s) 297
BsrI ACTGG 1 cut(s) 95
BssECI CCNNGG 1 cut(s) 6
BssMI GATC 1 cut(s) 297
BssT1I CCWWGG 1 cut(s) 6
BstF5I GGATG 2 cut(s) 287, 298
BstKTI GATC 1 cut(s) 300
BstMBI GATC 1 cut(s) 297
BstMWI GCNNNNNNNGC 1 cut(s) 156
BstSLI GKGCMC 1 cut(s) 243
BtsCI GGATG 2 cut(s) 287, 298
BtsIMutI CAGTG 1 cut(s) 342
Csp6I GTAC 1 cut(s) 169
CviAII CATG 1 cut(s) 338
CviJI RGCY 4 cut(s) 86, 159, 205, 326
CviKI_1 RGCY 4 cut(s) 86, 159, 205, 326
CviQI GTAC 1 cut(s) 169
DpnI GATC 1 cut(s) 299
DpnII GATC 1 cut(s) 297
DraI TTTAAA 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 6
Eco32I GATATC 1 cut(s) 252
EcoRV GATATC 1 cut(s) 252
EcoT14I CCWWGG 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 6
FaeI CATG 1 cut(s) 341
FaiI YATR 5 cut(s) 98, 152, 222, 231, 339
FatI CATG 1 cut(s) 337
FokI GGATG 2 cut(s) 294, 305
FspBI CTAG 1 cut(s) 311
Hin1II CATG 1 cut(s) 341
HphI GGTGA 1 cut(s) 5
Hpy166II GTNNAC 2 cut(s) 13, 241
Hpy188I TCNGA 1 cut(s) 264
Hpy188III TCNNGA 1 cut(s) 130
Hpy8I GTNNAC 2 cut(s) 13, 241
HpyAV CCTTC 1 cut(s) 88
HpyCH4V TGCA 2 cut(s) 188, 241
HpyF10VI GCNNNNNNNGC 1 cut(s) 156
Hsp92II CATG 1 cut(s) 341
Kzo9I GATC 1 cut(s) 297
LmnI GCTCC 2 cut(s) 226, 323
LpnPI CCDG 2 cut(s) 76, 115
MaeI CTAG 1 cut(s) 311
MalI GATC 1 cut(s) 299
MboI GATC 1 cut(s) 297
MboII GAAGA 1 cut(s) 259
MhlI GDGCHC 1 cut(s) 243
MluCI AATT 3 cut(s) 25, 212, 366
MmeI TCCRAC 1 cut(s) 55
MseI TTAA 4 cut(s) 60, 105, 210, 330
MslI CAYNNNNRTG 1 cut(s) 144
MwoI GCNNNNNNNGC 1 cut(s) 156
NdeII GATC 1 cut(s) 297
NlaIII CATG 1 cut(s) 341
RsaI GTAC 1 cut(s) 170
RsaNI GTAC 1 cut(s) 169
RseI CAYNNNNRTG 1 cut(s) 144
SaqAI TTAA 4 cut(s) 60, 105, 210, 330
Sau3AI GATC 1 cut(s) 297
SduI GDGCHC 1 cut(s) 243
SetI ASST 3 cut(s) 80, 328, 379
SmiI ATTTAAAT 1 cut(s) 211
SmiMI CAYNNNNRTG 1 cut(s) 144
Sse9I AATT 3 cut(s) 25, 212, 366
SspI AATATT 1 cut(s) 136
SspMI CTAG 1 cut(s) 311
StyI CCWWGG 1 cut(s) 6
SwaI ATTTAAAT 1 cut(s) 211
TaqI TCGA 1 cut(s) 144
TasI AATT 3 cut(s) 25, 212, 366
Tru1I TTAA 4 cut(s) 60, 105, 210, 330
Tru9I TTAA 4 cut(s) 60, 105, 210, 330
TscAI CASTG 1 cut(s) 349
TspRI CASTG 1 cut(s) 349
VneI GTGCAC 1 cut(s) 239
XapI RAATTY 1 cut(s) 25
XspI CTAG 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.