Rh7DG264200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
28119689 .. 28120782
1094 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG264200.1

Sequence Viewer

Length: 345 bp
ATGTCACATAAAGCTTTCTGTGGCATCCAGAAGGGAGGTGCCACGAAATACAAAGACAACTCTCTTGCAATAAACTCGATAAAACCATTTGAGTTGGGATATTGGGAGCACAGACTAGTGCACTTGAAGATATCAAAATATCAGACAATGAAAAAGAATGGATGGGTTTCGGATGAGATCAATATGCAACGAGATGAGAATGGAGCTGTTAATTTTAGCCTCACAATGTTTGTTTCAGCTACTTATACAACTGGCTGGTGGGGAATCAAAAAGTTTGTATCGAACCCTCAGTGTTTGGATTTGAGGGTTGCCTTCCTTCCTAAGCTGAGTTCGGAAATTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.98

Weight (kDa)

9.45

Isoelectric Point (pI)

15.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 38
AgsI TTSAA 1 cut(s) 127
AhlI ACTAGT 1 cut(s) 115
AluBI AGCT 4 cut(s) 14, 206, 239, 325
AluI AGCT 4 cut(s) 14, 206, 239, 325
Alw21I GWGCWC 2 cut(s) 111, 123
Alw44I GTGCAC 1 cut(s) 119
ApaLI GTGCAC 1 cut(s) 119
BaeGI GKGCMC 1 cut(s) 123
BanI GGYRCC 1 cut(s) 38
Bbv12I GWGCWC 2 cut(s) 111, 123
BccI CCATC 1 cut(s) 156
BcgI CGANNNNNNTGC 2 cut(s) 57, 91
BcuI ACTAGT 1 cut(s) 115
BfaI CTAG 1 cut(s) 116
BmiI GGNNCC 1 cut(s) 40
BmsI GCATC 1 cut(s) 33
Bpu10I CCTNAGC 1 cut(s) 321
Bse1I ACTGG 1 cut(s) 256
BseGI GGATG 3 cut(s) 24, 167, 178
BseMII CTCAG 2 cut(s) 302, 317
BseNI ACTGG 1 cut(s) 256
BseSI GKGCMC 1 cut(s) 123
BshNI GGYRCC 1 cut(s) 38
BsiHKAI GWGCWC 2 cut(s) 111, 123
Bsp1286I GDGCHC 2 cut(s) 111, 123
Bsp143I GATC 1 cut(s) 177
BspCNI CTCAG 2 cut(s) 301, 318
BspLI GGNNCC 1 cut(s) 40
BspT107I GGYRCC 1 cut(s) 38
BsrI ACTGG 1 cut(s) 256
BssMI GATC 1 cut(s) 177
BstDEI CTNAG 3 cut(s) 288, 321, 326
BstF5I GGATG 3 cut(s) 24, 167, 178
BstKTI GATC 1 cut(s) 180
BstMBI GATC 1 cut(s) 177
BstSLI GKGCMC 1 cut(s) 123
BtsCI GGATG 3 cut(s) 24, 167, 178
BtsIMutI CAGTG 1 cut(s) 296
CviJI RGCY 6 cut(s) 14, 206, 219, 239, 255, 325
CviKI_1 RGCY 6 cut(s) 14, 206, 219, 239, 255, 325
DdeI CTNAG 3 cut(s) 288, 321, 326
DpnI GATC 1 cut(s) 179
DpnII GATC 1 cut(s) 177
Eco32I GATATC 1 cut(s) 132
EcoRV GATATC 1 cut(s) 132
FaiI YATR 3 cut(s) 9, 185, 246
FokI GGATG 3 cut(s) 11, 174, 185
FspBI CTAG 1 cut(s) 116
HindIII AAGCTT 1 cut(s) 12
HinfI GANTC 1 cut(s) 264
Hpy166II GTNNAC 1 cut(s) 121
Hpy188I TCNGA 3 cut(s) 144, 172, 334
Hpy188III TCNNGA 1 cut(s) 28
Hpy8I GTNNAC 1 cut(s) 121
HpyAV CCTTC 3 cut(s) 25, 322, 326
HpyCH4V TGCA 3 cut(s) 68, 121, 187
HpyF3I CTNAG 3 cut(s) 288, 321, 326
Kzo9I GATC 1 cut(s) 177
LmnI GCTCC 2 cut(s) 106, 203
LpnPI CCDG 3 cut(s) 41, 237, 241
LweI GCATC 1 cut(s) 33
MaeI CTAG 1 cut(s) 116
MaeIII GTNAC 1 cut(s) 3
MalI GATC 1 cut(s) 179
MboI GATC 1 cut(s) 177
MboII GAAGA 1 cut(s) 139
MhlI GDGCHC 2 cut(s) 111, 123
MluCI AATT 2 cut(s) 211, 336
MnlI CCTC 4 cut(s) 29, 230, 297, 297
MseI TTAA 1 cut(s) 210
NdeII GATC 1 cut(s) 177
NlaIV GGNNCC 1 cut(s) 40
NmuCI GTSAC 1 cut(s) 3
PfeI GAWTC 1 cut(s) 264
PspN4I GGNNCC 1 cut(s) 40
SaqAI TTAA 1 cut(s) 210
Sau3AI GATC 1 cut(s) 177
SduI GDGCHC 2 cut(s) 111, 123
SetI ASST 5 cut(s) 16, 40, 208, 241, 327
SfaNI GCATC 1 cut(s) 33
SgeI CNNG 9 cut(s) 40, 55, 77, 88, 128, 136, 203, 264, 268
SpeI ACTAGT 1 cut(s) 115
Sse9I AATT 2 cut(s) 211, 336
SspMI CTAG 1 cut(s) 116
TaqI TCGA 2 cut(s) 77, 281
TasI AATT 2 cut(s) 211, 336
TfiI GAWTC 1 cut(s) 264
Tru1I TTAA 1 cut(s) 210
Tru9I TTAA 1 cut(s) 210
TscAI CASTG 1 cut(s) 296
TseFI GTSAC 1 cut(s) 3
Tsp45I GTSAC 1 cut(s) 3
TspDTI ATGAA 1 cut(s) 164
TspRI CASTG 1 cut(s) 296
VneI GTGCAC 1 cut(s) 119
XspI CTAG 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.