Rh7CG311900

Methionine adenosyltransferase 2 subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001020
Physical Location & Seq
Forward (+)
33231254 .. 33235831
4578 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG311900.1

Sequence Viewer

Length: 279 bp
ATGAGTAGGAAGAGAGTTTTGATAGTTGGAGGCACAGGCTATTTGGGACAGCATGTATTGCAAGGCTTTTCAGAGATTCAAGAAACCACTCCTTGTGATCTGGCATTTACCCACCACTCAAGTCCTCCTCCCCAAGCTTTGCTCAATGCATTTCCTAGTGCGATGCCTTTCTCTGTGGATTTGAAGTCTGGCAATGGATTTGAAACCATTTCTCATCTGTTTGGTCCGGTCAGTTCTCACCCCATTAAGCAATTTCTTGTATATGTTGATTGTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RmlD_sub_bind

Protein Analysis

92

Amino Acids

10.0

Weight (kDa)

6.15

Isoelectric Point (pI)

51.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 3 cut(s) 80, 184, 203
AluBI AGCT 1 cut(s) 137
AluI AGCT 1 cut(s) 137
AspS9I GGNCC 1 cut(s) 224
AsuHPI GGTGA 1 cut(s) 230
AvaII GGWCC 1 cut(s) 224
BfaI CTAG 1 cut(s) 156
Bme18I GGWCC 1 cut(s) 224
BmgT120I GGNCC 1 cut(s) 224
BmsI GCATC 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 103
BsaWI WCCGGW 1 cut(s) 226
Bse3DI GCAATG 1 cut(s) 199
BseMI GCAATG 1 cut(s) 199
BseRI GAGGAG 1 cut(s) 117
BsiSI CCGG 1 cut(s) 227
BslFI GGGAC 1 cut(s) 60
BsmFI GGGAC 1 cut(s) 60
Bsp143I GATC 1 cut(s) 97
BsrDI GCAATG 1 cut(s) 199
BssMI GATC 1 cut(s) 97
Bst6I CTCTTC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 58
BstKTI GATC 1 cut(s) 100
BstMBI GATC 1 cut(s) 97
BstMWI GCNNNNNNNGC 1 cut(s) 58
BstNSI RCATGY 1 cut(s) 56
BtgZI GCGATG 1 cut(s) 176
Cfr13I GGNCC 1 cut(s) 224
CviAII CATG 1 cut(s) 53
CviJI RGCY 3 cut(s) 39, 66, 137
CviKI_1 RGCY 3 cut(s) 39, 66, 137
DpnI GATC 1 cut(s) 99
DpnII GATC 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 5
EarI CTCTTC 1 cut(s) 5
Eco47I GGWCC 1 cut(s) 224
EcoT22I ATGCAT 1 cut(s) 151
FaeI CATG 1 cut(s) 56
FaiI YATR 3 cut(s) 54, 262, 264
FaqI GGGAC 1 cut(s) 60
FatI CATG 1 cut(s) 52
FspBI CTAG 1 cut(s) 156
HapII CCGG 1 cut(s) 227
Hin1II CATG 1 cut(s) 56
HindIII AAGCTT 1 cut(s) 135
HinfI GANTC 1 cut(s) 76
HpaII CCGG 1 cut(s) 227
HphI GGTGA 1 cut(s) 230
Hpy188I TCNGA 1 cut(s) 73
Hpy188III TCNNGA 1 cut(s) 80
HpyCH4V TGCA 2 cut(s) 61, 149
HpyF10VI GCNNNNNNNGC 1 cut(s) 58
Hsp92II CATG 1 cut(s) 56
Kzo9I GATC 1 cut(s) 97
LpnPI CCDG 4 cut(s) 21, 86, 174, 240
LweI GCATC 1 cut(s) 153
MaeI CTAG 1 cut(s) 156
MalI GATC 1 cut(s) 99
MboI GATC 1 cut(s) 97
MboII GAAGA 1 cut(s) 22
MluCI AATT 1 cut(s) 251
MmeI TCCRAC 1 cut(s) 7
MnlI CCTC 3 cut(s) 23, 135, 138
Mph1103I ATGCAT 1 cut(s) 151
MseI TTAA 1 cut(s) 246
MspI CCGG 1 cut(s) 227
MwoI GCNNNNNNNGC 1 cut(s) 58
NdeII GATC 1 cut(s) 97
NlaIII CATG 1 cut(s) 56
NsiI ATGCAT 1 cut(s) 151
NspI RCATGY 1 cut(s) 56
PfeI GAWTC 1 cut(s) 76
PspPI GGNCC 1 cut(s) 224
SaqAI TTAA 1 cut(s) 246
Sau3AI GATC 1 cut(s) 97
Sau96I GGNCC 1 cut(s) 224
SetI ASST 1 cut(s) 139
SfaNI GCATC 1 cut(s) 153
SinI GGWCC 1 cut(s) 224
SmlI CTYRAG 1 cut(s) 118
SmoI CTYRAG 1 cut(s) 118
Sse9I AATT 1 cut(s) 251
SspMI CTAG 1 cut(s) 156
TasI AATT 1 cut(s) 251
TfiI GAWTC 1 cut(s) 76
Tru1I TTAA 1 cut(s) 246
Tru9I TTAA 1 cut(s) 246
VpaK11BI GGWCC 1 cut(s) 224
XceI RCATGY 1 cut(s) 56
XspI CTAG 1 cut(s) 156
Zsp2I ATGCAT 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.