AT1G08230

amino acid transporter family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
2583594 .. 2586969
3376 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08230.6

Sequence Viewer

Length: 1356 bp
ATGGGTGGAGAAGAGAGATCAGGAGATGGAGAAAAAAGAGGGGAAGAAGTAGTTGATGCTGGTTCTCTCTTCGTCCTTAAATCCAAAGGGACATGGTGGCACTGCGGATTCCACTTGACGACGTCTATAGTGGCGCCTGCGCTACTGAGTCTACCGTACGCCTTCAAGTTCTTAGGATGGGCTGCCGGGATATCTTGTCTGGTCGGAGGAGCAGCCGTTACTTTCTACTCGTACACTCTTCTTTCTCTTACTCTCGAACACCACGCTTCTCTCGGCAACCGTTACCTCCGCTTCCGTGACATGGCTCATCACATCCTCAGTCCGAAATGGGGAAGGTACTACGTTGGACCAATACAAATGGCGGTGTGCTATGGTGTGGTTATTGCCAATGCGCTCTTGGGAGGGCAATGCCTAAAGGCAATGTACTTGGTAGTGCAGCCAAATGGGGAAATGAAACTCTTTGAGTTTGTGATTATTTTTGGATGCTTACTTTTGGTTTTGGCACAATTCCCATCCTTTCACTCTCTACGATACATCAACTCACTGTCTCTCCTCCTCTGCCTCCTCTACAGTGCTTCTGCCGCTGCTGCATCCATCTACATTGGAAAAGAACCAAATGCACCAGAGAAGGACTATACTATAGTTGGTGATCCAGAAACTAGAGTGTTTGGAATCTTTAATGCTATGGCTATTATTGCTACTACATACGGCAATGGCATTATACCTGAAATTCAGGCAACAATATCGGCACCAGTGAAAGGAAAAATGATGAAAGGGTTGTGTATGTGTTACCTTGTAGTAATAATGACATTTTTCACAGTAGCCATCACAGGATATTGGGCATTCGGTAAAAAAGCCAATGGACTTATCTTCACCAATTTCTTAAATGCCGAGACAAACCATTACTTTGTCCCTACTTGGTTTATTTTTCTCGTCAATCTCTTCACTGTCCTTCAACTTTCGGCCGTTGCTGTGGTATACCTACAACCTATAAACGATATTTTGGAAAGTGTGATCAGCGATCCAACAAAGAAAGAATTCTCTATCCGCAATGTCATCCCTCGACTAGTTGTGCGTTCCCTCTTCGTCGTGATGGCTACAATCGTTGCGGCAATGCTTCCATTTTTTGGAGATGTAAACTCCTTGTTAGGCGCTTTCGGTTTTATACCTCTAGACTTCGTTCTTCCTGTAGTTTTCTTCAACTTTACTTTCAAGCCGTCTAAAAAAAGTTTCATTTTTTGGATCAACACTGTGATCGCCGTGGTTTTTTCGTGTTTAGGGGTGATTGCTATGGTAGCGGCGGTTAGACAGATTATAATAGATGCCAATACGTATAAGTTGTTTGCGGATGTATAA

Protein Analysis

451

Amino Acids

49.69

Weight (kDa)

8.72

Isoelectric Point (pI)

26.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 4 - 320 2.8e-39 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000597)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08230 AT1G08230 AT1G08230 AT1G08230 AT1G08230
fragaria_vesca FvH4_3g30140 FvH4_7g06340 FvH4_7g06350 FvH4_7g06350
malus_domestica MD02G1244800.v1.1 MD03G1133300.v1.1 MD07G1072100.v1.1 MD07G1072300.v1.1 MD11G1155800.v1.1 MD11G1156000.v1.1
prunus_persica Prupe.2G090300_v2.0.a1 Prupe.2G090500_v2.0.a1 Prupe.6G118000_v2.0.a1 Prupe.6G118000_v2.0.a1 Prupe.6G118000_v2.0.a1
pyrus_communis pycom02g21070 pycom03g08970 pycom07g05520
rosa_chinensis RchiOBHm_Chr1g0334311 RchiOBHm_Chr1g0334341 RchiOBHm_Chr1g0334351 RchiOBHm_Chr1g0334371 RchiOBHm_Chr1g0334381 RchiOBHm_Chr1g0334431 RchiOBHm_Chr5g0055491 RchiOBHm_Chr5g0055511
rosa_laevigata RLG00000029454 RLG00000029457 RLG00000029458 RLG00000029459 RLG00000029461 RLG00000034991 RLG00000034993
rosa_multiflora Rmu_sc0001673.1_g000036 Rmu_sc0001673.1_g000040 Rmu_sc0016880.1_g000002 Rmu_ssc0000047.1_g000014 Rmu_ssc0000047.1_g000015 Rmu_ssc0000047.1_g000016 Rmu_ssc0000047.1_g000023
rosa_roxburghii Rroxscaffold_1G00024820 Rroxscaffold_1G00024850 Rroxscaffold_1G00024860 Rroxscaffold_4G00316880 Rroxscaffold_4G00316900
rosa_rugosa Rorug01G0113300.1 Rorug01G0113400 Rorug01G0113500 Rorug05G0293200 Rorug05G0293200 Rorug05G0293400.1
rosa_samantha Rh1AG138200 Rh1AG138300 Rh1AG139000 Rh1BG104900 Rh1CG130400 Rh1CG130500 Rh1CG131000 Rh1DG142700 Rh1DG142800 Rh5AG362800 Rh5AG363000 Rh5BG375000 Rh5BG375200 Rh5CG396900 Rh5CG397100 Rh5DG388300 Rh5DG388400
rosa_wichuraiana Rw0G003720 Rw0G003730 Rw0G003740 Rw1G011440 Rw1G011450 Rw5G034150 Rw5G034170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1316
AatII GACGTC 1 cut(s) 125
AccB1I GGYRCC 2 cut(s) 133, 748
AccB7I CCANNNNNTGG 1 cut(s) 1127
AccI GTMKAC 2 cut(s) 151, 978
AciI CCGC 9 cut(s) 105, 289, 362, 582, 1048, 1109, 1298, 1301, 1346
AclWI GGATC 3 cut(s) 644, 1016, 1250
AcoI YGGCCR 1 cut(s) 963
AcsI RAATTY 2 cut(s) 729, 1037
AcyI GRCGYC 2 cut(s) 122, 134
AfaI GTAC 4 cut(s) 158, 233, 338, 425
AfiI CCNNNNNNNGG 4 cut(s) 301, 329, 758, 1127
AgsI TTSAA 4 cut(s) 166, 956, 1201, 1213
AhlI ACTAGT 1 cut(s) 1066
Alw26I GTCTC 2 cut(s) 552, 887
AlwI GGATC 3 cut(s) 644, 1016, 1250
AoxI GGCC 1 cut(s) 963
ApeKI GCWGC 5 cut(s) 182, 212, 436, 584, 587
ApoI RAATTY 2 cut(s) 729, 1037
Asp700I GAANNNNTTC 1 cut(s) 1037
AspLEI GCGC 4 cut(s) 136, 142, 394, 1154
AspS9I GGNCC 1 cut(s) 347
AsuC2I CCSGG 1 cut(s) 187
AsuHPI GGTGA 3 cut(s) 659, 865, 1294
AvaII GGWCC 1 cut(s) 347
BanI GGYRCC 2 cut(s) 133, 748
BbvI GCAGC 5 cut(s) 169, 224, 448, 571, 574
BccI CCATC 6 cut(s) 20, 171, 520, 602, 833, 1087
BceAI ACGGC 5 cut(s) 200, 724, 950, 1201, 1244
BcgI CGANNNNNNTGC 2 cut(s) 726, 760
BclI TGATCA 1 cut(s) 1014
BcnI CCSGG 1 cut(s) 187
BcoDI GTCTC 2 cut(s) 552, 887
BcuI ACTAGT 1 cut(s) 1066
BfaI CTAG 3 cut(s) 660, 1067, 1172
BfmI CTRYAG 4 cut(s) 126, 568, 639, 1188
BfoI RGCGCY 2 cut(s) 137, 1155
BisI GCNGC 8 cut(s) 183, 213, 437, 582, 585, 588, 1110, 1299
BlsI GCNGC 8 cut(s) 184, 214, 438, 583, 586, 589, 1111, 1300
Bme1390I CCNGG 1 cut(s) 187
Bme18I GGWCC 1 cut(s) 347
BmgT120I GGNCC 1 cut(s) 347
BmiI GGNNCC 2 cut(s) 135, 750
BmrFI CCNGG 1 cut(s) 187
BmsI GCATC 4 cut(s) 46, 473, 599, 1312
BpuMI CCSGG 1 cut(s) 187
BsaAI YACGTR 1 cut(s) 1332
BsaHI GRCGYC 2 cut(s) 122, 134
BsaJI CCNNGG 1 cut(s) 1260
BsaXI ACNNNNNCTCC 4 cut(s) 201, 231, 534, 564
Bsc4I CCNNNNNNNGG 4 cut(s) 301, 329, 758, 1127
Bse1I ACTGG 1 cut(s) 752
Bse3DI GCAATG 5 cut(s) 413, 426, 718, 1057, 1119
BseDI CCNNGG 1 cut(s) 1260
BseGI GGATG 7 cut(s) 182, 312, 488, 512, 590, 1056, 1354
BseLI CCNNNNNNNGG 4 cut(s) 301, 329, 758, 1127
BseMI GCAATG 5 cut(s) 413, 426, 718, 1057, 1119
BseMII CTCAG 2 cut(s) 137, 331
BseNI ACTGG 1 cut(s) 752
BseRI GAGGAG 4 cut(s) 222, 542, 545, 554
BseX3I CGGCCG 1 cut(s) 963
BseXI GCAGC 5 cut(s) 169, 224, 448, 571, 574
BsgI GTGCAG 1 cut(s) 455
Bsh1285I CGRYCG 1 cut(s) 966
BshFI GGCC 1 cut(s) 965
BshNI GGYRCC 2 cut(s) 133, 748
BsiEI CGRYCG 1 cut(s) 966
BsiSI CCGG 1 cut(s) 186
BsiWI CGTACG 1 cut(s) 156
BslFI GGGAC 2 cut(s) 103, 896
BslI CCNNNNNNNGG 4 cut(s) 301, 329, 758, 1127
BsmAI GTCTC 2 cut(s) 552, 887
BsmFI GGGAC 2 cut(s) 103, 896
BsmI GAATGC 1 cut(s) 842
BsnI GGCC 1 cut(s) 965
Bsp143I GATC 6 cut(s) 17, 649, 1014, 1021, 1242, 1254
BspACI CCGC 9 cut(s) 105, 289, 362, 582, 1048, 1109, 1298, 1301, 1346
BspANI GGCC 1 cut(s) 965
BspCNI CTCAG 2 cut(s) 138, 330
BspLI GGNNCC 2 cut(s) 135, 750
BspPI GGATC 3 cut(s) 644, 1016, 1250
BspT107I GGYRCC 2 cut(s) 133, 748
BsrDI GCAATG 5 cut(s) 413, 426, 718, 1057, 1119
BsrI ACTGG 1 cut(s) 752
BssECI CCNNGG 1 cut(s) 1260
BssMI GATC 6 cut(s) 17, 649, 1014, 1021, 1242, 1254
BssNAI GTATAC 1 cut(s) 979
BssNI GRCGYC 2 cut(s) 122, 134
Bst1107I GTATAC 1 cut(s) 979
Bst4CI ACNGT 7 cut(s) 156, 281, 546, 572, 820, 949, 1252
Bst6I CTCTTC 5 cut(s) 6, 74, 243, 947, 1088
BstACI GRCGYC 2 cut(s) 122, 134
BstBAI YACGTR 1 cut(s) 1332
BstC8I GCNNGC 1 cut(s) 138
BstDEI CTNAG 3 cut(s) 146, 172, 317
BstDSI CCRYGG 1 cut(s) 1260
BstF5I GGATG 7 cut(s) 182, 312, 488, 512, 590, 1056, 1354
BstH2I RGCGCY 2 cut(s) 137, 1155
BstHHI GCGC 4 cut(s) 136, 142, 394, 1154
BstKTI GATC 6 cut(s) 20, 652, 1017, 1024, 1245, 1257
BstMAI GTCTC 2 cut(s) 552, 887
BstMBI GATC 6 cut(s) 17, 649, 1014, 1021, 1242, 1254
BstMCI CGRYCG 1 cut(s) 966
BstMWI GCNNNNNNNGC 4 cut(s) 581, 587, 695, 1295
BstSCI CCNGG 1 cut(s) 185
BstSFI CTRYAG 4 cut(s) 126, 568, 639, 1188
BstSNI TACGTA 1 cut(s) 1332
BstV1I GCAGC 5 cut(s) 169, 224, 448, 571, 574
BstZ17I GTATAC 1 cut(s) 979
BstZI CGGCCG 1 cut(s) 963
BsuRI GGCC 1 cut(s) 965
BtgI CCRYGG 1 cut(s) 1260
BtsCI GGATG 7 cut(s) 182, 312, 488, 512, 590, 1056, 1354
BtsI GCAGTG 1 cut(s) 100
BtsIMutI CAGTG 6 cut(s) 100, 542, 577, 759, 945, 1248
Cac8I GCNNGC 1 cut(s) 138
CfoI GCGC 4 cut(s) 136, 142, 394, 1154
Cfr13I GGNCC 1 cut(s) 347
Csp6I GTAC 4 cut(s) 157, 232, 337, 424
CviAII CATG 2 cut(s) 93, 301
CviQI GTAC 4 cut(s) 157, 232, 337, 424
DdeI CTNAG 3 cut(s) 146, 172, 317
DinI GGCGCC 1 cut(s) 135
DpnI GATC 6 cut(s) 19, 651, 1016, 1023, 1244, 1256
DpnII GATC 6 cut(s) 17, 649, 1014, 1021, 1242, 1254
EaeI YGGCCR 1 cut(s) 963
EagI CGGCCG 1 cut(s) 963
Eam1104I CTCTTC 5 cut(s) 6, 74, 243, 947, 1088
EarI CTCTTC 5 cut(s) 6, 74, 243, 947, 1088
EclXI CGGCCG 1 cut(s) 963
Eco105I TACGTA 1 cut(s) 1332
Eco32I GATATC 1 cut(s) 192
Eco47I GGWCC 1 cut(s) 347
Eco52I CGGCCG 1 cut(s) 963
EcoRI GAATTC 1 cut(s) 1037
EcoRV GATATC 1 cut(s) 192
EgeI GGCGCC 1 cut(s) 135
EheI GGCGCC 1 cut(s) 135
FaeI CATG 2 cut(s) 96, 304
FaqI GGGAC 2 cut(s) 103, 896
FatI CATG 2 cut(s) 92, 300
FbaI TGATCA 1 cut(s) 1014
FblI GTMKAC 2 cut(s) 151, 978
Fnu4HI GCNGC 8 cut(s) 183, 213, 437, 582, 585, 588, 1110, 1299
FokI GGATG 6 cut(s) 189, 299, 495, 499, 577, 1043
Fsp4HI GCNGC 8 cut(s) 183, 213, 437, 582, 585, 588, 1110, 1299
FspBI CTAG 3 cut(s) 660, 1067, 1172
GlaI GCGC 4 cut(s) 135, 141, 393, 1153
GluI GCNGC 8 cut(s) 183, 213, 437, 582, 585, 588, 1110, 1299
HaeII RGCGCY 2 cut(s) 137, 1155
HaeIII GGCC 1 cut(s) 965
HapII CCGG 1 cut(s) 186
HhaI GCGC 4 cut(s) 136, 142, 394, 1154
Hin1I GRCGYC 2 cut(s) 122, 134
Hin1II CATG 2 cut(s) 96, 304
Hin6I GCGC 4 cut(s) 134, 140, 392, 1152
HinP1I GCGC 4 cut(s) 134, 140, 392, 1152
HinfI GANTC 3 cut(s) 108, 148, 672
HpaII CCGG 1 cut(s) 186
HphI GGTGA 3 cut(s) 659, 865, 1294
Hpy166II GTNNAC 4 cut(s) 152, 234, 979, 1138
Hpy188I TCNGA 2 cut(s) 206, 324
Hpy188III TCNNGA 5 cut(s) 21, 254, 653, 1090, 1172
Hpy8I GTNNAC 4 cut(s) 152, 234, 979, 1138
Hpy99I CGWCG 2 cut(s) 124, 1091
HpyAV CCTTC 4 cut(s) 172, 327, 622, 962
HpyCH4III ACNGT 7 cut(s) 156, 281, 546, 572, 820, 949, 1252
HpyCH4IV ACGT 3 cut(s) 122, 342, 1331
HpyCH4V TGCA 3 cut(s) 436, 590, 620
HpyF10VI GCNNNNNNNGC 4 cut(s) 581, 587, 695, 1295
HpyF3I CTNAG 3 cut(s) 146, 172, 317
HpySE526I ACGT 3 cut(s) 122, 342, 1331
Hsp92I GRCGYC 2 cut(s) 122, 134
Hsp92II CATG 2 cut(s) 96, 304
HspAI GCGC 4 cut(s) 134, 140, 392, 1152
KasI GGCGCC 1 cut(s) 133
Ksp22I TGATCA 1 cut(s) 1014
Kzo9I GATC 6 cut(s) 17, 649, 1014, 1021, 1242, 1254
LmnI GCTCC 1 cut(s) 209
Lsp1109I GCAGC 5 cut(s) 169, 224, 448, 571, 574
LweI GCATC 4 cut(s) 46, 473, 599, 1312
MaeI CTAG 3 cut(s) 660, 1067, 1172
MaeII ACGT 3 cut(s) 122, 342, 1331
MaeIII GTNAC 4 cut(s) 217, 281, 296, 788
MalI GATC 6 cut(s) 19, 651, 1016, 1023, 1244, 1256
MboI GATC 6 cut(s) 17, 649, 1014, 1021, 1242, 1254
MboII GAAGA 9 cut(s) 23, 56, 61, 230, 862, 934, 1075, 1175, 1189
MluCI AATT 4 cut(s) 506, 729, 877, 1037
Mly113I GGCGCC 1 cut(s) 134
MlyI GAGTC 1 cut(s) 157
MmeI TCCRAC 3 cut(s) 184, 325, 1049
MroXI GAANNNNTTC 1 cut(s) 1037
MseI TTAA 3 cut(s) 78, 678, 884
MspA1I CMGCKG 1 cut(s) 584
MspI CCGG 1 cut(s) 186
MspR9I CCNGG 1 cut(s) 187
Mva1269I GAATGC 1 cut(s) 842
MwoI GCNNNNNNNGC 4 cut(s) 581, 587, 695, 1295
NarI GGCGCC 1 cut(s) 134
NciI CCSGG 1 cut(s) 187
NdeII GATC 6 cut(s) 17, 649, 1014, 1021, 1242, 1254
NlaIII CATG 2 cut(s) 96, 304
NlaIV GGNNCC 2 cut(s) 135, 750
NmeAIII GCCGAG 2 cut(s) 252, 916
NmuCI GTSAC 1 cut(s) 296
PctI GAATGC 1 cut(s) 842
PdmI GAANNNNTTC 1 cut(s) 1037
PfeI GAWTC 2 cut(s) 108, 672
Pfl23II CGTACG 1 cut(s) 156
PflFI GACNNNGTC 1 cut(s) 121
PflMI CCANNNNNTGG 1 cut(s) 1127
PkrI GCNGC 8 cut(s) 184, 214, 438, 583, 586, 589, 1111, 1300
PleI GAGTC 1 cut(s) 156
PluTI GGCGCC 1 cut(s) 137
PpsI GAGTC 1 cut(s) 156
Ppu21I YACGTR 1 cut(s) 1332
PsiI TTATAA 1 cut(s) 1316
PspLI CGTACG 1 cut(s) 156
PspN4I GGNNCC 2 cut(s) 135, 750
PspPI GGNCC 1 cut(s) 347
PsyI GACNNNGTC 1 cut(s) 121
RsaI GTAC 4 cut(s) 158, 233, 338, 425
RsaNI GTAC 4 cut(s) 157, 232, 337, 424
SaqAI TTAA 3 cut(s) 78, 678, 884
SatI GCNGC 8 cut(s) 183, 213, 437, 582, 585, 588, 1110, 1299
Sau3AI GATC 6 cut(s) 17, 649, 1014, 1021, 1242, 1254
Sau96I GGNCC 1 cut(s) 347
SchI GAGTC 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 187
SfaNI GCATC 4 cut(s) 46, 473, 599, 1312
SfcI CTRYAG 4 cut(s) 126, 568, 639, 1188
SfoI GGCGCC 1 cut(s) 135
SinI GGWCC 1 cut(s) 347
SnaBI TACGTA 1 cut(s) 1332
SpeI ACTAGT 1 cut(s) 1066
Sse9I AATT 4 cut(s) 506, 729, 877, 1037
SsiI CCGC 9 cut(s) 105, 289, 362, 582, 1048, 1109, 1298, 1301, 1346
SspDI GGCGCC 1 cut(s) 133
SspMI CTAG 3 cut(s) 660, 1067, 1172
StyD4I CCNGG 1 cut(s) 185
TaaI ACNGT 7 cut(s) 156, 281, 546, 572, 820, 949, 1252
TaiI ACGT 3 cut(s) 125, 345, 1334
TaqI TCGA 2 cut(s) 255, 1063
TasI AATT 4 cut(s) 506, 729, 877, 1037
TatI WGTACW 1 cut(s) 423
TauI GCSGC 3 cut(s) 584, 1112, 1301
TfiI GAWTC 2 cut(s) 108, 672
Tru1I TTAA 3 cut(s) 78, 678, 884
Tru9I TTAA 3 cut(s) 78, 678, 884
TscAI CASTG 6 cut(s) 107, 549, 577, 759, 952, 1255
TseFI GTSAC 1 cut(s) 296
TseI GCWGC 5 cut(s) 182, 212, 436, 584, 587
Tsp45I GTSAC 1 cut(s) 296
TspDTI ATGAA 3 cut(s) 467, 785, 1222
TspGWI ACGGA 1 cut(s) 284
TspRI CASTG 6 cut(s) 107, 549, 577, 759, 952, 1255
Tth111I GACNNNGTC 1 cut(s) 121
Van91I CCANNNNNTGG 1 cut(s) 1127
VpaK11BI GGWCC 1 cut(s) 347
XapI RAATTY 2 cut(s) 729, 1037
XbaI TCTAGA 1 cut(s) 1171
XcmI CCANNNNNNNNNTGG 1 cut(s) 394
XmiI GTMKAC 2 cut(s) 151, 978
XmnI GAANNNNTTC 1 cut(s) 1037
XspI CTAG 3 cut(s) 660, 1067, 1172
ZraI GACGTC 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.