FvH4_7g06350

GABA transporter 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000597
Physical Location & Seq
Forward (+)
6409938 .. 6414382
4445 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g06350.t1

Sequence Viewer

Length: 1527 bp
ATGAGTGTGAAGTCCGGAGTTGTATATAAGTGTGGCACTGAACCTCTTTCTTTTCTCTACTCTGTATATATATATATATATCAAGTCTATAGTCGATCTTCCAAGAACACAAGGAGAGAGAGAGAGAGAGAGATGGGAACTGTGGCTGCTCCATACAAGATGGAATTAGCATCTGAAGTTGATCAGAAACAAAAGGGTGTCGTGGCCGCCAGCAGCCCTCCGAAACAGCTCGACGCCGGAGCTCTCTTCGTTCTCAAGTCGCAAGGGTCATGGTTACATGTTGGGTACCACTTGACGACATCAATAGTGGCTCCGGTGCTTCTAAGTCTTCCGTTTGCGATGGCCTTGATCGGCTGGGTTGGGGGAGTCATCTGTGTAGCCTTGGCAGCTTTGGTCACCTTCTACTCCTACACTCTTCTCTCTTTAGTTCTCGAGCACCAAGAGAAGCTTGGCCATCGTCAACTTCGCTTTCGAGACATGGCCAGAGACATCTTAGGTCCTGCTTGGGGTAAATATTTTGTTGGCCCTCTGCAGTTTTGGATATGCTATGGTGCAGTCATCGCTTGCACATTACTTGGTGGGCAGAGCCTTAAGTTTATTTACTTGCTCTCCAATCCAGATGGAACAATGAAGCTGTACCAGTTTATTGTTATGTTCGGAGGCGTCACACTCTTTCTGGCTCAAATGCCATCCTTCCATTCCTTAAGGCATATTAACCTCGTTTCTCTTATCCTTTGTCTTGCATACAGCTCCTGCGTCACTGCTGGTTGCATATACATTGGACATACGAACAATGCTCCTATAAAGGACTATTCCATAAAAGGAAGTACAAAAGATCGGTATTTTGGTATCTTCAATGGCATCTCAATCATCGCTACCACATACGCAAGTGGAATAATTCCGGAAATACAGGCAACTTTGGCACCTCCGGTAAAAGGCAAGATGTTCAAAGGGCTATGTGTGTGCTACAGTGTTATAGTGACAACCTACTTCAGTGTGGCAATGTCTGGATATTGGGCGTTTGGCAACCAAGCTATGGGAACCGTTCTATCCAATTTTATGGGTGTTGACAAGCCTTTACTTCCTACCTGGTTTTTGCTCATGACCAATGTCTTCACTCTTCTGCAGGTCTTGGCTGTCACAGTGGTTTACTTGCAACCAACAAATGAAGTGTTTGAGAAGAAATTTGCAGACCCAAAAATGGATCAATTCTCCGTCCGTAATGTGGTGCCGCGATTGATTTTCCGGTCACTCACGGTAGTGGTAGCTACATTTTTTGCTGCGATGTTACCTTTCTTTGGAGATATCATGGCATTGTTCGGGGCATTTGGATGCATTCCTCTAGATTTCATTTTGCCAATGATATTCTACAATGTGAGTTTCAAGCCCTCTAAGCAGAGCCTCATCTTTTGGGTTAACACATTGATAGCAGGAGTATCCTTCTTGTTAGTCGGGGTAGGCGCTGTAGCATCGGTTAGGCAAATTTTCCTTGATGCTAAAACATATCGCCTTTTTGCTAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

509

Amino Acids

56.25

Weight (kDa)

9.35

Isoelectric Point (pI)

30.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 88 - 490 8.3e-67 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000597)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08230 AT1G08230 AT1G08230 AT1G08230 AT1G08230
fragaria_vesca FvH4_3g30140 FvH4_7g06340 FvH4_7g06350 FvH4_7g06350
malus_domestica MD02G1244800.v1.1 MD03G1133300.v1.1 MD07G1072100.v1.1 MD07G1072300.v1.1 MD11G1155800.v1.1 MD11G1156000.v1.1
prunus_persica Prupe.2G090300_v2.0.a1 Prupe.2G090500_v2.0.a1 Prupe.6G118000_v2.0.a1 Prupe.6G118000_v2.0.a1 Prupe.6G118000_v2.0.a1
pyrus_communis pycom02g21070 pycom03g08970 pycom07g05520
rosa_chinensis RchiOBHm_Chr1g0334311 RchiOBHm_Chr1g0334341 RchiOBHm_Chr1g0334351 RchiOBHm_Chr1g0334371 RchiOBHm_Chr1g0334381 RchiOBHm_Chr1g0334431 RchiOBHm_Chr5g0055491 RchiOBHm_Chr5g0055511
rosa_laevigata RLG00000029454 RLG00000029457 RLG00000029458 RLG00000029459 RLG00000029461 RLG00000034991 RLG00000034993
rosa_multiflora Rmu_sc0001673.1_g000036 Rmu_sc0001673.1_g000040 Rmu_sc0016880.1_g000002 Rmu_ssc0000047.1_g000014 Rmu_ssc0000047.1_g000015 Rmu_ssc0000047.1_g000016 Rmu_ssc0000047.1_g000023
rosa_roxburghii Rroxscaffold_1G00024820 Rroxscaffold_1G00024850 Rroxscaffold_1G00024860 Rroxscaffold_4G00316880 Rroxscaffold_4G00316900
rosa_rugosa Rorug01G0113300.1 Rorug01G0113400 Rorug01G0113500 Rorug05G0293200 Rorug05G0293200 Rorug05G0293400.1
rosa_samantha Rh1AG138200 Rh1AG138300 Rh1AG139000 Rh1BG104900 Rh1CG130400 Rh1CG130500 Rh1CG131000 Rh1DG142700 Rh1DG142800 Rh5AG362800 Rh5AG363000 Rh5BG375000 Rh5BG375200 Rh5CG396900 Rh5CG397100 Rh5DG388300 Rh5DG388400
rosa_wichuraiana Rw0G003720 Rw0G003730 Rw0G003740 Rw1G011440 Rw1G011450 Rw5G034150 Rw5G034170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1117
Acc65I GGTACC 1 cut(s) 285
AccB1I GGYRCC 3 cut(s) 285, 922, 1228
AccB7I CCANNNNNTGG 1 cut(s) 1036
AccII CGCG 1 cut(s) 1234
AccIII TCCGGA 2 cut(s) 14, 901
AciI CCGC 2 cut(s) 207, 1232
AclWI GGATC 1 cut(s) 1212
AcoI YGGCCR 3 cut(s) 204, 451, 480
AcsI RAATTY 2 cut(s) 1184, 1482
AcuI CTGAAG 2 cut(s) 195, 976
AcyI GRCGYC 2 cut(s) 234, 663
AfaI GTAC 3 cut(s) 287, 638, 829
AfiI CCNNNNNNNGG 6 cut(s) 506, 935, 1036, 1201, 1225, 1298
AflII CTTAAG 2 cut(s) 590, 703
AflIII ACRYGT 2 cut(s) 277, 1521
AgsI TTSAA 3 cut(s) 856, 949, 1384
AjnI CCWGG 1 cut(s) 1088
AleI CACNNNNGTG 1 cut(s) 1259
AluBI AGCT 8 cut(s) 229, 242, 389, 448, 634, 750, 1034, 1268
AluI AGCT 8 cut(s) 229, 242, 389, 448, 634, 750, 1034, 1268
Alw21I GWGCWC 2 cut(s) 244, 438
Alw26I GTCTC 2 cut(s) 468, 480
AlwI GGATC 1 cut(s) 1212
AlwNI CAGNNNCTG 1 cut(s) 753
Ama87I CYCGRG 1 cut(s) 431
Aor13HI TCCGGA 2 cut(s) 14, 901
AoxI GGCC 5 cut(s) 204, 342, 451, 480, 523
ApeKI GCWGC 4 cut(s) 146, 213, 386, 1280
ApoI RAATTY 2 cut(s) 1184, 1482
Asp718I GGTACC 1 cut(s) 285
AspLEI GCGC 1 cut(s) 1463
AspS9I GGNCC 2 cut(s) 497, 524
AsuHPI GGTGA 1 cut(s) 388
AvaI CYCGRG 1 cut(s) 431
AvaII GGWCC 1 cut(s) 497
BalI TGGCCA 2 cut(s) 453, 482
BanI GGYRCC 3 cut(s) 285, 922, 1228
BanII GRGCYC 1 cut(s) 244
BbsI GAAGAC 2 cut(s) 320, 1105
Bbv12I GWGCWC 2 cut(s) 244, 438
BbvI GCAGC 4 cut(s) 133, 225, 398, 1267
BccI CCATC 6 cut(s) 127, 154, 334, 462, 614, 697
BciT130I CCWGG 1 cut(s) 1090
BciVI GTATCC 1 cut(s) 1447
BclI TGATCA 1 cut(s) 181
BcoDI GTCTC 2 cut(s) 468, 480
BfaI CTAG 1 cut(s) 1343
BfmI CTRYAG 5 cut(s) 88, 530, 967, 1124, 1464
BfoI RGCGCY 1 cut(s) 1464
BfrI CTTAAG 2 cut(s) 590, 703
BfuAI ACCTGC 1 cut(s) 1117
BfuI GTATCC 1 cut(s) 1447
BisI GCNGC 6 cut(s) 147, 207, 214, 387, 1232, 1281
BlsI GCNGC 6 cut(s) 148, 208, 215, 388, 1233, 1282
Bme1390I CCNGG 1 cut(s) 1090
Bme18I GGWCC 1 cut(s) 497
BmeT110I CYCGRG 1 cut(s) 431
BmgT120I GGNCC 2 cut(s) 497, 524
BmiI GGNNCC 5 cut(s) 287, 312, 924, 1042, 1230
BmrFI CCNGG 1 cut(s) 1090
BmsI GCATC 5 cut(s) 179, 870, 1322, 1478, 1483
BoxI GACNNNNGTC 1 cut(s) 1109
BpiI GAAGAC 2 cut(s) 320, 1105
BpuEI CTTGAG 1 cut(s) 239
BsaHI GRCGYC 2 cut(s) 234, 663
BsaJI CCNNGG 1 cut(s) 381
BsaWI WCCGGW 5 cut(s) 14, 313, 901, 928, 1245
BsaXI ACNNNNNCTCC 2 cut(s) 593, 623
Bsc4I CCNNNNNNNGG 6 cut(s) 506, 935, 1036, 1201, 1225, 1298
Bse1I ACTGG 1 cut(s) 640
Bse3DI GCAATG 1 cut(s) 1008
BseAI TCCGGA 2 cut(s) 14, 901
BseBI CCWGG 1 cut(s) 1090
BseDI CCNNGG 1 cut(s) 381
BseGI GGATG 2 cut(s) 689, 1337
BseLI CCNNNNNNNGG 6 cut(s) 506, 935, 1036, 1201, 1225, 1298
BseMI GCAATG 1 cut(s) 1008
BseNI ACTGG 1 cut(s) 640
BseXI GCAGC 4 cut(s) 133, 225, 398, 1267
BseYI CCCAGC 1 cut(s) 354
BsgI GTGCAG 1 cut(s) 573
Bsh1236I CGCG 1 cut(s) 1234
BshFI GGCC 5 cut(s) 206, 344, 453, 482, 525
BshNI GGYRCC 3 cut(s) 285, 922, 1228
BsiHKAI GWGCWC 2 cut(s) 244, 438
BsiHKCI CYCGRG 1 cut(s) 431
BsiSI CCGG 6 cut(s) 15, 237, 314, 902, 929, 1246
BslI CCNNNNNNNGG 6 cut(s) 506, 935, 1036, 1201, 1225, 1298
BsmAI GTCTC 2 cut(s) 468, 480
BsmI GAATGC 1 cut(s) 1335
BsnI GGCC 5 cut(s) 206, 344, 453, 482, 525
BsoBI CYCGRG 1 cut(s) 431
Bsp1286I GDGCHC 2 cut(s) 244, 438
Bsp13I TCCGGA 2 cut(s) 14, 901
Bsp143I GATC 5 cut(s) 95, 181, 348, 835, 1204
BspACI CCGC 2 cut(s) 207, 1232
BspANI GGCC 5 cut(s) 206, 344, 453, 482, 525
BspEI TCCGGA 2 cut(s) 14, 901
BspFNI CGCG 1 cut(s) 1234
BspHI TCATGA 1 cut(s) 1101
BspLI GGNNCC 5 cut(s) 287, 312, 924, 1042, 1230
BspMAI CTGCAG 2 cut(s) 534, 1128
BspMI ACCTGC 1 cut(s) 1117
BspPI GGATC 1 cut(s) 1212
BspT107I GGYRCC 3 cut(s) 285, 922, 1228
BspTI CTTAAG 2 cut(s) 590, 703
BsrDI GCAATG 1 cut(s) 1008
BsrI ACTGG 1 cut(s) 640
BssECI CCNNGG 1 cut(s) 381
BssMI GATC 5 cut(s) 95, 181, 348, 835, 1204
BssNI GRCGYC 2 cut(s) 234, 663
BssT1I CCWWGG 1 cut(s) 381
Bst2UI CCWGG 1 cut(s) 1090
Bst4CI ACNGT 5 cut(s) 142, 971, 1045, 1144, 1258
Bst6I CTCTTC 3 cut(s) 251, 420, 1125
BstACI GRCGYC 2 cut(s) 234, 663
BstAFI CTTAAG 2 cut(s) 590, 703
BstC8I GCNNGC 2 cut(s) 211, 565
BstDEI CTNAG 3 cut(s) 323, 493, 1392
BstEII GGTNACC 1 cut(s) 394
BstF5I GGATG 2 cut(s) 689, 1337
BstFNI CGCG 1 cut(s) 1234
BstH2I RGCGCY 1 cut(s) 1464
BstHHI GCGC 1 cut(s) 1463
BstKTI GATC 5 cut(s) 98, 184, 351, 838, 1207
BstMAI GTCTC 2 cut(s) 468, 480
BstMBI GATC 5 cut(s) 95, 181, 348, 835, 1204
BstMWI GCNNNNNNNGC 4 cut(s) 386, 560, 920, 1393
BstNI CCWGG 1 cut(s) 1090
BstNSI RCATGY 2 cut(s) 281, 1525
BstPAI GACNNNNGTC 1 cut(s) 1109
BstPI GGTNACC 1 cut(s) 394
BstSCI CCNGG 1 cut(s) 1088
BstSFI CTRYAG 5 cut(s) 88, 530, 967, 1124, 1464
BstUI CGCG 1 cut(s) 1234
BstV1I GCAGC 4 cut(s) 133, 225, 398, 1267
BstV2I GAAGAC 2 cut(s) 320, 1105
BstXI CCANNNNNNTGG 1 cut(s) 1060
BsuI GTATCC 1 cut(s) 1447
BsuRI GGCC 5 cut(s) 206, 344, 453, 482, 525
BtgZI GCGATG 4 cut(s) 353, 544, 856, 1298
BtsCI GGATG 2 cut(s) 689, 1337
BtsI GCAGTG 1 cut(s) 759
BtsIMutI CAGTG 5 cut(s) 36, 759, 976, 1000, 1149
BveI ACCTGC 1 cut(s) 1117
Cac8I GCNNGC 2 cut(s) 211, 565
CaiI CAGNNNCTG 1 cut(s) 753
CciI TCATGA 1 cut(s) 1101
CfoI GCGC 1 cut(s) 1463
Cfr13I GGNCC 2 cut(s) 497, 524
CseI GACGC 3 cut(s) 242, 652, 745
CsiI ACCWGGT 1 cut(s) 1088
Csp6I GTAC 3 cut(s) 286, 637, 828
CviAII CATG 6 cut(s) 270, 278, 478, 1102, 1309, 1522
CviQI GTAC 3 cut(s) 286, 637, 828
DdeI CTNAG 3 cut(s) 323, 493, 1392
DpnI GATC 5 cut(s) 97, 183, 350, 837, 1206
DpnII GATC 5 cut(s) 95, 181, 348, 835, 1204
EaeI YGGCCR 3 cut(s) 204, 451, 480
Eam1104I CTCTTC 3 cut(s) 251, 420, 1125
EarI CTCTTC 3 cut(s) 251, 420, 1125
Ecl136II GAGCTC 1 cut(s) 242
Eco130I CCWWGG 1 cut(s) 381
Eco24I GRGCYC 1 cut(s) 244
Eco32I GATATC 1 cut(s) 1306
Eco47I GGWCC 1 cut(s) 497
Eco53kI GAGCTC 1 cut(s) 242
Eco57I CTGAAG 2 cut(s) 195, 976
Eco88I CYCGRG 1 cut(s) 431
Eco91I GGTNACC 1 cut(s) 394
EcoICRI GAGCTC 1 cut(s) 242
EcoO109I RGGNCCY 1 cut(s) 497
EcoO65I GGTNACC 1 cut(s) 394
EcoRII CCWGG 1 cut(s) 1088
EcoRV GATATC 1 cut(s) 1306
EcoT14I CCWWGG 1 cut(s) 381
EcoT22I ATGCAT 1 cut(s) 1337
EcoT38I GRGCYC 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 381
FaeI CATG 6 cut(s) 273, 281, 481, 1105, 1312, 1525
FalI AAGNNNNNCTT 2 cut(s) 432, 464
FatI CATG 6 cut(s) 269, 277, 477, 1101, 1308, 1521
FbaI TGATCA 1 cut(s) 181
Fnu4HI GCNGC 6 cut(s) 147, 207, 214, 387, 1232, 1281
FokI GGATG 2 cut(s) 676, 1344
FriOI GRGCYC 1 cut(s) 244
Fsp4HI GCNGC 6 cut(s) 147, 207, 214, 387, 1232, 1281
FspBI CTAG 1 cut(s) 1343
GlaI GCGC 1 cut(s) 1462
GluI GCNGC 6 cut(s) 147, 207, 214, 387, 1232, 1281
GsaI CCCAGC 1 cut(s) 358
HaeII RGCGCY 1 cut(s) 1464
HaeIII GGCC 5 cut(s) 206, 344, 453, 482, 525
HapII CCGG 6 cut(s) 15, 237, 314, 902, 929, 1246
HgaI GACGC 3 cut(s) 242, 652, 745
HhaI GCGC 1 cut(s) 1463
Hin1I GRCGYC 2 cut(s) 234, 663
Hin1II CATG 6 cut(s) 273, 281, 481, 1105, 1312, 1525
Hin6I GCGC 1 cut(s) 1461
HinP1I GCGC 1 cut(s) 1461
HincII GTYRAC 3 cut(s) 461, 1069, 1417
HindII GTYRAC 3 cut(s) 461, 1069, 1417
HindIII AAGCTT 1 cut(s) 446
HinfI GANTC 1 cut(s) 366
HpaI GTTAAC 1 cut(s) 1417
HpaII CCGG 6 cut(s) 15, 237, 314, 902, 929, 1246
HphI GGTGA 1 cut(s) 388
Hpy166II GTNNAC 4 cut(s) 461, 1069, 1150, 1417
Hpy188I TCNGA 4 cut(s) 175, 186, 222, 659
Hpy188III TCNNGA 8 cut(s) 15, 431, 473, 617, 902, 1008, 1102, 1343
Hpy8I GTNNAC 4 cut(s) 461, 1069, 1150, 1417
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 3 cut(s) 409, 703, 1450
HpyCH4III ACNGT 5 cut(s) 142, 971, 1045, 1144, 1258
HpyCH4V TGCA 9 cut(s) 532, 554, 567, 743, 771, 1126, 1156, 1190, 1335
HpyF10VI GCNNNNNNNGC 4 cut(s) 386, 560, 920, 1393
HpyF3I CTNAG 3 cut(s) 323, 493, 1392
Hsp92I GRCGYC 2 cut(s) 234, 663
Hsp92II CATG 6 cut(s) 273, 281, 481, 1105, 1312, 1525
HspAI GCGC 1 cut(s) 1461
Kpn2I TCCGGA 2 cut(s) 14, 901
KpnI GGTACC 1 cut(s) 289
Ksp22I TGATCA 1 cut(s) 181
KspAI GTTAAC 1 cut(s) 1417
Kzo9I GATC 5 cut(s) 95, 181, 348, 835, 1204
LmnI GCTCC 5 cut(s) 154, 239, 316, 755, 802
Lsp1109I GCAGC 4 cut(s) 133, 225, 398, 1267
LweI GCATC 5 cut(s) 179, 870, 1322, 1478, 1483
MabI ACCWGGT 1 cut(s) 1088
MaeI CTAG 1 cut(s) 1343
MaeIII GTNAC 8 cut(s) 273, 394, 664, 757, 979, 1138, 1248, 1287
MalI GATC 5 cut(s) 97, 183, 350, 837, 1206
MboI GATC 5 cut(s) 95, 181, 348, 835, 1204
MboII GAAGA 8 cut(s) 90, 238, 320, 407, 844, 1105, 1112, 1192
MhlI GDGCHC 2 cut(s) 244, 438
MlsI TGGCCA 2 cut(s) 453, 482
MluCI AATT 6 cut(s) 164, 897, 1054, 1184, 1208, 1482
MluNI TGGCCA 2 cut(s) 453, 482
MlyI GAGTC 1 cut(s) 375
MnlI CCTC 9 cut(s) 54, 228, 537, 653, 728, 936, 1350, 1399, 1412
Mox20I TGGCCA 2 cut(s) 453, 482
Mph1103I ATGCAT 1 cut(s) 1337
MroI TCCGGA 2 cut(s) 14, 901
MscI TGGCCA 2 cut(s) 453, 482
MseI TTAA 4 cut(s) 591, 704, 714, 1416
MslI CAYNNNNRTG 2 cut(s) 1259, 1330
Msp20I TGGCCA 2 cut(s) 453, 482
MspCI CTTAAG 2 cut(s) 590, 703
MspI CCGG 6 cut(s) 15, 237, 314, 902, 929, 1246
MspR9I CCNGG 1 cut(s) 1090
Mva1269I GAATGC 1 cut(s) 1335
MvaI CCWGG 1 cut(s) 1090
MvnI CGCG 1 cut(s) 1234
MwoI GCNNNNNNNGC 4 cut(s) 386, 560, 920, 1393
NdeII GATC 5 cut(s) 95, 181, 348, 835, 1204
NlaIII CATG 6 cut(s) 273, 281, 481, 1105, 1312, 1525
NlaIV GGNNCC 5 cut(s) 287, 312, 924, 1042, 1230
NmuCI GTSAC 6 cut(s) 394, 664, 757, 979, 1138, 1248
NsiI ATGCAT 1 cut(s) 1337
NspI RCATGY 2 cut(s) 281, 1525
OliI CACNNNNGTG 1 cut(s) 1259
PaeR7I CTCGAG 1 cut(s) 431
PagI TCATGA 1 cut(s) 1101
PciI ACATGT 2 cut(s) 277, 1521
PctI GAATGC 1 cut(s) 1335
PflMI CCANNNNNTGG 1 cut(s) 1036
PkrI GCNGC 6 cut(s) 148, 208, 215, 388, 1233, 1282
PleI GAGTC 1 cut(s) 374
PpsI GAGTC 1 cut(s) 374
PpuMI RGGWCCY 1 cut(s) 497
PscI ACATGT 2 cut(s) 277, 1521
PshAI GACNNNNGTC 1 cut(s) 1109
Psp124BI GAGCTC 1 cut(s) 244
Psp5II RGGWCCY 1 cut(s) 497
Psp6I CCWGG 1 cut(s) 1088
PspEI GGTNACC 1 cut(s) 394
PspFI CCCAGC 1 cut(s) 354
PspGI CCWGG 1 cut(s) 1088
PspN4I GGNNCC 5 cut(s) 287, 312, 924, 1042, 1230
PspPI GGNCC 2 cut(s) 497, 524
PspPPI RGGWCCY 1 cut(s) 497
PstI CTGCAG 2 cut(s) 534, 1128
PstNI CAGNNNCTG 1 cut(s) 753
RsaI GTAC 3 cut(s) 287, 638, 829
RsaNI GTAC 3 cut(s) 286, 637, 828
RseI CAYNNNNRTG 2 cut(s) 1259, 1330
SacI GAGCTC 1 cut(s) 244
SaqAI TTAA 4 cut(s) 591, 704, 714, 1416
SatI GCNGC 6 cut(s) 147, 207, 214, 387, 1232, 1281
Sau3AI GATC 5 cut(s) 95, 181, 348, 835, 1204
Sau96I GGNCC 2 cut(s) 497, 524
SchI GAGTC 1 cut(s) 375
ScrFI CCNGG 1 cut(s) 1090
SduI GDGCHC 2 cut(s) 244, 438
SexAI ACCWGGT 1 cut(s) 1088
SfaNI GCATC 5 cut(s) 179, 870, 1322, 1478, 1483
SfcI CTRYAG 5 cut(s) 88, 530, 967, 1124, 1464
Sfr274I CTCGAG 1 cut(s) 431
SinI GGWCC 1 cut(s) 497
SlaI CTCGAG 1 cut(s) 431
SmiMI CAYNNNNRTG 2 cut(s) 1259, 1330
SmlI CTYRAG 4 cut(s) 254, 431, 590, 703
SmoI CTYRAG 4 cut(s) 254, 431, 590, 703
Sse9I AATT 6 cut(s) 164, 897, 1054, 1184, 1208, 1482
SsiI CCGC 2 cut(s) 207, 1232
SspI AATATT 1 cut(s) 515
SspMI CTAG 1 cut(s) 1343
SstI GAGCTC 1 cut(s) 244
StyD4I CCNGG 1 cut(s) 1088
StyI CCWWGG 1 cut(s) 381
TaaI ACNGT 5 cut(s) 142, 971, 1045, 1144, 1258
TaqI TCGA 4 cut(s) 94, 231, 432, 472
TasI AATT 6 cut(s) 164, 897, 1054, 1184, 1208, 1482
TatI WGTACW 1 cut(s) 827
TauI GCSGC 2 cut(s) 209, 1234
Tru1I TTAA 4 cut(s) 591, 704, 714, 1416
Tru9I TTAA 4 cut(s) 591, 704, 714, 1416
TscAI CASTG 5 cut(s) 43, 766, 976, 1000, 1149
TseFI GTSAC 6 cut(s) 394, 664, 757, 979, 1138, 1248
TseI GCWGC 4 cut(s) 146, 213, 386, 1280
Tsp45I GTSAC 6 cut(s) 394, 664, 757, 979, 1138, 1248
TspDTI ATGAA 3 cut(s) 644, 1182, 1339
TspGWI ACGGA 3 cut(s) 321, 1204, 1208
TspRI CASTG 5 cut(s) 43, 766, 976, 1000, 1149
Van91I CCANNNNNTGG 1 cut(s) 1036
Vha464I CTTAAG 2 cut(s) 590, 703
VpaK11BI GGWCC 1 cut(s) 497
XapI RAATTY 2 cut(s) 1184, 1482
XbaI TCTAGA 1 cut(s) 1342
XceI RCATGY 2 cut(s) 281, 1525
XcmI CCANNNNNNNNNTGG 1 cut(s) 446
XhoI CTCGAG 1 cut(s) 431
XspI CTAG 1 cut(s) 1343
Zsp2I ATGCAT 1 cut(s) 1337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.