RchiOBHm_Chr1g0334381

GABA transporter 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000597
Physical Location & Seq
Forward (+)
26567380 .. 26571036
3657 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56311

Sequence Viewer

Length: 1398 bp
ATGGGAACTGTTGCTGCTCCATACATGATGGAATTAGCATCTGAGGGTGATCAGAAGCAAAATGGTGCCGAGGCGCCCGGCGGCCCTCCGAAAGAGCTTGACGCCGGAGCTCTCTTCGTTCTCAAATCGCAAGGGTCGTGGTTACATGTTGGGTACCACTTGACCACATCTATAGTGGCTCCGGTGCTTCTAAGTCTTCCGTTTGCGATGGCCTTGCTCGGCTGGGTTGGGGGAGTCATTTGTGTGGCCTTGGCAGGTTTGGTCACCTTCTACTCCTACAATCTTCTCTCTTTAGTTCTTGAGCACCAAGAAAAGCTTGGGCATCGTCAACTTCGCTTTCGAGACATGGCCAAAGACATTTTAGGTCCTGCATGGGGCAAATATTTTGTGGGTCCTTTGCAATTTGGGATATGCTATGGTGCAGTCATCGCTTGCACATTACTTGGAGGGCAGAGCCTTAAGTTTATTTACTTGCTCTCTAATCCAGATGGAACAATGAAGCTGTACCAGTTTATTATTATGTTCGGAGGCGTCACACTCTTTTTGGCTCAAATGCCATCCTTCCACTCCTTAAGGCATATTAACCTCGTTTCTCTAATCCTTTGTCTTGCATATAGCGCCTGCGTCACTGCTGGCTGCATATACGTTGGGCATACGAACAATGCTCCTGTAAAGGACTATTCCATAAAAGGAAGTACAAAAGCTCGGTATTTTGGTATCTTTAATGGCATCTCAATCATCGCTACCACATACGCAAGTGGAATAATTCCGGAGATACAGGCAACTTTGGCACCTCCAATAAAAGGCAAGATGTTCAAAGGGCTATGTGTGTGCTATAGTGTGATAGTGACAACCTATTTCACTGTCGCAATGTCTGGGTATTGGGCGTTTGGCAACCAAGCTATGGGAACAGTTCTTTCCAATTTTATGGGTGTTGATGGGAAGCTTTTACTCCCTACCTGGTTTTTACTCATGACCAATGTCTTCACTCTTGTGCAAGTCTTGGCTGTCACAGTGGTTTACTTGCAACCAACAAATGAAGTGTTTGAGAAGAAATTTGCAGACCCAAAAATGGATCAATTTTCCATCCGTAATGTTGTGCCGCGATTGATTCTCCGGTCGATCACCGTCGTGGTAGCTACATTTTTTGCTGCGCTGTTACCTTTCTTCGGAGATATCATGGCATTGTTTGGGGCATTTGGATGCATTCCTCTAGATTTCATTTTGCCAATGATATTCTACAATGTGGCTTTCAAGCCCTCAAAGCAAAGCCTCATATTTTGGGTTAACACATTGATAGCAGGAGTATCGTTCTTGTTGGTTGGGGTAGGGGCTGTAGCATCTGTTAGACAGATTATTCTTGATGCTAAAACATATCACCTATTTGCTAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

465

Amino Acids

50.66

Weight (kDa)

8.99

Isoelectric Point (pI)

28.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 44 - 447 3.6e-67 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000597)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08230 AT1G08230 AT1G08230 AT1G08230 AT1G08230
fragaria_vesca FvH4_3g30140 FvH4_7g06340 FvH4_7g06350 FvH4_7g06350
malus_domestica MD02G1244800.v1.1 MD03G1133300.v1.1 MD07G1072100.v1.1 MD07G1072300.v1.1 MD11G1155800.v1.1 MD11G1156000.v1.1
prunus_persica Prupe.2G090300_v2.0.a1 Prupe.2G090500_v2.0.a1 Prupe.6G118000_v2.0.a1 Prupe.6G118000_v2.0.a1 Prupe.6G118000_v2.0.a1
pyrus_communis pycom02g21070 pycom03g08970 pycom07g05520
rosa_chinensis RchiOBHm_Chr1g0334311 RchiOBHm_Chr1g0334341 RchiOBHm_Chr1g0334351 RchiOBHm_Chr1g0334371 RchiOBHm_Chr1g0334381 RchiOBHm_Chr1g0334431 RchiOBHm_Chr5g0055491 RchiOBHm_Chr5g0055511
rosa_laevigata RLG00000029454 RLG00000029457 RLG00000029458 RLG00000029459 RLG00000029461 RLG00000034991 RLG00000034993
rosa_multiflora Rmu_sc0001673.1_g000036 Rmu_sc0001673.1_g000040 Rmu_sc0016880.1_g000002 Rmu_ssc0000047.1_g000014 Rmu_ssc0000047.1_g000015 Rmu_ssc0000047.1_g000016 Rmu_ssc0000047.1_g000023
rosa_roxburghii Rroxscaffold_1G00024820 Rroxscaffold_1G00024850 Rroxscaffold_1G00024860 Rroxscaffold_4G00316880 Rroxscaffold_4G00316900
rosa_rugosa Rorug01G0113300.1 Rorug01G0113400 Rorug01G0113500 Rorug05G0293200 Rorug05G0293200 Rorug05G0293400.1
rosa_samantha Rh1AG138200 Rh1AG138300 Rh1AG139000 Rh1BG104900 Rh1CG130400 Rh1CG130500 Rh1CG131000 Rh1DG142700 Rh1DG142800 Rh5AG362800 Rh5AG363000 Rh5BG375000 Rh5BG375200 Rh5CG396900 Rh5CG397100 Rh5DG388300 Rh5DG388400
rosa_wichuraiana Rw0G003720 Rw0G003730 Rw0G003740 Rw1G011440 Rw1G011450 Rw5G034150 Rw5G034170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 245
Acc65I GGTACC 1 cut(s) 153
AccB1I GGYRCC 4 cut(s) 65, 73, 153, 790
AccB7I CCANNNNNTGG 1 cut(s) 904
AccII CGCG 1 cut(s) 1105
AccIII TCCGGA 1 cut(s) 769
AciI CCGC 2 cut(s) 81, 1103
AclWI GGATC 1 cut(s) 1083
AcoI YGGCCR 1 cut(s) 348
AcsI RAATTY 1 cut(s) 1055
AcyI GRCGYC 3 cut(s) 74, 102, 531
AfaI GTAC 3 cut(s) 155, 506, 697
AfiI CCNNNNNNNGG 5 cut(s) 374, 803, 904, 1072, 1169
AflII CTTAAG 2 cut(s) 458, 571
AflIII ACRYGT 2 cut(s) 145, 1392
AgsI TTSAA 2 cut(s) 817, 1255
AjnI CCWGG 1 cut(s) 959
AleI CACNNNNGTG 2 cut(s) 992, 1130
AluBI AGCT 8 cut(s) 97, 110, 316, 502, 704, 902, 946, 1139
AluI AGCT 8 cut(s) 97, 110, 316, 502, 704, 902, 946, 1139
Alw21I GWGCWC 2 cut(s) 112, 306
Alw26I GTCTC 1 cut(s) 336
AlwI GGATC 1 cut(s) 1083
Aor13HI TCCGGA 1 cut(s) 769
AoxI GGCC 4 cut(s) 82, 210, 246, 348
ApeKI GCWGC 3 cut(s) 14, 636, 1151
ApoI RAATTY 1 cut(s) 1055
Asp718I GGTACC 1 cut(s) 153
AspLEI GCGC 3 cut(s) 76, 620, 1156
AspS9I GGNCC 3 cut(s) 83, 365, 392
AsuC2I CCSGG 1 cut(s) 78
AsuHPI GGTGA 4 cut(s) 59, 256, 1117, 1370
AvaII GGWCC 2 cut(s) 365, 392
BalI TGGCCA 1 cut(s) 350
BanI GGYRCC 4 cut(s) 65, 73, 153, 790
BanII GRGCYC 1 cut(s) 112
BbsI GAAGAC 2 cut(s) 188, 976
Bbv12I GWGCWC 2 cut(s) 112, 306
BbvI GCAGC 2 cut(s) 623, 1138
BccI CCATC 6 cut(s) 22, 202, 482, 565, 932, 1094
BcgI CGANNNNNNTGC 4 cut(s) 196, 230, 1290, 1324
BciT130I CCWGG 1 cut(s) 961
BclI TGATCA 1 cut(s) 49
BcnI CCSGG 1 cut(s) 78
BcoDI GTCTC 1 cut(s) 336
BfaI CTAG 1 cut(s) 1214
BfmI CTRYAG 3 cut(s) 171, 835, 1335
BfoI RGCGCY 2 cut(s) 77, 621
BfrI CTTAAG 2 cut(s) 458, 571
BfuAI ACCTGC 1 cut(s) 245
BisI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
BlsI GCNGC 5 cut(s) 16, 83, 638, 1104, 1153
Bme1390I CCNGG 2 cut(s) 78, 961
Bme18I GGWCC 2 cut(s) 365, 392
BmgT120I GGNCC 3 cut(s) 83, 365, 392
BmiI GGNNCC 6 cut(s) 67, 75, 155, 180, 393, 792
BmrFI CCNGG 2 cut(s) 78, 961
BmsI GCATC 6 cut(s) 47, 331, 738, 1193, 1349, 1354
BoxI GACNNNNGTC 1 cut(s) 980
BpiI GAAGAC 2 cut(s) 188, 976
BpuEI CTTGAG 1 cut(s) 320
BpuMI CCSGG 1 cut(s) 78
BsaHI GRCGYC 3 cut(s) 74, 102, 531
BsaJI CCNNGG 2 cut(s) 69, 249
BsaWI WCCGGW 3 cut(s) 181, 769, 1116
Bsc4I CCNNNNNNNGG 5 cut(s) 374, 803, 904, 1072, 1169
Bse1I ACTGG 1 cut(s) 508
Bse3DI GCAATG 1 cut(s) 876
BseAI TCCGGA 1 cut(s) 769
BseBI CCWGG 1 cut(s) 961
BseDI CCNNGG 2 cut(s) 69, 249
BseGI GGATG 3 cut(s) 557, 1086, 1208
BseLI CCNNNNNNNGG 5 cut(s) 374, 803, 904, 1072, 1169
BseMI GCAATG 1 cut(s) 876
BseMII CTCAG 1 cut(s) 33
BseNI ACTGG 1 cut(s) 508
BseXI GCAGC 2 cut(s) 623, 1138
BseYI CCCAGC 1 cut(s) 222
BsgI GTGCAG 1 cut(s) 441
Bsh1236I CGCG 1 cut(s) 1105
Bsh1285I CGRYCG 1 cut(s) 1121
BshFI GGCC 4 cut(s) 84, 212, 248, 350
BshNI GGYRCC 4 cut(s) 65, 73, 153, 790
BsiEI CGRYCG 1 cut(s) 1121
BsiHKAI GWGCWC 2 cut(s) 112, 306
BsiSI CCGG 5 cut(s) 78, 105, 182, 770, 1117
BslI CCNNNNNNNGG 5 cut(s) 374, 803, 904, 1072, 1169
BsmAI GTCTC 1 cut(s) 336
BsmI GAATGC 1 cut(s) 1206
BsnI GGCC 4 cut(s) 84, 212, 248, 350
Bsp1286I GDGCHC 2 cut(s) 112, 306
Bsp13I TCCGGA 1 cut(s) 769
Bsp143I GATC 3 cut(s) 49, 1075, 1122
BspACI CCGC 2 cut(s) 81, 1103
BspANI GGCC 4 cut(s) 84, 212, 248, 350
BspCNI CTCAG 1 cut(s) 34
BspEI TCCGGA 1 cut(s) 769
BspFNI CGCG 1 cut(s) 1105
BspHI TCATGA 1 cut(s) 972
BspLI GGNNCC 6 cut(s) 67, 75, 155, 180, 393, 792
BspMI ACCTGC 1 cut(s) 245
BspPI GGATC 1 cut(s) 1083
BspT107I GGYRCC 4 cut(s) 65, 73, 153, 790
BspTI CTTAAG 2 cut(s) 458, 571
BsrDI GCAATG 1 cut(s) 876
BsrI ACTGG 1 cut(s) 508
BssECI CCNNGG 2 cut(s) 69, 249
BssMI GATC 3 cut(s) 49, 1075, 1122
BssNI GRCGYC 3 cut(s) 74, 102, 531
BssT1I CCWWGG 1 cut(s) 249
Bst2UI CCWGG 1 cut(s) 961
Bst4CI ACNGT 5 cut(s) 10, 865, 913, 1015, 1129
Bst6I CTCTTC 1 cut(s) 119
BstACI GRCGYC 3 cut(s) 74, 102, 531
BstAFI CTTAAG 2 cut(s) 458, 571
BstC8I GCNNGC 3 cut(s) 433, 622, 634
BstDEI CTNAG 2 cut(s) 42, 191
BstEII GGTNACC 1 cut(s) 262
BstF5I GGATG 3 cut(s) 557, 1086, 1208
BstFNI CGCG 1 cut(s) 1105
BstH2I RGCGCY 2 cut(s) 77, 621
BstHHI GCGC 3 cut(s) 76, 620, 1156
BstKTI GATC 3 cut(s) 52, 1078, 1125
BstMAI GTCTC 1 cut(s) 336
BstMBI GATC 3 cut(s) 49, 1075, 1122
BstMCI CGRYCG 1 cut(s) 1121
BstMWI GCNNNNNNNGC 4 cut(s) 428, 617, 788, 1264
BstNI CCWGG 1 cut(s) 961
BstNSI RCATGY 2 cut(s) 149, 1396
BstPAI GACNNNNGTC 1 cut(s) 980
BstPI GGTNACC 1 cut(s) 262
BstSCI CCNGG 2 cut(s) 76, 959
BstSFI CTRYAG 3 cut(s) 171, 835, 1335
BstUI CGCG 1 cut(s) 1105
BstV1I GCAGC 2 cut(s) 623, 1138
BstV2I GAAGAC 2 cut(s) 188, 976
BstXI CCANNNNNNTGG 1 cut(s) 928
BsuRI GGCC 4 cut(s) 84, 212, 248, 350
BtgZI GCGATG 3 cut(s) 221, 412, 724
BtsCI GGATG 3 cut(s) 557, 1086, 1208
BtsI GCAGTG 1 cut(s) 627
BtsIMutI CAGTG 3 cut(s) 627, 861, 1020
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 3 cut(s) 433, 622, 634
CciI TCATGA 1 cut(s) 972
CfoI GCGC 3 cut(s) 76, 620, 1156
Cfr13I GGNCC 3 cut(s) 83, 365, 392
CseI GACGC 3 cut(s) 110, 520, 613
CsiI ACCWGGT 1 cut(s) 959
Csp6I GTAC 3 cut(s) 154, 505, 696
CspCI CAANNNNNGTGG 2 cut(s) 119, 154
CviAII CATG 7 cut(s) 25, 146, 346, 372, 973, 1180, 1393
CviQI GTAC 3 cut(s) 154, 505, 696
DdeI CTNAG 2 cut(s) 42, 191
DinI GGCGCC 1 cut(s) 75
DpnI GATC 3 cut(s) 51, 1077, 1124
DpnII GATC 3 cut(s) 49, 1075, 1122
EaeI YGGCCR 1 cut(s) 348
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
Ecl136II GAGCTC 1 cut(s) 110
Eco130I CCWWGG 1 cut(s) 249
Eco24I GRGCYC 1 cut(s) 112
Eco32I GATATC 1 cut(s) 1177
Eco47I GGWCC 2 cut(s) 365, 392
Eco53kI GAGCTC 1 cut(s) 110
Eco91I GGTNACC 1 cut(s) 262
EcoICRI GAGCTC 1 cut(s) 110
EcoO109I RGGNCCY 2 cut(s) 365, 392
EcoO65I GGTNACC 1 cut(s) 262
EcoRII CCWGG 1 cut(s) 959
EcoRV GATATC 1 cut(s) 1177
EcoT14I CCWWGG 1 cut(s) 249
EcoT22I ATGCAT 1 cut(s) 1208
EcoT38I GRGCYC 1 cut(s) 112
EgeI GGCGCC 1 cut(s) 75
EheI GGCGCC 1 cut(s) 75
ErhI CCWWGG 1 cut(s) 249
FaeI CATG 7 cut(s) 28, 149, 349, 375, 976, 1183, 1396
FalI AAGNNNNNCTT 2 cut(s) 300, 332
FatI CATG 7 cut(s) 24, 145, 345, 371, 972, 1179, 1392
FbaI TGATCA 1 cut(s) 49
Fnu4HI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
FokI GGATG 3 cut(s) 544, 1073, 1215
FriOI GRGCYC 1 cut(s) 112
Fsp4HI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
FspBI CTAG 1 cut(s) 1214
GlaI GCGC 3 cut(s) 75, 619, 1155
GluI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
GsaI CCCAGC 1 cut(s) 226
HaeII RGCGCY 2 cut(s) 77, 621
HaeIII GGCC 4 cut(s) 84, 212, 248, 350
HapII CCGG 5 cut(s) 78, 105, 182, 770, 1117
HgaI GACGC 3 cut(s) 110, 520, 613
HhaI GCGC 3 cut(s) 76, 620, 1156
Hin1I GRCGYC 3 cut(s) 74, 102, 531
Hin1II CATG 7 cut(s) 28, 149, 349, 375, 976, 1183, 1396
Hin6I GCGC 3 cut(s) 74, 618, 1154
HinP1I GCGC 3 cut(s) 74, 618, 1154
HincII GTYRAC 2 cut(s) 329, 1288
HindII GTYRAC 2 cut(s) 329, 1288
HindIII AAGCTT 2 cut(s) 314, 944
HinfI GANTC 2 cut(s) 234, 1111
HpaI GTTAAC 1 cut(s) 1288
HpaII CCGG 5 cut(s) 78, 105, 182, 770, 1117
HphI GGTGA 4 cut(s) 59, 256, 1117, 1370
Hpy166II GTNNAC 3 cut(s) 329, 1021, 1288
Hpy188I TCNGA 5 cut(s) 43, 54, 90, 527, 1172
Hpy188III TCNNGA 7 cut(s) 299, 341, 485, 770, 973, 1214, 1361
Hpy8I GTNNAC 3 cut(s) 329, 1021, 1288
Hpy99I CGWCG 1 cut(s) 1133
HpyAV CCTTC 2 cut(s) 277, 571
HpyCH4III ACNGT 5 cut(s) 10, 865, 913, 1015, 1129
HpyCH4IV ACGT 1 cut(s) 645
HpyF10VI GCNNNNNNNGC 4 cut(s) 428, 617, 788, 1264
HpyF3I CTNAG 2 cut(s) 42, 191
HpySE526I ACGT 1 cut(s) 645
Hsp92I GRCGYC 3 cut(s) 74, 102, 531
Hsp92II CATG 7 cut(s) 28, 149, 349, 375, 976, 1183, 1396
HspAI GCGC 3 cut(s) 74, 618, 1154
KasI GGCGCC 1 cut(s) 73
Kpn2I TCCGGA 1 cut(s) 769
KpnI GGTACC 1 cut(s) 157
Ksp22I TGATCA 1 cut(s) 49
KspAI GTTAAC 1 cut(s) 1288
Kzo9I GATC 3 cut(s) 49, 1075, 1122
LmnI GCTCC 4 cut(s) 22, 107, 184, 670
Lsp1109I GCAGC 2 cut(s) 623, 1138
LweI GCATC 6 cut(s) 47, 331, 738, 1193, 1349, 1354
MabI ACCWGGT 1 cut(s) 959
MaeI CTAG 1 cut(s) 1214
MaeII ACGT 1 cut(s) 645
MaeIII GTNAC 7 cut(s) 141, 262, 532, 625, 847, 1009, 1158
MalI GATC 3 cut(s) 51, 1077, 1124
MboI GATC 3 cut(s) 49, 1075, 1122
MboII GAAGA 6 cut(s) 106, 188, 275, 976, 1063, 1159
MhlI GDGCHC 2 cut(s) 112, 306
MlsI TGGCCA 1 cut(s) 350
MluCI AATT 6 cut(s) 32, 401, 765, 922, 1055, 1079
MluNI TGGCCA 1 cut(s) 350
Mly113I GGCGCC 1 cut(s) 74
MlyI GAGTC 1 cut(s) 243
Mox20I TGGCCA 1 cut(s) 350
Mph1103I ATGCAT 1 cut(s) 1208
MroI TCCGGA 1 cut(s) 769
MscI TGGCCA 1 cut(s) 350
MseI TTAA 5 cut(s) 459, 572, 582, 723, 1287
MslI CAYNNNNRTG 4 cut(s) 242, 992, 1130, 1201
Msp20I TGGCCA 1 cut(s) 350
MspCI CTTAAG 2 cut(s) 458, 571
MspI CCGG 5 cut(s) 78, 105, 182, 770, 1117
MspR9I CCNGG 2 cut(s) 78, 961
Mva1269I GAATGC 1 cut(s) 1206
MvaI CCWGG 1 cut(s) 961
MvnI CGCG 1 cut(s) 1105
MwoI GCNNNNNNNGC 4 cut(s) 428, 617, 788, 1264
NarI GGCGCC 1 cut(s) 74
NciI CCSGG 1 cut(s) 78
NdeII GATC 3 cut(s) 49, 1075, 1122
NlaIII CATG 7 cut(s) 28, 149, 349, 375, 976, 1183, 1396
NlaIV GGNNCC 6 cut(s) 67, 75, 155, 180, 393, 792
NmeAIII GCCGAG 2 cut(s) 94, 198
NmuCI GTSAC 5 cut(s) 262, 532, 625, 847, 1009
NsiI ATGCAT 1 cut(s) 1208
NspI RCATGY 2 cut(s) 149, 1396
OliI CACNNNNGTG 2 cut(s) 992, 1130
PagI TCATGA 1 cut(s) 972
PciI ACATGT 2 cut(s) 145, 1392
PcsI WCGNNNNNNNCGW 1 cut(s) 134
PctI GAATGC 1 cut(s) 1206
PfeI GAWTC 1 cut(s) 1111
PflMI CCANNNNNTGG 1 cut(s) 904
PkrI GCNGC 5 cut(s) 16, 83, 638, 1104, 1153
PleI GAGTC 1 cut(s) 242
PluTI GGCGCC 1 cut(s) 77
PpsI GAGTC 1 cut(s) 242
PpuMI RGGWCCY 2 cut(s) 365, 392
PscI ACATGT 2 cut(s) 145, 1392
PshAI GACNNNNGTC 1 cut(s) 980
Psp124BI GAGCTC 1 cut(s) 112
Psp5II RGGWCCY 2 cut(s) 365, 392
Psp6I CCWGG 1 cut(s) 959
PspEI GGTNACC 1 cut(s) 262
PspFI CCCAGC 1 cut(s) 222
PspGI CCWGG 1 cut(s) 959
PspN4I GGNNCC 6 cut(s) 67, 75, 155, 180, 393, 792
PspPI GGNCC 3 cut(s) 83, 365, 392
PspPPI RGGWCCY 2 cut(s) 365, 392
RsaI GTAC 3 cut(s) 155, 506, 697
RsaNI GTAC 3 cut(s) 154, 505, 696
RseI CAYNNNNRTG 4 cut(s) 242, 992, 1130, 1201
SacI GAGCTC 1 cut(s) 112
SaqAI TTAA 5 cut(s) 459, 572, 582, 723, 1287
SatI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
Sau3AI GATC 3 cut(s) 49, 1075, 1122
Sau96I GGNCC 3 cut(s) 83, 365, 392
SchI GAGTC 1 cut(s) 243
ScrFI CCNGG 2 cut(s) 78, 961
SduI GDGCHC 2 cut(s) 112, 306
SexAI ACCWGGT 1 cut(s) 959
SfaNI GCATC 6 cut(s) 47, 331, 738, 1193, 1349, 1354
SfcI CTRYAG 3 cut(s) 171, 835, 1335
SfoI GGCGCC 1 cut(s) 75
SinI GGWCC 2 cut(s) 365, 392
SmiMI CAYNNNNRTG 4 cut(s) 242, 992, 1130, 1201
SmlI CTYRAG 3 cut(s) 299, 458, 571
SmoI CTYRAG 3 cut(s) 299, 458, 571
Sse9I AATT 6 cut(s) 32, 401, 765, 922, 1055, 1079
SsiI CCGC 2 cut(s) 81, 1103
SspDI GGCGCC 1 cut(s) 73
SspI AATATT 1 cut(s) 383
SspMI CTAG 1 cut(s) 1214
SstI GAGCTC 1 cut(s) 112
StyD4I CCNGG 2 cut(s) 76, 959
StyI CCWWGG 1 cut(s) 249
TaaI ACNGT 5 cut(s) 10, 865, 913, 1015, 1129
TaiI ACGT 1 cut(s) 648
TaqI TCGA 2 cut(s) 340, 1121
TasI AATT 6 cut(s) 32, 401, 765, 922, 1055, 1079
TatI WGTACW 1 cut(s) 695
TauI GCSGC 2 cut(s) 84, 1105
TfiI GAWTC 1 cut(s) 1111
Tru1I TTAA 5 cut(s) 459, 572, 582, 723, 1287
Tru9I TTAA 5 cut(s) 459, 572, 582, 723, 1287
TscAI CASTG 3 cut(s) 634, 868, 1020
TseFI GTSAC 5 cut(s) 262, 532, 625, 847, 1009
TseI GCWGC 3 cut(s) 14, 636, 1151
Tsp45I GTSAC 5 cut(s) 262, 532, 625, 847, 1009
TspDTI ATGAA 3 cut(s) 512, 1053, 1210
TspGWI ACGGA 2 cut(s) 189, 1079
TspRI CASTG 3 cut(s) 634, 868, 1020
Van91I CCANNNNNTGG 1 cut(s) 904
Vha464I CTTAAG 2 cut(s) 458, 571
VpaK11BI GGWCC 2 cut(s) 365, 392
XapI RAATTY 1 cut(s) 1055
XbaI TCTAGA 1 cut(s) 1213
XceI RCATGY 2 cut(s) 149, 1396
XcmI CCANNNNNNNNNTGG 2 cut(s) 172, 314
XspI CTAG 1 cut(s) 1214
Zsp2I ATGCAT 1 cut(s) 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.