MD02G1244800.v1.1

GABA transporter 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000597
Physical Location & Seq
Reverse (-)
29475795 .. 29480278
4484 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1244800.v1.1.491

Sequence Viewer

Length: 1527 bp
ATGATTATTAATTGGCATTATATTACTATAAATAGTTTGTCTTCGCTTTTCTTACTACCGGATATTCTACTTTCTCACTGCATATACACTCCAGAGAGAGAGGGGGAGGAGTGGAGAGAGAGGGAGGAAAGGAAGAGAGAGATGGGAACGGTGGCTCCAAACTTGATGGAAGTATCCGCCGGACGTGATAACGAAAACGGTACTGCCAGAAGCCCTCCGGCAAAGGTGCTTGATGCTGGAGCTCTCTTCGTCCTCAAATCTCAAGGATCATGGTTGCACTGTGGGTACCACTTGACGACGTCGATAGTAGCTCCAGTGATTCTAACTCTTCCCTTTGCGCTGGCCTTGCTAGGCTGGGTTGGGGGACTCATATGCCTCGCATTGGCTGCTTTGGTCACTTTCTATTCCTACAATCTTCTATCCTTGGTTCTGGAGCACCAAGAAAAGCTTGGTCATCGCCAGCTTCGCTTTCGAGACATGGCCCGAGACATTTTAGGTCCTGGATGGGGCAAATATTTTGTTGGTCCTTTGCAGTTTTGGATTTGCTACGGTGCAGTTATTGCTTGCACTTTACTTGGAGGGCAGAGTCTTAAGTTCATTTACTTGCTCTCCTACCCAGATGGCACAATGAAGCTACACCAATTTATAATTATTTTCGGAACCGTTCCACTGGTTTTAGCTCAAATGCCATCCTTCCACTCCTTAAGGCATATTAATCTTGTCTCTCTTATCCTTTGCCTGGCATTCAGCACTTGTGCCACTGCTGGTTCCATATACATTGGACATTCCGATAATGCTCCTAGAAGGGAGTATACTGTGAAAGGAAGCGCAAAAGACCGCAGTTTTGGTATCTTTAATGCCATTTCAATCATAGCTACTACATATGCAAGTGGAATAATTCCTGAAATACAGGCAACTTTAGCACCTCCAGTAAAAGGAAAGATGTTTAAAGGTCTATATGTTTGCTATAGTGTTATAGTGACAACATATTTCAGTGTGGCAATATCTGGGTACTGGGCTTTTGGAAATCAAGCCATGGGAACAGTTCTTTCAAATTTCATGGGTGATGGCAAGCCTTTATTGCCTACCTGGTTCTTGCTAATGACCAATGTCTTCACCCTTTTGCAAGTCTCAGCTGTCACCGTGGTTTACTTGCAACCAACAAATGAAGTGTTTGAGAAGAAATTTGCAGACCCAAAAAAGGATCAATTCTCAGTCCGTAATGTTGTGCCGAGATTGATTCTCCGGTCACTGTCCGTCATAGTAGCAACAACATTTGCTGCAATGCTACCTTTCTTTGGAGATATCATGGCATTGTTTGGGGCATTTGGATGCATTCCTCTAGATTTCATTTTGCCAATGATTTTCTACAATGTAACTTTCAAGCCTTCCAAACAAAGCCTTATATTTTGGGTTAACACATCGATAGCAGGAGTGTCCTTCTTGTTAGTCGGGGTAGGGGCTGTAGCATCAGTTAGGCAAATTGTTCTTGATGCCAAAACGTATCGGTTATTTGCTAACATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

509

Amino Acids

56.22

Weight (kDa)

9.07

Isoelectric Point (pI)

32.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 88 - 491 4.1e-67 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000597)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08230 AT1G08230 AT1G08230 AT1G08230 AT1G08230
fragaria_vesca FvH4_3g30140 FvH4_7g06340 FvH4_7g06350 FvH4_7g06350
malus_domestica MD02G1244800.v1.1 MD03G1133300.v1.1 MD07G1072100.v1.1 MD07G1072300.v1.1 MD11G1155800.v1.1 MD11G1156000.v1.1
prunus_persica Prupe.2G090300_v2.0.a1 Prupe.2G090500_v2.0.a1 Prupe.6G118000_v2.0.a1 Prupe.6G118000_v2.0.a1 Prupe.6G118000_v2.0.a1
pyrus_communis pycom02g21070 pycom03g08970 pycom07g05520
rosa_chinensis RchiOBHm_Chr1g0334311 RchiOBHm_Chr1g0334341 RchiOBHm_Chr1g0334351 RchiOBHm_Chr1g0334371 RchiOBHm_Chr1g0334381 RchiOBHm_Chr1g0334431 RchiOBHm_Chr5g0055491 RchiOBHm_Chr5g0055511
rosa_laevigata RLG00000029454 RLG00000029457 RLG00000029458 RLG00000029459 RLG00000029461 RLG00000034991 RLG00000034993
rosa_multiflora Rmu_sc0001673.1_g000036 Rmu_sc0001673.1_g000040 Rmu_sc0016880.1_g000002 Rmu_ssc0000047.1_g000014 Rmu_ssc0000047.1_g000015 Rmu_ssc0000047.1_g000016 Rmu_ssc0000047.1_g000023
rosa_roxburghii Rroxscaffold_1G00024820 Rroxscaffold_1G00024850 Rroxscaffold_1G00024860 Rroxscaffold_4G00316880 Rroxscaffold_4G00316900
rosa_rugosa Rorug01G0113300.1 Rorug01G0113400 Rorug01G0113500 Rorug05G0293200 Rorug05G0293200 Rorug05G0293400.1
rosa_samantha Rh1AG138200 Rh1AG138300 Rh1AG139000 Rh1BG104900 Rh1CG130400 Rh1CG130500 Rh1CG131000 Rh1DG142700 Rh1DG142800 Rh5AG362800 Rh5AG363000 Rh5BG375000 Rh5BG375200 Rh5CG396900 Rh5CG397100 Rh5DG388300 Rh5DG388400
rosa_wichuraiana Rw0G003720 Rw0G003730 Rw0G003740 Rw1G011440 Rw1G011450 Rw5G034150 Rw5G034170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 647
AatII GACGTC 1 cut(s) 302
Acc65I GGTACC 1 cut(s) 285
AccB1I GGYRCC 1 cut(s) 285
AccI GTMKAC 1 cut(s) 812
AciI CCGC 2 cut(s) 177, 838
AclWI GGATC 2 cut(s) 274, 1212
AcsI RAATTY 2 cut(s) 1054, 1184
AcyI GRCGYC 1 cut(s) 299
AfaI GTAC 3 cut(s) 202, 287, 1013
AfiI CCNNNNNNNGG 6 cut(s) 382, 506, 739, 935, 1201, 1298
AflII CTTAAG 2 cut(s) 590, 703
AflIII ACRYGT 1 cut(s) 1521
AgsI TTSAA 3 cut(s) 867, 1053, 1384
AjiI CACGTC 1 cut(s) 185
AjnI CCWGG 3 cut(s) 499, 738, 1088
AloI GAACNNNNNNTCC 2 cut(s) 139, 171
AluBI AGCT 8 cut(s) 242, 311, 448, 463, 634, 680, 875, 1136
AluI AGCT 8 cut(s) 242, 311, 448, 463, 634, 680, 875, 1136
Alw21I GWGCWC 2 cut(s) 244, 438
Alw26I GTCTC 4 cut(s) 468, 480, 727, 1135
AlwI GGATC 2 cut(s) 274, 1212
Ama87I CYCGRG 1 cut(s) 483
AoxI GGCC 2 cut(s) 342, 480
ApeKI GCWGC 2 cut(s) 386, 1280
ApoI RAATTY 2 cut(s) 1054, 1184
ArsI GACNNNNNNTTYG 2 cut(s) 827, 859
AseI ATTAAT 2 cut(s) 9, 714
Asp718I GGTACC 1 cut(s) 285
AspLEI GCGC 2 cut(s) 340, 830
AspS9I GGNCC 3 cut(s) 481, 497, 524
AsuHPI GGTGA 3 cut(s) 1076, 1108, 1132
AvaI CYCGRG 1 cut(s) 483
AvaII GGWCC 2 cut(s) 497, 524
BanI GGYRCC 1 cut(s) 285
BanII GRGCYC 1 cut(s) 244
BarI GAAGNNNNNNTAC 2 cut(s) 796, 828
BbsI GAAGAC 2 cut(s) 33, 1105
Bbv12I GWGCWC 2 cut(s) 244, 438
BbvI GCAGC 2 cut(s) 373, 1267
BccI CCATC 6 cut(s) 136, 160, 498, 614, 697, 1061
BciT130I CCWGG 3 cut(s) 501, 740, 1090
BciVI GTATCC 1 cut(s) 184
BcoDI GTCTC 4 cut(s) 468, 480, 727, 1135
BfaI CTAG 3 cut(s) 350, 801, 1343
BfmI CTRYAG 2 cut(s) 967, 1464
BfrI CTTAAG 2 cut(s) 590, 703
BfuI GTATCC 1 cut(s) 184
BisI GCNGC 2 cut(s) 387, 1281
BlsI GCNGC 2 cut(s) 388, 1282
Bme1390I CCNGG 3 cut(s) 501, 740, 1090
Bme18I GGWCC 2 cut(s) 497, 524
BmeT110I CYCGRG 1 cut(s) 483
BmgBI CACGTC 1 cut(s) 185
BmgT120I GGNCC 3 cut(s) 481, 497, 524
BmiI GGNNCC 4 cut(s) 156, 287, 661, 769
BmrFI CCNGG 3 cut(s) 501, 740, 1090
BmrI ACTGGG 1 cut(s) 1024
BmsI GCATC 4 cut(s) 223, 1322, 1478, 1483
BmuI ACTGGG 1 cut(s) 1024
BoxI GACNNNNGTC 1 cut(s) 1109
BpiI GAAGAC 2 cut(s) 33, 1105
BpmI CTGGAG 5 cut(s) 75, 258, 297, 452, 912
BpuEI CTTGAG 1 cut(s) 246
Bsa29I ATCGAT 1 cut(s) 1424
BsaHI GRCGYC 1 cut(s) 299
BsaJI CCNNGG 3 cut(s) 423, 1035, 1143
BsaWI WCCGGW 2 cut(s) 58, 1245
BsaXI ACNNNNNCTCC 4 cut(s) 139, 169, 593, 623
Bsc4I CCNNNNNNNGG 6 cut(s) 382, 506, 739, 935, 1201, 1298
Bse1I ACTGG 4 cut(s) 314, 675, 929, 1019
Bse3DI GCAATG 1 cut(s) 1290
BseBI CCWGG 3 cut(s) 501, 740, 1090
BseCI ATCGAT 1 cut(s) 1424
BseDI CCNNGG 3 cut(s) 423, 1035, 1143
BseGI GGATG 3 cut(s) 509, 689, 1337
BseLI CCNNNNNNNGG 6 cut(s) 382, 506, 739, 935, 1201, 1298
BseMI GCAATG 1 cut(s) 1290
BseMII CTCAG 2 cut(s) 1146, 1227
BseNI ACTGG 4 cut(s) 314, 675, 929, 1019
BseRI GAGGAG 1 cut(s) 122
BseXI GCAGC 2 cut(s) 373, 1267
BseYI CCCAGC 1 cut(s) 354
BsgI GTGCAG 1 cut(s) 573
BshFI GGCC 2 cut(s) 344, 482
BshNI GGYRCC 1 cut(s) 285
BshVI ATCGAT 1 cut(s) 1424
BsiHKAI GWGCWC 2 cut(s) 244, 438
BsiHKCI CYCGRG 1 cut(s) 483
BsiSI CCGG 4 cut(s) 59, 180, 218, 1246
BslFI GGGAC 1 cut(s) 378
BslI CCNNNNNNNGG 6 cut(s) 382, 506, 739, 935, 1201, 1298
BsmAI GTCTC 4 cut(s) 468, 480, 727, 1135
BsmFI GGGAC 1 cut(s) 378
BsmI GAATGC 2 cut(s) 743, 1335
BsnI GGCC 2 cut(s) 344, 482
BsoBI CYCGRG 1 cut(s) 483
Bsp1286I GDGCHC 2 cut(s) 244, 438
Bsp143I GATC 2 cut(s) 266, 1204
Bsp19I CCATGG 1 cut(s) 1035
BspACI CCGC 2 cut(s) 177, 838
BspANI GGCC 2 cut(s) 344, 482
BspCNI CTCAG 2 cut(s) 1145, 1226
BspDI ATCGAT 1 cut(s) 1424
BspLI GGNNCC 4 cut(s) 156, 287, 661, 769
BspPI GGATC 2 cut(s) 274, 1212
BspT107I GGYRCC 1 cut(s) 285
BspTI CTTAAG 2 cut(s) 590, 703
BsrDI GCAATG 1 cut(s) 1290
BsrI ACTGG 4 cut(s) 314, 675, 929, 1019
BssECI CCNNGG 3 cut(s) 423, 1035, 1143
BssMI GATC 2 cut(s) 266, 1204
BssNAI GTATAC 1 cut(s) 813
BssNI GRCGYC 1 cut(s) 299
BssT1I CCWWGG 2 cut(s) 423, 1035
Bst1107I GTATAC 1 cut(s) 813
Bst2UI CCWGG 3 cut(s) 501, 740, 1090
Bst4CI ACNGT 9 cut(s) 151, 200, 281, 551, 664, 817, 1045, 1144, 1254
Bst6I CTCTTC 3 cut(s) 128, 251, 333
BstACI GRCGYC 1 cut(s) 299
BstAFI CTTAAG 2 cut(s) 590, 703
BstAPI GCANNNNNTGC 2 cut(s) 386, 560
BstC8I GCNNGC 4 cut(s) 342, 461, 565, 1073
BstDEI CTNAG 2 cut(s) 1132, 1213
BstDSI CCRYGG 2 cut(s) 1035, 1143
BstF5I GGATG 3 cut(s) 509, 689, 1337
BstHHI GCGC 2 cut(s) 340, 830
BstKTI GATC 2 cut(s) 269, 1207
BstMAI GTCTC 4 cut(s) 468, 480, 727, 1135
BstMBI GATC 2 cut(s) 266, 1204
BstMWI GCNNNNNNNGC 6 cut(s) 346, 386, 465, 560, 920, 1081
BstNI CCWGG 3 cut(s) 501, 740, 1090
BstNSI RCATGY 1 cut(s) 1525
BstPAI GACNNNNGTC 1 cut(s) 1109
BstSCI CCNGG 3 cut(s) 499, 738, 1088
BstSFI CTRYAG 2 cut(s) 967, 1464
BstV1I GCAGC 2 cut(s) 373, 1267
BstV2I GAAGAC 2 cut(s) 33, 1105
BstZ17I GTATAC 1 cut(s) 813
Bsu15I ATCGAT 1 cut(s) 1424
BsuI GTATCC 1 cut(s) 184
BsuRI GGCC 2 cut(s) 344, 482
BsuTUI ATCGAT 1 cut(s) 1424
BtgI CCRYGG 2 cut(s) 1035, 1143
BtgZI GCGATG 1 cut(s) 440
BtrI CACGTC 1 cut(s) 185
BtsCI GGATG 3 cut(s) 509, 689, 1337
BtsI GCAGTG 2 cut(s) 76, 759
BtsIMutI CAGTG 7 cut(s) 76, 277, 321, 668, 759, 1000, 1250
Cac8I GCNNGC 4 cut(s) 342, 461, 565, 1073
CfoI GCGC 2 cut(s) 340, 830
Cfr13I GGNCC 3 cut(s) 481, 497, 524
ClaI ATCGAT 1 cut(s) 1424
CsiI ACCWGGT 1 cut(s) 1088
Csp6I GTAC 3 cut(s) 201, 286, 1012
CviAII CATG 6 cut(s) 270, 478, 1036, 1060, 1309, 1522
CviQI GTAC 3 cut(s) 201, 286, 1012
DdeI CTNAG 2 cut(s) 1132, 1213
DpnI GATC 2 cut(s) 268, 1206
DpnII GATC 2 cut(s) 266, 1204
DraI TTTAAA 1 cut(s) 949
Eam1104I CTCTTC 3 cut(s) 128, 251, 333
EarI CTCTTC 3 cut(s) 128, 251, 333
EciI GGCGGA 1 cut(s) 166
Ecl136II GAGCTC 1 cut(s) 242
Eco130I CCWWGG 2 cut(s) 423, 1035
Eco24I GRGCYC 1 cut(s) 244
Eco32I GATATC 1 cut(s) 1306
Eco47I GGWCC 2 cut(s) 497, 524
Eco53kI GAGCTC 1 cut(s) 242
Eco88I CYCGRG 1 cut(s) 483
EcoICRI GAGCTC 1 cut(s) 242
EcoO109I RGGNCCY 1 cut(s) 497
EcoRII CCWGG 3 cut(s) 499, 738, 1088
EcoRV GATATC 1 cut(s) 1306
EcoT14I CCWWGG 2 cut(s) 423, 1035
EcoT22I ATGCAT 1 cut(s) 1337
EcoT38I GRGCYC 1 cut(s) 244
ErhI CCWWGG 2 cut(s) 423, 1035
FaeI CATG 6 cut(s) 273, 481, 1039, 1063, 1312, 1525
FalI AAGNNNNNCTT 2 cut(s) 432, 464
FaqI GGGAC 1 cut(s) 378
FatI CATG 6 cut(s) 269, 477, 1035, 1059, 1308, 1521
FauNDI CATATG 2 cut(s) 371, 883
FblI GTMKAC 1 cut(s) 812
Fnu4HI GCNGC 2 cut(s) 387, 1281
FokI GGATG 3 cut(s) 516, 676, 1344
FriOI GRGCYC 1 cut(s) 244
Fsp4HI GCNGC 2 cut(s) 387, 1281
FspBI CTAG 3 cut(s) 350, 801, 1343
GlaI GCGC 2 cut(s) 339, 829
GluI GCNGC 2 cut(s) 387, 1281
GsaI CCCAGC 1 cut(s) 358
GsuI CTGGAG 5 cut(s) 75, 258, 297, 452, 912
HaeIII GGCC 2 cut(s) 344, 482
HapII CCGG 4 cut(s) 59, 180, 218, 1246
HhaI GCGC 2 cut(s) 340, 830
Hin1I GRCGYC 1 cut(s) 299
Hin1II CATG 6 cut(s) 273, 481, 1039, 1063, 1312, 1525
Hin6I GCGC 2 cut(s) 338, 828
HinP1I GCGC 2 cut(s) 338, 828
HincII GTYRAC 1 cut(s) 1417
HindII GTYRAC 1 cut(s) 1417
HindIII AAGCTT 1 cut(s) 446
HinfI GANTC 4 cut(s) 319, 366, 586, 1240
HpaI GTTAAC 1 cut(s) 1417
HpaII CCGG 4 cut(s) 59, 180, 218, 1246
HphI GGTGA 3 cut(s) 1076, 1108, 1132
Hpy166II GTNNAC 3 cut(s) 813, 1150, 1417
Hpy188I TCNGA 2 cut(s) 659, 790
Hpy188III TCNNGA 6 cut(s) 92, 431, 473, 902, 1343, 1490
Hpy8I GTNNAC 3 cut(s) 813, 1150, 1417
Hpy99I CGWCG 2 cut(s) 301, 304
HpyAV CCTTC 4 cut(s) 703, 798, 1398, 1450
HpyCH4III ACNGT 9 cut(s) 151, 200, 281, 551, 664, 817, 1045, 1144, 1254
HpyCH4IV ACGT 3 cut(s) 184, 299, 1502
HpyF10VI GCNNNNNNNGC 6 cut(s) 346, 386, 465, 560, 920, 1081
HpyF3I CTNAG 2 cut(s) 1132, 1213
HpySE526I ACGT 3 cut(s) 184, 299, 1502
Hsp92I GRCGYC 1 cut(s) 299
Hsp92II CATG 6 cut(s) 273, 481, 1039, 1063, 1312, 1525
HspAI GCGC 2 cut(s) 338, 828
KpnI GGTACC 1 cut(s) 289
KspAI GTTAAC 1 cut(s) 1417
Kzo9I GATC 2 cut(s) 266, 1204
LmnI GCTCC 5 cut(s) 160, 239, 316, 433, 802
Lsp1109I GCAGC 2 cut(s) 373, 1267
LweI GCATC 4 cut(s) 223, 1322, 1478, 1483
MabI ACCWGGT 1 cut(s) 1088
MaeI CTAG 3 cut(s) 350, 801, 1343
MaeII ACGT 3 cut(s) 184, 299, 1502
MaeIII GTNAC 5 cut(s) 394, 979, 1138, 1248, 1375
MalI GATC 2 cut(s) 268, 1206
MboI GATC 2 cut(s) 266, 1204
MboII GAAGA 7 cut(s) 33, 145, 238, 320, 407, 1105, 1192
MhlI GDGCHC 2 cut(s) 244, 438
MluCI AATT 8 cut(s) 10, 641, 648, 897, 1054, 1184, 1208, 1482
MlyI GAGTC 2 cut(s) 360, 595
Mph1103I ATGCAT 1 cut(s) 1337
MseI TTAA 7 cut(s) 9, 591, 704, 714, 855, 948, 1416
MslI CAYNNNNRTG 1 cut(s) 1330
MspA1I CMGCKG 1 cut(s) 1136
MspCI CTTAAG 2 cut(s) 590, 703
MspI CCGG 4 cut(s) 59, 180, 218, 1246
MspR9I CCNGG 3 cut(s) 501, 740, 1090
Mva1269I GAATGC 2 cut(s) 743, 1335
MvaI CCWGG 3 cut(s) 501, 740, 1090
MwoI GCNNNNNNNGC 6 cut(s) 346, 386, 465, 560, 920, 1081
NcoI CCATGG 1 cut(s) 1035
NdeI CATATG 2 cut(s) 371, 883
NdeII GATC 2 cut(s) 266, 1204
NlaIII CATG 6 cut(s) 273, 481, 1039, 1063, 1312, 1525
NlaIV GGNNCC 4 cut(s) 156, 287, 661, 769
NmeAIII GCCGAG 1 cut(s) 1257
NmuCI GTSAC 4 cut(s) 394, 979, 1138, 1248
NsiI ATGCAT 1 cut(s) 1337
NspI RCATGY 1 cut(s) 1525
PciI ACATGT 1 cut(s) 1521
PctI GAATGC 2 cut(s) 743, 1335
PfeI GAWTC 2 cut(s) 319, 1240
PflFI GACNNNGTC 1 cut(s) 298
PfoI TCCNGGA 1 cut(s) 499
PkrI GCNGC 2 cut(s) 388, 1282
PleI GAGTC 2 cut(s) 360, 594
PpsI GAGTC 2 cut(s) 360, 594
PpuMI RGGWCCY 1 cut(s) 497
PscI ACATGT 1 cut(s) 1521
PshAI GACNNNNGTC 1 cut(s) 1109
PshBI ATTAAT 2 cut(s) 9, 714
PsiI TTATAA 1 cut(s) 647
Psp124BI GAGCTC 1 cut(s) 244
Psp5II RGGWCCY 1 cut(s) 497
Psp6I CCWGG 3 cut(s) 499, 738, 1088
PspFI CCCAGC 1 cut(s) 354
PspGI CCWGG 3 cut(s) 499, 738, 1088
PspN4I GGNNCC 4 cut(s) 156, 287, 661, 769
PspPI GGNCC 3 cut(s) 481, 497, 524
PspPPI RGGWCCY 1 cut(s) 497
PsyI GACNNNGTC 1 cut(s) 298
PvuII CAGCTG 1 cut(s) 1136
RsaI GTAC 3 cut(s) 202, 287, 1013
RsaNI GTAC 3 cut(s) 201, 286, 1012
RseI CAYNNNNRTG 1 cut(s) 1330
SacI GAGCTC 1 cut(s) 244
SaqAI TTAA 7 cut(s) 9, 591, 704, 714, 855, 948, 1416
SatI GCNGC 2 cut(s) 387, 1281
Sau3AI GATC 2 cut(s) 266, 1204
Sau96I GGNCC 3 cut(s) 481, 497, 524
SchI GAGTC 2 cut(s) 360, 595
ScrFI CCNGG 3 cut(s) 501, 740, 1090
SduI GDGCHC 2 cut(s) 244, 438
SexAI ACCWGGT 1 cut(s) 1088
SfaNI GCATC 4 cut(s) 223, 1322, 1478, 1483
SfcI CTRYAG 2 cut(s) 967, 1464
SinI GGWCC 2 cut(s) 497, 524
SmiMI CAYNNNNRTG 1 cut(s) 1330
SmlI CTYRAG 3 cut(s) 261, 590, 703
SmoI CTYRAG 3 cut(s) 261, 590, 703
Sse9I AATT 8 cut(s) 10, 641, 648, 897, 1054, 1184, 1208, 1482
SsiI CCGC 2 cut(s) 177, 838
SspI AATATT 1 cut(s) 515
SspMI CTAG 3 cut(s) 350, 801, 1343
SstI GAGCTC 1 cut(s) 244
StyD4I CCNGG 3 cut(s) 499, 738, 1088
StyI CCWWGG 2 cut(s) 423, 1035
TaaI ACNGT 9 cut(s) 151, 200, 281, 551, 664, 817, 1045, 1144, 1254
TaiI ACGT 3 cut(s) 187, 302, 1505
TaqI TCGA 3 cut(s) 302, 472, 1424
TasI AATT 8 cut(s) 10, 641, 648, 897, 1054, 1184, 1208, 1482
TfiI GAWTC 2 cut(s) 319, 1240
Tru1I TTAA 7 cut(s) 9, 591, 704, 714, 855, 948, 1416
Tru9I TTAA 7 cut(s) 9, 591, 704, 714, 855, 948, 1416
TscAI CASTG 7 cut(s) 83, 284, 321, 675, 766, 1000, 1257
TseFI GTSAC 4 cut(s) 394, 979, 1138, 1248
TseI GCWGC 2 cut(s) 386, 1280
Tsp45I GTSAC 4 cut(s) 394, 979, 1138, 1248
TspDTI ATGAA 5 cut(s) 586, 644, 1048, 1182, 1339
TspGWI ACGGA 2 cut(s) 1208, 1246
TspRI CASTG 7 cut(s) 83, 284, 321, 675, 766, 1000, 1257
Tth111I GACNNNGTC 1 cut(s) 298
Vha464I CTTAAG 2 cut(s) 590, 703
VpaK11BI GGWCC 2 cut(s) 497, 524
VspI ATTAAT 2 cut(s) 9, 714
XapI RAATTY 2 cut(s) 1054, 1184
XbaI TCTAGA 1 cut(s) 1342
XceI RCATGY 1 cut(s) 1525
XcmI CCANNNNNNNNNTGG 1 cut(s) 446
XmiI GTMKAC 1 cut(s) 812
XspI CTAG 3 cut(s) 350, 801, 1343
ZraI GACGTC 1 cut(s) 300
Zsp2I ATGCAT 1 cut(s) 1337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.