AT4G33870

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
16234519 .. 16236492
1974 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G33870.1

Sequence Viewer

Length: 1215 bp
ATGAGGTTCCTCGGAGACTACAAGTTCGCTTTACTTACTTGCTCCGTTATCGCTCTCAGCATCTACTTCGCGATTAACGTCGAATTTCGTTTCGCGTACGATTCACCGGGAACTCGTACCGGAGTTAAGGTTTCCGAGAAATCTCCCTTCGACGACGAATTCATGTACATGTCAATCGCTGAAGATATCGATCGATCTTACCTCCACTACGATTACTACCGTGAATCTTGCCCTACCGCCGAGAAAATCATCGCGAAAGCTATCAGAGATATCTACAATGTCACACCCAGCGTAGCTCCGCCTATTATCCGTCTCCTCTTTCACGATTGCTTCATCGAGGGATGTGATGCATCAGTCCTTCTAGACGCAGATGAAGCACATACTTCTGAGAAAGATGCATCTCCAAACCTATCCTTGAAAGGGTTTGATGTGATTGACGCCGTTAAGTCTGAGCTAGAGAATGTCTGTCCCGGAGTTGTTTCCTGTGCTGACCTACTTGTATTGGCAGCTAGAGAAGCCGTCCTAGTTGCTGGTGGTCCATTCTATCCCCTAGAAACTGGAAGGAAGGATAGTGCAGCAGCCTACAGGGATTTTGCAGAACACGAGCTTCCTGCACCAGACGCTACTCTGTCGGTGATTCTTCAACGTTTTTCTTTCAGAGGATTCAACGAGAGAGAAACCGTCAGCTTATTCGGAGCACACAGCATTGGCATCACGCATTGCACATTTTTTAAGAACCGCCTCTACAACTTCTCAGCAACCGGGAAGCCTGATCCTGAACTCAATCCAGGGTTCCTCCAAGAACTGAAAACGAAATGCCCCTTCTCTGTCTCGACTTCATCTCCATCTGCTCCCCCTGACATTGGTTTACCACCGTCCTTACCTGCATCAGATTCCGAAAACAGCTACGGTATGAGCTCAGGAAACAGGAATGATGAAGTGATCGACTTGAGCTACAACAATGAAGGAGGTGATGAAAATTTTGGAACACGATACTTCCGAAGACTAATGCAGAATAAAGGGTTGATGTCTTCTGACCAGCAACTAATGGGTAGTGAAGTGACTGAGATGTGGGTGAGGGCATATGCTTCTGATCCGTTGTTGTTCCGCAGAGAATTTGCTATGTCAATGATGAAACTTTCAAGCTATAATGTCTTGACTGGTCCTCTAGGACAAGTGAGAACAAGCTGCTCAAAGGCCCTCCCCAGGAACTGA

Protein Analysis

404

Amino Acids

44.79

Weight (kDa)

4.99

Isoelectric Point (pI)

46.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 86 - 365 2.1e-72 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 892
AccII CGCG 3 cut(s) 71, 95, 254
AciI CCGC 4 cut(s) 237, 299, 739, 1108
AclI AACGTT 1 cut(s) 646
AclWI GGATC 2 cut(s) 767, 1088
AcsI RAATTY 4 cut(s) 83, 158, 979, 1115
AcuI CTGAAG 1 cut(s) 201
AcyI GRCGYC 1 cut(s) 438
AfaI GTAC 3 cut(s) 98, 118, 167
AfiI CCNNNNNNNGG 3 cut(s) 420, 863, 1206
AflIII ACRYGT 1 cut(s) 168
AgsI TTSAA 4 cut(s) 418, 644, 667, 1143
AjnI CCWGG 2 cut(s) 787, 1205
Alw21I GWGCWC 2 cut(s) 700, 920
Alw26I GTCTC 3 cut(s) 9, 317, 835
AlwI GGATC 2 cut(s) 767, 1088
AlwNI CAGNNNCTG 1 cut(s) 1212
AoxI GGCC 1 cut(s) 1197
ApeKI GCWGC 4 cut(s) 506, 575, 578, 1188
ApoI RAATTY 4 cut(s) 83, 158, 979, 1115
ArsI GACNNNNNNTTYG 2 cut(s) 8, 40
AspS9I GGNCC 3 cut(s) 536, 1163, 1198
AsuC2I CCSGG 3 cut(s) 108, 471, 763
AsuHPI GGTGA 4 cut(s) 96, 646, 983, 1087
AvaII GGWCC 2 cut(s) 536, 1163
BanII GRGCYC 1 cut(s) 920
BauI CACGAG 1 cut(s) 602
BbsI GAAGAC 2 cut(s) 1009, 1023
Bbv12I GWGCWC 2 cut(s) 700, 920
BbvI GCAGC 4 cut(s) 518, 587, 590, 1175
BccI CCATC 1 cut(s) 853
BceAI ACGGC 2 cut(s) 425, 503
BcgI CGANNNNNNTGC 4 cut(s) 49, 83, 593, 627
BciT130I CCWGG 2 cut(s) 789, 1207
BcnI CCSGG 3 cut(s) 108, 471, 763
BcoDI GTCTC 3 cut(s) 9, 317, 835
BfaI CTAG 6 cut(s) 362, 455, 510, 524, 551, 1169
BfmI CTRYAG 1 cut(s) 583
BfuAI ACCTGC 1 cut(s) 892
BisI GCNGC 4 cut(s) 507, 576, 579, 1189
BlsI GCNGC 4 cut(s) 508, 577, 580, 1190
Bme1390I CCNGG 5 cut(s) 108, 471, 763, 789, 1207
Bme18I GGWCC 2 cut(s) 536, 1163
BmgT120I GGNCC 3 cut(s) 536, 1163, 1198
BmiI GGNNCC 2 cut(s) 8, 794
BmrFI CCNGG 5 cut(s) 108, 471, 763, 789, 1207
BmsI GCATC 7 cut(s) 69, 337, 359, 385, 407, 720, 896
BpiI GAAGAC 2 cut(s) 1009, 1023
Bpu10I CCTNAGC 1 cut(s) 919
BpuEI CTTGAG 1 cut(s) 970
BpuMI CCSGG 3 cut(s) 108, 471, 763
Bsa29I ATCGAT 2 cut(s) 189, 193
BsaBI GATNNNNATC 1 cut(s) 189
BsaHI GRCGYC 1 cut(s) 438
BsaJI CCNNGG 3 cut(s) 10, 788, 1205
BsaWI WCCGGW 1 cut(s) 119
BsaXI ACNNNNNCTCC 4 cut(s) 114, 144, 826, 856
Bsc4I CCNNNNNNNGG 3 cut(s) 420, 863, 1206
Bse1I ACTGG 2 cut(s) 562, 1165
Bse3DI GCAATG 1 cut(s) 718
Bse8I GATNNNNATC 1 cut(s) 189
BseBI CCWGG 2 cut(s) 789, 1207
BseCI ATCGAT 2 cut(s) 189, 193
BseDI CCNNGG 3 cut(s) 10, 788, 1205
BseGI GGATG 1 cut(s) 347
BseJI GATNNNNATC 1 cut(s) 189
BseLI CCNNNNNNNGG 3 cut(s) 420, 863, 1206
BseMI GCAATG 1 cut(s) 718
BseMII CTCAG 6 cut(s) 70, 378, 441, 768, 933, 1056
BseNI ACTGG 2 cut(s) 562, 1165
BseRI GAGGAG 1 cut(s) 305
BseXI GCAGC 4 cut(s) 518, 587, 590, 1175
BseYI CCCAGC 1 cut(s) 287
BsgI GTGCAG 2 cut(s) 594, 597
Bsh1236I CGCG 3 cut(s) 71, 95, 254
Bsh1285I CGRYCG 1 cut(s) 193
BshFI GGCC 1 cut(s) 1199
BshVI ATCGAT 2 cut(s) 189, 193
BsiEI CGRYCG 1 cut(s) 193
BsiHKAI GWGCWC 2 cut(s) 700, 920
BsiSI CCGG 4 cut(s) 107, 120, 471, 762
BsiWI CGTACG 1 cut(s) 96
BslFI GGGAC 1 cut(s) 453
BslI CCNNNNNNNGG 3 cut(s) 420, 863, 1206
BsmAI GTCTC 3 cut(s) 9, 317, 835
BsmBI CGTCTC 1 cut(s) 317
BsmFI GGGAC 1 cut(s) 453
BsnI GGCC 1 cut(s) 1199
Bsp1286I GDGCHC 2 cut(s) 700, 920
Bsp1407I TGTACA 1 cut(s) 165
Bsp143I GATC 5 cut(s) 190, 194, 772, 942, 1093
Bsp68I TCGCGA 2 cut(s) 71, 254
BspACI CCGC 4 cut(s) 237, 299, 739, 1108
BspANI GGCC 1 cut(s) 1199
BspCNI CTCAG 6 cut(s) 69, 379, 442, 767, 932, 1057
BspDI ATCGAT 2 cut(s) 189, 193
BspFNI CGCG 3 cut(s) 71, 95, 254
BspLI GGNNCC 2 cut(s) 8, 794
BspMI ACCTGC 1 cut(s) 892
BspPI GGATC 2 cut(s) 767, 1088
BsrDI GCAATG 1 cut(s) 718
BsrGI TGTACA 1 cut(s) 165
BsrI ACTGG 2 cut(s) 562, 1165
BssECI CCNNGG 3 cut(s) 10, 788, 1205
BssMI GATC 5 cut(s) 190, 194, 772, 942, 1093
BssNI GRCGYC 1 cut(s) 438
BssSI CACGAG 1 cut(s) 602
Bst2BI CACGAG 1 cut(s) 602
Bst2UI CCWGG 2 cut(s) 789, 1207
Bst4CI ACNGT 4 cut(s) 221, 682, 876, 911
BstACI GRCGYC 1 cut(s) 438
BstAUI TGTACA 1 cut(s) 165
BstDEI CTNAG 6 cut(s) 56, 387, 450, 754, 919, 1065
BstF5I GGATG 1 cut(s) 347
BstFNI CGCG 3 cut(s) 71, 95, 254
BstKTI GATC 5 cut(s) 193, 197, 775, 945, 1096
BstMAI GTCTC 3 cut(s) 9, 317, 835
BstMBI GATC 5 cut(s) 190, 194, 772, 942, 1093
BstMCI CGRYCG 1 cut(s) 193
BstMWI GCNNNNNNNGC 3 cut(s) 374, 515, 620
BstNI CCWGG 2 cut(s) 789, 1207
BstNSI RCATGY 1 cut(s) 172
BstSCI CCNGG 5 cut(s) 106, 469, 761, 787, 1205
BstSFI CTRYAG 1 cut(s) 583
BstUI CGCG 3 cut(s) 71, 95, 254
BstV1I GCAGC 4 cut(s) 518, 587, 590, 1175
BstV2I GAAGAC 2 cut(s) 1009, 1023
Bsu15I ATCGAT 2 cut(s) 189, 193
BsuRI GGCC 1 cut(s) 1199
BsuTUI ATCGAT 2 cut(s) 189, 193
BtgZI GCGATG 1 cut(s) 235
BtsCI GGATG 1 cut(s) 347
BtuMI TCGCGA 2 cut(s) 71, 254
BveI ACCTGC 1 cut(s) 892
CaiI CAGNNNCTG 1 cut(s) 1212
Cfr13I GGNCC 3 cut(s) 536, 1163, 1198
ClaI ATCGAT 2 cut(s) 189, 193
CseI GACGC 3 cut(s) 374, 446, 629
Csp6I GTAC 3 cut(s) 97, 117, 166
CviAII CATG 2 cut(s) 163, 169
CviQI GTAC 3 cut(s) 97, 117, 166
DdeI CTNAG 6 cut(s) 56, 387, 450, 754, 919, 1065
DpnI GATC 5 cut(s) 192, 196, 774, 944, 1095
DpnII GATC 5 cut(s) 190, 194, 772, 942, 1093
EciI GGCGGA 1 cut(s) 288
Ecl136II GAGCTC 1 cut(s) 918
Eco24I GRGCYC 1 cut(s) 920
Eco32I GATATC 2 cut(s) 187, 271
Eco47I GGWCC 2 cut(s) 536, 1163
Eco53kI GAGCTC 1 cut(s) 918
Eco57I CTGAAG 1 cut(s) 201
EcoICRI GAGCTC 1 cut(s) 918
EcoO109I RGGNCCY 1 cut(s) 1198
EcoRI GAATTC 1 cut(s) 158
EcoRII CCWGG 2 cut(s) 787, 1205
EcoRV GATATC 2 cut(s) 187, 271
EcoT22I ATGCAT 2 cut(s) 352, 400
EcoT38I GRGCYC 1 cut(s) 920
Esp3I CGTCTC 1 cut(s) 317
FaeI CATG 2 cut(s) 166, 172
FaiI YATR 8 cut(s) 164, 170, 381, 914, 1084, 1086, 1124, 1149
FaqI GGGAC 1 cut(s) 453
FatI CATG 2 cut(s) 162, 168
FauNDI CATATG 1 cut(s) 1084
Fnu4HI GCNGC 4 cut(s) 507, 576, 579, 1189
FokI GGATG 1 cut(s) 354
FriOI GRGCYC 1 cut(s) 920
Fsp4HI GCNGC 4 cut(s) 507, 576, 579, 1189
FspBI CTAG 6 cut(s) 362, 455, 510, 524, 551, 1169
GluI GCNGC 4 cut(s) 507, 576, 579, 1189
GsaI CCCAGC 1 cut(s) 291
HaeIII GGCC 1 cut(s) 1199
HapII CCGG 4 cut(s) 107, 120, 471, 762
HgaI GACGC 3 cut(s) 374, 446, 629
Hin1I GRCGYC 1 cut(s) 438
Hin1II CATG 2 cut(s) 166, 172
HinfI GANTC 5 cut(s) 101, 224, 637, 663, 893
HpaII CCGG 4 cut(s) 107, 120, 471, 762
HphI GGTGA 4 cut(s) 96, 646, 983, 1087
Hpy166II GTNNAC 1 cut(s) 869
Hpy188III TCNNGA 8 cut(s) 70, 253, 323, 362, 776, 832, 921, 1156
Hpy8I GTNNAC 1 cut(s) 869
Hpy99I CGWCG 3 cut(s) 83, 155, 158
HpyAV CCTTC 6 cut(s) 157, 368, 555, 559, 832, 959
HpyCH4III ACNGT 4 cut(s) 221, 682, 876, 911
HpyCH4IV ACGT 2 cut(s) 78, 646
HpyCH4V TGCA 8 cut(s) 350, 398, 575, 596, 614, 723, 887, 1012
HpyF10VI GCNNNNNNNGC 3 cut(s) 374, 515, 620
HpyF3I CTNAG 6 cut(s) 56, 387, 450, 754, 919, 1065
HpySE526I ACGT 2 cut(s) 78, 646
Hsp92I GRCGYC 1 cut(s) 438
Hsp92II CATG 2 cut(s) 166, 172
Kzo9I GATC 5 cut(s) 190, 194, 772, 942, 1093
LmnI GCTCC 4 cut(s) 47, 301, 695, 856
Lsp1109I GCAGC 4 cut(s) 518, 587, 590, 1175
LweI GCATC 7 cut(s) 69, 337, 359, 385, 407, 720, 896
MaeI CTAG 6 cut(s) 362, 455, 510, 524, 551, 1169
MaeII ACGT 2 cut(s) 78, 646
MaeIII GTNAC 2 cut(s) 280, 1060
MalI GATC 5 cut(s) 192, 196, 774, 944, 1095
MboI GATC 5 cut(s) 190, 194, 772, 942, 1093
MboII GAAGA 4 cut(s) 194, 632, 1014, 1023
MhlI GDGCHC 2 cut(s) 700, 920
MluCI AATT 4 cut(s) 83, 158, 979, 1115
Mph1103I ATGCAT 2 cut(s) 352, 400
MseI TTAA 4 cut(s) 75, 126, 444, 732
MslI CAYNNNNRTG 1 cut(s) 167
MspI CCGG 4 cut(s) 107, 120, 471, 762
MspR9I CCNGG 5 cut(s) 108, 471, 763, 789, 1207
MvaI CCWGG 2 cut(s) 789, 1207
MvnI CGCG 3 cut(s) 71, 95, 254
MwoI GCNNNNNNNGC 3 cut(s) 374, 515, 620
NciI CCSGG 3 cut(s) 108, 471, 763
NdeI CATATG 1 cut(s) 1084
NdeII GATC 5 cut(s) 190, 194, 772, 942, 1093
NlaIII CATG 2 cut(s) 166, 172
NlaIV GGNNCC 2 cut(s) 8, 794
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 2 cut(s) 280, 1060
NruI TCGCGA 2 cut(s) 71, 254
NsiI ATGCAT 2 cut(s) 352, 400
NspI RCATGY 1 cut(s) 172
PciI ACATGT 1 cut(s) 168
PcsI WCGNNNNNNNCGW 2 cut(s) 75, 997
PfeI GAWTC 5 cut(s) 101, 224, 637, 663, 893
Pfl23II CGTACG 1 cut(s) 96
PfoI TCCNGGA 1 cut(s) 469
PkrI GCNGC 4 cut(s) 508, 577, 580, 1190
Ple19I CGATCG 1 cut(s) 193
PscI ACATGT 1 cut(s) 168
Psp124BI GAGCTC 1 cut(s) 920
Psp1406I AACGTT 1 cut(s) 646
Psp6I CCWGG 2 cut(s) 787, 1205
PspFI CCCAGC 1 cut(s) 287
PspGI CCWGG 2 cut(s) 787, 1205
PspLI CGTACG 1 cut(s) 96
PspN4I GGNNCC 2 cut(s) 8, 794
PspPI GGNCC 3 cut(s) 536, 1163, 1198
PsrI GAACNNNNNNTAC 2 cut(s) 728, 760
PstNI CAGNNNCTG 1 cut(s) 1212
PvuI CGATCG 1 cut(s) 193
RruI TCGCGA 2 cut(s) 71, 254
RsaI GTAC 3 cut(s) 98, 118, 167
RsaNI GTAC 3 cut(s) 97, 117, 166
RseI CAYNNNNRTG 1 cut(s) 167
SacI GAGCTC 1 cut(s) 920
SaqAI TTAA 4 cut(s) 75, 126, 444, 732
SatI GCNGC 4 cut(s) 507, 576, 579, 1189
Sau3AI GATC 5 cut(s) 190, 194, 772, 942, 1093
Sau96I GGNCC 3 cut(s) 536, 1163, 1198
ScrFI CCNGG 5 cut(s) 108, 471, 763, 789, 1207
SduI GDGCHC 2 cut(s) 700, 920
SfaNI GCATC 7 cut(s) 69, 337, 359, 385, 407, 720, 896
SfcI CTRYAG 1 cut(s) 583
SinI GGWCC 2 cut(s) 536, 1163
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 1 cut(s) 949
SmoI CTYRAG 1 cut(s) 949
Sse9I AATT 4 cut(s) 83, 158, 979, 1115
SsiI CCGC 4 cut(s) 237, 299, 739, 1108
SspMI CTAG 6 cut(s) 362, 455, 510, 524, 551, 1169
SstI GAGCTC 1 cut(s) 920
StyD4I CCNGG 5 cut(s) 106, 469, 761, 787, 1205
TaaI ACNGT 4 cut(s) 221, 682, 876, 911
TaiI ACGT 2 cut(s) 81, 649
TaqI TCGA 7 cut(s) 81, 150, 189, 193, 336, 833, 945
TasI AATT 4 cut(s) 83, 158, 979, 1115
TatI WGTACW 1 cut(s) 165
TfiI GAWTC 5 cut(s) 101, 224, 637, 663, 893
Tru1I TTAA 4 cut(s) 75, 126, 444, 732
Tru9I TTAA 4 cut(s) 75, 126, 444, 732
TseFI GTSAC 2 cut(s) 280, 1060
TseI GCWGC 4 cut(s) 506, 575, 578, 1188
Tsp45I GTSAC 2 cut(s) 280, 1060
TspDTI ATGAA 8 cut(s) 151, 322, 387, 828, 951, 978, 990, 1148
TspGWI ACGGA 3 cut(s) 34, 299, 1086
VpaK11BI GGWCC 2 cut(s) 536, 1163
XapI RAATTY 4 cut(s) 83, 158, 979, 1115
XbaI TCTAGA 1 cut(s) 361
XceI RCATGY 1 cut(s) 172
XspI CTAG 6 cut(s) 362, 455, 510, 524, 551, 1169
Zsp2I ATGCAT 2 cut(s) 352, 400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.