Rorug02G0319900

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
39131258 .. 39131998
741 bp
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UTR
Exon/CDS
Intron
Rorug02G0319900.1

Sequence Viewer

Length: 324 bp
ATGGGAGCAGCTTGGTTCAATGGTGCTTTTAGCAAGGTGGCAAAGGCAGGGCAGGCTGCAGGCACGAAAACCAGAGAAAAGTTCCATATGGCTGTGTCAAACTTGACTGCAAAGGTAATGCTTACAGACTTTGGCTACATGAAGAAAAGAAGAGGGAAGAAAGGGGAAGGAACAAAGATAGAAGAAAAGAAGGGGGAAGAAAGGGAAGGAGAAGGGAGAGGTGTAGAGATTGGGTCTCTCAAGGGCTGCGACACGAGTTATTGGGAAGACAATGAGAAAGTGTGCAGCGAAGTTCGATTTGTTGTTCAAGGAGGGTTGTGTTAG

Protein Analysis

107

Amino Acids

11.72

Weight (kDa)

9.19

Isoelectric Point (pI)

22.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 19, 308
AluBI AGCT 1 cut(s) 11
AluI AGCT 1 cut(s) 11
Alw26I GTCTC 1 cut(s) 240
ApeKI GCWGC 4 cut(s) 8, 56, 246, 285
BauI CACGAG 1 cut(s) 253
BbsI GAAGAC 1 cut(s) 273
BbvI GCAGC 4 cut(s) 20, 43, 233, 297
BcoDI GTCTC 1 cut(s) 240
BfmI CTRYAG 1 cut(s) 57
BisI GCNGC 4 cut(s) 9, 57, 247, 286
BlsI GCNGC 4 cut(s) 10, 58, 248, 287
BpiI GAAGAC 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 224
BsaI GGTCTC 1 cut(s) 240
BseXI GCAGC 4 cut(s) 20, 43, 233, 297
BsgI GTGCAG 1 cut(s) 304
BsmAI GTCTC 1 cut(s) 240
Bso31I GGTCTC 1 cut(s) 240
BspMAI CTGCAG 1 cut(s) 61
BspTNI GGTCTC 1 cut(s) 240
BssSI CACGAG 1 cut(s) 253
Bst2BI CACGAG 1 cut(s) 253
Bst6I CTCTTC 1 cut(s) 145
BstC8I GCNNGC 2 cut(s) 54, 61
BstMAI GTCTC 1 cut(s) 240
BstMWI GCNNNNNNNGC 1 cut(s) 53
BstSFI CTRYAG 1 cut(s) 57
BstV1I GCAGC 4 cut(s) 20, 43, 233, 297
BstV2I GAAGAC 1 cut(s) 273
Cac8I GCNNGC 2 cut(s) 54, 61
CviAII CATG 1 cut(s) 139
CviJI RGCY 5 cut(s) 11, 56, 92, 135, 246
CviKI_1 RGCY 5 cut(s) 11, 56, 92, 135, 246
Eam1104I CTCTTC 1 cut(s) 145
EarI CTCTTC 1 cut(s) 145
Eco31I GGTCTC 1 cut(s) 240
FaeI CATG 1 cut(s) 142
FaiI YATR 3 cut(s) 87, 89, 140
FatI CATG 1 cut(s) 138
FauNDI CATATG 1 cut(s) 87
Fnu4HI GCNGC 4 cut(s) 9, 57, 247, 286
Fsp4HI GCNGC 4 cut(s) 9, 57, 247, 286
GluI GCNGC 4 cut(s) 9, 57, 247, 286
Hin1II CATG 1 cut(s) 142
HpyAV CCTTC 4 cut(s) 161, 184, 200, 206
HpyCH4V TGCA 3 cut(s) 59, 110, 285
HpyF10VI GCNNNNNNNGC 1 cut(s) 53
Hsp92II CATG 1 cut(s) 142
LmnI GCTCC 1 cut(s) 5
LpnPI CCDG 4 cut(s) 33, 38, 45, 85
Lsp1109I GCAGC 4 cut(s) 20, 43, 233, 297
MboII GAAGA 6 cut(s) 154, 162, 169, 194, 209, 278
MnlI CCTC 3 cut(s) 146, 212, 305
MwoI GCNNNNNNNGC 1 cut(s) 53
NdeI CATATG 1 cut(s) 87
NlaIII CATG 1 cut(s) 142
PkrI GCNGC 4 cut(s) 10, 58, 248, 287
PstI CTGCAG 1 cut(s) 61
SatI GCNGC 4 cut(s) 9, 57, 247, 286
SetI ASST 4 cut(s) 13, 39, 117, 223
SfcI CTRYAG 1 cut(s) 57
SmlI CTYRAG 1 cut(s) 239
SmoI CTYRAG 1 cut(s) 239
TaqI TCGA 1 cut(s) 295
TseI GCWGC 4 cut(s) 8, 56, 246, 285
TspDTI ATGAA 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.