MD10G1206100.v1.1

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
30519595 .. 30522348
2754 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1206100.v1.1.491

Sequence Viewer

Length: 1194 bp
ATGAAAGGGTTGGCCTTTGCGATGGTGGTGATCTTCTCTGTGCTTCTGTCCCTGAACAATCCAAGAGGCGAATCGGAGAGAGCCTTTCTCTCTGTTTCCTCGCCCTCCTCCCAAGAACCACCGGTCAATCTGGTTTCTCTGGCTTCTACTAAAGATTTCTTCATGGAGATGACAGATGGTGAAGCCCAAAAAAACCTCGATTACGATTTTTACCGGGACACATGCCCAGAAGCTGAGACCATTGTGAGGGATACGATGGCGCAGATTTACTCACAGCAGAAGAATGTTTCTGCGCAGCTGCTGCGCCTCTTCTTCCACGACTGCTTCATTAAGGGCTGTGATGCTTCAGTCCTCTTGGATGACAGCAATGGGAATAAAAACCATTCTATTGAGAAGCAGGCTGTGCCAAATAAGTCCTTGAAGGGATTCGATAAAATTGACCAGATCAAGGAGGTGCTCGAAAATGTCTGTCCAGGGGTGGTATCTTGTGCTGACATACTTGCTCTTGCCACCAGAGATGGCATTGTCCTGGCCGATGGCCCCTTTTATCCGGTTTTCACTGGTAGAAGAGATAGTACCAGGTCCTACCCTGATGAAGCAATGGCTGAGATTCCTAAACCGGATGATAACATCACCCAGACACTTCGTCTGTTCTCACTAAGAGGATTTAGTGACCGAGAAACTGTAAGTCTTCTAGGGCACAACATTGGGAAGATTGGATGTGAGTTCATTCAGGCCCGGCTTAACAACTTTAAGGGGACCGGCAAACCAGACCCAACTGTTTCTCCTGGTTTCCAGAACGAGATGAGAATTTTCTGTGATGACAATGGAACCAGGAGCAGCCAGAATTCCCCTGCACCGGCGCCATCAAGGGGTGTGTTGAAGGAGAGGTCGTCAGGACGAAGGGGGATGCCATACTTCCAGCAGCTGTCTTCATCTATATCATCTGGAAGAGGCTTTGACACTCATTATTACCAGAGCTTGTTGAAGGGCAGAGGACTCCTCTTTGCTGATCAGCAACTGATGGCGAATGACAGGACTGCAAGGTTGGTCAGAGCTTATGCATCCGATGACGGTTCAACCTTCCGGATGGATTTTTCCAGGGCTATGATGAAGATGTCAGAGCGAAGGGGGCTCACCGGATCTGAAGGTCAGGTCAGGGTACACTGCTCTTTGCCACTGCAGACTTCTTAA

Protein Analysis

398

Amino Acids

43.98

Weight (kDa)

6.96

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 82 - 357 5.4e-68 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 294
AccB1I GGYRCC 1 cut(s) 862
AccIII TCCGGA 1 cut(s) 1086
AclWI GGATC 1 cut(s) 1150
AcoI YGGCCR 1 cut(s) 531
AcsI RAATTY 2 cut(s) 810, 847
AcuI CTGAAG 2 cut(s) 330, 1167
AcyI GRCGYC 1 cut(s) 863
AfaI GTAC 2 cut(s) 577, 1164
AfiI CCNNNNNNNGG 4 cut(s) 246, 448, 859, 872
AgeI ACCGGT 1 cut(s) 121
AgsI TTSAA 4 cut(s) 421, 883, 988, 1080
AhdI GACNNNNNGTC 1 cut(s) 645
AjnI CCWGG 6 cut(s) 472, 528, 578, 787, 833, 1100
AluBI AGCT 5 cut(s) 233, 298, 928, 981, 1058
AluI AGCT 5 cut(s) 233, 298, 928, 981, 1058
Alw21I GWGCWC 1 cut(s) 459
Alw26I GTCTC 1 cut(s) 230
AlwI GGATC 1 cut(s) 1150
AlwNI CAGNNNCTG 4 cut(s) 233, 301, 928, 1021
Aor13HI TCCGGA 1 cut(s) 1086
AoxI GGCC 4 cut(s) 12, 531, 538, 735
ApeKI GCWGC 5 cut(s) 295, 298, 301, 840, 925
ApoI RAATTY 2 cut(s) 810, 847
AsiGI ACCGGT 1 cut(s) 121
Asp700I GAANNNNTTC 1 cut(s) 425
AspLEI GCGC 4 cut(s) 262, 295, 306, 865
AspS9I GGNCC 4 cut(s) 539, 582, 736, 759
AsuC2I CCSGG 2 cut(s) 215, 739
AsuHPI GGTGA 4 cut(s) 40, 191, 625, 1129
AvaII GGWCC 2 cut(s) 582, 759
BaeGI GKGCMC 1 cut(s) 702
BanI GGYRCC 1 cut(s) 862
BanII GRGCYC 1 cut(s) 1137
BarI GAAGNNNNNNTAC 2 cut(s) 559, 591
BbsI GAAGAC 2 cut(s) 683, 924
Bbv12I GWGCWC 1 cut(s) 459
BbvI GCAGC 5 cut(s) 285, 288, 307, 852, 937
BccI CCATC 8 cut(s) 16, 170, 250, 512, 530, 874, 1018, 1084
BciT130I CCWGG 6 cut(s) 474, 530, 580, 789, 835, 1102
BciVI GTATCC 1 cut(s) 244
BclI TGATCA 1 cut(s) 1012
BcnI CCSGG 2 cut(s) 215, 739
BcoDI GTCTC 1 cut(s) 230
BfaI CTAG 1 cut(s) 695
BfmI CTRYAG 1 cut(s) 1181
BfoI RGCGCY 1 cut(s) 866
BfuI GTATCC 1 cut(s) 244
BisI GCNGC 5 cut(s) 296, 299, 302, 841, 926
BlsI GCNGC 5 cut(s) 297, 300, 303, 842, 927
Bme1390I CCNGG 8 cut(s) 215, 474, 530, 580, 739, 789, 835, 1102
Bme18I GGWCC 2 cut(s) 582, 759
BmeRI GACNNNNNGTC 1 cut(s) 645
BmgT120I GGNCC 4 cut(s) 539, 582, 736, 759
BmiI GGNNCC 4 cut(s) 541, 760, 832, 864
BmrFI CCNGG 8 cut(s) 215, 474, 530, 580, 739, 789, 835, 1102
BmsI GCATC 3 cut(s) 331, 900, 1073
BpiI GAAGAC 2 cut(s) 683, 924
BplI GAGNNNNNCTC 4 cut(s) 72, 104, 987, 1019
BpuMI CCSGG 2 cut(s) 215, 739
BsaHI GRCGYC 1 cut(s) 863
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 2 cut(s) 473, 1101
BsaWI WCCGGW 5 cut(s) 121, 550, 619, 1086, 1139
BsaXI ACNNNNNCTCC 4 cut(s) 769, 799, 878, 908
Bsc4I CCNNNNNNNGG 4 cut(s) 246, 448, 859, 872
Bse118I RCCGGY 3 cut(s) 121, 761, 859
Bse1I ACTGG 1 cut(s) 565
Bse3DI GCAATG 2 cut(s) 373, 606
BseAI TCCGGA 1 cut(s) 1086
BseBI CCWGG 6 cut(s) 474, 530, 580, 789, 835, 1102
BseDI CCNNGG 2 cut(s) 473, 1101
BseGI GGATG 6 cut(s) 364, 628, 725, 915, 1064, 1095
BseLI CCNNNNNNNGG 4 cut(s) 246, 448, 859, 872
BseMI GCAATG 2 cut(s) 373, 606
BseMII CTCAG 2 cut(s) 225, 597
BseNI ACTGG 1 cut(s) 565
BseRI GAGGAG 2 cut(s) 97, 992
BseSI GKGCMC 1 cut(s) 702
BseXI GCAGC 5 cut(s) 285, 288, 307, 852, 937
BsgI GTGCAG 1 cut(s) 840
BshFI GGCC 4 cut(s) 14, 533, 540, 737
BshNI GGYRCC 1 cut(s) 862
BshTI ACCGGT 1 cut(s) 121
BsiHKAI GWGCWC 1 cut(s) 459
BsiSI CCGG 9 cut(s) 122, 214, 551, 620, 739, 762, 860, 1087, 1140
BslFI GGGAC 3 cut(s) 34, 230, 772
BslI CCNNNNNNNGG 4 cut(s) 246, 448, 859, 872
BsmAI GTCTC 1 cut(s) 230
BsmFI GGGAC 3 cut(s) 34, 230, 772
BsnI GGCC 4 cut(s) 14, 533, 540, 737
Bso31I GGTCTC 1 cut(s) 230
Bsp1286I GDGCHC 3 cut(s) 459, 702, 1137
Bsp13I TCCGGA 1 cut(s) 1086
Bsp143I GATC 4 cut(s) 30, 444, 1012, 1142
BspANI GGCC 4 cut(s) 14, 533, 540, 737
BspCNI CTCAG 2 cut(s) 226, 598
BspEI TCCGGA 1 cut(s) 1086
BspLI GGNNCC 4 cut(s) 541, 760, 832, 864
BspMAI CTGCAG 1 cut(s) 1185
BspPI GGATC 1 cut(s) 1150
BspT107I GGYRCC 1 cut(s) 862
BspTNI GGTCTC 1 cut(s) 230
BsrDI GCAATG 2 cut(s) 373, 606
BsrFI RCCGGY 3 cut(s) 121, 761, 859
BsrI ACTGG 1 cut(s) 565
BssAI RCCGGY 3 cut(s) 121, 761, 859
BssECI CCNNGG 2 cut(s) 473, 1101
BssMI GATC 4 cut(s) 30, 444, 1012, 1142
BssNI GRCGYC 1 cut(s) 863
Bst2UI CCWGG 6 cut(s) 474, 530, 580, 789, 835, 1102
Bst4CI ACNGT 3 cut(s) 685, 781, 1076
Bst6I CTCTTC 3 cut(s) 314, 562, 946
BstACI GRCGYC 1 cut(s) 863
BstAPI GCANNNNNTGC 2 cut(s) 301, 403
BstC8I GCNNGC 1 cut(s) 399
BstDEI CTNAG 3 cut(s) 234, 606, 659
BstF5I GGATG 6 cut(s) 364, 628, 725, 915, 1064, 1095
BstH2I RGCGCY 1 cut(s) 866
BstHHI GCGC 4 cut(s) 262, 295, 306, 865
BstKTI GATC 4 cut(s) 33, 447, 1015, 1145
BstMAI GTCTC 1 cut(s) 230
BstMBI GATC 4 cut(s) 30, 444, 1012, 1142
BstMWI GCNNNNNNNGC 3 cut(s) 301, 403, 1132
BstNI CCWGG 6 cut(s) 474, 530, 580, 789, 835, 1102
BstNSI RCATGY 1 cut(s) 225
BstSCI CCNGG 8 cut(s) 213, 472, 528, 578, 737, 787, 833, 1100
BstSFI CTRYAG 1 cut(s) 1181
BstSLI GKGCMC 1 cut(s) 702
BstV1I GCAGC 5 cut(s) 285, 288, 307, 852, 937
BstV2I GAAGAC 2 cut(s) 683, 924
BstX2I RGATCY 1 cut(s) 1142
BstYI RGATCY 1 cut(s) 1142
BsuI GTATCC 1 cut(s) 244
BsuRI GGCC 4 cut(s) 14, 533, 540, 737
BtgZI GCGATG 1 cut(s) 35
BtsCI GGATG 6 cut(s) 364, 628, 725, 915, 1064, 1095
BtsI GCAGTG 2 cut(s) 1165, 1178
BtsIMutI CAGTG 3 cut(s) 558, 1165, 1178
Cac8I GCNNGC 1 cut(s) 399
CaiI CAGNNNCTG 4 cut(s) 233, 301, 928, 1021
CfoI GCGC 4 cut(s) 262, 295, 306, 865
Cfr10I RCCGGY 3 cut(s) 121, 761, 859
Cfr13I GGNCC 4 cut(s) 539, 582, 736, 759
CsiI ACCWGGT 1 cut(s) 578
Csp6I GTAC 2 cut(s) 576, 1163
CspAI ACCGGT 1 cut(s) 121
CviAII CATG 2 cut(s) 163, 222
CviQI GTAC 2 cut(s) 576, 1163
DdeI CTNAG 3 cut(s) 234, 606, 659
DinI GGCGCC 1 cut(s) 864
DpnI GATC 4 cut(s) 32, 446, 1014, 1144
DpnII GATC 4 cut(s) 30, 444, 1012, 1142
DriI GACNNNNNGTC 1 cut(s) 645
EaeI YGGCCR 1 cut(s) 531
Eam1104I CTCTTC 3 cut(s) 314, 562, 946
Eam1105I GACNNNNNGTC 1 cut(s) 645
EarI CTCTTC 3 cut(s) 314, 562, 946
Eco24I GRGCYC 1 cut(s) 1137
Eco31I GGTCTC 1 cut(s) 230
Eco47I GGWCC 2 cut(s) 582, 759
Eco57I CTGAAG 2 cut(s) 330, 1167
EcoO109I RGGNCCY 1 cut(s) 582
EcoRI GAATTC 1 cut(s) 847
EcoRII CCWGG 6 cut(s) 472, 528, 578, 787, 833, 1100
EcoT22I ATGCAT 1 cut(s) 1066
EcoT38I GRGCYC 1 cut(s) 1137
EgeI GGCGCC 1 cut(s) 864
EheI GGCGCC 1 cut(s) 864
FaeI CATG 2 cut(s) 166, 225
FaiI YATR 7 cut(s) 164, 223, 497, 916, 941, 1062, 1109
FaqI GGGAC 3 cut(s) 34, 230, 772
FatI CATG 2 cut(s) 162, 221
FbaI TGATCA 1 cut(s) 1012
Fnu4HI GCNGC 5 cut(s) 296, 299, 302, 841, 926
FokI GGATG 6 cut(s) 371, 635, 732, 922, 1051, 1102
FriOI GRGCYC 1 cut(s) 1137
Fsp4HI GCNGC 5 cut(s) 296, 299, 302, 841, 926
FspBI CTAG 1 cut(s) 695
FspI TGCGCA 1 cut(s) 294
GlaI GCGC 4 cut(s) 261, 294, 305, 864
GluI GCNGC 5 cut(s) 296, 299, 302, 841, 926
HaeII RGCGCY 1 cut(s) 866
HaeIII GGCC 4 cut(s) 14, 533, 540, 737
HapII CCGG 9 cut(s) 122, 214, 551, 620, 739, 762, 860, 1087, 1140
HhaI GCGC 4 cut(s) 262, 295, 306, 865
Hin1I GRCGYC 1 cut(s) 863
Hin1II CATG 2 cut(s) 166, 225
Hin6I GCGC 4 cut(s) 260, 293, 304, 863
HinP1I GCGC 4 cut(s) 260, 293, 304, 863
HinfI GANTC 4 cut(s) 71, 426, 610, 999
HpaII CCGG 9 cut(s) 122, 214, 551, 620, 739, 762, 860, 1087, 1140
HphI GGTGA 4 cut(s) 40, 191, 625, 1129
Hpy166II GTNNAC 1 cut(s) 1165
Hpy188I TCNGA 5 cut(s) 76, 1055, 1069, 1123, 1147
Hpy188III TCNNGA 4 cut(s) 796, 897, 948, 1087
Hpy8I GTNNAC 1 cut(s) 1165
HpyAV CCTTC 7 cut(s) 415, 877, 897, 982, 1093, 1122, 1142
HpyCH4III ACNGT 3 cut(s) 685, 781, 1076
HpyCH4V TGCA 4 cut(s) 857, 1043, 1064, 1183
HpyF10VI GCNNNNNNNGC 3 cut(s) 301, 403, 1132
HpyF3I CTNAG 3 cut(s) 234, 606, 659
Hsp92I GRCGYC 1 cut(s) 863
Hsp92II CATG 2 cut(s) 166, 225
HspAI GCGC 4 cut(s) 260, 293, 304, 863
KasI GGCGCC 1 cut(s) 862
Kpn2I TCCGGA 1 cut(s) 1086
Ksp22I TGATCA 1 cut(s) 1012
Kzo9I GATC 4 cut(s) 30, 444, 1012, 1142
LmnI GCTCC 1 cut(s) 837
Lsp1109I GCAGC 5 cut(s) 285, 288, 307, 852, 937
LweI GCATC 3 cut(s) 331, 900, 1073
MabI ACCWGGT 1 cut(s) 578
MaeI CTAG 1 cut(s) 695
MaeIII GTNAC 1 cut(s) 671
MalI GATC 4 cut(s) 32, 446, 1014, 1144
MboI GATC 4 cut(s) 30, 444, 1012, 1142
MflI RGATCY 1 cut(s) 1142
MhlI GDGCHC 3 cut(s) 459, 702, 1137
MluCI AATT 3 cut(s) 435, 810, 847
Mly113I GGCGCC 1 cut(s) 863
MlyI GAGTC 1 cut(s) 993
Mph1103I ATGCAT 1 cut(s) 1066
MroI TCCGGA 1 cut(s) 1086
MroXI GAANNNNTTC 1 cut(s) 425
MseI TTAA 4 cut(s) 330, 744, 753, 1192
MslI CAYNNNNRTG 1 cut(s) 167
MspA1I CMGCKG 2 cut(s) 298, 928
MspI CCGG 9 cut(s) 122, 214, 551, 620, 739, 762, 860, 1087, 1140
MspR9I CCNGG 8 cut(s) 215, 474, 530, 580, 739, 789, 835, 1102
MvaI CCWGG 6 cut(s) 474, 530, 580, 789, 835, 1102
MwoI GCNNNNNNNGC 3 cut(s) 301, 403, 1132
NarI GGCGCC 1 cut(s) 863
NciI CCSGG 2 cut(s) 215, 739
NdeII GATC 4 cut(s) 30, 444, 1012, 1142
NlaIII CATG 2 cut(s) 166, 225
NlaIV GGNNCC 4 cut(s) 541, 760, 832, 864
NmuCI GTSAC 1 cut(s) 671
NsbI TGCGCA 1 cut(s) 294
NsiI ATGCAT 1 cut(s) 1066
NspI RCATGY 1 cut(s) 225
PdmI GAANNNNTTC 1 cut(s) 425
PfeI GAWTC 3 cut(s) 71, 426, 610
PinAI ACCGGT 1 cut(s) 121
PkrI GCNGC 5 cut(s) 297, 300, 303, 842, 927
PleI GAGTC 1 cut(s) 993
PluTI GGCGCC 1 cut(s) 866
PpsI GAGTC 1 cut(s) 993
PpuMI RGGWCCY 1 cut(s) 582
Psp5II RGGWCCY 1 cut(s) 582
Psp6I CCWGG 6 cut(s) 472, 528, 578, 787, 833, 1100
PspGI CCWGG 6 cut(s) 472, 528, 578, 787, 833, 1100
PspN4I GGNNCC 4 cut(s) 541, 760, 832, 864
PspPI GGNCC 4 cut(s) 539, 582, 736, 759
PspPPI RGGWCCY 1 cut(s) 582
PstI CTGCAG 1 cut(s) 1185
PstNI CAGNNNCTG 4 cut(s) 233, 301, 928, 1021
PsuI RGATCY 1 cut(s) 1142
PvuII CAGCTG 2 cut(s) 298, 928
RsaI GTAC 2 cut(s) 577, 1164
RsaNI GTAC 2 cut(s) 576, 1163
RseI CAYNNNNRTG 1 cut(s) 167
SaqAI TTAA 4 cut(s) 330, 744, 753, 1192
SatI GCNGC 5 cut(s) 296, 299, 302, 841, 926
Sau3AI GATC 4 cut(s) 30, 444, 1012, 1142
Sau96I GGNCC 4 cut(s) 539, 582, 736, 759
SchI GAGTC 1 cut(s) 993
ScrFI CCNGG 8 cut(s) 215, 474, 530, 580, 739, 789, 835, 1102
SduI GDGCHC 3 cut(s) 459, 702, 1137
SexAI ACCWGGT 1 cut(s) 578
SfaNI GCATC 3 cut(s) 331, 900, 1073
SfcI CTRYAG 1 cut(s) 1181
SfoI GGCGCC 1 cut(s) 864
SgrAI CRCCGGYG 1 cut(s) 859
SinI GGWCC 2 cut(s) 582, 759
SmiMI CAYNNNNRTG 1 cut(s) 167
Sse9I AATT 3 cut(s) 435, 810, 847
SspDI GGCGCC 1 cut(s) 862
SspMI CTAG 1 cut(s) 695
StyD4I CCNGG 8 cut(s) 213, 472, 528, 578, 737, 787, 833, 1100
TaaI ACNGT 3 cut(s) 685, 781, 1076
TaqI TCGA 3 cut(s) 198, 429, 459
TaqII GACCGA 1 cut(s) 690
TasI AATT 3 cut(s) 435, 810, 847
TfiI GAWTC 3 cut(s) 71, 426, 610
Tru1I TTAA 4 cut(s) 330, 744, 753, 1192
Tru9I TTAA 4 cut(s) 330, 744, 753, 1192
TscAI CASTG 3 cut(s) 565, 1172, 1185
TseFI GTSAC 1 cut(s) 671
TseI GCWGC 5 cut(s) 295, 298, 301, 840, 925
Tsp45I GTSAC 1 cut(s) 671
TspDTI ATGAA 7 cut(s) 17, 151, 316, 609, 718, 924, 1127
TspRI CASTG 3 cut(s) 565, 1172, 1185
VpaK11BI GGWCC 2 cut(s) 582, 759
XapI RAATTY 2 cut(s) 810, 847
XceI RCATGY 1 cut(s) 225
XmnI GAANNNNTTC 1 cut(s) 425
XspI CTAG 1 cut(s) 695
Zsp2I ATGCAT 1 cut(s) 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.