RchiOBHm_Chr7g0229481

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
53027439 .. 53028492
1054 bp
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UTR
Exon/CDS
Intron
PRQ20556

Sequence Viewer

Length: 135 bp
ATGGCTTGGATTTACGGCCAACAGAGGAATGTCTCGACTCAGTTGCTGCGTCTCTTTTTCCATGACTTCATTGAGGAGGAAGCTTTTTGTGAAATGGACCGTAATGCCAATTGGGATTTGGTAAATGAGAGTTGA

Protein Analysis

44

Amino Acids

5.37

Weight (kDa)

4.33

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 16
AluBI AGCT 1 cut(s) 83
AluI AGCT 1 cut(s) 83
Alw26I GTCTC 2 cut(s) 37, 56
AlwNI CAGNNNCTG 1 cut(s) 46
AoxI GGCC 1 cut(s) 16
ApeKI GCWGC 1 cut(s) 46
AspS9I GGNCC 1 cut(s) 97
AvaII GGWCC 1 cut(s) 97
BbvI GCAGC 1 cut(s) 33
BceAI ACGGC 1 cut(s) 31
BcgI CGANNNNNNTGC 2 cut(s) 25, 59
BcoDI GTCTC 2 cut(s) 37, 56
BisI GCNGC 1 cut(s) 47
BlsI GCNGC 1 cut(s) 48
Bme18I GGWCC 1 cut(s) 97
BmgT120I GGNCC 1 cut(s) 97
BseMII CTCAG 1 cut(s) 53
BseRI GAGGAG 1 cut(s) 89
BseXI GCAGC 1 cut(s) 33
BshFI GGCC 1 cut(s) 18
BsmAI GTCTC 2 cut(s) 37, 56
BsmBI CGTCTC 1 cut(s) 56
BsnI GGCC 1 cut(s) 18
BspANI GGCC 1 cut(s) 18
BspCNI CTCAG 1 cut(s) 52
Bst4CI ACNGT 1 cut(s) 101
BstDEI CTNAG 1 cut(s) 39
BstMAI GTCTC 2 cut(s) 37, 56
BstV1I GCAGC 1 cut(s) 33
BsuRI GGCC 1 cut(s) 18
CaiI CAGNNNCTG 1 cut(s) 46
Cfr13I GGNCC 1 cut(s) 97
CseI GACGC 1 cut(s) 38
CviAII CATG 1 cut(s) 62
CviJI RGCY 3 cut(s) 5, 18, 83
CviKI_1 RGCY 3 cut(s) 5, 18, 83
DdeI CTNAG 1 cut(s) 39
EaeI YGGCCR 1 cut(s) 16
Eco47I GGWCC 1 cut(s) 97
Esp3I CGTCTC 1 cut(s) 56
FaeI CATG 1 cut(s) 65
FaiI YATR 1 cut(s) 63
FatI CATG 1 cut(s) 61
Fnu4HI GCNGC 1 cut(s) 47
Fsp4HI GCNGC 1 cut(s) 47
GluI GCNGC 1 cut(s) 47
HaeIII GGCC 1 cut(s) 18
HgaI GACGC 1 cut(s) 38
Hin1II CATG 1 cut(s) 65
HindIII AAGCTT 1 cut(s) 81
HinfI GANTC 1 cut(s) 37
Hpy188III TCNNGA 1 cut(s) 34
HpyCH4III ACNGT 1 cut(s) 101
HpyF3I CTNAG 1 cut(s) 39
Hsp92II CATG 1 cut(s) 65
Lsp1109I GCAGC 1 cut(s) 33
MfeI CAATTG 1 cut(s) 109
MluCI AATT 1 cut(s) 109
MlyI GAGTC 1 cut(s) 31
MnlI CCTC 3 cut(s) 18, 67, 70
MunI CAATTG 1 cut(s) 109
NlaIII CATG 1 cut(s) 65
PkrI GCNGC 1 cut(s) 48
PleI GAGTC 1 cut(s) 31
PpsI GAGTC 1 cut(s) 31
PspPI GGNCC 1 cut(s) 97
PstNI CAGNNNCTG 1 cut(s) 46
SatI GCNGC 1 cut(s) 47
Sau96I GGNCC 1 cut(s) 97
SchI GAGTC 1 cut(s) 31
SetI ASST 1 cut(s) 85
SgeI CNNG 3 cut(s) 18, 46, 74
SinI GGWCC 1 cut(s) 97
Sse9I AATT 1 cut(s) 109
TaaI ACNGT 1 cut(s) 101
TaqI TCGA 1 cut(s) 35
TasI AATT 1 cut(s) 109
TseI GCWGC 1 cut(s) 46
TspDTI ATGAA 1 cut(s) 58
VpaK11BI GGWCC 1 cut(s) 97
XcmI CCANNNNNNNNNTGG 1 cut(s) 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.