AT5G07410

aspartyl esterase activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
2345758 .. 2347565
1808 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G07410.1

Sequence Viewer

Length: 1086 bp
ATGAGATACACAAATGTGTCCATTTTATTAGGCATGTTGGTGATCTTTGTTTCACCAATGGTGTTCGCAGATGATTTGACACCAATCCCAGAGGGCAAACCCCAAGTGGTGCAGTGGTTCAATACCCACGTTGGTCCATTGGCTCAACGTAAAGGCTTAGATCCTGCTCTCGTAGCTGCTGAGGCTGCTCCACGTATCATCAACGTGAATCCAAAGGGAGGTGAATTCAAAACACTAACAGACGCAATAAAGAGCGTTCCCGCAGGGAACACAAAGCGGGTGATCATAAAGATGGCTCATGGTGAGTACAGAGAGAAGGTCACTATCGACAGGAACAAACCCTTCATTACATTGATGGGACAACCCAATGCCATGCCTGTTATCACCTACGACGGTACCGCCGCCAAGTATGGAACCGTTGATAGTGCCTCTCTCATTATCTTATCCGACTATTTCATGGCCGTTAACATCGTCGTTAAGAACACTGCACCGGCACCAGATGGTAAAACTAAGGGAGCACAAGCCTTATCCATGAGAATCTCCGGAAACTTTGCTGCTTTCTACAACTGCAAATTCTACGGTTTCCAAGATACAATCTGTGATGATACCGGAAACCATTTCTTCAAGGATTGTTACGTCGAAGGAACATTCGATTTCATCTTCGGAAGTGGAACCTCTATGTACTTGGGAACACAATTGCACGTGGTTGGAGACGGTATTAGAGTGATCGCAGCGCATGCAGGAAAGAGCGCAGAAGAAAAGAGTGGATACTCTTTCGTGCACTGCAAGGTGACTGGAACTGGAGGAGGAATCTATTTGGGAAGAGCATGGATGAGCCACCCTAAGGTTGTCTATGCCTACACCGAGATGACCAGCGTTGTCAACCCCACCGGATGGCAAGAAAACAAGACTCCCGCACATGACAAGACCGTGTTCTACGGAGAGTACAAGTGTTCAGGACCAGGGTCACACAAAGCCAAGAGAGTGCCATTCACACAAGACATCGACGACAAAGAAGCTAACTGTTTCCTATCCCTCGGCTACATCCAAGGATCCAAGTGGCTTCTCCCACCACCCGCTTTGTAA

Protein Analysis

361

Amino Acids

39.34

Weight (kDa)

8.7

Isoelectric Point (pI)

24.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pectinesterase PF01095 73 - 351 2.8e-55 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 395
AccB1I GGYRCC 2 cut(s) 395, 493
AccB7I CCANNNNNTGG 1 cut(s) 894
AccIII TCCGGA 1 cut(s) 542
AciI CCGC 6 cut(s) 261, 277, 399, 402, 915, 1077
AclWI GGATC 3 cut(s) 155, 1047, 1060
AcoI YGGCCR 1 cut(s) 459
AcsI RAATTY 2 cut(s) 224, 572
AcvI CACGTG 1 cut(s) 703
AfaI GTAC 4 cut(s) 308, 397, 683, 947
AfiI CCNNNNNNNGG 3 cut(s) 218, 844, 894
AgsI TTSAA 3 cut(s) 121, 229, 625
AjnI CCWGG 1 cut(s) 961
AleI CACNNNNGTG 1 cut(s) 14
AluBI AGCT 2 cut(s) 176, 1019
AluI AGCT 2 cut(s) 176, 1019
Alw21I GWGCWC 2 cut(s) 520, 783
Alw26I GTCTC 1 cut(s) 705
Alw44I GTGCAC 1 cut(s) 779
AlwI GGATC 3 cut(s) 155, 1047, 1060
Aor13HI TCCGGA 1 cut(s) 542
AoxI GGCC 1 cut(s) 459
ApaLI GTGCAC 1 cut(s) 779
ApeKI GCWGC 4 cut(s) 176, 185, 554, 731
ApoI RAATTY 2 cut(s) 224, 572
Asp718I GGTACC 1 cut(s) 395
AspLEI GCGC 2 cut(s) 736, 752
AspS9I GGNCC 2 cut(s) 134, 959
AsuHPI GGTGA 7 cut(s) 45, 52, 233, 292, 314, 376, 802
AvaII GGWCC 2 cut(s) 134, 959
AxyI CCTNAGG 1 cut(s) 843
BaeGI GKGCMC 1 cut(s) 783
BaeI ACNNNNGTAYC 2 cut(s) 379, 412
BamHI GGATCC 1 cut(s) 1052
BanI GGYRCC 2 cut(s) 395, 493
BbrPI CACGTG 1 cut(s) 703
Bbv12I GWGCWC 2 cut(s) 520, 783
BbvCI CCTCAGC 1 cut(s) 180
BbvI GCAGC 4 cut(s) 163, 172, 541, 743
BccI CCATC 4 cut(s) 286, 349, 494, 888
BceAI ACGGC 1 cut(s) 446
BciT130I CCWGG 1 cut(s) 963
BciVI GTATCC 1 cut(s) 761
BclI TGATCA 1 cut(s) 282
BcoDI GTCTC 1 cut(s) 705
BfuI GTATCC 1 cut(s) 761
BisI GCNGC 5 cut(s) 177, 186, 402, 555, 732
BlsI GCNGC 5 cut(s) 178, 187, 403, 556, 733
Bme1390I CCNGG 1 cut(s) 963
Bme18I GGWCC 2 cut(s) 134, 959
BmgT120I GGNCC 2 cut(s) 134, 959
BmiI GGNNCC 5 cut(s) 397, 415, 495, 673, 1054
BmrFI CCNGG 1 cut(s) 963
BoxI GACNNNNGTC 1 cut(s) 964
BpmI CTGGAG 1 cut(s) 822
Bpu10I CCTNAGC 1 cut(s) 180
BsaAI YACGTR 2 cut(s) 194, 703
BsaJI CCNNGG 3 cut(s) 962, 1036, 1048
BsaWI WCCGGW 3 cut(s) 542, 608, 890
Bsc4I CCNNNNNNNGG 3 cut(s) 218, 844, 894
Bse118I RCCGGY 1 cut(s) 490
Bse1I ACTGG 2 cut(s) 799, 805
Bse21I CCTNAGG 1 cut(s) 843
BseAI TCCGGA 1 cut(s) 542
BseBI CCWGG 1 cut(s) 963
BseDI CCNNGG 3 cut(s) 962, 1036, 1048
BseGI GGATG 3 cut(s) 837, 899, 1044
BseLI CCNNNNNNNGG 3 cut(s) 218, 844, 894
BseMII CTCAG 1 cut(s) 171
BseNI ACTGG 2 cut(s) 799, 805
BseRI GAGGAG 1 cut(s) 819
BseSI GKGCMC 1 cut(s) 783
BseXI GCAGC 4 cut(s) 163, 172, 541, 743
BsgI GTGCAG 2 cut(s) 131, 471
BshFI GGCC 1 cut(s) 461
BshNI GGYRCC 2 cut(s) 395, 493
BsiHKAI GWGCWC 2 cut(s) 520, 783
BsiSI CCGG 4 cut(s) 491, 543, 609, 891
BslFI GGGAC 1 cut(s) 372
BslI CCNNNNNNNGG 3 cut(s) 218, 844, 894
BsmAI GTCTC 1 cut(s) 705
BsmBI CGTCTC 1 cut(s) 705
BsmFI GGGAC 1 cut(s) 372
BsnI GGCC 1 cut(s) 461
Bsp1286I GDGCHC 2 cut(s) 520, 783
Bsp13I TCCGGA 1 cut(s) 542
Bsp143I GATC 5 cut(s) 42, 160, 282, 726, 1052
BspACI CCGC 6 cut(s) 261, 277, 399, 402, 915, 1077
BspANI GGCC 1 cut(s) 461
BspCNI CTCAG 1 cut(s) 172
BspEI TCCGGA 1 cut(s) 542
BspLI GGNNCC 5 cut(s) 397, 415, 495, 673, 1054
BspPI GGATC 3 cut(s) 155, 1047, 1060
BspQI GCTCTTC 1 cut(s) 817
BspT107I GGYRCC 2 cut(s) 395, 493
BsrFI RCCGGY 1 cut(s) 490
BsrI ACTGG 2 cut(s) 799, 805
BssAI RCCGGY 1 cut(s) 490
BssECI CCNNGG 3 cut(s) 962, 1036, 1048
BssMI GATC 5 cut(s) 42, 160, 282, 726, 1052
BssT1I CCWWGG 1 cut(s) 1048
Bst2UI CCWGG 1 cut(s) 963
Bst4CI ACNGT 6 cut(s) 395, 418, 581, 716, 931, 1025
Bst6I CTCTTC 1 cut(s) 817
BstAPI GCANNNNNTGC 1 cut(s) 737
BstBAI YACGTR 2 cut(s) 194, 703
BstC8I GCNNGC 1 cut(s) 738
BstDEI CTNAG 4 cut(s) 157, 180, 510, 843
BstF5I GGATG 3 cut(s) 837, 899, 1044
BstHHI GCGC 2 cut(s) 736, 752
BstKTI GATC 5 cut(s) 45, 163, 285, 729, 1055
BstMAI GTCTC 1 cut(s) 705
BstMBI GATC 5 cut(s) 42, 160, 282, 726, 1052
BstMWI GCNNNNNNNGC 4 cut(s) 173, 182, 185, 737
BstNI CCWGG 1 cut(s) 963
BstNSI RCATGY 2 cut(s) 37, 740
BstPAI GACNNNNGTC 1 cut(s) 964
BstSCI CCNGG 1 cut(s) 961
BstSLI GKGCMC 1 cut(s) 783
BstV1I GCAGC 4 cut(s) 163, 172, 541, 743
BstX2I RGATCY 2 cut(s) 160, 1052
BstYI RGATCY 2 cut(s) 160, 1052
Bsu36I CCTNAGG 1 cut(s) 843
BsuI GTATCC 1 cut(s) 761
BsuRI GGCC 1 cut(s) 461
BtsCI GGATG 3 cut(s) 837, 899, 1044
BtsI GCAGTG 3 cut(s) 119, 483, 781
BtsIMutI CAGTG 3 cut(s) 119, 483, 781
Cac8I GCNNGC 1 cut(s) 738
CfoI GCGC 2 cut(s) 736, 752
Cfr10I RCCGGY 1 cut(s) 490
Cfr13I GGNCC 2 cut(s) 134, 959
CseI GACGC 1 cut(s) 251
Csp6I GTAC 4 cut(s) 307, 396, 682, 946
CspCI CAANNNNNGTGG 1 cut(s) 1062
CviAII CATG 8 cut(s) 34, 299, 373, 457, 532, 737, 828, 920
CviQI GTAC 4 cut(s) 307, 396, 682, 946
DdeI CTNAG 4 cut(s) 157, 180, 510, 843
DpnI GATC 5 cut(s) 44, 162, 284, 728, 1054
DpnII GATC 5 cut(s) 42, 160, 282, 726, 1052
EaeI YGGCCR 1 cut(s) 459
Eam1104I CTCTTC 1 cut(s) 817
EarI CTCTTC 1 cut(s) 817
Eco130I CCWWGG 1 cut(s) 1048
Eco47I GGWCC 2 cut(s) 134, 959
Eco72I CACGTG 1 cut(s) 703
Eco81I CCTNAGG 1 cut(s) 843
EcoRI GAATTC 1 cut(s) 224
EcoRII CCWGG 1 cut(s) 961
EcoT14I CCWWGG 1 cut(s) 1048
ErhI CCWWGG 1 cut(s) 1048
Esp3I CGTCTC 1 cut(s) 705
FaeI CATG 8 cut(s) 37, 302, 376, 460, 535, 740, 831, 923
FaqI GGGAC 1 cut(s) 372
FatI CATG 8 cut(s) 33, 298, 372, 456, 531, 736, 827, 919
FauI CCCGC 4 cut(s) 268, 270, 922, 1084
FbaI TGATCA 1 cut(s) 282
Fnu4HI GCNGC 5 cut(s) 177, 186, 402, 555, 732
FokI GGATG 3 cut(s) 844, 906, 1031
Fsp4HI GCNGC 5 cut(s) 177, 186, 402, 555, 732
GlaI GCGC 2 cut(s) 735, 751
GluI GCNGC 5 cut(s) 177, 186, 402, 555, 732
GsuI CTGGAG 1 cut(s) 822
HaeIII GGCC 1 cut(s) 461
HapII CCGG 4 cut(s) 491, 543, 609, 891
HgaI GACGC 1 cut(s) 251
HhaI GCGC 2 cut(s) 736, 752
Hin1II CATG 8 cut(s) 37, 302, 376, 460, 535, 740, 831, 923
Hin6I GCGC 2 cut(s) 734, 750
HinP1I GCGC 2 cut(s) 734, 750
HincII GTYRAC 2 cut(s) 466, 883
HindII GTYRAC 2 cut(s) 466, 883
HinfI GANTC 4 cut(s) 208, 537, 810, 910
HpaI GTTAAC 1 cut(s) 466
HpaII CCGG 4 cut(s) 491, 543, 609, 891
HphI GGTGA 7 cut(s) 45, 52, 233, 292, 314, 376, 802
Hpy166II GTNNAC 3 cut(s) 466, 781, 883
Hpy188I TCNGA 2 cut(s) 448, 665
Hpy188III TCNNGA 2 cut(s) 543, 957
Hpy8I GTNNAC 3 cut(s) 466, 781, 883
Hpy99I CGWCG 4 cut(s) 395, 476, 641, 1010
HpyAV CCTTC 3 cut(s) 310, 352, 635
HpyCH4III ACNGT 6 cut(s) 395, 418, 581, 716, 931, 1025
HpyCH4IV ACGT 6 cut(s) 129, 148, 193, 204, 636, 702
HpyCH4V TGCA 7 cut(s) 112, 488, 570, 700, 740, 781, 786
HpyF10VI GCNNNNNNNGC 4 cut(s) 173, 182, 185, 737
HpyF3I CTNAG 4 cut(s) 157, 180, 510, 843
HpySE526I ACGT 6 cut(s) 129, 148, 193, 204, 636, 702
Hsp92II CATG 8 cut(s) 37, 302, 376, 460, 535, 740, 831, 923
HspAI GCGC 2 cut(s) 734, 750
Kpn2I TCCGGA 1 cut(s) 542
KpnI GGTACC 1 cut(s) 399
Ksp22I TGATCA 1 cut(s) 282
KspAI GTTAAC 1 cut(s) 466
Kzo9I GATC 5 cut(s) 42, 160, 282, 726, 1052
LguI GCTCTTC 1 cut(s) 817
LmnI GCTCC 2 cut(s) 193, 515
Lsp1109I GCAGC 4 cut(s) 163, 172, 541, 743
MaeII ACGT 6 cut(s) 129, 148, 193, 204, 636, 702
MaeIII GTNAC 4 cut(s) 319, 632, 790, 966
MalI GATC 5 cut(s) 44, 162, 284, 728, 1054
MboI GATC 5 cut(s) 42, 160, 282, 726, 1052
MboII GAAGA 4 cut(s) 613, 652, 767, 834
MfeI CAATTG 1 cut(s) 695
MflI RGATCY 2 cut(s) 160, 1052
MhlI GDGCHC 2 cut(s) 520, 783
MluCI AATT 3 cut(s) 224, 572, 695
MlyI GAGTC 1 cut(s) 904
MmeI TCCRAC 2 cut(s) 471, 688
MnlI CCTC 8 cut(s) 85, 175, 212, 439, 685, 797, 800, 1046
MroI TCCGGA 1 cut(s) 542
MseI TTAA 2 cut(s) 465, 477
MslI CAYNNNNRTG 5 cut(s) 14, 38, 203, 290, 866
MspI CCGG 4 cut(s) 491, 543, 609, 891
MspR9I CCNGG 1 cut(s) 963
MunI CAATTG 1 cut(s) 695
MvaI CCWGG 1 cut(s) 963
MwoI GCNNNNNNNGC 4 cut(s) 173, 182, 185, 737
NdeII GATC 5 cut(s) 42, 160, 282, 726, 1052
NlaIII CATG 8 cut(s) 37, 302, 376, 460, 535, 740, 831, 923
NlaIV GGNNCC 5 cut(s) 397, 415, 495, 673, 1054
NmeAIII GCCGAG 1 cut(s) 1017
NmuCI GTSAC 3 cut(s) 319, 790, 966
NspI RCATGY 2 cut(s) 37, 740
OliI CACNNNNGTG 1 cut(s) 14
PaeI GCATGC 1 cut(s) 740
PciSI GCTCTTC 1 cut(s) 817
PfeI GAWTC 3 cut(s) 208, 537, 810
PflMI CCANNNNNTGG 1 cut(s) 894
PkrI GCNGC 5 cut(s) 178, 187, 403, 556, 733
PleI GAGTC 1 cut(s) 904
PmaCI CACGTG 1 cut(s) 703
PmlI CACGTG 1 cut(s) 703
PpsI GAGTC 1 cut(s) 904
Ppu21I YACGTR 2 cut(s) 194, 703
PshAI GACNNNNGTC 1 cut(s) 964
Psp6I CCWGG 1 cut(s) 961
PspCI CACGTG 1 cut(s) 703
PspGI CCWGG 1 cut(s) 961
PspN4I GGNNCC 5 cut(s) 397, 415, 495, 673, 1054
PspPI GGNCC 2 cut(s) 134, 959
PsuI RGATCY 2 cut(s) 160, 1052
RsaI GTAC 4 cut(s) 308, 397, 683, 947
RsaNI GTAC 4 cut(s) 307, 396, 682, 946
RseI CAYNNNNRTG 5 cut(s) 14, 38, 203, 290, 866
SapI GCTCTTC 1 cut(s) 817
SaqAI TTAA 2 cut(s) 465, 477
SatI GCNGC 5 cut(s) 177, 186, 402, 555, 732
Sau3AI GATC 5 cut(s) 42, 160, 282, 726, 1052
Sau96I GGNCC 2 cut(s) 134, 959
SchI GAGTC 1 cut(s) 904
ScrFI CCNGG 1 cut(s) 963
SduI GDGCHC 2 cut(s) 520, 783
SinI GGWCC 2 cut(s) 134, 959
SmiMI CAYNNNNRTG 5 cut(s) 14, 38, 203, 290, 866
SphI GCATGC 1 cut(s) 740
Sse9I AATT 3 cut(s) 224, 572, 695
SsiI CCGC 6 cut(s) 261, 277, 399, 402, 915, 1077
StyD4I CCNGG 1 cut(s) 961
StyI CCWWGG 1 cut(s) 1048
TaaI ACNGT 6 cut(s) 395, 418, 581, 716, 931, 1025
TaiI ACGT 6 cut(s) 132, 151, 196, 207, 639, 705
TaqI TCGA 4 cut(s) 327, 639, 651, 1005
TasI AATT 3 cut(s) 224, 572, 695
TatI WGTACW 3 cut(s) 306, 681, 945
TauI GCSGC 1 cut(s) 404
TfiI GAWTC 3 cut(s) 208, 537, 810
Tru1I TTAA 2 cut(s) 465, 477
Tru9I TTAA 2 cut(s) 465, 477
TscAI CASTG 3 cut(s) 119, 490, 788
TseFI GTSAC 3 cut(s) 319, 790, 966
TseI GCWGC 4 cut(s) 176, 185, 554, 731
Tsp45I GTSAC 3 cut(s) 319, 790, 966
TspDTI ATGAA 3 cut(s) 334, 445, 646
TspGWI ACGGA 1 cut(s) 954
TspRI CASTG 3 cut(s) 119, 490, 788
Van91I CCANNNNNTGG 1 cut(s) 894
VneI GTGCAC 1 cut(s) 779
VpaK11BI GGWCC 2 cut(s) 134, 959
XapI RAATTY 2 cut(s) 224, 572
XceI RCATGY 2 cut(s) 37, 740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.