calcium-dependent protein kinase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 265 |
| AatII | GACGTC | 1 cut(s) | 551 |
| Acc36I | ACCTGC | 1 cut(s) | 265 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 514 |
| AccI | GTMKAC | 2 cut(s) | 551, 1254 |
| AciI | CCGC | 8 cut(s) | 30, 188, 275, 302, 372, 375, 1526, 1532 |
| AclWI | GGATC | 6 cut(s) | 43, 319, 1370, 1383, 1687, 1700 |
| AcoI | YGGCCR | 1 cut(s) | 236 |
| AcsI | RAATTY | 3 cut(s) | 394, 705, 826 |
| AcuI | CTGAAG | 6 cut(s) | 162, 753, 836, 972, 999, 1569 |
| AcyI | GRCGYC | 1 cut(s) | 548 |
| AfaI | GTAC | 4 cut(s) | 136, 957, 1730, 1758 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 184, 514, 1043, 1385, 1552, 1702 |
| AflII | CTTAAG | 2 cut(s) | 1307, 1352 |
| AgeI | ACCGGT | 1 cut(s) | 56 |
| AgsI | TTSAA | 7 cut(s) | 232, 566, 794, 1159, 1514, 1562, 1604 |
| AjiI | CACGTC | 1 cut(s) | 293 |
| AjnI | CCWGG | 1 cut(s) | 1371 |
| AleI | CACNNNNGTG | 1 cut(s) | 360 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1332, 1364, 1684, 1716 |
| Alw21I | GWGCWC | 2 cut(s) | 807, 1599 |
| Alw26I | GTCTC | 4 cut(s) | 123, 277, 917, 1768 |
| Alw44I | GTGCAC | 1 cut(s) | 803 |
| AlwI | GGATC | 6 cut(s) | 43, 319, 1370, 1383, 1687, 1700 |
| Ama87I | CYCGRG | 2 cut(s) | 312, 1771 |
| AoxI | GGCC | 3 cut(s) | 236, 1112, 1390 |
| ApaLI | GTGCAC | 1 cut(s) | 803 |
| ApeKI | GCWGC | 2 cut(s) | 1187, 1529 |
| ApoI | RAATTY | 3 cut(s) | 394, 705, 826 |
| AsiGI | ACCGGT | 1 cut(s) | 56 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 413, 570 |
| AspA2I | CCTAGG | 1 cut(s) | 1778 |
| AspLEI | GCGC | 2 cut(s) | 299, 1495 |
| AspS9I | GGNCC | 2 cut(s) | 1165, 1661 |
| AsuC2I | CCSGG | 4 cut(s) | 219, 329, 1230, 1645 |
| AsuHPI | GGTGA | 6 cut(s) | 86, 195, 246, 374, 779, 1278 |
| AsuII | TTCGAA | 2 cut(s) | 74, 417 |
| AvaI | CYCGRG | 2 cut(s) | 312, 1771 |
| AvaII | GGWCC | 2 cut(s) | 1165, 1661 |
| AvrII | CCTAGG | 1 cut(s) | 1778 |
| BaeGI | GKGCMC | 1 cut(s) | 807 |
| BamHI | GGATCC | 2 cut(s) | 1375, 1692 |
| Bbv12I | GWGCWC | 2 cut(s) | 807, 1599 |
| BbvCI | CCTCAGC | 1 cut(s) | 306 |
| BbvI | GCAGC | 2 cut(s) | 1174, 1516 |
| BccI | CCATC | 4 cut(s) | 91, 208, 1441, 1700 |
| BceAI | ACGGC | 3 cut(s) | 17, 79, 223 |
| BciT130I | CCWGG | 1 cut(s) | 1373 |
| BcnI | CCSGG | 4 cut(s) | 219, 329, 1230, 1645 |
| BcoDI | GTCTC | 4 cut(s) | 123, 277, 917, 1768 |
| BfaI | CTAG | 2 cut(s) | 1199, 1779 |
| BfoI | RGCGCY | 1 cut(s) | 300 |
| BfrI | CTTAAG | 2 cut(s) | 1307, 1352 |
| BfuAI | ACCTGC | 1 cut(s) | 265 |
| BisI | GCNGC | 5 cut(s) | 276, 373, 1188, 1527, 1530 |
| BlnI | CCTAGG | 1 cut(s) | 1778 |
| BlsI | GCNGC | 5 cut(s) | 277, 374, 1189, 1528, 1531 |
| BmcAI | AGTACT | 1 cut(s) | 957 |
| Bme1390I | CCNGG | 5 cut(s) | 219, 329, 1230, 1373, 1645 |
| Bme18I | GGWCC | 2 cut(s) | 1165, 1661 |
| BmeT110I | CYCGRG | 2 cut(s) | 312, 1771 |
| BmgBI | CACGTC | 1 cut(s) | 293 |
| BmgT120I | GGNCC | 2 cut(s) | 1165, 1661 |
| BmiI | GGNNCC | 3 cut(s) | 1377, 1662, 1694 |
| BmrFI | CCNGG | 5 cut(s) | 219, 329, 1230, 1373, 1645 |
| BmsI | GCATC | 6 cut(s) | 637, 730, 844, 1005, 1429, 1470 |
| BpmI | CTGGAG | 1 cut(s) | 1571 |
| Bpu10I | CCTNAGC | 1 cut(s) | 306 |
| Bpu14I | TTCGAA | 2 cut(s) | 74, 417 |
| BpuEI | CTTGAG | 4 cut(s) | 848, 1176, 1667, 1750 |
| BpuMI | CCSGG | 4 cut(s) | 219, 329, 1230, 1645 |
| BsaAI | YACGTR | 1 cut(s) | 1217 |
| BsaHI | GRCGYC | 1 cut(s) | 548 |
| BsaI | GGTCTC | 1 cut(s) | 1768 |
| BsaJI | CCNNGG | 6 cut(s) | 513, 1109, 1208, 1228, 1644, 1778 |
| BsaWI | WCCGGW | 2 cut(s) | 56, 121 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 985, 1015 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 184, 514, 1043, 1385, 1552, 1702 |
| Bse118I | RCCGGY | 4 cut(s) | 56, 96, 184, 205 |
| Bse1I | ACTGG | 1 cut(s) | 1554 |
| BseBI | CCWGG | 1 cut(s) | 1373 |
| BseDI | CCNNGG | 6 cut(s) | 513, 1109, 1208, 1228, 1644, 1778 |
| BseGI | GGATG | 4 cut(s) | 652, 859, 1204, 1711 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 184, 514, 1043, 1385, 1552, 1702 |
| BseMII | CTCAG | 4 cut(s) | 128, 320, 1044, 1706 |
| BseNI | ACTGG | 1 cut(s) | 1554 |
| BseSI | GKGCMC | 1 cut(s) | 807 |
| BseXI | GCAGC | 2 cut(s) | 1174, 1516 |
| BsgI | GTGCAG | 1 cut(s) | 779 |
| BshFI | GGCC | 3 cut(s) | 238, 1114, 1392 |
| BshTI | ACCGGT | 1 cut(s) | 56 |
| BsiHKAI | GWGCWC | 2 cut(s) | 807, 1599 |
| BsiHKCI | CYCGRG | 2 cut(s) | 312, 1771 |
| BsiWI | CGTACG | 1 cut(s) | 1756 |
| BslFI | GGGAC | 2 cut(s) | 234, 1674 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 184, 514, 1043, 1385, 1552, 1702 |
| BsmAI | GTCTC | 4 cut(s) | 123, 277, 917, 1768 |
| BsmBI | CGTCTC | 2 cut(s) | 277, 917 |
| BsmFI | GGGAC | 2 cut(s) | 234, 1674 |
| BsnI | GGCC | 3 cut(s) | 238, 1114, 1392 |
| Bso31I | GGTCTC | 1 cut(s) | 1768 |
| BsoBI | CYCGRG | 2 cut(s) | 312, 1771 |
| Bsp119I | TTCGAA | 2 cut(s) | 74, 417 |
| Bsp1286I | GDGCHC | 2 cut(s) | 807, 1599 |
| Bsp143I | GATC | 8 cut(s) | 48, 324, 352, 811, 904, 1298, 1375, 1692 |
| BspACI | CCGC | 8 cut(s) | 30, 188, 275, 302, 372, 375, 1526, 1532 |
| BspANI | GGCC | 3 cut(s) | 238, 1114, 1392 |
| BspCNI | CTCAG | 4 cut(s) | 127, 319, 1045, 1707 |
| BspLI | GGNNCC | 3 cut(s) | 1377, 1662, 1694 |
| BspMI | ACCTGC | 1 cut(s) | 265 |
| BspPI | GGATC | 6 cut(s) | 43, 319, 1370, 1383, 1687, 1700 |
| BspT104I | TTCGAA | 2 cut(s) | 74, 417 |
| BspTI | CTTAAG | 2 cut(s) | 1307, 1352 |
| BspTNI | GGTCTC | 1 cut(s) | 1768 |
| BsrFI | RCCGGY | 4 cut(s) | 56, 96, 184, 205 |
| BsrI | ACTGG | 1 cut(s) | 1554 |
| BssAI | RCCGGY | 4 cut(s) | 56, 96, 184, 205 |
| BssECI | CCNNGG | 6 cut(s) | 513, 1109, 1208, 1228, 1644, 1778 |
| BssMI | GATC | 8 cut(s) | 48, 324, 352, 811, 904, 1298, 1375, 1692 |
| BssNI | GRCGYC | 1 cut(s) | 548 |
| BssT1I | CCWWGG | 2 cut(s) | 1109, 1778 |
| Bst2UI | CCWGG | 1 cut(s) | 1373 |
| Bst4CI | ACNGT | 8 cut(s) | 252, 359, 368, 514, 809, 1362, 1406, 1756 |
| Bst6I | CTCTTC | 1 cut(s) | 1509 |
| BstACI | GRCGYC | 1 cut(s) | 548 |
| BstAFI | CTTAAG | 2 cut(s) | 1307, 1352 |
| BstBAI | YACGTR | 1 cut(s) | 1217 |
| BstBI | TTCGAA | 2 cut(s) | 74, 417 |
| BstC8I | GCNNGC | 1 cut(s) | 102 |
| BstDEI | CTNAG | 7 cut(s) | 114, 306, 540, 1053, 1079, 1715, 1734 |
| BstDSI | CCRYGG | 2 cut(s) | 513, 1208 |
| BstF5I | GGATG | 4 cut(s) | 652, 859, 1204, 1711 |
| BstH2I | RGCGCY | 1 cut(s) | 300 |
| BstHHI | GCGC | 2 cut(s) | 299, 1495 |
| BstKTI | GATC | 8 cut(s) | 51, 327, 355, 814, 907, 1301, 1378, 1695 |
| BstMAI | GTCTC | 4 cut(s) | 123, 277, 917, 1768 |
| BstMBI | GATC | 8 cut(s) | 48, 324, 352, 811, 904, 1298, 1375, 1692 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 194, 1193, 1310, 1439, 1501, 1586 |
| BstNI | CCWGG | 1 cut(s) | 1373 |
| BstNSI | RCATGY | 1 cut(s) | 104 |
| BstSCI | CCNGG | 5 cut(s) | 217, 327, 1228, 1371, 1643 |
| BstSLI | GKGCMC | 1 cut(s) | 807 |
| BstV1I | GCAGC | 2 cut(s) | 1174, 1516 |
| BstX2I | RGATCY | 3 cut(s) | 48, 1375, 1692 |
| BstYI | RGATCY | 3 cut(s) | 48, 1375, 1692 |
| BsuRI | GGCC | 3 cut(s) | 238, 1114, 1392 |
| BtgI | CCRYGG | 2 cut(s) | 513, 1208 |
| BtrI | CACGTC | 1 cut(s) | 293 |
| BtsCI | GGATG | 4 cut(s) | 652, 859, 1204, 1711 |
| BtsIMutI | CAGTG | 3 cut(s) | 373, 975, 1543 |
| BveI | ACCTGC | 1 cut(s) | 265 |
| Cac8I | GCNNGC | 1 cut(s) | 102 |
| CfoI | GCGC | 2 cut(s) | 299, 1495 |
| Cfr10I | RCCGGY | 4 cut(s) | 56, 96, 184, 205 |
| Cfr13I | GGNCC | 2 cut(s) | 1165, 1661 |
| CseI | GACGC | 1 cut(s) | 899 |
| Csp6I | GTAC | 4 cut(s) | 135, 956, 1729, 1757 |
| CspAI | ACCGGT | 1 cut(s) | 56 |
| CviAII | CATG | 4 cut(s) | 101, 1366, 1607, 1745 |
| CviQI | GTAC | 4 cut(s) | 135, 956, 1729, 1757 |
| DdeI | CTNAG | 7 cut(s) | 114, 306, 540, 1053, 1079, 1715, 1734 |
| DpnI | GATC | 8 cut(s) | 50, 326, 354, 813, 906, 1300, 1377, 1694 |
| DpnII | GATC | 8 cut(s) | 48, 324, 352, 811, 904, 1298, 1375, 1692 |
| DraI | TTTAAA | 1 cut(s) | 1473 |
| EaeI | YGGCCR | 1 cut(s) | 236 |
| Eam1104I | CTCTTC | 1 cut(s) | 1509 |
| EarI | CTCTTC | 1 cut(s) | 1509 |
| EciI | GGCGGA | 3 cut(s) | 19, 291, 390 |
| Eco130I | CCWWGG | 2 cut(s) | 1109, 1778 |
| Eco147I | AGGCCT | 1 cut(s) | 1392 |
| Eco31I | GGTCTC | 1 cut(s) | 1768 |
| Eco47I | GGWCC | 2 cut(s) | 1165, 1661 |
| Eco57I | CTGAAG | 6 cut(s) | 162, 753, 836, 972, 999, 1569 |
| Eco88I | CYCGRG | 2 cut(s) | 312, 1771 |
| EcoRII | CCWGG | 1 cut(s) | 1371 |
| EcoT14I | CCWWGG | 2 cut(s) | 1109, 1778 |
| ErhI | CCWWGG | 2 cut(s) | 1109, 1778 |
| Esp3I | CGTCTC | 2 cut(s) | 277, 917 |
| FaeI | CATG | 4 cut(s) | 104, 1369, 1610, 1748 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1021, 1053, 1493, 1525 |
| FaqI | GGGAC | 2 cut(s) | 234, 1674 |
| FatI | CATG | 4 cut(s) | 100, 1365, 1606, 1744 |
| FauI | CCCGC | 1 cut(s) | 181 |
| FauNDI | CATATG | 1 cut(s) | 618 |
| FblI | GTMKAC | 2 cut(s) | 551, 1254 |
| Fnu4HI | GCNGC | 5 cut(s) | 276, 373, 1188, 1527, 1530 |
| FokI | GGATG | 4 cut(s) | 659, 866, 1191, 1718 |
| Fsp4HI | GCNGC | 5 cut(s) | 276, 373, 1188, 1527, 1530 |
| FspBI | CTAG | 2 cut(s) | 1199, 1779 |
| GlaI | GCGC | 2 cut(s) | 298, 1494 |
| GluI | GCNGC | 5 cut(s) | 276, 373, 1188, 1527, 1530 |
| GsuI | CTGGAG | 1 cut(s) | 1571 |
| HaeII | RGCGCY | 1 cut(s) | 300 |
| HaeIII | GGCC | 3 cut(s) | 238, 1114, 1392 |
| HgaI | GACGC | 1 cut(s) | 899 |
| HhaI | GCGC | 2 cut(s) | 299, 1495 |
| Hin1I | GRCGYC | 1 cut(s) | 548 |
| Hin1II | CATG | 4 cut(s) | 104, 1369, 1610, 1748 |
| Hin6I | GCGC | 2 cut(s) | 297, 1493 |
| HinP1I | GCGC | 2 cut(s) | 297, 1493 |
| HincII | GTYRAC | 2 cut(s) | 148, 552 |
| HindII | GTYRAC | 2 cut(s) | 148, 552 |
| HindIII | AAGCTT | 2 cut(s) | 597, 1502 |
| HinfI | GANTC | 5 cut(s) | 76, 109, 1055, 1451, 1620 |
| HphI | GGTGA | 6 cut(s) | 86, 195, 246, 374, 779, 1278 |
| Hpy166II | GTNNAC | 6 cut(s) | 148, 552, 722, 805, 1255, 1543 |
| Hpy188I | TCNGA | 5 cut(s) | 816, 889, 1295, 1697, 1705 |
| Hpy188III | TCNNGA | 8 cut(s) | 140, 314, 1144, 1241, 1318, 1463, 1559, 1773 |
| Hpy8I | GTNNAC | 6 cut(s) | 148, 552, 722, 805, 1255, 1543 |
| Hpy99I | CGWCG | 7 cut(s) | 38, 47, 291, 294, 553, 556, 1299 |
| HpyAV | CCTTC | 5 cut(s) | 413, 677, 800, 1125, 1604 |
| HpyCH4III | ACNGT | 8 cut(s) | 252, 359, 368, 514, 809, 1362, 1406, 1756 |
| HpyCH4IV | ACGT | 5 cut(s) | 292, 548, 554, 748, 1216 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 194, 1193, 1310, 1439, 1501, 1586 |
| HpyF3I | CTNAG | 7 cut(s) | 114, 306, 540, 1053, 1079, 1715, 1734 |
| HpySE526I | ACGT | 5 cut(s) | 292, 548, 554, 748, 1216 |
| Hsp92I | GRCGYC | 1 cut(s) | 548 |
| Hsp92II | CATG | 4 cut(s) | 104, 1369, 1610, 1748 |
| HspAI | GCGC | 2 cut(s) | 297, 1493 |
| Kzo9I | GATC | 8 cut(s) | 48, 324, 352, 811, 904, 1298, 1375, 1692 |
| LmnI | GCTCC | 4 cut(s) | 202, 304, 993, 1374 |
| Lsp1109I | GCAGC | 2 cut(s) | 1174, 1516 |
| LweI | GCATC | 6 cut(s) | 637, 730, 844, 1005, 1429, 1470 |
| MaeI | CTAG | 2 cut(s) | 1199, 1779 |
| MaeII | ACGT | 5 cut(s) | 292, 548, 554, 748, 1216 |
| MaeIII | GTNAC | 9 cut(s) | 11, 59, 180, 252, 362, 1010, 1212, 1217, 1750 |
| MalI | GATC | 8 cut(s) | 50, 326, 354, 813, 906, 1300, 1377, 1694 |
| MboI | GATC | 8 cut(s) | 48, 324, 352, 811, 904, 1298, 1375, 1692 |
| MboII | GAAGA | 9 cut(s) | 353, 421, 499, 514, 578, 1059, 1349, 1526, 1574 |
| MflI | RGATCY | 3 cut(s) | 48, 1375, 1692 |
| MhlI | GDGCHC | 2 cut(s) | 807, 1599 |
| MluCI | AATT | 5 cut(s) | 394, 587, 705, 826, 1093 |
| MlyI | GAGTC | 1 cut(s) | 1064 |
| MmeI | TCCRAC | 1 cut(s) | 1318 |
| MroXI | GAANNNNTTC | 2 cut(s) | 413, 570 |
| MseI | TTAA | 6 cut(s) | 624, 1308, 1353, 1401, 1421, 1472 |
| MslI | CAYNNNNRTG | 2 cut(s) | 99, 360 |
| MspA1I | CMGCKG | 1 cut(s) | 1187 |
| MspCI | CTTAAG | 2 cut(s) | 1307, 1352 |
| MspR9I | CCNGG | 5 cut(s) | 219, 329, 1230, 1373, 1645 |
| MvaI | CCWGG | 1 cut(s) | 1373 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 194, 1193, 1310, 1439, 1501, 1586 |
| NciI | CCSGG | 4 cut(s) | 219, 329, 1230, 1645 |
| NdeI | CATATG | 1 cut(s) | 618 |
| NdeII | GATC | 8 cut(s) | 48, 324, 352, 811, 904, 1298, 1375, 1692 |
| NlaIII | CATG | 4 cut(s) | 104, 1369, 1610, 1748 |
| NlaIV | GGNNCC | 3 cut(s) | 1377, 1662, 1694 |
| NmuCI | GTSAC | 4 cut(s) | 252, 362, 1217, 1750 |
| NspI | RCATGY | 1 cut(s) | 104 |
| NspV | TTCGAA | 2 cut(s) | 74, 417 |
| OliI | CACNNNNGTG | 1 cut(s) | 360 |
| PaeI | GCATGC | 1 cut(s) | 104 |
| PaeR7I | CTCGAG | 2 cut(s) | 312, 1771 |
| PaqCI | CACCTGC | 1 cut(s) | 265 |
| PceI | AGGCCT | 1 cut(s) | 1392 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 42 |
| PdmI | GAANNNNTTC | 2 cut(s) | 413, 570 |
| PfeI | GAWTC | 4 cut(s) | 76, 109, 1451, 1620 |
| Pfl23II | CGTACG | 1 cut(s) | 1756 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 514 |
| PfoI | TCCNGGA | 3 cut(s) | 217, 327, 1371 |
| PinAI | ACCGGT | 1 cut(s) | 56 |
| PkrI | GCNGC | 5 cut(s) | 277, 374, 1189, 1528, 1531 |
| PleI | GAGTC | 1 cut(s) | 1063 |
| PpsI | GAGTC | 1 cut(s) | 1063 |
| Ppu21I | YACGTR | 1 cut(s) | 1217 |
| Psp6I | CCWGG | 1 cut(s) | 1371 |
| PspGI | CCWGG | 1 cut(s) | 1371 |
| PspLI | CGTACG | 1 cut(s) | 1756 |
| PspN4I | GGNNCC | 3 cut(s) | 1377, 1662, 1694 |
| PspPI | GGNCC | 2 cut(s) | 1165, 1661 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1721, 1753 |
| PsuI | RGATCY | 3 cut(s) | 48, 1375, 1692 |
| PvuII | CAGCTG | 1 cut(s) | 1187 |
| RsaI | GTAC | 4 cut(s) | 136, 957, 1730, 1758 |
| RsaNI | GTAC | 4 cut(s) | 135, 956, 1729, 1757 |
| RseI | CAYNNNNRTG | 2 cut(s) | 99, 360 |
| SalI | GTCGAC | 1 cut(s) | 550 |
| SaqAI | TTAA | 6 cut(s) | 624, 1308, 1353, 1401, 1421, 1472 |
| SatI | GCNGC | 5 cut(s) | 276, 373, 1188, 1527, 1530 |
| Sau3AI | GATC | 8 cut(s) | 48, 324, 352, 811, 904, 1298, 1375, 1692 |
| Sau96I | GGNCC | 2 cut(s) | 1165, 1661 |
| ScaI | AGTACT | 1 cut(s) | 957 |
| SchI | GAGTC | 1 cut(s) | 1064 |
| ScrFI | CCNGG | 5 cut(s) | 219, 329, 1230, 1373, 1645 |
| SduI | GDGCHC | 2 cut(s) | 807, 1599 |
| SfaNI | GCATC | 6 cut(s) | 637, 730, 844, 1005, 1429, 1470 |
| Sfr274I | CTCGAG | 2 cut(s) | 312, 1771 |
| SfuI | TTCGAA | 2 cut(s) | 74, 417 |
| SgrAI | CRCCGGYG | 1 cut(s) | 205 |
| SgrDI | CGTCGACG | 1 cut(s) | 550 |
| SinI | GGWCC | 2 cut(s) | 1165, 1661 |
| SlaI | CTCGAG | 2 cut(s) | 312, 1771 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 99, 360 |
| SmlI | CTYRAG | 8 cut(s) | 312, 863, 1191, 1307, 1352, 1682, 1765, 1771 |
| SmoI | CTYRAG | 8 cut(s) | 312, 863, 1191, 1307, 1352, 1682, 1765, 1771 |
| SphI | GCATGC | 1 cut(s) | 104 |
| Sse9I | AATT | 5 cut(s) | 394, 587, 705, 826, 1093 |
| SseBI | AGGCCT | 1 cut(s) | 1392 |
| SsiI | CCGC | 8 cut(s) | 30, 188, 275, 302, 372, 375, 1526, 1532 |
| SspI | AATATT | 1 cut(s) | 1065 |
| SspMI | CTAG | 2 cut(s) | 1199, 1779 |
| StuI | AGGCCT | 1 cut(s) | 1392 |
| StyD4I | CCNGG | 5 cut(s) | 217, 327, 1228, 1371, 1643 |
| StyI | CCWWGG | 2 cut(s) | 1109, 1778 |
| TaaI | ACNGT | 8 cut(s) | 252, 359, 368, 514, 809, 1362, 1406, 1756 |
| TaiI | ACGT | 5 cut(s) | 295, 551, 557, 751, 1219 |
| TaqI | TCGA | 9 cut(s) | 36, 74, 107, 313, 417, 551, 738, 1319, 1772 |
| TaqII | GACCGA | 2 cut(s) | 1240, 1678 |
| TasI | AATT | 5 cut(s) | 394, 587, 705, 826, 1093 |
| TatI | WGTACW | 1 cut(s) | 955 |
| TauI | GCSGC | 3 cut(s) | 278, 375, 1529 |
| TfiI | GAWTC | 4 cut(s) | 76, 109, 1451, 1620 |
| Tru1I | TTAA | 6 cut(s) | 624, 1308, 1353, 1401, 1421, 1472 |
| Tru9I | TTAA | 6 cut(s) | 624, 1308, 1353, 1401, 1421, 1472 |
| TscAI | CASTG | 3 cut(s) | 373, 982, 1543 |
| TseFI | GTSAC | 4 cut(s) | 252, 362, 1217, 1750 |
| TseI | GCWGC | 2 cut(s) | 1187, 1529 |
| Tsp45I | GTSAC | 4 cut(s) | 252, 362, 1217, 1750 |
| TspDTI | ATGAA | 5 cut(s) | 515, 883, 1350, 1354, 1623 |
| TspGWI | ACGGA | 5 cut(s) | 238, 1058, 1197, 1268, 1401 |
| TspRI | CASTG | 3 cut(s) | 373, 982, 1543 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 514 |
| Vha464I | CTTAAG | 2 cut(s) | 1307, 1352 |
| VneI | GTGCAC | 1 cut(s) | 803 |
| VpaK11BI | GGWCC | 2 cut(s) | 1165, 1661 |
| XapI | RAATTY | 3 cut(s) | 394, 705, 826 |
| XceI | RCATGY | 1 cut(s) | 104 |
| XhoI | CTCGAG | 2 cut(s) | 312, 1771 |
| XmaJI | CCTAGG | 1 cut(s) | 1778 |
| XmiI | GTMKAC | 2 cut(s) | 551, 1254 |
| XmnI | GAANNNNTTC | 2 cut(s) | 413, 570 |
| XspI | CTAG | 2 cut(s) | 1199, 1779 |
| ZraI | GACGTC | 1 cut(s) | 549 |
| ZrmI | AGTACT | 1 cut(s) | 957 |