Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001412

Physical Location & Seq

Genomic Coordinates Forward (+)

943681 .. 948051

Gene Structure 4371 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026171

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGGGCATTGCTGCAGCAAAAGCGCCGCCGTTTCGGTGGCCAACAACAACCACGACCACCCGACCCCCGCCGCCTCCGCCGTCGCCGTCCAGCAGTCTAAACACCCGCCGGTGCCGCCAAGCCCGGTCGCCGGCGATGTGAAGAACACTCCGTCTCACTCGTTTACGGCGAGTCCGTTCCCGAGCCCGCTCCCGGCAGGAGTGGCGCCGTCGCCGGCGAGGACTCCGGGGAGGAAGTTCAGGTGGCCGTTGCCGCCTCCGTCGCCGGCGAAGCCGATCATGGCCGCGTTTCGGCGGCGGAGGGAGGCGAAGCCGAAGGACGGGCCGATACCGGAGGAGAATAATCACCAGGGCGGCGAAGAAGAAGGAGAGAGGGGGCTGGATAAGAGCTTTGGGTATGGGAAGAACTTTGGGGCGAAATTTGAATTGGGGAAGGAGGTGGGCCGAGGGCATTTTGGTCATACTTGCTCGGCTAAGGGAAAGAAGGGAGAGCTTAAGGGTCAGCCTGTGGCTGTCAAGATCATATCCAAAGCAAAGATGACAACAGCAATAGCTATTGAAGATGTCCGTAGAGAGGTGAAAATACTGAAAGCGTTATCTGGACATAAGAATCTGGTCAAATTTTATGATGCATTTGAGGATGCCAATAATGTCTACATAGTCATGGAGTTGTGTGAAGGTGGAGAACTACTGGATAAAATTTTGTCCAGGGGTGGAAGATACACAGAAGAAGATGCTAAAGTTATTGTTGTGCAAATTTTAAGTGTTGTTGCCTACTGTCATCTTCAAGGTGTTGTGCATCGTGATCTAAAGCCAGAGAATTTTCTTTTTGCCACTAGAGAAGAGGATGCTTCAATGAGGGTTATTGATTTTGGTCTCTCCGATTTTATTAGGCCTGATCAGCGCCTCAACGATATTGTTGGTAGTGCATACTATGTTGCACCTGAAGTGCTACATAGATCCTACAGTGTTGAAGCAGATATGTGGAGCATAGGTGTAATAACATATATATTGCTATGTGGAAGTAGACCTTTCTGGGCACGAACTGAATCAGGAATCTTCCGCTCGGTGCTAAGAGCTGATCCTAACTTTAATGATACACCTTGGCCCACAGTGTCCCCAGAAGCCAAAGATTTTGTCAAGAGGCTTCTGAACAAGGATCACAGAAAAAGAATGACTGCTGCTCAAGCTTTAACTCACCCATGGCTAAGGGATGAAAGACGAGCTGTGCCTTTAGATTTAGTAATCTACAAGTTGGTTAGGTCATATGTTCGTGCCACACCTTTCAGGCGTGCAGCAATGAAGGCTCTTTCCAAGGCTATAACAGAAGATGAGCTCTACTATCTTAGGGCTCAGTTTACACTCTTGGAACCTAAACATGGATACGTGTCCCTCGATAATTTCAGAACGGCTCTCATGAAAAATTCAACTGATGCCATGAAGGAGTCGAGGGTTCATGACATCATAAATGTGATGGAGCCACTCGCGCACAAGAAATTGGACTTTGAAGAGTACTGCATTGCTGCAATAAGTACATATCAGCTAGAAGCTCTTGAAGGGTGGGAGAAGATTGCAAGTACGGCTTTTGAGTGTTTTGAAAGGGAAGGAAACCGGGTCATCTCTGTTGAGGAGTTGGCACAGGAAATGAATCTGGGTCCTACATCTTACTCTCTACTCAGAGACTGGATCAGAACCTCTGACCGAAAACTTAGCTTCCTTGGATACACCAAATTTTTGCATGGTGTGACAATACGTACTTCCAATACTAGACACCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

593

Amino Acids

66.39

Weight (kDa)

9.15

Isoelectric Point (pI)

44.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	141 - 403	1.6e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	142 - 396	3.3e-34	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	216 - 293	2.2e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49370 AT5G24430
fragaria_vesca	FvH4_7g32610 FvH4_7g32610
malus_domestica	MD01G1227200.v1.1 MD07G1297500.v1.1
prunus_persica	Prupe.2G317200_v2.0.a1 Prupe.2G317200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0382501 RchiOBHm_Chr2g0138551 RchiOBHm_Chr2g0138561 RchiOBHm_Chr2g0161821 RchiOBHm_Chr6g0303421
rosa_laevigata	RLG00000007574 RLG00000010752 RLG00000023924 RLG00000026171 RLG00000031079 RLG00000034979 RLG00000035703 RLG00000036307
rosa_multiflora	Rmu_sc0000110.1_g000053 Rmu_sc0000110.1_g000055 Rmu_sc0003696.1_g000002 Rmu_sc0029402.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111900 Rroxscaffold_4G00278000 Rroxscaffold_7G00202700
rosa_rugosa	Rorug01G0435000
rosa_samantha	Rh1AG262900 Rh1AG460000 Rh1BG182300 Rh1BG416200 Rh1CG430000 Rh1DG212400 Rh1DG448600 Rh2AG553600 Rh2BG637900 Rh4AG140900 Rh4CG147700 Rh4CG147800 Rh5CG368300 Rh5CG374200 Rh6AG435500 Rh6CG169600 Rh6CG190900 Rh6DG161600 Rh7BG358800 Rh7CG197800 Rh7CG451800
rosa_wichuraiana	Rw1G001490 Rw1G041160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	112, 205
AccBSI	CCGCTC	2 cut(s)	190, 1065
AccI	GTMKAC	2 cut(s)	654, 1027
AccII	CGCG	2 cut(s)	287, 1487
AclWI	GGATC	4 cut(s)	954, 1076, 1167, 1694
AcoI	YGGCCR	3 cut(s)	39, 245, 282
AcsI	RAATTY	7 cut(s)	419, 620, 699, 756, 820, 1423, 1730
AcuI	CTGAAG	1 cut(s)	966
AcyI	GRCGYC	1 cut(s)	206
AfaI	GTAC	4 cut(s)	1514, 1534, 1579, 1756
AfiI	CCNNNNNNNGG	6 cut(s)	131, 193, 291, 320, 574, 1379
AflII	CTTAAG	1 cut(s)	494
AflIII	ACRYGT	1 cut(s)	1386
AgsI	TTSAA	9 cut(s)	425, 560, 788, 855, 974, 1428, 1508, 1556, 1598
AjnI	CCWGG	2 cut(s)	348, 707
AjuI	GAANNNNNNNTTGG	2 cut(s)	410, 442
Alw21I	GWGCWC	1 cut(s)	1338
Alw26I	GTCTC	3 cut(s)	159, 881, 1674
AlwI	GGATC	4 cut(s)	954, 1076, 1167, 1694
AlwNI	CAGNNNCTG	1 cut(s)	1683
Ama87I	CYCGRG	1 cut(s)	181
AoxI	GGCC	7 cut(s)	39, 245, 282, 323, 442, 893, 1106
ApeKI	GCWGC	5 cut(s)	12, 15, 1181, 1295, 1523
ApoI	RAATTY	7 cut(s)	419, 620, 699, 756, 820, 1423, 1730
ArsI	GACNNNNNNTTYG	2 cut(s)	1122, 1154
AspLEI	GCGC	4 cut(s)	26, 208, 906, 1489
AspS9I	GGNCC	4 cut(s)	323, 442, 1107, 1655
AsuC2I	CCSGG	4 cut(s)	125, 194, 228, 1613
AsuHPI	GGTGA	3 cut(s)	338, 589, 1190
AvaI	CYCGRG	1 cut(s)	181
AvaII	GGWCC	1 cut(s)	1655
BaeGI	GKGCMC	1 cut(s)	1042
BalI	TGGCCA	1 cut(s)	41
BanI	GGYRCC	2 cut(s)	112, 205
BanII	GRGCYC	3 cut(s)	188, 1338, 1354
Bbv12I	GWGCWC	1 cut(s)	1338
BbvI	GCAGC	4 cut(s)	27, 1168, 1307, 1510
BccI	CCATC	1 cut(s)	1468
BceAI	ACGGC	8 cut(s)	14, 65, 71, 183, 193, 232, 1425, 1596
BciT130I	CCWGG	2 cut(s)	350, 709
BciVI	GTATCC	2 cut(s)	1376, 1715
BclI	TGATCA	1 cut(s)	898
BcnI	CCSGG	4 cut(s)	125, 194, 228, 1613
BcoDI	GTCTC	3 cut(s)	159, 881, 1674
BfaI	CTAG	3 cut(s)	837, 1544, 1767
BfmI	CTRYAG	2 cut(s)	13, 964
BfoI	RGCGCY	3 cut(s)	27, 209, 907
BfrI	CTTAAG	1 cut(s)	494
BfuI	GTATCC	2 cut(s)	1376, 1715
BmcAI	AGTACT	1 cut(s)	1514
Bme1390I	CCNGG	6 cut(s)	125, 194, 228, 350, 709, 1613
Bme18I	GGWCC	1 cut(s)	1655
BmeT110I	CYCGRG	1 cut(s)	181
BmgT120I	GGNCC	4 cut(s)	323, 442, 1107, 1655
BmiI	GGNNCC	5 cut(s)	114, 207, 1371, 1479, 1656
BmrFI	CCNGG	6 cut(s)	125, 194, 228, 350, 709, 1613
BmsI	GCATC	6 cut(s)	619, 631, 724, 808, 838, 1423
Bpu10I	CCTNAGC	2 cut(s)	474, 1208
BpuEI	CTTGAG	1 cut(s)	1170
BpuMI	CCSGG	4 cut(s)	125, 194, 228, 1613
BsaAI	YACGTR	2 cut(s)	1387, 1754
BsaHI	GRCGYC	1 cut(s)	206
BsaI	GGTCTC	1 cut(s)	881
BsaJI	CCNNGG	8 cut(s)	227, 349, 445, 708, 1103, 1202, 1314, 1717
BsaWI	WCCGGW	1 cut(s)	331
BsaXI	ACNNNNNCTCC	2 cut(s)	979, 1009
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 193, 291, 320, 574, 1379
Bse118I	RCCGGY	4 cut(s)	109, 131, 214, 265
Bse1I	ACTGG	2 cut(s)	696, 1688
Bse3DI	GCAATG	3 cut(s)	7, 1305, 1518
BseBI	CCWGG	2 cut(s)	350, 709
BseDI	CCNNGG	8 cut(s)	227, 349, 445, 708, 1103, 1202, 1314, 1717
BseGI	GGATG	3 cut(s)	646, 853, 1219
BseLI	CCNNNNNNNGG	6 cut(s)	131, 193, 291, 320, 574, 1379
BseMI	GCAATG	3 cut(s)	7, 1305, 1518
BseMII	CTCAG	2 cut(s)	1367, 1690
BseNI	ACTGG	2 cut(s)	696, 1688
BseRI	GAGGAG	2 cut(s)	350, 1643
BseSI	GKGCMC	1 cut(s)	1042
BseXI	GCAGC	4 cut(s)	27, 1168, 1307, 1510
BsgI	GTGCAG	1 cut(s)	1314
Bsh1236I	CGCG	2 cut(s)	287, 1487
Bsh1285I	CGRYCG	1 cut(s)	129
BshFI	GGCC	7 cut(s)	41, 247, 284, 325, 444, 895, 1108
BshNI	GGYRCC	2 cut(s)	112, 205
BsiEI	CGRYCG	1 cut(s)	129
BsiHKAI	GWGCWC	1 cut(s)	1338
BsiHKCI	CYCGRG	1 cut(s)	181
BsiSI	CCGG	9 cut(s)	110, 125, 132, 194, 215, 227, 266, 332, 1612
BslFI	GGGAC	2 cut(s)	1102, 1375
BslI	CCNNNNNNNGG	6 cut(s)	131, 193, 291, 320, 574, 1379
BsmAI	GTCTC	3 cut(s)	159, 881, 1674
BsmBI	CGTCTC	1 cut(s)	159
BsmFI	GGGAC	2 cut(s)	1102, 1375
BsnI	GGCC	7 cut(s)	41, 247, 284, 325, 444, 895, 1108
Bso31I	GGTCTC	1 cut(s)	881
BsoBI	CYCGRG	1 cut(s)	181
Bsp1286I	GDGCHC	4 cut(s)	188, 1042, 1338, 1354
Bsp143I	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
Bsp19I	CCATGG	1 cut(s)	1202
BspANI	GGCC	7 cut(s)	41, 247, 284, 325, 444, 895, 1108
BspCNI	CTCAG	2 cut(s)	1366, 1689
BspFNI	CGCG	2 cut(s)	287, 1487
BspHI	TCATGA	2 cut(s)	1416, 1456
BspLI	GGNNCC	5 cut(s)	114, 207, 1371, 1479, 1656
BspMAI	CTGCAG	1 cut(s)	17
BspPI	GGATC	4 cut(s)	954, 1076, 1167, 1694
BspT107I	GGYRCC	2 cut(s)	112, 205
BspTI	CTTAAG	1 cut(s)	494
BspTNI	GGTCTC	1 cut(s)	881
BsrBI	CCGCTC	2 cut(s)	190, 1065
BsrDI	GCAATG	3 cut(s)	7, 1305, 1518
BsrFI	RCCGGY	4 cut(s)	109, 131, 214, 265
BsrI	ACTGG	2 cut(s)	696, 1688
BssAI	RCCGGY	4 cut(s)	109, 131, 214, 265
BssECI	CCNNGG	8 cut(s)	227, 349, 445, 708, 1103, 1202, 1314, 1717
BssMI	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
BssNI	GRCGYC	1 cut(s)	206
BssT1I	CCWWGG	4 cut(s)	1103, 1202, 1314, 1717
Bst2UI	CCWGG	2 cut(s)	350, 709
Bst4CI	ACNGT	3 cut(s)	779, 968, 1114
Bst6I	CTCTTC	2 cut(s)	837, 1503
BstACI	GRCGYC	1 cut(s)	206
BstAFI	CTTAAG	1 cut(s)	494
BstBAI	YACGTR	2 cut(s)	1387, 1754
BstC8I	GCNNGC	5 cut(s)	133, 188, 216, 267, 1293
BstDEI	CTNAG	7 cut(s)	474, 1073, 1208, 1346, 1353, 1676, 1709
BstDSI	CCRYGG	1 cut(s)	1202
BstF5I	GGATG	3 cut(s)	646, 853, 1219
BstFNI	CGCG	2 cut(s)	287, 1487
BstH2I	RGCGCY	3 cut(s)	27, 209, 907
BstHHI	GCGC	4 cut(s)	26, 208, 906, 1489
BstKTI	GATC	8 cut(s)	279, 522, 808, 901, 962, 1084, 1162, 1689
BstMAI	GTCTC	3 cut(s)	159, 881, 1674
BstMBI	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
BstMCI	CGRYCG	1 cut(s)	129
BstNI	CCWGG	2 cut(s)	350, 709
BstSCI	CCNGG	6 cut(s)	123, 192, 226, 348, 707, 1611
BstSFI	CTRYAG	2 cut(s)	13, 964
BstSLI	GKGCMC	1 cut(s)	1042
BstSNI	TACGTA	1 cut(s)	1754
BstUI	CGCG	2 cut(s)	287, 1487
BstV1I	GCAGC	4 cut(s)	27, 1168, 1307, 1510
BstX2I	RGATCY	1 cut(s)	959
BstYI	RGATCY	1 cut(s)	959
BsuI	GTATCC	2 cut(s)	1376, 1715
BsuRI	GGCC	7 cut(s)	41, 247, 284, 325, 444, 895, 1108
BtgI	CCRYGG	1 cut(s)	1202
BtgZI	GCGATG	1 cut(s)	150
BtsCI	GGATG	3 cut(s)	646, 853, 1219
BtsIMutI	CAGTG	2 cut(s)	973, 1119
Cac8I	GCNNGC	5 cut(s)	133, 188, 216, 267, 1293
CaiI	CAGNNNCTG	1 cut(s)	1683
CciI	TCATGA	2 cut(s)	1416, 1456
CfoI	GCGC	4 cut(s)	26, 208, 906, 1489
Cfr10I	RCCGGY	4 cut(s)	109, 131, 214, 265
Cfr13I	GGNCC	4 cut(s)	323, 442, 1107, 1655
Csp6I	GTAC	4 cut(s)	1513, 1533, 1578, 1755
CviAII	CATG	8 cut(s)	280, 664, 1203, 1379, 1417, 1438, 1457, 1739
CviQI	GTAC	4 cut(s)	1513, 1533, 1578, 1755
DdeI	CTNAG	7 cut(s)	474, 1073, 1208, 1346, 1353, 1676, 1709
DinI	GGCGCC	1 cut(s)	207
DpnI	GATC	8 cut(s)	278, 521, 807, 900, 961, 1083, 1161, 1688
DpnII	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
EaeI	YGGCCR	3 cut(s)	39, 245, 282
Eam1104I	CTCTTC	2 cut(s)	837, 1503
EarI	CTCTTC	2 cut(s)	837, 1503
EciI	GGCGGA	2 cut(s)	67, 313
Ecl136II	GAGCTC	1 cut(s)	1336
Eco105I	TACGTA	1 cut(s)	1754
Eco130I	CCWWGG	4 cut(s)	1103, 1202, 1314, 1717
Eco147I	AGGCCT	1 cut(s)	895
Eco24I	GRGCYC	3 cut(s)	188, 1338, 1354
Eco31I	GGTCTC	1 cut(s)	881
Eco47I	GGWCC	1 cut(s)	1655
Eco53kI	GAGCTC	1 cut(s)	1336
Eco57I	CTGAAG	1 cut(s)	966
Eco88I	CYCGRG	1 cut(s)	181
EcoICRI	GAGCTC	1 cut(s)	1336
EcoO109I	RGGNCCY	1 cut(s)	1655
EcoRII	CCWGG	2 cut(s)	348, 707
EcoT14I	CCWWGG	4 cut(s)	1103, 1202, 1314, 1717
EcoT22I	ATGCAT	1 cut(s)	634
EcoT38I	GRGCYC	3 cut(s)	188, 1338, 1354
EgeI	GGCGCC	1 cut(s)	207
EheI	GGCGCC	1 cut(s)	207
ErhI	CCWWGG	4 cut(s)	1103, 1202, 1314, 1717
Esp3I	CGTCTC	1 cut(s)	159
FaeI	CATG	8 cut(s)	283, 667, 1206, 1382, 1420, 1441, 1460, 1742
FalI	AAGNNNNNCTT	4 cut(s)	1015, 1047, 1567, 1599
FaqI	GGGAC	2 cut(s)	1102, 1375
FatI	CATG	8 cut(s)	279, 663, 1202, 1378, 1416, 1437, 1456, 1738
FauI	CCCGC	3 cut(s)	76, 114, 195
FauNDI	CATATG	1 cut(s)	1267
FbaI	TGATCA	1 cut(s)	898
FblI	GTMKAC	2 cut(s)	654, 1027
FokI	GGATG	3 cut(s)	653, 860, 1226
FriOI	GRGCYC	3 cut(s)	188, 1338, 1354
FspBI	CTAG	3 cut(s)	837, 1544, 1767
GlaI	GCGC	4 cut(s)	25, 207, 905, 1488
HaeII	RGCGCY	3 cut(s)	27, 209, 907
HaeIII	GGCC	7 cut(s)	41, 247, 284, 325, 444, 895, 1108
HapII	CCGG	9 cut(s)	110, 125, 132, 194, 215, 227, 266, 332, 1612
HhaI	GCGC	4 cut(s)	26, 208, 906, 1489
Hin1I	GRCGYC	1 cut(s)	206
Hin1II	CATG	8 cut(s)	283, 667, 1206, 1382, 1420, 1441, 1460, 1742
Hin6I	GCGC	4 cut(s)	24, 206, 904, 1487
HinP1I	GCGC	4 cut(s)	24, 206, 904, 1487
HindIII	AAGCTT	1 cut(s)	1188
HinfI	GANTC	7 cut(s)	172, 223, 610, 1049, 1056, 1445, 1648
HpaII	CCGG	9 cut(s)	110, 125, 132, 194, 215, 227, 266, 332, 1612
HphI	GGTGA	3 cut(s)	338, 589, 1190
Hpy166II	GTNNAC	4 cut(s)	165, 655, 1028, 1359
Hpy188I	TCNGA	6 cut(s)	883, 1152, 1406, 1679, 1691, 1699
Hpy188III	TCNNGA	9 cut(s)	181, 517, 600, 803, 1053, 1141, 1417, 1457, 1553
Hpy8I	GTNNAC	4 cut(s)	165, 655, 1028, 1359
Hpy99I	CGWCG	3 cut(s)	86, 214, 265
HpyAV	CCTTC	9 cut(s)	310, 359, 427, 478, 671, 1297, 1435, 1550, 1598
HpyCH4III	ACNGT	3 cut(s)	779, 968, 1114
HpyCH4IV	ACGT	2 cut(s)	1386, 1753
HpyF3I	CTNAG	7 cut(s)	474, 1073, 1208, 1346, 1353, 1676, 1709
HpySE526I	ACGT	2 cut(s)	1386, 1753
Hsp92I	GRCGYC	1 cut(s)	206
Hsp92II	CATG	8 cut(s)	283, 667, 1206, 1382, 1420, 1441, 1460, 1742
HspAI	GCGC	4 cut(s)	24, 206, 904, 1487
KasI	GGCGCC	1 cut(s)	205
KroI	GCCGGC	3 cut(s)	131, 214, 265
KroNI	GCCGGC	3 cut(s)	133, 216, 267
Ksp22I	TGATCA	1 cut(s)	898
Kzo9I	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
LmnI	GCTCC	3 cut(s)	195, 987, 1477
Lsp1109I	GCAGC	4 cut(s)	27, 1168, 1307, 1510
LweI	GCATC	6 cut(s)	619, 631, 724, 808, 838, 1423
MaeI	CTAG	3 cut(s)	837, 1544, 1767
MaeII	ACGT	2 cut(s)	1386, 1753
MaeIII	GTNAC	1 cut(s)	1744
MalI	GATC	8 cut(s)	278, 521, 807, 900, 961, 1083, 1161, 1688
MbiI	CCGCTC	2 cut(s)	190, 1065
MboI	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
MflI	RGATCY	1 cut(s)	959
MhlI	GDGCHC	4 cut(s)	188, 1042, 1338, 1354
MlsI	TGGCCA	1 cut(s)	41
MluNI	TGGCCA	1 cut(s)	41
Mly113I	GGCGCC	1 cut(s)	206
MlyI	GAGTC	3 cut(s)	181, 217, 1454
Mox20I	TGGCCA	1 cut(s)	41
Mph1103I	ATGCAT	1 cut(s)	634
MreI	CGCCGGCG	3 cut(s)	131, 214, 265
MroNI	GCCGGC	3 cut(s)	131, 214, 265
MscI	TGGCCA	1 cut(s)	41
MseI	TTAA	4 cut(s)	495, 761, 1092, 1193
MslI	CAYNNNNRTG	2 cut(s)	662, 1469
Msp20I	TGGCCA	1 cut(s)	41
MspCI	CTTAAG	1 cut(s)	494
MspI	CCGG	9 cut(s)	110, 125, 132, 194, 215, 227, 266, 332, 1612
MspR9I	CCNGG	6 cut(s)	125, 194, 228, 350, 709, 1613
MvaI	CCWGG	2 cut(s)	350, 709
MvnI	CGCG	2 cut(s)	287, 1487
NaeI	GCCGGC	3 cut(s)	133, 216, 267
NarI	GGCGCC	1 cut(s)	206
NciI	CCSGG	4 cut(s)	125, 194, 228, 1613
NcoI	CCATGG	1 cut(s)	1202
NdeI	CATATG	1 cut(s)	1267
NdeII	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
NgoMIV	GCCGGC	3 cut(s)	131, 214, 265
NlaIII	CATG	8 cut(s)	283, 667, 1206, 1382, 1420, 1441, 1460, 1742
NlaIV	GGNNCC	5 cut(s)	114, 207, 1371, 1479, 1656
NmeAIII	GCCGAG	2 cut(s)	449, 470
NmuCI	GTSAC	1 cut(s)	1744
NsiI	ATGCAT	1 cut(s)	634
PagI	TCATGA	2 cut(s)	1416, 1456
PceI	AGGCCT	1 cut(s)	895
PcsI	WCGNNNNNNNCGW	3 cut(s)	167, 173, 1392
PdiI	GCCGGC	3 cut(s)	133, 216, 267
PfeI	GAWTC	4 cut(s)	610, 1049, 1056, 1648
PleI	GAGTC	3 cut(s)	180, 217, 1453
PluTI	GGCGCC	1 cut(s)	209
PpsI	GAGTC	3 cut(s)	180, 217, 1453
Ppu21I	YACGTR	2 cut(s)	1387, 1754
PpuMI	RGGWCCY	1 cut(s)	1655
Psp124BI	GAGCTC	1 cut(s)	1338
Psp5II	RGGWCCY	1 cut(s)	1655
Psp6I	CCWGG	2 cut(s)	348, 707
PspGI	CCWGG	2 cut(s)	348, 707
PspN4I	GGNNCC	5 cut(s)	114, 207, 1371, 1479, 1656
PspPI	GGNCC	4 cut(s)	323, 442, 1107, 1655
PspPPI	RGGWCCY	1 cut(s)	1655
PstI	CTGCAG	1 cut(s)	17
PstNI	CAGNNNCTG	1 cut(s)	1683
PsuI	RGATCY	1 cut(s)	959
RsaI	GTAC	4 cut(s)	1514, 1534, 1579, 1756
RsaNI	GTAC	4 cut(s)	1513, 1533, 1578, 1755
RseI	CAYNNNNRTG	2 cut(s)	662, 1469
SacI	GAGCTC	1 cut(s)	1338
SaqAI	TTAA	4 cut(s)	495, 761, 1092, 1193
Sau3AI	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
Sau96I	GGNCC	4 cut(s)	323, 442, 1107, 1655
ScaI	AGTACT	1 cut(s)	1514
SchI	GAGTC	3 cut(s)	181, 217, 1454
ScrFI	CCNGG	6 cut(s)	125, 194, 228, 350, 709, 1613
SduI	GDGCHC	4 cut(s)	188, 1042, 1338, 1354
SfaNI	GCATC	6 cut(s)	619, 631, 724, 808, 838, 1423
SfcI	CTRYAG	2 cut(s)	13, 964
SfoI	GGCGCC	1 cut(s)	207
SgrAI	CRCCGGYG	4 cut(s)	109, 131, 214, 265
SinI	GGWCC	1 cut(s)	1655
SmiMI	CAYNNNNRTG	2 cut(s)	662, 1469
SmlI	CTYRAG	2 cut(s)	494, 1185
SmoI	CTYRAG	2 cut(s)	494, 1185
SnaBI	TACGTA	1 cut(s)	1754
SseBI	AGGCCT	1 cut(s)	895
SspDI	GGCGCC	1 cut(s)	205
SspMI	CTAG	3 cut(s)	837, 1544, 1767
SstI	GAGCTC	1 cut(s)	1338
StuI	AGGCCT	1 cut(s)	895
StyD4I	CCNGG	6 cut(s)	123, 192, 226, 348, 707, 1611
StyI	CCWWGG	4 cut(s)	1103, 1202, 1314, 1717
TaaI	ACNGT	3 cut(s)	779, 968, 1114
TaiI	ACGT	2 cut(s)	1389, 1756
TaqI	TCGA	2 cut(s)	1395, 1448
TaqII	GACCGA	1 cut(s)	1716
TatI	WGTACW	2 cut(s)	1512, 1532
TauI	GCSGC	7 cut(s)	29, 74, 118, 256, 287, 298, 357
TfiI	GAWTC	4 cut(s)	610, 1049, 1056, 1648
Tru1I	TTAA	4 cut(s)	495, 761, 1092, 1193
Tru9I	TTAA	4 cut(s)	495, 761, 1092, 1193
TscAI	CASTG	2 cut(s)	973, 1119
TseFI	GTSAC	1 cut(s)	1744
TseI	GCWGC	5 cut(s)	12, 15, 1181, 1295, 1523
Tsp45I	GTSAC	1 cut(s)	1744
TspDTI	ATGAA	6 cut(s)	1230, 1316, 1433, 1445, 1454, 1661
TspGWI	ACGGA	4 cut(s)	141, 165, 249, 557
TspRI	CASTG	2 cut(s)	973, 1119
Vha464I	CTTAAG	1 cut(s)	494
VpaK11BI	GGWCC	1 cut(s)	1655
XapI	RAATTY	7 cut(s)	419, 620, 699, 756, 820, 1423, 1730
XmiI	GTMKAC	2 cut(s)	654, 1027
XspI	CTAG	3 cut(s)	837, 1544, 1767
ZrmI	AGTACT	1 cut(s)	1514
Zsp2I	ATGCAT	1 cut(s)	634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.