Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001412

Physical Location & Seq

Genomic Coordinates Reverse (-)

67343223 .. 67348081

Gene Structure 4859 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ60547

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGGGCATTGCTGCAGCAAAAGCGCCGCCGTTTCGGTGGCCAACAACAACCACGACCACCCGACCCCCGCCTCCGCCGTCGCCGTCCAGCAGTCTAAACAGCCGCCGGTGCTGACGAGCCCGGTCGCCGGCGATGTGAAGAACACTCCGTCTCACTCATTTACGGCGAGTCCGTTCCCGAGCCCGCTCCCGGCCGGAGTGGCGCCGTCGCCGGCGAGGACGCCAGGGAGGAAGTTCAGGTGGCCGCTGCCGCCTCCGTCGCCGGCGAAGCCGATCATGGCCGCGTTTCGGCGGCGGAGGGAGGCGAAGCCGAAGGACGGGCCGATACCGGAGGAGAATAATCACCAGGGCGGCGAAGAAGAAGGAGAGAGGGGGCTGGACAAGAGCTTTGGGTATGGGAAGAACTTTGGGGCGAAATTTGAATTGGGGAAGGAGGTGGGCCGAGGGCATTTTGGTCATACTTGCTCGGCTAAGGGAAAGAAGGGAGAGCTTAAGGGTCAGCCTGTGGCTGTCAAGATCATATCCAAAGCAAAGATGACAACAGCAATAGCTATTGAAGATGTCCGTAGAGAGGTGAAAATACTGAAAGCATTATCTGGACATAAGAATCTGGTCAAATTTTATGATGCATTTGAGGATGCCAATAATGTCTACATAGTCATGGAGTTGTGTGAAGGTGGAGAACTACTGGATAAAATTTTGTCCAGGGGTGGAAGATACACAGAAGAAGATGCTAAAGTTATTGTTGTGCAAATTTTAAGTGTTGTTGCCTACTGTCATCTTCAAGGTGTTGTGCATCGTGATCTAAAGCCAGAGAATTTTCTTTTTGCCACTAGAGAAGAGGATGCTTCAATGAGGGTTATTGATTTTGGTCTCTCCGATTTTATTAGGCCTGATCAGCGCCTCAACGATATTGTTGGTAGTGCATACTATGTTGCACCTGAAGTGCTACATAGATCCTACAGTGTTGAAGCAGATATGTGGAGCATAGGTGTAATAACATATATATTGCTATGTGGAAGTAGACCTTTCTGGGCACGAACTGAATCAGGAATCTTCCGCTCGGTGCTAAGAGCTGATCCTAACTTTAATGATACACCTTGGCCCACAGTGTCCCCAGAAGCCAAAGATTTTGTCAAGAGGCTTCTGAACAAGGATCACAGAAAAAGAATGACTGCTGCTCAAGCTTTAACCCACCCATGGCTAAGGGATGAAAGACGAGCTGTGTCTTTAGATTTAGTAATCTACAAGTTGGTTAGGTCATATGTTCGTGCCACACCTTTCAGGCGTGCAGCAATGAAGGCTCTTTCCAAGGCTATAACAGAAGATGAGCTCTACTATCTTAGGGCTCAGTTTACACTCTTGGAACCCAAACATGGATACGTGTCCCTCGATAATTTCAGAACGGCTCTCATGAAAAATTCAACTGATGCCATGAAGGAGTCGAGGGTTCATGACATCTTAAATGTGATGGAGCCACTCGCGCACAAGAAATTGGACTTTGAAGAGTTCTGCGTTGCCGCAATAAGTACATATCAGCTAGAAGCTCTTGAAGGGTGGGAGAAGATTGCAAGTACAGCTTTTGAGTGTTTTGAAAGGGAAGGAAACCGGGTCATCTCTGTTGAGGAGTTGGCACAGGAAATGAATCTGGGTCCTACATCTTACTCTCTACTCAGAGACTGGATCAGAACCTCCGACCGAAAACTTAGCTTCCTTGGATACACCAAATTTTTGCATGGTGTGACAATACGGACTTCCAATACCAGACACCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

591

Amino Acids

66.29

Weight (kDa)

9.16

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	140 - 402	1.6e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	141 - 395	3.3e-34	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	215 - 292	2.2e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49370 AT5G24430
fragaria_vesca	FvH4_7g32610 FvH4_7g32610
malus_domestica	MD01G1227200.v1.1 MD07G1297500.v1.1
prunus_persica	Prupe.2G317200_v2.0.a1 Prupe.2G317200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0382501 RchiOBHm_Chr2g0138551 RchiOBHm_Chr2g0138561 RchiOBHm_Chr2g0161821 RchiOBHm_Chr6g0303421
rosa_laevigata	RLG00000007574 RLG00000010752 RLG00000023924 RLG00000026171 RLG00000031079 RLG00000034979 RLG00000035703 RLG00000036307
rosa_multiflora	Rmu_sc0000110.1_g000053 Rmu_sc0000110.1_g000055 Rmu_sc0003696.1_g000002 Rmu_sc0029402.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111900 Rroxscaffold_4G00278000 Rroxscaffold_7G00202700
rosa_rugosa	Rorug01G0435000
rosa_samantha	Rh1AG262900 Rh1AG460000 Rh1BG182300 Rh1BG416200 Rh1CG430000 Rh1DG212400 Rh1DG448600 Rh2AG553600 Rh2BG637900 Rh4AG140900 Rh4CG147700 Rh4CG147800 Rh5CG368300 Rh5CG374200 Rh6AG435500 Rh6CG169600 Rh6CG190900 Rh6DG161600 Rh7BG358800 Rh7CG197800 Rh7CG451800
rosa_wichuraiana	Rw1G001490 Rw1G041160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	202
AccBSI	CCGCTC	2 cut(s)	187, 1062
AccI	GTMKAC	2 cut(s)	651, 1024
AccII	CGCG	2 cut(s)	284, 1484
AclWI	GGATC	4 cut(s)	951, 1073, 1164, 1691
AcoI	YGGCCR	4 cut(s)	39, 192, 242, 279
AcsI	RAATTY	7 cut(s)	416, 617, 696, 753, 817, 1420, 1727
AcuI	CTGAAG	1 cut(s)	963
AcyI	GRCGYC	2 cut(s)	203, 221
AfaI	GTAC	2 cut(s)	1531, 1576
AfiI	CCNNNNNNNGG	7 cut(s)	128, 190, 288, 317, 571, 1200, 1376
AflII	CTTAAG	1 cut(s)	491
AflIII	ACRYGT	1 cut(s)	1383
AgsI	TTSAA	9 cut(s)	422, 557, 785, 852, 971, 1425, 1505, 1553, 1595
AjnI	CCWGG	3 cut(s)	223, 345, 704
AjuI	GAANNNNNNNTTGG	2 cut(s)	407, 439
Alw21I	GWGCWC	1 cut(s)	1335
Alw26I	GTCTC	3 cut(s)	156, 878, 1671
AlwI	GGATC	4 cut(s)	951, 1073, 1164, 1691
AlwNI	CAGNNNCTG	1 cut(s)	1680
Ama87I	CYCGRG	1 cut(s)	178
AoxI	GGCC	8 cut(s)	39, 192, 242, 279, 320, 439, 890, 1103
ApeKI	GCWGC	5 cut(s)	12, 15, 247, 1178, 1292
ApoI	RAATTY	7 cut(s)	416, 617, 696, 753, 817, 1420, 1727
ArsI	GACNNNNNNTTYG	4 cut(s)	371, 403, 1119, 1151
AspLEI	GCGC	4 cut(s)	26, 205, 903, 1486
AspS9I	GGNCC	4 cut(s)	320, 439, 1104, 1652
AsuC2I	CCSGG	3 cut(s)	122, 191, 1610
AsuHPI	GGTGA	2 cut(s)	335, 586
AvaI	CYCGRG	1 cut(s)	178
AvaII	GGWCC	1 cut(s)	1652
BaeGI	GKGCMC	1 cut(s)	1039
BalI	TGGCCA	1 cut(s)	41
BanI	GGYRCC	1 cut(s)	202
BanII	GRGCYC	4 cut(s)	122, 185, 1335, 1351
Bbv12I	GWGCWC	1 cut(s)	1335
BbvI	GCAGC	4 cut(s)	27, 234, 1165, 1304
BccI	CCATC	1 cut(s)	1465
BceAI	ACGGC	6 cut(s)	14, 62, 68, 180, 190, 1422
BciT130I	CCWGG	3 cut(s)	225, 347, 706
BciVI	GTATCC	2 cut(s)	1373, 1712
BclI	TGATCA	1 cut(s)	895
BcnI	CCSGG	3 cut(s)	122, 191, 1610
BcoDI	GTCTC	3 cut(s)	156, 878, 1671
BfaI	CTAG	2 cut(s)	834, 1541
BfmI	CTRYAG	2 cut(s)	13, 961
BfoI	RGCGCY	3 cut(s)	27, 206, 904
BfrI	CTTAAG	1 cut(s)	491
BfuI	GTATCC	2 cut(s)	1373, 1712
BglI	GCCNNNNNGGC	1 cut(s)	200
Bme1390I	CCNGG	6 cut(s)	122, 191, 225, 347, 706, 1610
Bme18I	GGWCC	1 cut(s)	1652
BmeT110I	CYCGRG	1 cut(s)	178
BmgT120I	GGNCC	4 cut(s)	320, 439, 1104, 1652
BmiI	GGNNCC	4 cut(s)	204, 1368, 1476, 1653
BmrFI	CCNGG	6 cut(s)	122, 191, 225, 347, 706, 1610
BmsI	GCATC	6 cut(s)	616, 628, 721, 805, 835, 1420
Bpu10I	CCTNAGC	2 cut(s)	471, 1205
BpuEI	CTTGAG	1 cut(s)	1167
BpuMI	CCSGG	3 cut(s)	122, 191, 1610
BsaAI	YACGTR	1 cut(s)	1384
BsaHI	GRCGYC	2 cut(s)	203, 221
BsaI	GGTCTC	1 cut(s)	878
BsaJI	CCNNGG	8 cut(s)	224, 346, 442, 705, 1100, 1199, 1311, 1714
BsaWI	WCCGGW	1 cut(s)	328
BsaXI	ACNNNNNCTCC	2 cut(s)	976, 1006
Bsc4I	CCNNNNNNNGG	7 cut(s)	128, 190, 288, 317, 571, 1200, 1376
Bse118I	RCCGGY	4 cut(s)	106, 128, 211, 262
Bse1I	ACTGG	2 cut(s)	693, 1685
Bse3DI	GCAATG	2 cut(s)	7, 1302
BseBI	CCWGG	3 cut(s)	225, 347, 706
BseDI	CCNNGG	8 cut(s)	224, 346, 442, 705, 1100, 1199, 1311, 1714
BseGI	GGATG	3 cut(s)	643, 850, 1216
BseLI	CCNNNNNNNGG	7 cut(s)	128, 190, 288, 317, 571, 1200, 1376
BseMI	GCAATG	2 cut(s)	7, 1302
BseMII	CTCAG	2 cut(s)	1364, 1687
BseNI	ACTGG	2 cut(s)	693, 1685
BseRI	GAGGAG	2 cut(s)	347, 1640
BseSI	GKGCMC	1 cut(s)	1039
BseX3I	CGGCCG	1 cut(s)	192
BseXI	GCAGC	4 cut(s)	27, 234, 1165, 1304
BsgI	GTGCAG	1 cut(s)	1311
Bsh1236I	CGCG	2 cut(s)	284, 1484
Bsh1285I	CGRYCG	3 cut(s)	126, 195, 1699
BshFI	GGCC	8 cut(s)	41, 194, 244, 281, 322, 441, 892, 1105
BshNI	GGYRCC	1 cut(s)	202
BsiEI	CGRYCG	3 cut(s)	126, 195, 1699
BsiHKAI	GWGCWC	1 cut(s)	1335
BsiHKCI	CYCGRG	1 cut(s)	178
BsiSI	CCGG	9 cut(s)	107, 122, 129, 191, 195, 212, 263, 329, 1609
BslFI	GGGAC	2 cut(s)	1099, 1372
BslI	CCNNNNNNNGG	7 cut(s)	128, 190, 288, 317, 571, 1200, 1376
BsmAI	GTCTC	3 cut(s)	156, 878, 1671
BsmBI	CGTCTC	1 cut(s)	156
BsmFI	GGGAC	2 cut(s)	1099, 1372
BsnI	GGCC	8 cut(s)	41, 194, 244, 281, 322, 441, 892, 1105
Bso31I	GGTCTC	1 cut(s)	878
BsoBI	CYCGRG	1 cut(s)	178
Bsp1286I	GDGCHC	5 cut(s)	122, 185, 1039, 1335, 1351
Bsp143I	GATC	8 cut(s)	273, 516, 802, 895, 956, 1078, 1156, 1683
Bsp19I	CCATGG	1 cut(s)	1199
BspANI	GGCC	8 cut(s)	41, 194, 244, 281, 322, 441, 892, 1105
BspCNI	CTCAG	2 cut(s)	1363, 1686
BspFNI	CGCG	2 cut(s)	284, 1484
BspHI	TCATGA	2 cut(s)	1413, 1453
BspLI	GGNNCC	4 cut(s)	204, 1368, 1476, 1653
BspMAI	CTGCAG	1 cut(s)	17
BspPI	GGATC	4 cut(s)	951, 1073, 1164, 1691
BspT107I	GGYRCC	1 cut(s)	202
BspTI	CTTAAG	1 cut(s)	491
BspTNI	GGTCTC	1 cut(s)	878
BsrBI	CCGCTC	2 cut(s)	187, 1062
BsrDI	GCAATG	2 cut(s)	7, 1302
BsrFI	RCCGGY	4 cut(s)	106, 128, 211, 262
BsrI	ACTGG	2 cut(s)	693, 1685
BssAI	RCCGGY	4 cut(s)	106, 128, 211, 262
BssECI	CCNNGG	8 cut(s)	224, 346, 442, 705, 1100, 1199, 1311, 1714
BssMI	GATC	8 cut(s)	273, 516, 802, 895, 956, 1078, 1156, 1683
BssNI	GRCGYC	2 cut(s)	203, 221
BssT1I	CCWWGG	4 cut(s)	1100, 1199, 1311, 1714
Bst2UI	CCWGG	3 cut(s)	225, 347, 706
Bst4CI	ACNGT	3 cut(s)	776, 965, 1111
Bst6I	CTCTTC	2 cut(s)	834, 1500
BstACI	GRCGYC	2 cut(s)	203, 221
BstAFI	CTTAAG	1 cut(s)	491
BstBAI	YACGTR	1 cut(s)	1384
BstC8I	GCNNGC	5 cut(s)	130, 185, 213, 264, 1290
BstDEI	CTNAG	7 cut(s)	471, 1070, 1205, 1343, 1350, 1673, 1706
BstDSI	CCRYGG	1 cut(s)	1199
BstF5I	GGATG	3 cut(s)	643, 850, 1216
BstFNI	CGCG	2 cut(s)	284, 1484
BstH2I	RGCGCY	3 cut(s)	27, 206, 904
BstHHI	GCGC	4 cut(s)	26, 205, 903, 1486
BstKTI	GATC	8 cut(s)	276, 519, 805, 898, 959, 1081, 1159, 1686
BstMAI	GTCTC	3 cut(s)	156, 878, 1671
BstMBI	GATC	8 cut(s)	273, 516, 802, 895, 956, 1078, 1156, 1683
BstMCI	CGRYCG	3 cut(s)	126, 195, 1699
BstNI	CCWGG	3 cut(s)	225, 347, 706
BstSCI	CCNGG	6 cut(s)	120, 189, 223, 345, 704, 1608
BstSFI	CTRYAG	2 cut(s)	13, 961
BstSLI	GKGCMC	1 cut(s)	1039
BstUI	CGCG	2 cut(s)	284, 1484
BstV1I	GCAGC	4 cut(s)	27, 234, 1165, 1304
BstX2I	RGATCY	1 cut(s)	956
BstYI	RGATCY	1 cut(s)	956
BstZI	CGGCCG	1 cut(s)	192
BsuI	GTATCC	2 cut(s)	1373, 1712
BsuRI	GGCC	8 cut(s)	41, 194, 244, 281, 322, 441, 892, 1105
BtgI	CCRYGG	1 cut(s)	1199
BtgZI	GCGATG	1 cut(s)	147
BtsCI	GGATG	3 cut(s)	643, 850, 1216
BtsIMutI	CAGTG	2 cut(s)	970, 1116
Cac8I	GCNNGC	5 cut(s)	130, 185, 213, 264, 1290
CaiI	CAGNNNCTG	1 cut(s)	1680
CciI	TCATGA	2 cut(s)	1413, 1453
CfoI	GCGC	4 cut(s)	26, 205, 903, 1486
Cfr10I	RCCGGY	4 cut(s)	106, 128, 211, 262
Cfr13I	GGNCC	4 cut(s)	320, 439, 1104, 1652
CseI	GACGC	1 cut(s)	229
Csp6I	GTAC	2 cut(s)	1530, 1575
CviAII	CATG	8 cut(s)	277, 661, 1200, 1376, 1414, 1435, 1454, 1736
CviQI	GTAC	2 cut(s)	1530, 1575
DdeI	CTNAG	7 cut(s)	471, 1070, 1205, 1343, 1350, 1673, 1706
DinI	GGCGCC	1 cut(s)	204
DpnI	GATC	8 cut(s)	275, 518, 804, 897, 958, 1080, 1158, 1685
DpnII	GATC	8 cut(s)	273, 516, 802, 895, 956, 1078, 1156, 1683
EaeI	YGGCCR	4 cut(s)	39, 192, 242, 279
EagI	CGGCCG	1 cut(s)	192
Eam1104I	CTCTTC	2 cut(s)	834, 1500
EarI	CTCTTC	2 cut(s)	834, 1500
EciI	GGCGGA	2 cut(s)	64, 310
Ecl136II	GAGCTC	1 cut(s)	1333
EclXI	CGGCCG	1 cut(s)	192
Eco130I	CCWWGG	4 cut(s)	1100, 1199, 1311, 1714
Eco147I	AGGCCT	1 cut(s)	892
Eco24I	GRGCYC	4 cut(s)	122, 185, 1335, 1351
Eco31I	GGTCTC	1 cut(s)	878
Eco47I	GGWCC	1 cut(s)	1652
Eco52I	CGGCCG	1 cut(s)	192
Eco53kI	GAGCTC	1 cut(s)	1333
Eco57I	CTGAAG	1 cut(s)	963
Eco88I	CYCGRG	1 cut(s)	178
EcoICRI	GAGCTC	1 cut(s)	1333
EcoO109I	RGGNCCY	1 cut(s)	1652
EcoRII	CCWGG	3 cut(s)	223, 345, 704
EcoT14I	CCWWGG	4 cut(s)	1100, 1199, 1311, 1714
EcoT22I	ATGCAT	1 cut(s)	631
EcoT38I	GRGCYC	4 cut(s)	122, 185, 1335, 1351
EgeI	GGCGCC	1 cut(s)	204
EheI	GGCGCC	1 cut(s)	204
ErhI	CCWWGG	4 cut(s)	1100, 1199, 1311, 1714
Esp3I	CGTCTC	1 cut(s)	156
FaeI	CATG	8 cut(s)	280, 664, 1203, 1379, 1417, 1438, 1457, 1739
FalI	AAGNNNNNCTT	4 cut(s)	1012, 1044, 1564, 1596
FaqI	GGGAC	2 cut(s)	1099, 1372
FatI	CATG	8 cut(s)	276, 660, 1199, 1375, 1413, 1434, 1453, 1735
FauI	CCCGC	2 cut(s)	76, 192
FauNDI	CATATG	1 cut(s)	1264
FbaI	TGATCA	1 cut(s)	895
FblI	GTMKAC	2 cut(s)	651, 1024
FokI	GGATG	3 cut(s)	650, 857, 1223
FriOI	GRGCYC	4 cut(s)	122, 185, 1335, 1351
FspBI	CTAG	2 cut(s)	834, 1541
GlaI	GCGC	4 cut(s)	25, 204, 902, 1485
HaeII	RGCGCY	3 cut(s)	27, 206, 904
HaeIII	GGCC	8 cut(s)	41, 194, 244, 281, 322, 441, 892, 1105
HapII	CCGG	9 cut(s)	107, 122, 129, 191, 195, 212, 263, 329, 1609
HgaI	GACGC	1 cut(s)	229
HhaI	GCGC	4 cut(s)	26, 205, 903, 1486
Hin1I	GRCGYC	2 cut(s)	203, 221
Hin1II	CATG	8 cut(s)	280, 664, 1203, 1379, 1417, 1438, 1457, 1739
Hin6I	GCGC	4 cut(s)	24, 203, 901, 1484
HinP1I	GCGC	4 cut(s)	24, 203, 901, 1484
HindIII	AAGCTT	1 cut(s)	1185
HinfI	GANTC	6 cut(s)	169, 607, 1046, 1053, 1442, 1645
HpaII	CCGG	9 cut(s)	107, 122, 129, 191, 195, 212, 263, 329, 1609
HphI	GGTGA	2 cut(s)	335, 586
Hpy166II	GTNNAC	3 cut(s)	652, 1025, 1356
Hpy188I	TCNGA	6 cut(s)	880, 1149, 1403, 1676, 1688, 1696
Hpy188III	TCNNGA	9 cut(s)	178, 514, 597, 800, 1050, 1138, 1414, 1454, 1550
Hpy8I	GTNNAC	3 cut(s)	652, 1025, 1356
Hpy99I	CGWCG	3 cut(s)	83, 211, 262
HpyAV	CCTTC	9 cut(s)	307, 356, 424, 475, 668, 1294, 1432, 1547, 1595
HpyCH4III	ACNGT	3 cut(s)	776, 965, 1111
HpyCH4IV	ACGT	1 cut(s)	1383
HpyCH4V	TGCA	9 cut(s)	15, 629, 751, 796, 926, 938, 1292, 1571, 1735
HpyF3I	CTNAG	7 cut(s)	471, 1070, 1205, 1343, 1350, 1673, 1706
HpySE526I	ACGT	1 cut(s)	1383
Hsp92I	GRCGYC	2 cut(s)	203, 221
Hsp92II	CATG	8 cut(s)	280, 664, 1203, 1379, 1417, 1438, 1457, 1739
HspAI	GCGC	4 cut(s)	24, 203, 901, 1484
KasI	GGCGCC	1 cut(s)	202
KroI	GCCGGC	3 cut(s)	128, 211, 262
KroNI	GCCGGC	3 cut(s)	130, 213, 264
Ksp22I	TGATCA	1 cut(s)	895
Kzo9I	GATC	8 cut(s)	273, 516, 802, 895, 956, 1078, 1156, 1683
LmnI	GCTCC	3 cut(s)	192, 984, 1474
Lsp1109I	GCAGC	4 cut(s)	27, 234, 1165, 1304
LweI	GCATC	6 cut(s)	616, 628, 721, 805, 835, 1420
MaeI	CTAG	2 cut(s)	834, 1541
MaeII	ACGT	1 cut(s)	1383
MaeIII	GTNAC	1 cut(s)	1741
MalI	GATC	8 cut(s)	275, 518, 804, 897, 958, 1080, 1158, 1685
MbiI	CCGCTC	2 cut(s)	187, 1062
MboI	GATC	8 cut(s)	273, 516, 802, 895, 956, 1078, 1156, 1683
MflI	RGATCY	1 cut(s)	956
MhlI	GDGCHC	5 cut(s)	122, 185, 1039, 1335, 1351
MlsI	TGGCCA	1 cut(s)	41
MluNI	TGGCCA	1 cut(s)	41
Mly113I	GGCGCC	1 cut(s)	203
MlyI	GAGTC	2 cut(s)	178, 1451
MmeI	TCCRAC	1 cut(s)	1719
Mox20I	TGGCCA	1 cut(s)	41
Mph1103I	ATGCAT	1 cut(s)	631
MreI	CGCCGGCG	3 cut(s)	128, 211, 262
MroNI	GCCGGC	3 cut(s)	128, 211, 262
MscI	TGGCCA	1 cut(s)	41
MseI	TTAA	5 cut(s)	492, 758, 1089, 1190, 1463
MslI	CAYNNNNRTG	1 cut(s)	659
Msp20I	TGGCCA	1 cut(s)	41
MspA1I	CMGCKG	1 cut(s)	247
MspCI	CTTAAG	1 cut(s)	491
MspI	CCGG	9 cut(s)	107, 122, 129, 191, 195, 212, 263, 329, 1609
MspR9I	CCNGG	6 cut(s)	122, 191, 225, 347, 706, 1610
MvaI	CCWGG	3 cut(s)	225, 347, 706
MvnI	CGCG	2 cut(s)	284, 1484
NaeI	GCCGGC	3 cut(s)	130, 213, 264
NarI	GGCGCC	1 cut(s)	203
NciI	CCSGG	3 cut(s)	122, 191, 1610
NcoI	CCATGG	1 cut(s)	1199
NdeI	CATATG	1 cut(s)	1264
NdeII	GATC	8 cut(s)	273, 516, 802, 895, 956, 1078, 1156, 1683
NgoMIV	GCCGGC	3 cut(s)	128, 211, 262
NlaIII	CATG	8 cut(s)	280, 664, 1203, 1379, 1417, 1438, 1457, 1739
NlaIV	GGNNCC	4 cut(s)	204, 1368, 1476, 1653
NmeAIII	GCCGAG	2 cut(s)	446, 467
NmuCI	GTSAC	1 cut(s)	1741
NsiI	ATGCAT	1 cut(s)	631
PagI	TCATGA	2 cut(s)	1413, 1453
PceI	AGGCCT	1 cut(s)	892
PcsI	WCGNNNNNNNCGW	2 cut(s)	170, 1389
PdiI	GCCGGC	3 cut(s)	130, 213, 264
PfeI	GAWTC	4 cut(s)	607, 1046, 1053, 1645
PleI	GAGTC	2 cut(s)	177, 1450
PluTI	GGCGCC	1 cut(s)	206
PpsI	GAGTC	2 cut(s)	177, 1450
Ppu21I	YACGTR	1 cut(s)	1384
PpuMI	RGGWCCY	1 cut(s)	1652
Psp124BI	GAGCTC	1 cut(s)	1335
Psp5II	RGGWCCY	1 cut(s)	1652
Psp6I	CCWGG	3 cut(s)	223, 345, 704
PspGI	CCWGG	3 cut(s)	223, 345, 704
PspN4I	GGNNCC	4 cut(s)	204, 1368, 1476, 1653
PspPI	GGNCC	4 cut(s)	320, 439, 1104, 1652
PspPPI	RGGWCCY	1 cut(s)	1652
PstI	CTGCAG	1 cut(s)	17
PstNI	CAGNNNCTG	1 cut(s)	1680
PsuI	RGATCY	1 cut(s)	956
RsaI	GTAC	2 cut(s)	1531, 1576
RsaNI	GTAC	2 cut(s)	1530, 1575
RseI	CAYNNNNRTG	1 cut(s)	659
SacI	GAGCTC	1 cut(s)	1335
SaqAI	TTAA	5 cut(s)	492, 758, 1089, 1190, 1463
Sau3AI	GATC	8 cut(s)	273, 516, 802, 895, 956, 1078, 1156, 1683
Sau96I	GGNCC	4 cut(s)	320, 439, 1104, 1652
SchI	GAGTC	2 cut(s)	178, 1451
ScrFI	CCNGG	6 cut(s)	122, 191, 225, 347, 706, 1610
SduI	GDGCHC	5 cut(s)	122, 185, 1039, 1335, 1351
SfaNI	GCATC	6 cut(s)	616, 628, 721, 805, 835, 1420
SfcI	CTRYAG	2 cut(s)	13, 961
SfoI	GGCGCC	1 cut(s)	204
SgrAI	CRCCGGYG	4 cut(s)	106, 128, 211, 262
SinI	GGWCC	1 cut(s)	1652
SmiMI	CAYNNNNRTG	1 cut(s)	659
SmlI	CTYRAG	2 cut(s)	491, 1182
SmoI	CTYRAG	2 cut(s)	491, 1182
SseBI	AGGCCT	1 cut(s)	892
SspDI	GGCGCC	1 cut(s)	202
SspMI	CTAG	2 cut(s)	834, 1541
SstI	GAGCTC	1 cut(s)	1335
StuI	AGGCCT	1 cut(s)	892
StyD4I	CCNGG	6 cut(s)	120, 189, 223, 345, 704, 1608
StyI	CCWWGG	4 cut(s)	1100, 1199, 1311, 1714
TaaI	ACNGT	3 cut(s)	776, 965, 1111
TaiI	ACGT	1 cut(s)	1386
TaqI	TCGA	2 cut(s)	1392, 1445
TaqII	GACCGA	1 cut(s)	1713
TatI	WGTACW	2 cut(s)	1529, 1574
TauI	GCSGC	8 cut(s)	29, 106, 247, 253, 284, 295, 354, 1523
TfiI	GAWTC	4 cut(s)	607, 1046, 1053, 1645
Tru1I	TTAA	5 cut(s)	492, 758, 1089, 1190, 1463
Tru9I	TTAA	5 cut(s)	492, 758, 1089, 1190, 1463
TscAI	CASTG	2 cut(s)	970, 1116
TseFI	GTSAC	1 cut(s)	1741
TseI	GCWGC	5 cut(s)	12, 15, 247, 1178, 1292
Tsp45I	GTSAC	1 cut(s)	1741
TspDTI	ATGAA	6 cut(s)	1227, 1313, 1430, 1442, 1451, 1658
TspGWI	ACGGA	5 cut(s)	138, 162, 246, 554, 1765
TspRI	CASTG	2 cut(s)	970, 1116
Vha464I	CTTAAG	1 cut(s)	491
VpaK11BI	GGWCC	1 cut(s)	1652
XapI	RAATTY	7 cut(s)	416, 617, 696, 753, 817, 1420, 1727
XmiI	GTMKAC	2 cut(s)	651, 1024
XspI	CTAG	2 cut(s)	834, 1541
Zsp2I	ATGCAT	1 cut(s)	631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.