Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0001412

Physical Location & Seq

Genomic Coordinates Reverse (-)

65747992 .. 65752331

Gene Structure 4340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG448600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGGGCATTGCTGCAGCAAAAGCGCCGCCGTTTCGGTGGCCAACAACAACCACGAACACCCGACCCCCGCCTCCGCCGTCGCCGTCCAGCAGTCTAAACAGCCGCCGGTGCCGACGAGCCCGGTCGCCGGCGATGTGAAGAACACTCCGTCTCACTCATTTACGGCGAGTCCGTTCCCGAGCCCGCTCCCGGCCGGAGTGGCGCCGTCGCCGGCGAGGACGCCAGGGAGGAAGTTCAGGTGGCCGTTGCCGCCTCCGTCTCCGGCGAAGCCGATCATGGCCGCGTTTCGGCGGCGGAGGGAGGCGAAGCCGAAGGACGGGCCGATACCGGAGGAGAATAATCACCAGGGCGGCGAAGAAGAAGGAGAGAGGGGGCTGGACAAGAGCTTTGGGTATGGGAAGAACTTTGGGGCGAAATTTGAATTGGGGAAGGAGGTGGGCCGAGGGCATTTTGGTCATACTTGCTCGGCAAAGGGAAAGAAGGGAGAGCTTAAGGGTCAGCCTGTGGCTGTCAAGATCATATCCAAAGCAAAGATGACAACAGCAATAGCTATTGAAGATGTCCGTAGAGAGGTGAAAATACTGAAAGCATTATCTGGACATAAGAATCTGGTCAAATTTTATGATGCATTTGAGGATGCCAATAATGTCTACATAGTCATGGAGTTGTGTGAAGGTGGAGAACTACTGGATAAAATTTTGTCCAGGGGTGGAAGATACACAGAAGAAGATGCTAAAGTTATTGTTGTGCAAATTTTAAGTGTTGTTGCCTACTGTCATCTTCAAGGTGTTGTGCATCGTGATCTAAAGCCAGAGTTCTCGTCCGAACCTATTACCAATTACTCTTTTCATTTGACTGCTTGGCAGAATTTTCTTTTTGCCACTAGAGAAGAGGATGCTTCAATGAGGTTATTTTGTTTTGATCTATCTGCTGTCTTCACAGCCCACCCATGGCTAAGGGATGAAAGACGAGCTGTGTCTTTAGATTTAGTAATCTACAAGTTGGTTAGGTCATATGTTCGTGCCACACCTTTCAGGCGTGCAGCAATGAAGGCTCTTTCCAAGGCTATAACAGAAGATGAGCTCTACTATCTTAGGGCTCAGTTTACACTCTTGGAACCCAAACATGGATACGTGTCCCTCGATAATTTCAGAACGGCTCTCATGAAAAATTCAACTGATGCCATGAAGGAGTCGAGGGTTCATGACATCATAAATGTGATGGAGCCACTCGCGCACAAGAAATTGGACTTTGAAGAGTTCTGCGTTGCCGCAATAAGTACATATCAGCTAGAAGCTCTTGAAGGGTGGGAGAAGATTGCAAGTACAGCTTTTGAGTGTTTTGAAAGGGAAGGAAACCGGGTCATCTCTGTTGAGGAGTTGGCACAGGAAATGAATCTGGGTCCTACATCTTACTCTCTACTCAGAGACTGGATCAGAACCTCCGACCGAAAACTTAGCTTCCTTGGATACACCAAATTTTTGCATGGTGTGACAATACGTACTTCCAATACCAGACACCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

508

Amino Acids

56.84

Weight (kDa)

9.03

Isoelectric Point (pI)

44.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	140 - 272	4.7e-32	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	141 - 269	1.5e-20	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49370 AT5G24430
fragaria_vesca	FvH4_7g32610 FvH4_7g32610
malus_domestica	MD01G1227200.v1.1 MD07G1297500.v1.1
prunus_persica	Prupe.2G317200_v2.0.a1 Prupe.2G317200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0382501 RchiOBHm_Chr2g0138551 RchiOBHm_Chr2g0138561 RchiOBHm_Chr2g0161821 RchiOBHm_Chr6g0303421
rosa_laevigata	RLG00000007574 RLG00000010752 RLG00000023924 RLG00000026171 RLG00000031079 RLG00000034979 RLG00000035703 RLG00000036307
rosa_multiflora	Rmu_sc0000110.1_g000053 Rmu_sc0000110.1_g000055 Rmu_sc0003696.1_g000002 Rmu_sc0029402.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111900 Rroxscaffold_4G00278000 Rroxscaffold_7G00202700
rosa_rugosa	Rorug01G0435000
rosa_samantha	Rh1AG262900 Rh1AG460000 Rh1BG182300 Rh1BG416200 Rh1CG430000 Rh1DG212400 Rh1DG448600 Rh2AG553600 Rh2BG637900 Rh4AG140900 Rh4CG147700 Rh4CG147800 Rh5CG368300 Rh5CG374200 Rh6AG435500 Rh6CG169600 Rh6CG190900 Rh6DG161600 Rh7BG358800 Rh7CG197800 Rh7CG451800
rosa_wichuraiana	Rw1G001490 Rw1G041160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	109, 202
AccBSI	CCGCTC	1 cut(s)	187
AccI	GTMKAC	1 cut(s)	651
AccII	CGCG	2 cut(s)	284, 1235
AclWI	GGATC	1 cut(s)	1442
AcoI	YGGCCR	4 cut(s)	39, 192, 242, 279
AcsI	RAATTY	7 cut(s)	416, 617, 696, 753, 868, 1171, 1478
AcyI	GRCGYC	2 cut(s)	203, 221
AfaI	GTAC	3 cut(s)	1282, 1327, 1504
AfiI	CCNNNNNNNGG	7 cut(s)	128, 190, 288, 317, 571, 951, 1127
AflII	CTTAAG	1 cut(s)	491
AflIII	ACRYGT	1 cut(s)	1134
AgsI	TTSAA	8 cut(s)	422, 557, 785, 903, 1176, 1256, 1304, 1346
AjnI	CCWGG	3 cut(s)	223, 345, 704
AjuI	GAANNNNNNNTTGG	2 cut(s)	407, 439
AluBI	AGCT	9 cut(s)	387, 490, 551, 974, 1084, 1291, 1298, 1331, 1461
AluI	AGCT	9 cut(s)	387, 490, 551, 974, 1084, 1291, 1298, 1331, 1461
Alw21I	GWGCWC	1 cut(s)	1086
Alw26I	GTCTC	3 cut(s)	156, 264, 1422
AlwI	GGATC	1 cut(s)	1442
AlwNI	CAGNNNCTG	1 cut(s)	1431
Ama87I	CYCGRG	1 cut(s)	178
AoxI	GGCC	6 cut(s)	39, 192, 242, 279, 320, 439
ApeKI	GCWGC	3 cut(s)	12, 15, 1043
ApoI	RAATTY	7 cut(s)	416, 617, 696, 753, 868, 1171, 1478
ArsI	GACNNNNNNTTYG	2 cut(s)	371, 403
AspLEI	GCGC	3 cut(s)	26, 205, 1237
AspS9I	GGNCC	3 cut(s)	320, 439, 1403
AsuC2I	CCSGG	3 cut(s)	122, 191, 1361
AsuHPI	GGTGA	2 cut(s)	335, 586
AvaI	CYCGRG	1 cut(s)	178
AvaII	GGWCC	1 cut(s)	1403
BalI	TGGCCA	1 cut(s)	41
BanI	GGYRCC	2 cut(s)	109, 202
BanII	GRGCYC	4 cut(s)	122, 185, 1086, 1102
BbsI	GAAGAC	1 cut(s)	928
Bbv12I	GWGCWC	1 cut(s)	1086
BbvI	GCAGC	2 cut(s)	27, 1055
BccI	CCATC	1 cut(s)	1216
BceAI	ACGGC	7 cut(s)	14, 62, 68, 180, 190, 229, 1173
BciT130I	CCWGG	3 cut(s)	225, 347, 706
BciVI	GTATCC	2 cut(s)	1124, 1463
BcnI	CCSGG	3 cut(s)	122, 191, 1361
BcoDI	GTCTC	3 cut(s)	156, 264, 1422
BfaI	CTAG	2 cut(s)	885, 1292
BfmI	CTRYAG	1 cut(s)	13
BfoI	RGCGCY	2 cut(s)	27, 206
BfrI	CTTAAG	1 cut(s)	491
BfuI	GTATCC	2 cut(s)	1124, 1463
BglI	GCCNNNNNGGC	1 cut(s)	200
Bme1390I	CCNGG	6 cut(s)	122, 191, 225, 347, 706, 1361
Bme18I	GGWCC	1 cut(s)	1403
BmeT110I	CYCGRG	1 cut(s)	178
BmgT120I	GGNCC	3 cut(s)	320, 439, 1403
BmiI	GGNNCC	5 cut(s)	111, 204, 1119, 1227, 1404
BmrFI	CCNGG	6 cut(s)	122, 191, 225, 347, 706, 1361
BmsI	GCATC	6 cut(s)	616, 628, 721, 805, 886, 1171
BpiI	GAAGAC	1 cut(s)	928
Bpu10I	CCTNAGC	1 cut(s)	956
BpuMI	CCSGG	3 cut(s)	122, 191, 1361
BsaAI	YACGTR	2 cut(s)	1135, 1502
BsaHI	GRCGYC	2 cut(s)	203, 221
BsaJI	CCNNGG	7 cut(s)	224, 346, 442, 705, 950, 1062, 1465
BsaWI	WCCGGW	1 cut(s)	328
Bsc4I	CCNNNNNNNGG	7 cut(s)	128, 190, 288, 317, 571, 951, 1127
Bse118I	RCCGGY	3 cut(s)	106, 128, 211
Bse1I	ACTGG	2 cut(s)	693, 1436
Bse3DI	GCAATG	2 cut(s)	7, 1053
BseBI	CCWGG	3 cut(s)	225, 347, 706
BseDI	CCNNGG	7 cut(s)	224, 346, 442, 705, 950, 1062, 1465
BseGI	GGATG	3 cut(s)	643, 901, 967
BseLI	CCNNNNNNNGG	7 cut(s)	128, 190, 288, 317, 571, 951, 1127
BseMI	GCAATG	2 cut(s)	7, 1053
BseMII	CTCAG	2 cut(s)	1115, 1438
BseNI	ACTGG	2 cut(s)	693, 1436
BseRI	GAGGAG	2 cut(s)	347, 1391
BseX3I	CGGCCG	1 cut(s)	192
BseXI	GCAGC	2 cut(s)	27, 1055
BsgI	GTGCAG	1 cut(s)	1062
Bsh1236I	CGCG	2 cut(s)	284, 1235
Bsh1285I	CGRYCG	3 cut(s)	126, 195, 1450
BshFI	GGCC	6 cut(s)	41, 194, 244, 281, 322, 441
BshNI	GGYRCC	2 cut(s)	109, 202
BsiEI	CGRYCG	3 cut(s)	126, 195, 1450
BsiHKAI	GWGCWC	1 cut(s)	1086
BsiHKCI	CYCGRG	1 cut(s)	178
BsiSI	CCGG	9 cut(s)	107, 122, 129, 191, 195, 212, 263, 329, 1360
BslFI	GGGAC	1 cut(s)	1123
BslI	CCNNNNNNNGG	7 cut(s)	128, 190, 288, 317, 571, 951, 1127
BsmAI	GTCTC	3 cut(s)	156, 264, 1422
BsmBI	CGTCTC	2 cut(s)	156, 264
BsmFI	GGGAC	1 cut(s)	1123
BsnI	GGCC	6 cut(s)	41, 194, 244, 281, 322, 441
BsoBI	CYCGRG	1 cut(s)	178
Bsp1286I	GDGCHC	4 cut(s)	122, 185, 1086, 1102
Bsp143I	GATC	5 cut(s)	273, 516, 802, 922, 1434
Bsp19I	CCATGG	1 cut(s)	950
BspANI	GGCC	6 cut(s)	41, 194, 244, 281, 322, 441
BspCNI	CTCAG	2 cut(s)	1114, 1437
BspFNI	CGCG	2 cut(s)	284, 1235
BspHI	TCATGA	2 cut(s)	1164, 1204
BspLI	GGNNCC	5 cut(s)	111, 204, 1119, 1227, 1404
BspMAI	CTGCAG	1 cut(s)	17
BspPI	GGATC	1 cut(s)	1442
BspT107I	GGYRCC	2 cut(s)	109, 202
BspTI	CTTAAG	1 cut(s)	491
BsrBI	CCGCTC	1 cut(s)	187
BsrDI	GCAATG	2 cut(s)	7, 1053
BsrFI	RCCGGY	3 cut(s)	106, 128, 211
BsrI	ACTGG	2 cut(s)	693, 1436
BssAI	RCCGGY	3 cut(s)	106, 128, 211
BssECI	CCNNGG	7 cut(s)	224, 346, 442, 705, 950, 1062, 1465
BssMI	GATC	5 cut(s)	273, 516, 802, 922, 1434
BssNI	GRCGYC	2 cut(s)	203, 221
BssT1I	CCWWGG	3 cut(s)	950, 1062, 1465
Bst2UI	CCWGG	3 cut(s)	225, 347, 706
Bst4CI	ACNGT	1 cut(s)	776
Bst6I	CTCTTC	2 cut(s)	885, 1251
BstACI	GRCGYC	2 cut(s)	203, 221
BstAFI	CTTAAG	1 cut(s)	491
BstBAI	YACGTR	2 cut(s)	1135, 1502
BstC8I	GCNNGC	4 cut(s)	130, 185, 213, 1041
BstDEI	CTNAG	5 cut(s)	956, 1094, 1101, 1424, 1457
BstDSI	CCRYGG	1 cut(s)	950
BstF5I	GGATG	3 cut(s)	643, 901, 967
BstFNI	CGCG	2 cut(s)	284, 1235
BstH2I	RGCGCY	2 cut(s)	27, 206
BstHHI	GCGC	3 cut(s)	26, 205, 1237
BstKTI	GATC	5 cut(s)	276, 519, 805, 925, 1437
BstMAI	GTCTC	3 cut(s)	156, 264, 1422
BstMBI	GATC	5 cut(s)	273, 516, 802, 922, 1434
BstMCI	CGRYCG	3 cut(s)	126, 195, 1450
BstMWI	GCNNNNNNNGC	7 cut(s)	21, 109, 200, 250, 1052, 1234, 1328
BstNI	CCWGG	3 cut(s)	225, 347, 706
BstSCI	CCNGG	6 cut(s)	120, 189, 223, 345, 704, 1359
BstSFI	CTRYAG	1 cut(s)	13
BstSNI	TACGTA	1 cut(s)	1502
BstUI	CGCG	2 cut(s)	284, 1235
BstV1I	GCAGC	2 cut(s)	27, 1055
BstV2I	GAAGAC	1 cut(s)	928
BstZI	CGGCCG	1 cut(s)	192
BsuI	GTATCC	2 cut(s)	1124, 1463
BsuRI	GGCC	6 cut(s)	41, 194, 244, 281, 322, 441
BtgI	CCRYGG	1 cut(s)	950
BtgZI	GCGATG	1 cut(s)	147
BtsCI	GGATG	3 cut(s)	643, 901, 967
Cac8I	GCNNGC	4 cut(s)	130, 185, 213, 1041
CaiI	CAGNNNCTG	1 cut(s)	1431
CciI	TCATGA	2 cut(s)	1164, 1204
CfoI	GCGC	3 cut(s)	26, 205, 1237
Cfr10I	RCCGGY	3 cut(s)	106, 128, 211
Cfr13I	GGNCC	3 cut(s)	320, 439, 1403
CseI	GACGC	1 cut(s)	229
Csp6I	GTAC	3 cut(s)	1281, 1326, 1503
CviAII	CATG	8 cut(s)	277, 661, 951, 1127, 1165, 1186, 1205, 1487
CviQI	GTAC	3 cut(s)	1281, 1326, 1503
DdeI	CTNAG	5 cut(s)	956, 1094, 1101, 1424, 1457
DinI	GGCGCC	1 cut(s)	204
DpnI	GATC	5 cut(s)	275, 518, 804, 924, 1436
DpnII	GATC	5 cut(s)	273, 516, 802, 922, 1434
EaeI	YGGCCR	4 cut(s)	39, 192, 242, 279
EagI	CGGCCG	1 cut(s)	192
Eam1104I	CTCTTC	2 cut(s)	885, 1251
EarI	CTCTTC	2 cut(s)	885, 1251
EciI	GGCGGA	2 cut(s)	64, 310
Ecl136II	GAGCTC	1 cut(s)	1084
EclXI	CGGCCG	1 cut(s)	192
Eco105I	TACGTA	1 cut(s)	1502
Eco130I	CCWWGG	3 cut(s)	950, 1062, 1465
Eco24I	GRGCYC	4 cut(s)	122, 185, 1086, 1102
Eco47I	GGWCC	1 cut(s)	1403
Eco52I	CGGCCG	1 cut(s)	192
Eco53kI	GAGCTC	1 cut(s)	1084
Eco88I	CYCGRG	1 cut(s)	178
EcoICRI	GAGCTC	1 cut(s)	1084
EcoO109I	RGGNCCY	1 cut(s)	1403
EcoRII	CCWGG	3 cut(s)	223, 345, 704
EcoT14I	CCWWGG	3 cut(s)	950, 1062, 1465
EcoT22I	ATGCAT	1 cut(s)	631
EcoT38I	GRGCYC	4 cut(s)	122, 185, 1086, 1102
EgeI	GGCGCC	1 cut(s)	204
EheI	GGCGCC	1 cut(s)	204
ErhI	CCWWGG	3 cut(s)	950, 1062, 1465
Esp3I	CGTCTC	2 cut(s)	156, 264
FaeI	CATG	8 cut(s)	280, 664, 954, 1130, 1168, 1189, 1208, 1490
FalI	AAGNNNNNCTT	2 cut(s)	1315, 1347
FaqI	GGGAC	1 cut(s)	1123
FatI	CATG	8 cut(s)	276, 660, 950, 1126, 1164, 1185, 1204, 1486
FauI	CCCGC	2 cut(s)	76, 192
FauNDI	CATATG	1 cut(s)	1015
FblI	GTMKAC	1 cut(s)	651
FokI	GGATG	3 cut(s)	650, 908, 974
FriOI	GRGCYC	4 cut(s)	122, 185, 1086, 1102
FspBI	CTAG	2 cut(s)	885, 1292
GlaI	GCGC	3 cut(s)	25, 204, 1236
HaeII	RGCGCY	2 cut(s)	27, 206
HaeIII	GGCC	6 cut(s)	41, 194, 244, 281, 322, 441
HapII	CCGG	9 cut(s)	107, 122, 129, 191, 195, 212, 263, 329, 1360
HgaI	GACGC	1 cut(s)	229
HhaI	GCGC	3 cut(s)	26, 205, 1237
Hin1I	GRCGYC	2 cut(s)	203, 221
Hin1II	CATG	8 cut(s)	280, 664, 954, 1130, 1168, 1189, 1208, 1490
Hin6I	GCGC	3 cut(s)	24, 203, 1235
HinP1I	GCGC	3 cut(s)	24, 203, 1235
HinfI	GANTC	4 cut(s)	169, 607, 1193, 1396
HpaII	CCGG	9 cut(s)	107, 122, 129, 191, 195, 212, 263, 329, 1360
HphI	GGTGA	2 cut(s)	335, 586
Hpy166II	GTNNAC	2 cut(s)	652, 1107
Hpy188I	TCNGA	5 cut(s)	826, 1154, 1427, 1439, 1447
Hpy188III	TCNNGA	7 cut(s)	178, 514, 597, 800, 1165, 1205, 1301
Hpy8I	GTNNAC	2 cut(s)	652, 1107
Hpy99I	CGWCG	3 cut(s)	83, 118, 211
HpyAV	CCTTC	9 cut(s)	307, 356, 424, 475, 668, 1045, 1183, 1298, 1346
HpyCH4III	ACNGT	1 cut(s)	776
HpyCH4IV	ACGT	2 cut(s)	1134, 1501
HpyCH4V	TGCA	7 cut(s)	15, 629, 751, 796, 1043, 1322, 1486
HpyF10VI	GCNNNNNNNGC	7 cut(s)	21, 109, 200, 250, 1052, 1234, 1328
HpyF3I	CTNAG	5 cut(s)	956, 1094, 1101, 1424, 1457
HpySE526I	ACGT	2 cut(s)	1134, 1501
Hsp92I	GRCGYC	2 cut(s)	203, 221
Hsp92II	CATG	8 cut(s)	280, 664, 954, 1130, 1168, 1189, 1208, 1490
HspAI	GCGC	3 cut(s)	24, 203, 1235
KasI	GGCGCC	1 cut(s)	202
KroI	GCCGGC	2 cut(s)	128, 211
KroNI	GCCGGC	2 cut(s)	130, 213
Kzo9I	GATC	5 cut(s)	273, 516, 802, 922, 1434
LmnI	GCTCC	2 cut(s)	192, 1225
Lsp1109I	GCAGC	2 cut(s)	27, 1055
LweI	GCATC	6 cut(s)	616, 628, 721, 805, 886, 1171
MaeI	CTAG	2 cut(s)	885, 1292
MaeII	ACGT	2 cut(s)	1134, 1501
MaeIII	GTNAC	1 cut(s)	1492
MalI	GATC	5 cut(s)	275, 518, 804, 924, 1436
MbiI	CCGCTC	1 cut(s)	187
MboI	GATC	5 cut(s)	273, 516, 802, 922, 1434
MhlI	GDGCHC	4 cut(s)	122, 185, 1086, 1102
MlsI	TGGCCA	1 cut(s)	41
MluNI	TGGCCA	1 cut(s)	41
Mly113I	GGCGCC	1 cut(s)	203
MlyI	GAGTC	2 cut(s)	178, 1202
MmeI	TCCRAC	1 cut(s)	1470
Mox20I	TGGCCA	1 cut(s)	41
Mph1103I	ATGCAT	1 cut(s)	631
MreI	CGCCGGCG	2 cut(s)	128, 211
MroNI	GCCGGC	2 cut(s)	128, 211
MscI	TGGCCA	1 cut(s)	41
MseI	TTAA	2 cut(s)	492, 758
MslI	CAYNNNNRTG	2 cut(s)	659, 1217
Msp20I	TGGCCA	1 cut(s)	41
MspCI	CTTAAG	1 cut(s)	491
MspI	CCGG	9 cut(s)	107, 122, 129, 191, 195, 212, 263, 329, 1360
MspR9I	CCNGG	6 cut(s)	122, 191, 225, 347, 706, 1361
MvaI	CCWGG	3 cut(s)	225, 347, 706
MvnI	CGCG	2 cut(s)	284, 1235
MwoI	GCNNNNNNNGC	7 cut(s)	21, 109, 200, 250, 1052, 1234, 1328
NaeI	GCCGGC	2 cut(s)	130, 213
NarI	GGCGCC	1 cut(s)	203
NciI	CCSGG	3 cut(s)	122, 191, 1361
NcoI	CCATGG	1 cut(s)	950
NdeI	CATATG	1 cut(s)	1015
NdeII	GATC	5 cut(s)	273, 516, 802, 922, 1434
NgoMIV	GCCGGC	2 cut(s)	128, 211
NlaIII	CATG	8 cut(s)	280, 664, 954, 1130, 1168, 1189, 1208, 1490
NlaIV	GGNNCC	5 cut(s)	111, 204, 1119, 1227, 1404
NmeAIII	GCCGAG	2 cut(s)	446, 467
NmuCI	GTSAC	1 cut(s)	1492
NsiI	ATGCAT	1 cut(s)	631
PagI	TCATGA	2 cut(s)	1164, 1204
PcsI	WCGNNNNNNNCGW	2 cut(s)	170, 1140
PdiI	GCCGGC	2 cut(s)	130, 213
PfeI	GAWTC	2 cut(s)	607, 1396
PleI	GAGTC	2 cut(s)	177, 1201
PluTI	GGCGCC	1 cut(s)	206
PpsI	GAGTC	2 cut(s)	177, 1201
Ppu21I	YACGTR	2 cut(s)	1135, 1502
PpuMI	RGGWCCY	1 cut(s)	1403
Psp124BI	GAGCTC	1 cut(s)	1086
Psp5II	RGGWCCY	1 cut(s)	1403
Psp6I	CCWGG	3 cut(s)	223, 345, 704
PspGI	CCWGG	3 cut(s)	223, 345, 704
PspN4I	GGNNCC	5 cut(s)	111, 204, 1119, 1227, 1404
PspPI	GGNCC	3 cut(s)	320, 439, 1403
PspPPI	RGGWCCY	1 cut(s)	1403
PstI	CTGCAG	1 cut(s)	17
PstNI	CAGNNNCTG	1 cut(s)	1431
RsaI	GTAC	3 cut(s)	1282, 1327, 1504
RsaNI	GTAC	3 cut(s)	1281, 1326, 1503
RseI	CAYNNNNRTG	2 cut(s)	659, 1217
SacI	GAGCTC	1 cut(s)	1086
SaqAI	TTAA	2 cut(s)	492, 758
Sau3AI	GATC	5 cut(s)	273, 516, 802, 922, 1434
Sau96I	GGNCC	3 cut(s)	320, 439, 1403
SchI	GAGTC	2 cut(s)	178, 1202
ScrFI	CCNGG	6 cut(s)	122, 191, 225, 347, 706, 1361
SduI	GDGCHC	4 cut(s)	122, 185, 1086, 1102
SfaNI	GCATC	6 cut(s)	616, 628, 721, 805, 886, 1171
SfcI	CTRYAG	1 cut(s)	13
SfoI	GGCGCC	1 cut(s)	204
SgrAI	CRCCGGYG	3 cut(s)	106, 128, 211
SinI	GGWCC	1 cut(s)	1403
SmiMI	CAYNNNNRTG	2 cut(s)	659, 1217
SmlI	CTYRAG	1 cut(s)	491
SmoI	CTYRAG	1 cut(s)	491
SnaBI	TACGTA	1 cut(s)	1502
SspDI	GGCGCC	1 cut(s)	202
SspMI	CTAG	2 cut(s)	885, 1292
SstI	GAGCTC	1 cut(s)	1086
StyD4I	CCNGG	6 cut(s)	120, 189, 223, 345, 704, 1359
StyI	CCWWGG	3 cut(s)	950, 1062, 1465
TaaI	ACNGT	1 cut(s)	776
TaiI	ACGT	2 cut(s)	1137, 1504
TaqI	TCGA	2 cut(s)	1143, 1196
TaqII	GACCGA	1 cut(s)	1464
TatI	WGTACW	2 cut(s)	1280, 1325
TauI	GCSGC	7 cut(s)	29, 106, 253, 284, 295, 354, 1274
TfiI	GAWTC	2 cut(s)	607, 1396
Tru1I	TTAA	2 cut(s)	492, 758
Tru9I	TTAA	2 cut(s)	492, 758
TseFI	GTSAC	1 cut(s)	1492
TseI	GCWGC	3 cut(s)	12, 15, 1043
Tsp45I	GTSAC	1 cut(s)	1492
TspDTI	ATGAA	7 cut(s)	839, 978, 1064, 1181, 1193, 1202, 1409
TspGWI	ACGGA	4 cut(s)	138, 162, 246, 554
Vha464I	CTTAAG	1 cut(s)	491
VpaK11BI	GGWCC	1 cut(s)	1403
XapI	RAATTY	7 cut(s)	416, 617, 696, 753, 868, 1171, 1478
XmiI	GTMKAC	1 cut(s)	651
XspI	CTAG	2 cut(s)	885, 1292
Zsp2I	ATGCAT	1 cut(s)	631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.