Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001412

Physical Location & Seq

Genomic Coordinates Reverse (-)

35732420 .. 35736792

Gene Structure 4373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1297500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGGACTTTGCTGCAGCAAGAACGTCGCCGTTTCCGGGGCCGACAACGAGCCCACCGCCGCCCATCAGTCAAAACACTCGCCAGTAGCGCCCGTGCCGCCCAGCCCCAGACCCGGCGATGATCACTCCGGCAAGCACACTCCGGCTAACTCTTTCTCCGCGAGCCCGTGCCCCAGTCCGCTTCCAGCTGGAATTGCCCCGTCGCCGGCCAGGACACCGGGTAGGAAGTTTCGGTGGCCTCTGCCTCCGCCGTCGCCGGCGAAGCCGATCATGGAGGCCATTCGTCGGCGGCAGGGGCGCGAGGCGAAGCCAAAGGACGGGCCGATACCGGAGGAGCATCAGGGCGGCGAGGAAGGCGAGGGAGGAGAGAGAGCACTGGACAAGAGCTTTGGGTATGGGAAGAACATTGGGGCGAAGTTTGAGCTGGGGAAAATGGTGGGTCGAGGCCATTTTGGTCATACTTGCTGGGCCAAGGGCAAGAAAGGAGAGCTCAAAGGACAGCCGGTCGCCGTCAAGATCATAGCCAAAGCGAAGATGACAACCGCAATAGCTATTGAAGATGTTCGTAGAGAGGTGAAAATACTGAAAGCATTAGCTGGACATAAGAATCTGGTCAGATTTTACGATGCGTTTGAGGATGCCCATAATGTCTACATTGTCATGGAGTTGTGTGAAGGTGGAGAACTACTGGATAGGATTTTGTCGAGGGGTGGAAGATACACAGAAGAGGACGCTAAAACTATTGTTGTGCAAATTTTAAGTGTTGTTTCCTTCTGTCATCTCCAAGGTGTTGTACACCGTGATCTAAAACCGGAGAATTTTCTTTTCAAAACAAGAGATGAGGATGCTCCATTGAAGGTTATTGATTTTGGTCTCTCTGACTTTACTAGGCCCGATCAACGCCTCAATGATATTGTTGGAAGTGCATACTATGTTGCACCTGAGGTGTTACATAGATCTTACAGTCTCGAAGCAGATATGTGGAGCATTGGTGTCATAACATATATATTGCTATGTGGAAGTAGACCTTTCTGGGCACGAACTGAATCTGGAATCTTTCGTTCAGTGCTAAGAGCTGATCCTAACTTTGATGATTCACCTTGGCCTTCAGTGTCCTCGGAAGCCAAAGATTTTCTCAAAAGGCTTCTGAACAAGGACCACAGAAAAAGAATGACTGCTGCCCAAGCTTTATCTCACCCATGGTTACGAGATGAAAACCGTGATGTGCCTTTAGATATTTTAATCTACAAGTTGGTTAAGTCATATGTTCGGTCCTCACCTTTGAAGCGTGCAGCACTAAAGGCCCTCTCCAAAGCTATAACAGAAGACGAGCTCTTCTACCTTAGGGCTCAATTTAGACTCTTGGATCCAAAACAAGGATATGTGTCCCTTGATAATTTCAAAACGGCCCTCATGAGAAATGCAACTGATGCCATGAAGGAGTCGAGGGTTCATGACTTTATAAAATTGATGGAACCACTCTCACACAAGAAATTGGACTTCGAAGAATTCTGCGTCGCTGCAATAAGTACATATCAGCTAGAAGCTCATGAAGGATGGGAGAACATTGCAAGTACGGCGTTTGAGTATTTTGAAAACGAAGGAAACCGGGTCATCACTGTTGAGGAGTTGGCACAGGAAATGAATCTGCTTCCTACATCTTATCAGTTACTCAATGACTGGATCCGAACTTCAGACCGAAAACTTTCCTTCCTTGGATACACCAAATTTTTGCATGGTGTGACAGTACGTAGTTCCAATACTAGACATCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

592

Amino Acids

66.29

Weight (kDa)

8.91

Isoelectric Point (pI)

46.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	140 - 402	9.7e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	141 - 395	1e-32	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	215 - 291	6.7e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49370 AT5G24430
fragaria_vesca	FvH4_7g32610 FvH4_7g32610
malus_domestica	MD01G1227200.v1.1 MD07G1297500.v1.1
prunus_persica	Prupe.2G317200_v2.0.a1 Prupe.2G317200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0382501 RchiOBHm_Chr2g0138551 RchiOBHm_Chr2g0138561 RchiOBHm_Chr2g0161821 RchiOBHm_Chr6g0303421
rosa_laevigata	RLG00000007574 RLG00000010752 RLG00000023924 RLG00000026171 RLG00000031079 RLG00000034979 RLG00000035703 RLG00000036307
rosa_multiflora	Rmu_sc0000110.1_g000053 Rmu_sc0000110.1_g000055 Rmu_sc0003696.1_g000002 Rmu_sc0029402.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111900 Rroxscaffold_4G00278000 Rroxscaffold_7G00202700
rosa_rugosa	Rorug01G0435000
rosa_samantha	Rh1AG262900 Rh1AG460000 Rh1BG182300 Rh1BG416200 Rh1CG430000 Rh1DG212400 Rh1DG448600 Rh2AG553600 Rh2BG637900 Rh4AG140900 Rh4CG147700 Rh4CG147800 Rh5CG368300 Rh5CG374200 Rh6AG435500 Rh6CG169600 Rh6CG190900 Rh6DG161600 Rh7BG358800 Rh7CG197800 Rh7CG451800
rosa_wichuraiana	Rw1G001490 Rw1G041160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1463
AccI	GTMKAC	2 cut(s)	651, 1024
AccII	CGCG	2 cut(s)	161, 300
AciI	CCGC	9 cut(s)	57, 60, 98, 159, 179, 248, 289, 345, 543
AclWI	GGATC	5 cut(s)	1073, 1361, 1374, 1678, 1691
AcoI	YGGCCR	1 cut(s)	207
AcsI	RAATTY	4 cut(s)	753, 817, 1508, 1727
AcuI	CTGAAG	2 cut(s)	1092, 1677
AfaI	GTAC	4 cut(s)	795, 1531, 1576, 1749
AfiI	CCNNNNNNNGG	6 cut(s)	36, 113, 205, 285, 317, 1376
AgsI	TTSAA	6 cut(s)	557, 829, 856, 1285, 1402, 1595
AhdI	GACNNNNNGTC	1 cut(s)	503
AjnI	CCWGG	1 cut(s)	209
Alw21I	GWGCWC	3 cut(s)	376, 492, 1335
Alw26I	GTCTC	2 cut(s)	878, 971
AlwI	GGATC	5 cut(s)	1073, 1361, 1374, 1678, 1691
ApeKI	GCWGC	5 cut(s)	12, 15, 1178, 1292, 1520
ApoI	RAATTY	4 cut(s)	753, 817, 1508, 1727
ArsI	GACNNNNNNTTYG	2 cut(s)	371, 403
Asp700I	GAANNNNTTC	2 cut(s)	561, 1705
AspLEI	GCGC	2 cut(s)	91, 300
AspS9I	GGNCC	8 cut(s)	39, 320, 468, 891, 1156, 1272, 1303, 1408
AsuC2I	CCSGG	4 cut(s)	37, 114, 219, 1610
AsuHPI	GGTGA	4 cut(s)	586, 1089, 1187, 1269
AsuII	TTCGAA	1 cut(s)	1503
AvaII	GGWCC	2 cut(s)	1156, 1272
AxyI	CCTNAGG	2 cut(s)	942, 1343
BaeGI	GKGCMC	2 cut(s)	173, 1039
BamHI	GGATCC	2 cut(s)	1366, 1683
BanII	GRGCYC	5 cut(s)	54, 167, 492, 1335, 1351
BbsI	GAAGAC	1 cut(s)	1332
Bbv12I	GWGCWC	3 cut(s)	376, 492, 1335
BbvI	GCAGC	4 cut(s)	27, 1165, 1304, 1507
BccI	CCATC	3 cut(s)	72, 1465, 1551
BceAI	ACGGC	5 cut(s)	14, 235, 494, 1422, 1593
BcgI	CGANNNNNNTGC	2 cut(s)	7, 41
BciT130I	CCWGG	1 cut(s)	211
BciVI	GTATCC	1 cut(s)	1712
BclI	TGATCA	1 cut(s)	121
BcnI	CCSGG	4 cut(s)	37, 114, 219, 1610
BcoDI	GTCTC	2 cut(s)	878, 971
BfaI	CTAG	3 cut(s)	888, 1541, 1764
BfmI	CTRYAG	1 cut(s)	13
BfoI	RGCGCY	1 cut(s)	92
BfuI	GTATCC	1 cut(s)	1712
BglII	AGATCT	1 cut(s)	956
BisI	GCNGC	9 cut(s)	13, 16, 60, 98, 290, 346, 1179, 1293, 1521
BlsI	GCNGC	9 cut(s)	14, 17, 61, 99, 291, 347, 1180, 1294, 1522
Bme1390I	CCNGG	5 cut(s)	37, 114, 211, 219, 1610
Bme18I	GGWCC	2 cut(s)	1156, 1272
BmeRI	GACNNNNNGTC	1 cut(s)	503
BmgT120I	GGNCC	8 cut(s)	39, 320, 468, 891, 1156, 1272, 1303, 1408
BmiI	GGNNCC	4 cut(s)	40, 1368, 1476, 1685
BmrFI	CCNGG	5 cut(s)	37, 114, 211, 219, 1610
BmrI	ACTGGG	1 cut(s)	168
BmsI	GCATC	5 cut(s)	346, 616, 628, 835, 1420
BmuI	ACTGGG	1 cut(s)	168
BpiI	GAAGAC	1 cut(s)	1332
Bpu14I	TTCGAA	1 cut(s)	1503
BpuMI	CCSGG	4 cut(s)	37, 114, 219, 1610
Bsa29I	ATCGAT	1 cut(s)	1771
BsaAI	YACGTR	1 cut(s)	1751
BsaI	GGTCTC	1 cut(s)	878
BsaJI	CCNNGG	7 cut(s)	36, 471, 784, 1100, 1116, 1199, 1714
BsaWI	WCCGGW	2 cut(s)	328, 811
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 976, 1006
Bsc4I	CCNNNNNNNGG	6 cut(s)	36, 113, 205, 285, 317, 1376
Bse118I	RCCGGY	3 cut(s)	205, 256, 502
Bse1I	ACTGG	5 cut(s)	83, 174, 381, 693, 1685
Bse21I	CCTNAGG	2 cut(s)	942, 1343
Bse3DI	GCAATG	1 cut(s)	1566
BseBI	CCWGG	1 cut(s)	211
BseCI	ATCGAT	1 cut(s)	1771
BseDI	CCNNGG	7 cut(s)	36, 471, 784, 1100, 1116, 1199, 1714
BseGI	GGATG	3 cut(s)	643, 850, 1562
BseLI	CCNNNNNNNGG	6 cut(s)	36, 113, 205, 285, 317, 1376
BseMI	GCAATG	1 cut(s)	1566
BseMII	CTCAG	1 cut(s)	933
BseNI	ACTGG	5 cut(s)	83, 174, 381, 693, 1685
BseRI	GAGGAG	3 cut(s)	347, 378, 1640
BseSI	GKGCMC	2 cut(s)	173, 1039
BseXI	GCAGC	4 cut(s)	27, 1165, 1304, 1507
BseYI	CCCAGC	3 cut(s)	101, 424, 465
BsgI	GTGCAG	1 cut(s)	1311
Bsh1236I	CGCG	2 cut(s)	161, 300
Bsh1285I	CGRYCG	1 cut(s)	507
BshVI	ATCGAT	1 cut(s)	1771
BsiEI	CGRYCG	1 cut(s)	507
BsiHKAI	GWGCWC	3 cut(s)	376, 492, 1335
BslFI	GGGAC	2 cut(s)	18, 1372
BslI	CCNNNNNNNGG	6 cut(s)	36, 113, 205, 285, 317, 1376
BsmAI	GTCTC	2 cut(s)	878, 971
BsmFI	GGGAC	2 cut(s)	18, 1372
Bso31I	GGTCTC	1 cut(s)	878
Bsp119I	TTCGAA	1 cut(s)	1503
Bsp1286I	GDGCHC	8 cut(s)	54, 167, 173, 376, 492, 1039, 1335, 1351
Bsp1407I	TGTACA	1 cut(s)	793
Bsp143I	GATC	9 cut(s)	121, 267, 516, 802, 895, 956, 1078, 1366, 1683
Bsp19I	CCATGG	1 cut(s)	1199
BspACI	CCGC	9 cut(s)	57, 60, 98, 159, 179, 248, 289, 345, 543
BspCNI	CTCAG	1 cut(s)	934
BspDI	ATCGAT	1 cut(s)	1771
BspFNI	CGCG	2 cut(s)	161, 300
BspHI	TCATGA	3 cut(s)	1413, 1453, 1549
BspLI	GGNNCC	4 cut(s)	40, 1368, 1476, 1685
BspMAI	CTGCAG	1 cut(s)	17
BspPI	GGATC	5 cut(s)	1073, 1361, 1374, 1678, 1691
BspQI	GCTCTTC	1 cut(s)	1340
BspT104I	TTCGAA	1 cut(s)	1503
BspTNI	GGTCTC	1 cut(s)	878
BsrDI	GCAATG	1 cut(s)	1566
BsrFI	RCCGGY	3 cut(s)	205, 256, 502
BsrGI	TGTACA	1 cut(s)	793
BsrI	ACTGG	5 cut(s)	83, 174, 381, 693, 1685
BssAI	RCCGGY	3 cut(s)	205, 256, 502
BssECI	CCNNGG	7 cut(s)	36, 471, 784, 1100, 1116, 1199, 1714
BssMI	GATC	9 cut(s)	121, 267, 516, 802, 895, 956, 1078, 1366, 1683
BssT1I	CCWWGG	5 cut(s)	471, 784, 1100, 1199, 1714
Bst2UI	CCWGG	1 cut(s)	211
Bst4CI	ACNGT	5 cut(s)	800, 965, 1220, 1621, 1747
Bst6I	CTCTTC	2 cut(s)	720, 1340
BstAPI	GCANNNNNTGC	1 cut(s)	1430
BstAUI	TGTACA	1 cut(s)	793
BstBAI	YACGTR	1 cut(s)	1751
BstBI	TTCGAA	1 cut(s)	1503
BstC8I	GCNNGC	5 cut(s)	134, 163, 207, 258, 1290
BstDEI	CTNAG	3 cut(s)	942, 1070, 1343
BstDSI	CCRYGG	1 cut(s)	1199
BstF5I	GGATG	3 cut(s)	643, 850, 1562
BstFNI	CGCG	2 cut(s)	161, 300
BstH2I	RGCGCY	1 cut(s)	92
BstHHI	GCGC	2 cut(s)	91, 300
BstKTI	GATC	9 cut(s)	124, 270, 519, 805, 898, 959, 1081, 1369, 1686
BstMAI	GTCTC	2 cut(s)	878, 971
BstMBI	GATC	9 cut(s)	121, 267, 516, 802, 895, 956, 1078, 1366, 1683
BstMCI	CGRYCG	1 cut(s)	507
BstNI	CCWGG	1 cut(s)	211
BstSCI	CCNGG	5 cut(s)	35, 112, 209, 217, 1608
BstSFI	CTRYAG	1 cut(s)	13
BstSLI	GKGCMC	2 cut(s)	173, 1039
BstSNI	TACGTA	1 cut(s)	1751
BstUI	CGCG	2 cut(s)	161, 300
BstV1I	GCAGC	4 cut(s)	27, 1165, 1304, 1507
BstV2I	GAAGAC	1 cut(s)	1332
BstX2I	RGATCY	3 cut(s)	956, 1366, 1683
BstYI	RGATCY	3 cut(s)	956, 1366, 1683
Bsu15I	ATCGAT	1 cut(s)	1771
Bsu36I	CCTNAGG	2 cut(s)	942, 1343
BsuI	GTATCC	1 cut(s)	1712
BsuTUI	ATCGAT	1 cut(s)	1771
BtgI	CCRYGG	1 cut(s)	1199
BtgZI	GCGATG	1 cut(s)	132
BtsCI	GGATG	3 cut(s)	643, 850, 1562
BtsIMutI	CAGTG	4 cut(s)	374, 1071, 1116, 1617
Cac8I	GCNNGC	5 cut(s)	134, 163, 207, 258, 1290
CciI	TCATGA	3 cut(s)	1413, 1453, 1549
CfoI	GCGC	2 cut(s)	91, 300
Cfr10I	RCCGGY	3 cut(s)	205, 256, 502
Cfr13I	GGNCC	8 cut(s)	39, 320, 468, 891, 1156, 1272, 1303, 1408
ClaI	ATCGAT	1 cut(s)	1771
CseI	GACGC	2 cut(s)	740, 1504
Csp6I	GTAC	4 cut(s)	794, 1530, 1575, 1748
CviAII	CATG	8 cut(s)	271, 661, 1200, 1414, 1435, 1454, 1550, 1736
CviQI	GTAC	4 cut(s)	794, 1530, 1575, 1748
DdeI	CTNAG	3 cut(s)	942, 1070, 1343
DpnI	GATC	9 cut(s)	123, 269, 518, 804, 897, 958, 1080, 1368, 1685
DpnII	GATC	9 cut(s)	121, 267, 516, 802, 895, 956, 1078, 1366, 1683
DriI	GACNNNNNGTC	1 cut(s)	503
EaeI	YGGCCR	1 cut(s)	207
Eam1104I	CTCTTC	2 cut(s)	720, 1340
Eam1105I	GACNNNNNGTC	1 cut(s)	503
EarI	CTCTTC	2 cut(s)	720, 1340
EciI	GGCGGA	1 cut(s)	237
Ecl136II	GAGCTC	2 cut(s)	490, 1333
Eco105I	TACGTA	1 cut(s)	1751
Eco130I	CCWWGG	5 cut(s)	471, 784, 1100, 1199, 1714
Eco24I	GRGCYC	5 cut(s)	54, 167, 492, 1335, 1351
Eco31I	GGTCTC	1 cut(s)	878
Eco47I	GGWCC	2 cut(s)	1156, 1272
Eco53kI	GAGCTC	2 cut(s)	490, 1333
Eco57I	CTGAAG	2 cut(s)	1092, 1677
Eco81I	CCTNAGG	2 cut(s)	942, 1343
EcoICRI	GAGCTC	2 cut(s)	490, 1333
EcoO109I	RGGNCCY	1 cut(s)	1303
EcoRI	GAATTC	1 cut(s)	1508
EcoRII	CCWGG	1 cut(s)	209
EcoT14I	CCWWGG	5 cut(s)	471, 784, 1100, 1199, 1714
EcoT38I	GRGCYC	5 cut(s)	54, 167, 492, 1335, 1351
ErhI	CCWWGG	5 cut(s)	471, 784, 1100, 1199, 1714
FaeI	CATG	8 cut(s)	274, 664, 1203, 1417, 1438, 1457, 1553, 1739
FalI	AAGNNNNNCTT	2 cut(s)	1012, 1044
FaqI	GGGAC	2 cut(s)	18, 1372
FatI	CATG	8 cut(s)	270, 660, 1199, 1413, 1434, 1453, 1549, 1735
FauNDI	CATATG	1 cut(s)	1264
FbaI	TGATCA	1 cut(s)	121
FblI	GTMKAC	2 cut(s)	651, 1024
Fnu4HI	GCNGC	9 cut(s)	13, 16, 60, 98, 290, 346, 1179, 1293, 1521
FokI	GGATG	3 cut(s)	650, 857, 1569
FriOI	GRGCYC	5 cut(s)	54, 167, 492, 1335, 1351
Fsp4HI	GCNGC	9 cut(s)	13, 16, 60, 98, 290, 346, 1179, 1293, 1521
FspBI	CTAG	3 cut(s)	888, 1541, 1764
GlaI	GCGC	2 cut(s)	90, 299
GluI	GCNGC	9 cut(s)	13, 16, 60, 98, 290, 346, 1179, 1293, 1521
GsaI	CCCAGC	3 cut(s)	105, 428, 469
HaeII	RGCGCY	1 cut(s)	92
HgaI	GACGC	2 cut(s)	740, 1504
HhaI	GCGC	2 cut(s)	91, 300
Hin1II	CATG	8 cut(s)	274, 664, 1203, 1417, 1438, 1457, 1553, 1739
Hin6I	GCGC	2 cut(s)	89, 298
HinP1I	GCGC	2 cut(s)	89, 298
HindIII	AAGCTT	1 cut(s)	1185
HinfI	GANTC	7 cut(s)	607, 1046, 1053, 1094, 1359, 1442, 1645
HphI	GGTGA	4 cut(s)	586, 1089, 1187, 1269
Hpy166II	GTNNAC	3 cut(s)	652, 796, 1025
Hpy188I	TCNGA	6 cut(s)	617, 880, 1120, 1149, 1688, 1696
Hpy188III	TCNNGA	6 cut(s)	514, 968, 1050, 1414, 1454, 1550
Hpy8I	GTNNAC	3 cut(s)	652, 796, 1025
Hpy99I	CGWCG	5 cut(s)	29, 205, 256, 288, 1520
HpyAV	CCTTC	9 cut(s)	347, 668, 781, 850, 1116, 1432, 1547, 1595, 1720
HpyCH4III	ACNGT	5 cut(s)	800, 965, 1220, 1621, 1747
HpyCH4IV	ACGT	2 cut(s)	24, 1750
HpyCH4V	TGCA	9 cut(s)	15, 751, 926, 938, 1292, 1424, 1523, 1571, 1735
HpyF3I	CTNAG	3 cut(s)	942, 1070, 1343
HpySE526I	ACGT	2 cut(s)	24, 1750
Hsp92II	CATG	8 cut(s)	274, 664, 1203, 1417, 1438, 1457, 1553, 1739
HspAI	GCGC	2 cut(s)	89, 298
KroI	GCCGGC	2 cut(s)	205, 256
KroNI	GCCGGC	2 cut(s)	207, 258
Ksp22I	TGATCA	1 cut(s)	121
Kzo9I	GATC	9 cut(s)	121, 267, 516, 802, 895, 956, 1078, 1366, 1683
LguI	GCTCTTC	1 cut(s)	1340
LmnI	GCTCC	3 cut(s)	334, 853, 984
Lsp1109I	GCAGC	4 cut(s)	27, 1165, 1304, 1507
LweI	GCATC	5 cut(s)	346, 616, 628, 835, 1420
MaeI	CTAG	3 cut(s)	888, 1541, 1764
MaeII	ACGT	2 cut(s)	24, 1750
MaeIII	GTNAC	4 cut(s)	948, 1203, 1668, 1741
MalI	GATC	9 cut(s)	123, 269, 518, 804, 897, 958, 1080, 1368, 1685
MboI	GATC	9 cut(s)	121, 267, 516, 802, 895, 956, 1078, 1366, 1683
MboII	GAAGA	8 cut(s)	412, 544, 569, 726, 737, 1327, 1337, 1517
MflI	RGATCY	3 cut(s)	956, 1366, 1683
MhlI	GDGCHC	8 cut(s)	54, 167, 173, 376, 492, 1039, 1335, 1351
MluCI	AATT	9 cut(s)	192, 753, 817, 1352, 1396, 1466, 1493, 1508, 1727
MlyI	GAGTC	2 cut(s)	1353, 1451
MmeI	TCCRAC	1 cut(s)	898
MreI	CGCCGGCG	1 cut(s)	256
MroNI	GCCGGC	2 cut(s)	205, 256
MroXI	GAANNNNTTC	2 cut(s)	561, 1705
MseI	TTAA	3 cut(s)	758, 1241, 1257
MslI	CAYNNNNRTG	1 cut(s)	659
MspA1I	CMGCKG	1 cut(s)	188
MspR9I	CCNGG	5 cut(s)	37, 114, 211, 219, 1610
MvaI	CCWGG	1 cut(s)	211
MvnI	CGCG	2 cut(s)	161, 300
NaeI	GCCGGC	2 cut(s)	207, 258
NciI	CCSGG	4 cut(s)	37, 114, 219, 1610
NcoI	CCATGG	1 cut(s)	1199
NdeI	CATATG	1 cut(s)	1264
NdeII	GATC	9 cut(s)	121, 267, 516, 802, 895, 956, 1078, 1366, 1683
NgoMIV	GCCGGC	2 cut(s)	205, 256
NlaIII	CATG	8 cut(s)	274, 664, 1203, 1417, 1438, 1457, 1553, 1739
NlaIV	GGNNCC	4 cut(s)	40, 1368, 1476, 1685
NmuCI	GTSAC	1 cut(s)	1741
NspV	TTCGAA	1 cut(s)	1503
PagI	TCATGA	3 cut(s)	1413, 1453, 1549
PciSI	GCTCTTC	1 cut(s)	1340
PdiI	GCCGGC	2 cut(s)	207, 258
PdmI	GAANNNNTTC	2 cut(s)	561, 1705
PfeI	GAWTC	5 cut(s)	607, 1046, 1053, 1094, 1645
PkrI	GCNGC	9 cut(s)	14, 17, 61, 99, 291, 347, 1180, 1294, 1522
PleI	GAGTC	2 cut(s)	1353, 1450
PpsI	GAGTC	2 cut(s)	1353, 1450
Ppu21I	YACGTR	1 cut(s)	1751
PsiI	TTATAA	1 cut(s)	1463
Psp124BI	GAGCTC	2 cut(s)	492, 1335
Psp6I	CCWGG	1 cut(s)	209
PspFI	CCCAGC	3 cut(s)	101, 424, 465
PspGI	CCWGG	1 cut(s)	209
PspN4I	GGNNCC	4 cut(s)	40, 1368, 1476, 1685
PspPI	GGNCC	8 cut(s)	39, 320, 468, 891, 1156, 1272, 1303, 1408
PstI	CTGCAG	1 cut(s)	17
PsuI	RGATCY	3 cut(s)	956, 1366, 1683
PvuII	CAGCTG	1 cut(s)	188
RsaI	GTAC	4 cut(s)	795, 1531, 1576, 1749
RsaNI	GTAC	4 cut(s)	794, 1530, 1575, 1748
RseI	CAYNNNNRTG	1 cut(s)	659
SacI	GAGCTC	2 cut(s)	492, 1335
SapI	GCTCTTC	1 cut(s)	1340
SaqAI	TTAA	3 cut(s)	758, 1241, 1257
SatI	GCNGC	9 cut(s)	13, 16, 60, 98, 290, 346, 1179, 1293, 1521
Sau3AI	GATC	9 cut(s)	121, 267, 516, 802, 895, 956, 1078, 1366, 1683
Sau96I	GGNCC	8 cut(s)	39, 320, 468, 891, 1156, 1272, 1303, 1408
SchI	GAGTC	2 cut(s)	1353, 1451
ScrFI	CCNGG	5 cut(s)	37, 114, 211, 219, 1610
SduI	GDGCHC	8 cut(s)	54, 167, 173, 376, 492, 1039, 1335, 1351
SfaNI	GCATC	5 cut(s)	346, 616, 628, 835, 1420
SfcI	CTRYAG	1 cut(s)	13
SfuI	TTCGAA	1 cut(s)	1503
SgrAI	CRCCGGYG	1 cut(s)	256
SinI	GGWCC	2 cut(s)	1156, 1272
SmiMI	CAYNNNNRTG	1 cut(s)	659
SnaBI	TACGTA	1 cut(s)	1751
Sse9I	AATT	9 cut(s)	192, 753, 817, 1352, 1396, 1466, 1493, 1508, 1727
SsiI	CCGC	9 cut(s)	57, 60, 98, 159, 179, 248, 289, 345, 543
SspMI	CTAG	3 cut(s)	888, 1541, 1764
SstI	GAGCTC	2 cut(s)	492, 1335
StyD4I	CCNGG	5 cut(s)	35, 112, 209, 217, 1608
StyI	CCWWGG	5 cut(s)	471, 784, 1100, 1199, 1714
TaaI	ACNGT	5 cut(s)	800, 965, 1220, 1621, 1747
TaiI	ACGT	2 cut(s)	27, 1753
TaqI	TCGA	6 cut(s)	442, 704, 969, 1445, 1503, 1771
TaqII	GACCGA	2 cut(s)	1260, 1713
TasI	AATT	9 cut(s)	192, 753, 817, 1352, 1396, 1466, 1493, 1508, 1727
TatI	WGTACW	2 cut(s)	793, 1529
TauI	GCSGC	4 cut(s)	62, 100, 292, 348
TfiI	GAWTC	5 cut(s)	607, 1046, 1053, 1094, 1645
Tru1I	TTAA	3 cut(s)	758, 1241, 1257
Tru9I	TTAA	3 cut(s)	758, 1241, 1257
TscAI	CASTG	4 cut(s)	381, 1071, 1116, 1624
TseFI	GTSAC	1 cut(s)	1741
TseI	GCWGC	5 cut(s)	12, 15, 1178, 1292, 1520
Tsp45I	GTSAC	1 cut(s)	1741
TspDTI	ATGAA	5 cut(s)	1227, 1442, 1451, 1566, 1658
TspRI	CASTG	4 cut(s)	381, 1071, 1116, 1624
VpaK11BI	GGWCC	2 cut(s)	1156, 1272
XapI	RAATTY	4 cut(s)	753, 817, 1508, 1727
XmiI	GTMKAC	2 cut(s)	651, 1024
XmnI	GAANNNNTTC	2 cut(s)	561, 1705
XspI	CTAG	3 cut(s)	888, 1541, 1764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.