Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001412

Physical Location & Seq

Genomic Coordinates Reverse (-)

53435018 .. 53438222

Gene Structure 3205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0435000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGCAGATTCTGAAAATCCAACAAATCAAAACAAGTGGAGGCACAGTATCAGATAGCAGCAGCTGCTCACCAGGAACAAAGACTCCAAGTCTAGTAGCAAGATTAATGGGTCTTGACCTTCTTCCTGAATCTCACTCACCCTCTTCTACTTCATCATTAACACCAAATCCTCGTTCCATTTCAAAGCCACATTTGAATCTACACCCTCTTCGGCCTTCTCGCCAACCCCTCCAATACACCAAAGACTTCAAAGCAGCAGGTACTCGCTCGTTACCGGAGACTCCTAGAATATCATCTGCCAGAAGATCGGACGTTGATCACCACCACCGCCTTTCGCTTCAGATCAACAAAGAGAACATAGCCGTTGGCGAGGAGTTGGAGTTTTCGAGGCTGTCGTCTTTTAAAAGGAAGGAGCTGCTCAAGAGTATTATTGGAGACCATGAGAGTGGTCGGAGCCCGAGTCACTATGCTAGGCAAATCGTCAAACAGGTCAAGGAGACTGTGAGCAGGAAAATGGGATTGGTCGACGTCACAAACACCACAAGAAATGATCGAGACCTCCTCAATCACCAGCTCAAATTGAAAAAAGCTACGCAAGACGCAAATCCCGGAAAACCATCAACACCTTCTTCTTGCTCCCCAAGGCTCAGATTGTCGGAGGCCAAGACCATCAAACCACGCACCACCAATACTATAGCAACAACAACATCAACAACTTGCAAGGACCAAATTCAAGTTCTACCTCCAAAACCAAACAATGTCAAGGTTCAAGCCAAGCCAAAGCCTCAACCACTGCAAGAACAGAAGCCGCCTCAGGCCATATCAATTCAGAAGCGCCGAAGAATTGCTGACGATGGGTTTAGTCCAGCGAAATTGAAGAAGCAAGAAGAAGCCTTCGTTCGTCCATCAACGGCTCCCACAAGAGCTCAGCAGCAATGCAAGAAGACCCAACTCATCTCGACCAATCTTCTCAATCTCAACAATGTGCCTACTCTTCTTCCGATCAAGAAAGACCCTTCACCGCCGGCGACTAAACTCCCACAAAAACAGTTATCTAGTTCCACGAGCCAGCAGCTGCAGAGTCAGTACAAACAAGATCAAGCCTCCTCCTCGAGCCTTGTGCTCGCTGCCCGAGGCAAAAACGACGACGTAGTACCAAACGGTCTCGCCGCCGCCAGAACCACCGGTGGCGCTGGTGTTGTTGTTGGAATATCAGCAGATGTGCGCCAGTACGTCACGAGAATATTATGCCGTACTGGCATAGATAAAGACACACAAGTTTCGTTCACCAACTGGTTCTCTCCGTCCCACCCACTTGACCCCTCCATTTTTTACCACCTCGAAAACTCTTTCACCGCTTTTACCACAACTCACCCTAGCCAACTCGGCCTTAGGTGCAACCGGAAGCTAGTGTTTCATGTGGTGGACGATGTTCTTGTCGAAATTTTGAGACCCTATCTCAACCTCAAGCCATGGGTTAGCTCAACTAGTGTTACAAAATTTGGTTACAAGGGATCGAAGTTGATCGACATTGTGTGCTACAAAATCCAGAGCTTTCCGGGCGCCGATTGCCGTGTTCTAGAGGACATCGACGCGTTGATCGACGAGGACTTGCCGGAGTCGAAGGTGCAAAGTGTAATGGCTTTGTCTTTTGAAGAAGAAGGAGAGGGGGTGGTGAGGGAGATAGAGGAGGACATATTGGACACTCTAGTGCACGAAGCGGCTATGTGCCTATGGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

580

Amino Acids

64.17

Weight (kDa)

9.55

Isoelectric Point (pI)

52.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	18 - 46	1.5e-11	DUF761-associated sequence motif
DUF4378	PF14309	410 - 573	3.2e-31	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49370 AT5G24430
fragaria_vesca	FvH4_7g32610 FvH4_7g32610
malus_domestica	MD01G1227200.v1.1 MD07G1297500.v1.1
prunus_persica	Prupe.2G317200_v2.0.a1 Prupe.2G317200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0382501 RchiOBHm_Chr2g0138551 RchiOBHm_Chr2g0138561 RchiOBHm_Chr2g0161821 RchiOBHm_Chr6g0303421
rosa_laevigata	RLG00000007574 RLG00000010752 RLG00000023924 RLG00000026171 RLG00000031079 RLG00000034979 RLG00000035703 RLG00000036307
rosa_multiflora	Rmu_sc0000110.1_g000053 Rmu_sc0000110.1_g000055 Rmu_sc0003696.1_g000002 Rmu_sc0029402.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111900 Rroxscaffold_4G00278000 Rroxscaffold_7G00202700
rosa_rugosa	Rorug01G0435000
rosa_samantha	Rh1AG262900 Rh1AG460000 Rh1BG182300 Rh1BG416200 Rh1CG430000 Rh1DG212400 Rh1DG448600 Rh2AG553600 Rh2BG637900 Rh4AG140900 Rh4CG147700 Rh4CG147800 Rh5CG368300 Rh5CG374200 Rh6AG435500 Rh6CG169600 Rh6CG190900 Rh6DG161600 Rh7BG358800 Rh7CG197800 Rh7CG451800
rosa_wichuraiana	Rw1G001490 Rw1G041160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	531
Acc36I	ACCTGC	1 cut(s)	248
AccB1I	GGYRCC	1 cut(s)	1562
AccI	GTMKAC	1 cut(s)	525
AccII	CGCG	1 cut(s)	1595
AciI	CCGC	7 cut(s)	328, 809, 1022, 1170, 1173, 1356, 1721
AclWI	GGATC	1 cut(s)	1522
AcsI	RAATTY	3 cut(s)	729, 1443, 1499
AcuI	CTGAAG	1 cut(s)	323
AcyI	GRCGYC	2 cut(s)	528, 1563
AfaI	GTAC	5 cut(s)	262, 1088, 1155, 1232, 1255
AflIII	ACRYGT	1 cut(s)	1593
AgeI	ACCGGT	1 cut(s)	1184
AgsI	TTSAA	8 cut(s)	183, 196, 250, 583, 734, 770, 877, 1655
AhdI	GACNNNNNGTC	1 cut(s)	87
AhlI	ACTAGT	1 cut(s)	1487
AjnI	CCWGG	1 cut(s)	70
AjuI	GAANNNNNNNTTGG	6 cut(s)	157, 189, 503, 535, 720, 752
AleI	CACNNNNGTG	1 cut(s)	1709
AloI	GAACNNNNNNTCC	2 cut(s)	67, 99
AluBI	AGCT	9 cut(s)	63, 415, 574, 590, 926, 1075, 1408, 1482, 1554
AluI	AGCT	9 cut(s)	63, 415, 574, 590, 926, 1075, 1408, 1482, 1554
Alw21I	GWGCWC	3 cut(s)	928, 1125, 1716
Alw26I	GTCTC	6 cut(s)	272, 429, 491, 549, 1169, 1444
Alw44I	GTGCAC	1 cut(s)	1712
AlwI	GGATC	1 cut(s)	1522
AlwNI	CAGNNNCTG	3 cut(s)	10, 63, 1075
Ama87I	CYCGRG	3 cut(s)	457, 1111, 1131
AoxI	GGCC	4 cut(s)	212, 660, 816, 1387
ApaLI	GTGCAC	1 cut(s)	1712
ApeKI	GCWGC	9 cut(s)	57, 60, 63, 254, 415, 931, 1072, 1075, 1127
ApoI	RAATTY	3 cut(s)	729, 1443, 1499
AseI	ATTAAT	1 cut(s)	104
AsiGI	ACCGGT	1 cut(s)	1184
AspLEI	GCGC	4 cut(s)	837, 1193, 1227, 1565
AspS9I	GGNCC	1 cut(s)	724
AsuC2I	CCSGG	2 cut(s)	609, 1560
AsuHPI	GGTGA	9 cut(s)	60, 129, 311, 560, 1011, 1279, 1345, 1364, 1687
AvaI	CYCGRG	3 cut(s)	457, 1111, 1131
AvaII	GGWCC	1 cut(s)	724
AxyI	CCTNAGG	2 cut(s)	813, 1391
BaeGI	GKGCMC	1 cut(s)	1716
BanI	GGYRCC	1 cut(s)	1562
BanII	GRGCYC	2 cut(s)	458, 928
BauI	CACGAG	2 cut(s)	1063, 1237
BbsI	GAAGAC	1 cut(s)	950
Bbv12I	GWGCWC	3 cut(s)	928, 1125, 1716
BbvI	GCAGC	9 cut(s)	50, 69, 72, 266, 402, 943, 1062, 1084, 1114
BccI	CCATC	4 cut(s)	625, 677, 848, 913
BceAI	ACGGC	4 cut(s)	347, 927, 1236, 1557
BcgI	CGANNNNNNTGC	2 cut(s)	1102, 1136
BciT130I	CCWGG	1 cut(s)	72
BclI	TGATCA	1 cut(s)	316
BcnI	CCSGG	2 cut(s)	609, 1560
BcoDI	GTCTC	6 cut(s)	272, 429, 491, 549, 1169, 1444
BcuI	ACTAGT	1 cut(s)	1487
BfaI	CTAG	9 cut(s)	92, 285, 471, 1056, 1377, 1409, 1488, 1580, 1709
BfmI	CTRYAG	2 cut(s)	693, 1076
BfoI	RGCGCY	3 cut(s)	838, 1194, 1566
BfuAI	ACCTGC	1 cut(s)	248
BglI	GCCNNNNNGGC	2 cut(s)	1257, 1386
BlpI	GCTNAGC	1 cut(s)	927
Bme1390I	CCNGG	3 cut(s)	72, 609, 1560
Bme18I	GGWCC	1 cut(s)	724
BmeRI	GACNNNNNGTC	1 cut(s)	87
BmeT110I	CYCGRG	3 cut(s)	457, 1111, 1131
BmgT120I	GGNCC	1 cut(s)	724
BmiI	GGNNCC	3 cut(s)	455, 915, 1564
BmrFI	CCNGG	3 cut(s)	72, 609, 1560
BpiI	GAAGAC	1 cut(s)	950
BplI	GAGNNNNNCTC	2 cut(s)	546, 578
Bpu1102I	GCTNAGC	1 cut(s)	927
BpuEI	CTTGAG	2 cut(s)	404, 1451
BpuMI	CCSGG	2 cut(s)	609, 1560
BsaHI	GRCGYC	2 cut(s)	528, 1563
BsaI	GGTCTC	4 cut(s)	429, 549, 1169, 1444
BsaJI	CCNNGG	3 cut(s)	641, 1132, 1472
BsaWI	WCCGGW	3 cut(s)	274, 1184, 1401
Bse118I	RCCGGY	2 cut(s)	1024, 1184
Bse1I	ACTGG	3 cut(s)	1228, 1261, 1298
Bse21I	CCTNAGG	2 cut(s)	813, 1391
Bse3DI	GCAATG	1 cut(s)	941
BseBI	CCWGG	1 cut(s)	72
BseDI	CCNNGG	3 cut(s)	641, 1132, 1472
BseMI	GCAATG	1 cut(s)	941
BseMII	CTCAG	3 cut(s)	661, 827, 941
BseNI	ACTGG	3 cut(s)	1228, 1261, 1298
BseRI	GAGGAG	5 cut(s)	386, 551, 1096, 1099, 1703
BseSI	GKGCMC	1 cut(s)	1716
BseXI	GCAGC	9 cut(s)	50, 69, 72, 266, 402, 943, 1062, 1084, 1114
Bsh1236I	CGCG	1 cut(s)	1595
BshFI	GGCC	4 cut(s)	214, 662, 818, 1389
BshNI	GGYRCC	1 cut(s)	1562
BshTI	ACCGGT	1 cut(s)	1184
BsiHKAI	GWGCWC	3 cut(s)	928, 1125, 1716
BsiHKCI	CYCGRG	3 cut(s)	457, 1111, 1131
BsiSI	CCGG	7 cut(s)	275, 609, 1025, 1185, 1402, 1559, 1616
BslFI	GGGAC	1 cut(s)	1291
BsmAI	GTCTC	6 cut(s)	272, 429, 491, 549, 1169, 1444
BsmFI	GGGAC	1 cut(s)	1291
BsnI	GGCC	4 cut(s)	214, 662, 818, 1389
Bso31I	GGTCTC	4 cut(s)	429, 549, 1169, 1444
BsoBI	CYCGRG	3 cut(s)	457, 1111, 1131
Bsp1286I	GDGCHC	4 cut(s)	458, 928, 1125, 1716
Bsp143I	GATC	9 cut(s)	305, 316, 342, 550, 1002, 1096, 1514, 1524, 1599
Bsp1720I	GCTNAGC	1 cut(s)	927
Bsp19I	CCATGG	1 cut(s)	1472
BspACI	CCGC	7 cut(s)	328, 809, 1022, 1170, 1173, 1356, 1721
BspANI	GGCC	4 cut(s)	214, 662, 818, 1389
BspCNI	CTCAG	3 cut(s)	660, 826, 940
BspFNI	CGCG	1 cut(s)	1595
BspLI	GGNNCC	3 cut(s)	455, 915, 1564
BspMAI	CTGCAG	1 cut(s)	1080
BspMI	ACCTGC	1 cut(s)	248
BspPI	GGATC	1 cut(s)	1522
BspT107I	GGYRCC	1 cut(s)	1562
BspTNI	GGTCTC	4 cut(s)	429, 549, 1169, 1444
BsrDI	GCAATG	1 cut(s)	941
BsrFI	RCCGGY	2 cut(s)	1024, 1184
BsrI	ACTGG	3 cut(s)	1228, 1261, 1298
BssAI	RCCGGY	2 cut(s)	1024, 1184
BssECI	CCNNGG	3 cut(s)	641, 1132, 1472
BssMI	GATC	9 cut(s)	305, 316, 342, 550, 1002, 1096, 1514, 1524, 1599
BssNI	GRCGYC	2 cut(s)	528, 1563
BssSI	CACGAG	2 cut(s)	1063, 1237
BssT1I	CCWWGG	2 cut(s)	641, 1472
Bst2BI	CACGAG	2 cut(s)	1063, 1237
Bst2UI	CCWGG	1 cut(s)	72
Bst4CI	ACNGT	4 cut(s)	46, 502, 1050, 1163
Bst6I	CTCTTC	3 cut(s)	148, 213, 999
BstACI	GRCGYC	2 cut(s)	528, 1563
BstAPI	GCANNNNNTGC	1 cut(s)	63
BstC8I	GCNNGC	3 cut(s)	1026, 1070, 1125
BstDEI	CTNAG	4 cut(s)	647, 813, 927, 1391
BstDSI	CCRYGG	1 cut(s)	1472
BstFNI	CGCG	1 cut(s)	1595
BstH2I	RGCGCY	3 cut(s)	838, 1194, 1566
BstHHI	GCGC	4 cut(s)	837, 1193, 1227, 1565
BstKTI	GATC	9 cut(s)	308, 319, 345, 553, 1005, 1099, 1517, 1527, 1602
BstMAI	GTCTC	6 cut(s)	272, 429, 491, 549, 1169, 1444
BstMBI	GATC	9 cut(s)	305, 316, 342, 550, 1002, 1096, 1514, 1524, 1599
BstMWI	GCNNNNNNNGC	6 cut(s)	63, 1257, 1386, 1395, 1560, 1569
BstNI	CCWGG	1 cut(s)	72
BstSCI	CCNGG	3 cut(s)	70, 607, 1558
BstSFI	CTRYAG	2 cut(s)	693, 1076
BstSLI	GKGCMC	1 cut(s)	1716
BstUI	CGCG	1 cut(s)	1595
BstV1I	GCAGC	9 cut(s)	50, 69, 72, 266, 402, 943, 1062, 1084, 1114
BstV2I	GAAGAC	1 cut(s)	950
BstXI	CCANNNNNNTGG	1 cut(s)	446
Bsu36I	CCTNAGG	2 cut(s)	813, 1391
BsuRI	GGCC	4 cut(s)	214, 662, 818, 1389
BtgI	CCRYGG	1 cut(s)	1472
BtsI	GCAGTG	1 cut(s)	791
BtsIMutI	CAGTG	1 cut(s)	791
BveI	ACCTGC	1 cut(s)	248
Cac8I	GCNNGC	3 cut(s)	1026, 1070, 1125
CaiI	CAGNNNCTG	3 cut(s)	10, 63, 1075
CfoI	GCGC	4 cut(s)	837, 1193, 1227, 1565
Cfr10I	RCCGGY	2 cut(s)	1024, 1184
Cfr13I	GGNCC	1 cut(s)	724
CseI	GACGC	2 cut(s)	608, 1601
Csp6I	GTAC	5 cut(s)	261, 1087, 1154, 1231, 1254
CspAI	ACCGGT	1 cut(s)	1184
CspCI	CAANNNNNGTGG	2 cut(s)	16, 51
CviAII	CATG	3 cut(s)	440, 1418, 1473
CviQI	GTAC	5 cut(s)	261, 1087, 1154, 1231, 1254
DdeI	CTNAG	4 cut(s)	647, 813, 927, 1391
DinI	GGCGCC	1 cut(s)	1564
DpnI	GATC	9 cut(s)	307, 318, 344, 552, 1004, 1098, 1516, 1526, 1601
DpnII	GATC	9 cut(s)	305, 316, 342, 550, 1002, 1096, 1514, 1524, 1599
DraI	TTTAAA	1 cut(s)	403
DriI	GACNNNNNGTC	1 cut(s)	87
Eam1104I	CTCTTC	3 cut(s)	148, 213, 999
Eam1105I	GACNNNNNGTC	1 cut(s)	87
EarI	CTCTTC	3 cut(s)	148, 213, 999
Ecl136II	GAGCTC	1 cut(s)	926
Eco130I	CCWWGG	2 cut(s)	641, 1472
Eco24I	GRGCYC	2 cut(s)	458, 928
Eco31I	GGTCTC	4 cut(s)	429, 549, 1169, 1444
Eco47I	GGWCC	1 cut(s)	724
Eco53kI	GAGCTC	1 cut(s)	926
Eco57I	CTGAAG	1 cut(s)	323
Eco81I	CCTNAGG	2 cut(s)	813, 1391
Eco88I	CYCGRG	3 cut(s)	457, 1111, 1131
EcoICRI	GAGCTC	1 cut(s)	926
EcoRII	CCWGG	1 cut(s)	70
EcoT14I	CCWWGG	2 cut(s)	641, 1472
EcoT38I	GRGCYC	2 cut(s)	458, 928
EgeI	GGCGCC	1 cut(s)	1564
EheI	GGCGCC	1 cut(s)	1564
ErhI	CCWWGG	2 cut(s)	641, 1472
FaeI	CATG	3 cut(s)	443, 1421, 1476
FaqI	GGGAC	1 cut(s)	1291
FatI	CATG	3 cut(s)	439, 1417, 1472
FbaI	TGATCA	1 cut(s)	316
FblI	GTMKAC	1 cut(s)	525
FriOI	GRGCYC	2 cut(s)	458, 928
FspBI	CTAG	9 cut(s)	92, 285, 471, 1056, 1377, 1409, 1488, 1580, 1709
GlaI	GCGC	4 cut(s)	836, 1192, 1226, 1564
HaeII	RGCGCY	3 cut(s)	838, 1194, 1566
HaeIII	GGCC	4 cut(s)	214, 662, 818, 1389
HapII	CCGG	7 cut(s)	275, 609, 1025, 1185, 1402, 1559, 1616
HgaI	GACGC	2 cut(s)	608, 1601
HhaI	GCGC	4 cut(s)	837, 1193, 1227, 1565
Hin1I	GRCGYC	2 cut(s)	528, 1563
Hin1II	CATG	3 cut(s)	443, 1421, 1476
Hin6I	GCGC	4 cut(s)	835, 1191, 1225, 1563
HinP1I	GCGC	4 cut(s)	835, 1191, 1225, 1563
HincII	GTYRAC	1 cut(s)	526
HindII	GTYRAC	1 cut(s)	526
HinfI	GANTC	8 cut(s)	7, 82, 128, 196, 280, 460, 1081, 1619
HpaII	CCGG	7 cut(s)	275, 609, 1025, 1185, 1402, 1559, 1616
HphI	GGTGA	9 cut(s)	60, 129, 311, 560, 1011, 1279, 1345, 1364, 1687
Hpy166II	GTNNAC	4 cut(s)	526, 1287, 1426, 1714
Hpy188I	TCNGA	9 cut(s)	12, 52, 310, 342, 453, 650, 658, 831, 1002
Hpy188III	TCNNGA	9 cut(s)	113, 125, 421, 554, 958, 1006, 1237, 1549, 1580
Hpy8I	GTNNAC	4 cut(s)	526, 1287, 1426, 1714
Hpy99I	CGWCG	5 cut(s)	530, 1148, 1151, 1595, 1607
HpyAV	CCTTC	8 cut(s)	128, 225, 403, 636, 904, 1026, 1618, 1655
HpyCH4III	ACNGT	4 cut(s)	46, 502, 1050, 1163
HpyCH4IV	ACGT	4 cut(s)	312, 528, 1149, 1233
HpyCH4V	TGCA	8 cut(s)	4, 720, 796, 939, 1078, 1398, 1630, 1714
HpyF10VI	GCNNNNNNNGC	6 cut(s)	63, 1257, 1386, 1395, 1560, 1569
HpyF3I	CTNAG	4 cut(s)	647, 813, 927, 1391
HpySE526I	ACGT	4 cut(s)	312, 528, 1149, 1233
Hsp92I	GRCGYC	2 cut(s)	528, 1563
Hsp92II	CATG	3 cut(s)	443, 1421, 1476
HspAI	GCGC	4 cut(s)	835, 1191, 1225, 1563
KasI	GGCGCC	1 cut(s)	1562
KroI	GCCGGC	1 cut(s)	1024
KroNI	GCCGGC	1 cut(s)	1026
Ksp22I	TGATCA	1 cut(s)	316
Kzo9I	GATC	9 cut(s)	305, 316, 342, 550, 1002, 1096, 1514, 1524, 1599
LmnI	GCTCC	4 cut(s)	412, 453, 641, 919
Lsp1109I	GCAGC	9 cut(s)	50, 69, 72, 266, 402, 943, 1062, 1084, 1114
MaeI	CTAG	9 cut(s)	92, 285, 471, 1056, 1377, 1409, 1488, 1580, 1709
MaeII	ACGT	4 cut(s)	312, 528, 1149, 1233
MaeIII	GTNAC	6 cut(s)	270, 461, 529, 1234, 1492, 1505
MalI	GATC	9 cut(s)	307, 318, 344, 552, 1004, 1098, 1516, 1526, 1601
MboI	GATC	9 cut(s)	305, 316, 342, 550, 1002, 1096, 1514, 1524, 1599
MhlI	GDGCHC	4 cut(s)	458, 928, 1125, 1716
MluCI	AATT	7 cut(s)	578, 729, 825, 843, 872, 1443, 1499
MluI	ACGCGT	1 cut(s)	1593
Mly113I	GGCGCC	1 cut(s)	1563
MlyI	GAGTC	5 cut(s)	76, 274, 469, 1090, 1628
MmeI	TCCRAC	5 cut(s)	43, 357, 431, 636, 1186
MreI	CGCCGGCG	1 cut(s)	1024
MroNI	GCCGGC	1 cut(s)	1024
MseI	TTAA	3 cut(s)	104, 158, 402
MslI	CAYNNNNRTG	2 cut(s)	444, 1709
MspA1I	CMGCKG	2 cut(s)	63, 1075
MspI	CCGG	7 cut(s)	275, 609, 1025, 1185, 1402, 1559, 1616
MspR9I	CCNGG	3 cut(s)	72, 609, 1560
MvaI	CCWGG	1 cut(s)	72
MvnI	CGCG	1 cut(s)	1595
MwoI	GCNNNNNNNGC	6 cut(s)	63, 1257, 1386, 1395, 1560, 1569
NaeI	GCCGGC	1 cut(s)	1026
NarI	GGCGCC	1 cut(s)	1563
NciI	CCSGG	2 cut(s)	609, 1560
NcoI	CCATGG	1 cut(s)	1472
NdeII	GATC	9 cut(s)	305, 316, 342, 550, 1002, 1096, 1514, 1524, 1599
NgoMIV	GCCGGC	1 cut(s)	1024
NlaIII	CATG	3 cut(s)	443, 1421, 1476
NlaIV	GGNNCC	3 cut(s)	455, 915, 1564
NmeAIII	GCCGAG	1 cut(s)	1365
NmuCI	GTSAC	3 cut(s)	461, 529, 1234
OliI	CACNNNNGTG	1 cut(s)	1709
PaeR7I	CTCGAG	1 cut(s)	1111
PcsI	WCGNNNNNNNCGW	2 cut(s)	392, 1599
PdiI	GCCGGC	1 cut(s)	1026
PfeI	GAWTC	3 cut(s)	7, 128, 196
PfoI	TCCNGGA	1 cut(s)	607
PinAI	ACCGGT	1 cut(s)	1184
PleI	GAGTC	5 cut(s)	76, 274, 468, 1089, 1627
PluTI	GGCGCC	1 cut(s)	1566
PpsI	GAGTC	5 cut(s)	76, 274, 468, 1089, 1627
PshBI	ATTAAT	1 cut(s)	104
Psp124BI	GAGCTC	1 cut(s)	928
Psp6I	CCWGG	1 cut(s)	70
PspGI	CCWGG	1 cut(s)	70
PspN4I	GGNNCC	3 cut(s)	455, 915, 1564
PspPI	GGNCC	1 cut(s)	724
PspXI	VCTCGAGB	1 cut(s)	1111
PstI	CTGCAG	1 cut(s)	1080
PstNI	CAGNNNCTG	3 cut(s)	10, 63, 1075
PvuII	CAGCTG	2 cut(s)	63, 1075
RsaI	GTAC	5 cut(s)	262, 1088, 1155, 1232, 1255
RsaNI	GTAC	5 cut(s)	261, 1087, 1154, 1231, 1254
RseI	CAYNNNNRTG	2 cut(s)	444, 1709
SacI	GAGCTC	1 cut(s)	928
SalI	GTCGAC	1 cut(s)	524
SaqAI	TTAA	3 cut(s)	104, 158, 402
Sau3AI	GATC	9 cut(s)	305, 316, 342, 550, 1002, 1096, 1514, 1524, 1599
Sau96I	GGNCC	1 cut(s)	724
SchI	GAGTC	5 cut(s)	76, 274, 469, 1090, 1628
ScrFI	CCNGG	3 cut(s)	72, 609, 1560
SduI	GDGCHC	4 cut(s)	458, 928, 1125, 1716
SfcI	CTRYAG	2 cut(s)	693, 1076
SfoI	GGCGCC	1 cut(s)	1564
Sfr274I	CTCGAG	1 cut(s)	1111
SgrAI	CRCCGGYG	2 cut(s)	1024, 1184
SinI	GGWCC	1 cut(s)	724
SlaI	CTCGAG	1 cut(s)	1111
SmiMI	CAYNNNNRTG	2 cut(s)	444, 1709
SmlI	CTYRAG	3 cut(s)	419, 1111, 1466
SmoI	CTYRAG	3 cut(s)	419, 1111, 1466
SpeI	ACTAGT	1 cut(s)	1487
Sse9I	AATT	7 cut(s)	578, 729, 825, 843, 872, 1443, 1499
SsiI	CCGC	7 cut(s)	328, 809, 1022, 1170, 1173, 1356, 1721
SspDI	GGCGCC	1 cut(s)	1562
SspI	AATATT	1 cut(s)	1245
SspMI	CTAG	9 cut(s)	92, 285, 471, 1056, 1377, 1409, 1488, 1580, 1709
SstI	GAGCTC	1 cut(s)	928
StyD4I	CCNGG	3 cut(s)	70, 607, 1558
StyI	CCWWGG	2 cut(s)	641, 1472
TaaI	ACNGT	4 cut(s)	46, 502, 1050, 1163
TaiI	ACGT	4 cut(s)	315, 531, 1152, 1236
TasI	AATT	7 cut(s)	578, 729, 825, 843, 872, 1443, 1499
TatI	WGTACW	1 cut(s)	1086
TauI	GCSGC	4 cut(s)	811, 1172, 1175, 1724
TfiI	GAWTC	3 cut(s)	7, 128, 196
Tru1I	TTAA	3 cut(s)	104, 158, 402
Tru9I	TTAA	3 cut(s)	104, 158, 402
TscAI	CASTG	1 cut(s)	798
TseFI	GTSAC	3 cut(s)	461, 529, 1234
TseI	GCWGC	9 cut(s)	57, 60, 63, 254, 415, 931, 1072, 1075, 1127
Tsp45I	GTSAC	3 cut(s)	461, 529, 1234
TspDTI	ATGAA	2 cut(s)	141, 1406
TspGWI	ACGGA	1 cut(s)	1293
TspRI	CASTG	1 cut(s)	798
VneI	GTGCAC	1 cut(s)	1712
VpaK11BI	GGWCC	1 cut(s)	724
VspI	ATTAAT	1 cut(s)	104
XapI	RAATTY	3 cut(s)	729, 1443, 1499
XbaI	TCTAGA	1 cut(s)	1579
XhoI	CTCGAG	1 cut(s)	1111
XmiI	GTMKAC	1 cut(s)	525
XspI	CTAG	9 cut(s)	92, 285, 471, 1056, 1377, 1409, 1488, 1580, 1709
ZraI	GACGTC	1 cut(s)	529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.