Rh7BG358800

Basic leucine zipper and W2 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001412
Physical Location & Seq
Reverse (-)
37747791 .. 37750006
2216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG358800.1

Sequence Viewer

Length: 903 bp
ATGACGACCACGATCTCCTTCAGCGAGCTCCCCGACCTCGTCCTCCCCGACCTCGTCCTTCAACGATCCGAGCCACCTTCAGCTCCTTCACAGACCCAGAACTGCCTCGATCGACGACGACCACGATCTCCTTCTTCGAGCTCCTCCGACCTCTTTGTACGACCTGAGCTCGTTCTCCGACCCGACCTCGTCCTTCAACGATCCGAGCCACCTTCAGCTCCTTCATCGACCCAGAACAGCCTCGATCGACCACGACCACGAACTCCTTCAGCGAGCTCATTCAATGACCTGACCACGAACTCATTCTCCCACCTGAGCTCCTCATTGTCCGACTTGAGCCGGCTTGAGGTAGTTCTCCGATCGCCACCATCGAACTGTGTTGTTTGGTGGTGTTGCTCCGCGTCATACTGTAATTGTATTCACTCGGCTCTTTCCAAGGCTATGACTGAAGATGAGCTCTACTATCTTAGGGCTCAGTTTACGCTCTTGGAACCCAAACATGGATACGTGTCCCTCGATAATTTCAGAACGGTTGTTTTCACTGGGGGCAGTACACAACCAGGAACAACAAAACCTGATAAGGGGGAGCGCCACCCTTACTCTGTACTAGAGTCTGAGCGTAGACGTGAAGTCAGTATACCATCTGTTATCTACATGCAAAAGATTTTGAGGCGAAGGCCATTTCTGATAAAGAATCTCGAAAATGTCTTCCTTCAGTCATTGGAGCTTTTTGTGGAAAATGAAAGGAAGAAGCTGGCAATTTGCACAGCACTTGCATTCTCTCAAAAGCTATCAGGACTTACACTGGAAACGGTGTTCCAGCCAATGCTCATATTGAATCAACACAGCACTTGCATTCTCTTGGTTTTTCTTTTTGTGTGTTTTGTTCTCATTGCTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
W2

Protein Analysis

300

Amino Acids

33.86

Weight (kDa)

8.58

Isoelectric Point (pI)

64.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_5MP1_2 PF25504 173 - 288 2e-19 5MP1/2 HEAT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 622, 637
AccII CGCG 1 cut(s) 401
AciI CCGC 1 cut(s) 399
AclWI GGATC 2 cut(s) 60, 195
AcuI CTGAAG 6 cut(s) 4, 63, 198, 252, 468, 698
AfaI GTAC 3 cut(s) 159, 553, 606
AfiI CCNNNNNNNGG 3 cut(s) 346, 500, 581
AflIII ACRYGT 1 cut(s) 507
AgsI TTSAA 4 cut(s) 62, 197, 283, 838
AhdI GACNNNNNGTC 1 cut(s) 629
AjiI CACGTC 1 cut(s) 626
AjnI CCWGG 1 cut(s) 559
AloI GAACNNNNNNTCC 4 cut(s) 290, 322, 800, 832
Alw21I GWGCWC 6 cut(s) 30, 143, 171, 278, 320, 459
AlwI GGATC 2 cut(s) 60, 195
AoxI GGCC 1 cut(s) 677
Asp700I GAANNNNTTC 2 cut(s) 265, 302
AspLEI GCGC 1 cut(s) 591
BanII GRGCYC 7 cut(s) 30, 143, 171, 278, 320, 459, 475
BarI GAAGNNNNNNTAC 2 cut(s) 621, 653
BbsI GAAGAC 1 cut(s) 700
Bbv12I GWGCWC 6 cut(s) 30, 143, 171, 278, 320, 459
BccI CCATC 2 cut(s) 376, 649
BciT130I CCWGG 1 cut(s) 561
BciVI GTATCC 1 cut(s) 497
BfaI CTAG 1 cut(s) 608
BfoI RGCGCY 1 cut(s) 592
BfuI GTATCC 1 cut(s) 497
Bme1390I CCNGG 1 cut(s) 561
BmeRI GACNNNNNGTC 1 cut(s) 629
BmgBI CACGTC 1 cut(s) 626
BmiI GGNNCC 1 cut(s) 492
BmrFI CCNGG 1 cut(s) 561
BmrI ACTGGG 1 cut(s) 552
BmuI ACTGGG 1 cut(s) 552
BpiI GAAGAC 1 cut(s) 700
Bpu10I CCTNAGC 2 cut(s) 165, 314
BpuEI CTTGAG 2 cut(s) 355, 365
BsaAI YACGTR 1 cut(s) 508
BsaJI CCNNGG 1 cut(s) 435
BsaXI ACNNNNNCTCC 4 cut(s) 290, 302, 320, 332
Bsc4I CCNNNNNNNGG 3 cut(s) 346, 500, 581
Bse118I RCCGGY 1 cut(s) 339
Bse1I ACTGG 2 cut(s) 547, 810
Bse3DI GCAATG 1 cut(s) 891
BseBI CCWGG 1 cut(s) 561
BseDI CCNNGG 1 cut(s) 435
BseLI CCNNNNNNNGG 3 cut(s) 346, 500, 581
BseMI GCAATG 1 cut(s) 891
BseMII CTCAG 4 cut(s) 156, 305, 488, 606
BseNI ACTGG 2 cut(s) 547, 810
BseRI GAGGAG 2 cut(s) 133, 310
Bsh1236I CGCG 1 cut(s) 401
Bsh1285I CGRYCG 3 cut(s) 112, 247, 362
BshFI GGCC 1 cut(s) 679
BsiEI CGRYCG 3 cut(s) 112, 247, 362
BsiHKAI GWGCWC 6 cut(s) 30, 143, 171, 278, 320, 459
BsiSI CCGG 1 cut(s) 340
BslFI GGGAC 1 cut(s) 496
BslI CCNNNNNNNGG 3 cut(s) 346, 500, 581
BsmFI GGGAC 1 cut(s) 496
BsmI GAATGC 2 cut(s) 776, 855
BsnI GGCC 1 cut(s) 679
Bsp1286I GDGCHC 7 cut(s) 30, 143, 171, 278, 320, 459, 475
Bsp143I GATC 7 cut(s) 12, 65, 109, 125, 200, 244, 359
BspACI CCGC 1 cut(s) 399
BspANI GGCC 1 cut(s) 679
BspCNI CTCAG 4 cut(s) 157, 306, 487, 607
BspFNI CGCG 1 cut(s) 401
BspLI GGNNCC 1 cut(s) 492
BspPI GGATC 2 cut(s) 60, 195
BsrDI GCAATG 1 cut(s) 891
BsrFI RCCGGY 1 cut(s) 339
BsrI ACTGG 2 cut(s) 547, 810
BssAI RCCGGY 1 cut(s) 339
BssECI CCNNGG 1 cut(s) 435
BssMI GATC 7 cut(s) 12, 65, 109, 125, 200, 244, 359
BssNAI GTATAC 1 cut(s) 638
BssT1I CCWWGG 1 cut(s) 435
Bst1107I GTATAC 1 cut(s) 638
Bst2UI CCWGG 1 cut(s) 561
Bst4CI ACNGT 4 cut(s) 377, 410, 532, 814
BstBAI YACGTR 1 cut(s) 508
BstC8I GCNNGC 4 cut(s) 26, 274, 341, 756
BstDEI CTNAG 5 cut(s) 165, 314, 467, 474, 615
BstFNI CGCG 1 cut(s) 401
BstH2I RGCGCY 1 cut(s) 592
BstHHI GCGC 1 cut(s) 591
BstKTI GATC 7 cut(s) 15, 68, 112, 128, 203, 247, 362
BstMBI GATC 7 cut(s) 12, 65, 109, 125, 200, 244, 359
BstMCI CGRYCG 3 cut(s) 112, 247, 362
BstNI CCWGG 1 cut(s) 561
BstNSI RCATGY 1 cut(s) 658
BstSCI CCNGG 1 cut(s) 559
BstUI CGCG 1 cut(s) 401
BstV2I GAAGAC 1 cut(s) 700
BstZ17I GTATAC 1 cut(s) 638
BsuI GTATCC 1 cut(s) 497
BsuRI GGCC 1 cut(s) 679
BtrI CACGTC 1 cut(s) 626
BtsIMutI CAGTG 2 cut(s) 540, 803
Cac8I GCNNGC 4 cut(s) 26, 274, 341, 756
CfoI GCGC 1 cut(s) 591
Cfr10I RCCGGY 1 cut(s) 339
CseI GACGC 1 cut(s) 390
Csp6I GTAC 3 cut(s) 158, 552, 605
CviAII CATG 2 cut(s) 500, 655
CviQI GTAC 3 cut(s) 158, 552, 605
DdeI CTNAG 5 cut(s) 165, 314, 467, 474, 615
DpnI GATC 7 cut(s) 14, 67, 111, 127, 202, 246, 361
DpnII GATC 7 cut(s) 12, 65, 109, 125, 200, 244, 359
DriI GACNNNNNGTC 1 cut(s) 629
Eam1105I GACNNNNNGTC 1 cut(s) 629
Ecl136II GAGCTC 6 cut(s) 28, 141, 169, 276, 318, 457
Eco130I CCWWGG 1 cut(s) 435
Eco24I GRGCYC 7 cut(s) 30, 143, 171, 278, 320, 459, 475
Eco53kI GAGCTC 6 cut(s) 28, 141, 169, 276, 318, 457
Eco57I CTGAAG 6 cut(s) 4, 63, 198, 252, 468, 698
EcoICRI GAGCTC 6 cut(s) 28, 141, 169, 276, 318, 457
EcoRII CCWGG 1 cut(s) 559
EcoT14I CCWWGG 1 cut(s) 435
EcoT38I GRGCYC 7 cut(s) 30, 143, 171, 278, 320, 459, 475
ErhI CCWWGG 1 cut(s) 435
FaeI CATG 2 cut(s) 503, 658
FaiI YATR 6 cut(s) 406, 443, 501, 638, 656, 833
FaqI GGGAC 1 cut(s) 496
FatI CATG 2 cut(s) 499, 654
FblI GTMKAC 2 cut(s) 622, 637
FriOI GRGCYC 7 cut(s) 30, 143, 171, 278, 320, 459, 475
FspBI CTAG 1 cut(s) 608
GlaI GCGC 1 cut(s) 590
HaeII RGCGCY 1 cut(s) 592
HaeIII GGCC 1 cut(s) 679
HapII CCGG 1 cut(s) 340
HgaI GACGC 1 cut(s) 390
HhaI GCGC 1 cut(s) 591
Hin1II CATG 2 cut(s) 503, 658
Hin6I GCGC 1 cut(s) 589
HinP1I GCGC 1 cut(s) 589
HinfI GANTC 3 cut(s) 611, 694, 838
HpaII CCGG 1 cut(s) 340
Hpy166II GTNNAC 4 cut(s) 480, 554, 623, 638
Hpy188I TCNGA 9 cut(s) 70, 148, 179, 205, 331, 359, 527, 616, 687
Hpy188III TCNNGA 2 cut(s) 698, 795
Hpy8I GTNNAC 4 cut(s) 480, 554, 623, 638
Hpy99I CGWCG 2 cut(s) 117, 120
HpyCH4III ACNGT 4 cut(s) 377, 410, 532, 814
HpyCH4IV ACGT 2 cut(s) 507, 625
HpyCH4V TGCA 4 cut(s) 658, 765, 776, 855
HpyF3I CTNAG 5 cut(s) 165, 314, 467, 474, 615
HpySE526I ACGT 2 cut(s) 507, 625
Hsp92II CATG 2 cut(s) 503, 658
HspAI GCGC 1 cut(s) 589
KroI GCCGGC 1 cut(s) 339
KroNI GCCGGC 1 cut(s) 341
Kzo9I GATC 7 cut(s) 12, 65, 109, 125, 200, 244, 359
LmnI GCTCC 8 cut(s) 33, 88, 146, 223, 323, 401, 586, 724
MaeI CTAG 1 cut(s) 608
MaeII ACGT 2 cut(s) 507, 625
MalI GATC 7 cut(s) 14, 67, 111, 127, 202, 246, 361
MboI GATC 7 cut(s) 12, 65, 109, 125, 200, 244, 359
MboII GAAGA 4 cut(s) 126, 461, 700, 760
MhlI GDGCHC 7 cut(s) 30, 143, 171, 278, 320, 459, 475
MluCI AATT 3 cut(s) 412, 520, 759
MlyI GAGTC 1 cut(s) 620
MmeI TCCRAC 3 cut(s) 171, 202, 354
MroNI GCCGGC 1 cut(s) 339
MroXI GAANNNNTTC 2 cut(s) 265, 302
MspI CCGG 1 cut(s) 340
MspR9I CCNGG 1 cut(s) 561
Mva1269I GAATGC 2 cut(s) 776, 855
MvaI CCWGG 1 cut(s) 561
MvnI CGCG 1 cut(s) 401
NaeI GCCGGC 1 cut(s) 341
NdeII GATC 7 cut(s) 12, 65, 109, 125, 200, 244, 359
NgoMIV GCCGGC 1 cut(s) 339
NlaIII CATG 2 cut(s) 503, 658
NlaIV GGNNCC 1 cut(s) 492
NmeAIII GCCGAG 1 cut(s) 404
NspI RCATGY 1 cut(s) 658
PcsI WCGNNNNNNNCGW 4 cut(s) 45, 121, 368, 513
PctI GAATGC 2 cut(s) 776, 855
PdiI GCCGGC 1 cut(s) 341
PdmI GAANNNNTTC 2 cut(s) 265, 302
PfeI GAWTC 2 cut(s) 694, 838
PflFI GACNNNGTC 3 cut(s) 38, 53, 188
Ple19I CGATCG 3 cut(s) 112, 247, 362
PleI GAGTC 1 cut(s) 619
PpsI GAGTC 1 cut(s) 619
Ppu21I YACGTR 1 cut(s) 508
Psp124BI GAGCTC 6 cut(s) 30, 143, 171, 278, 320, 459
Psp6I CCWGG 1 cut(s) 559
PspGI CCWGG 1 cut(s) 559
PspN4I GGNNCC 1 cut(s) 492
PsyI GACNNNGTC 3 cut(s) 38, 53, 188
PvuI CGATCG 3 cut(s) 112, 247, 362
RsaI GTAC 3 cut(s) 159, 553, 606
RsaNI GTAC 3 cut(s) 158, 552, 605
SacI GAGCTC 6 cut(s) 30, 143, 171, 278, 320, 459
Sau3AI GATC 7 cut(s) 12, 65, 109, 125, 200, 244, 359
SchI GAGTC 1 cut(s) 620
ScrFI CCNGG 1 cut(s) 561
SduI GDGCHC 7 cut(s) 30, 143, 171, 278, 320, 459, 475
SmlI CTYRAG 2 cut(s) 334, 344
SmoI CTYRAG 2 cut(s) 334, 344
Sse9I AATT 3 cut(s) 412, 520, 759
SsiI CCGC 1 cut(s) 399
SspMI CTAG 1 cut(s) 608
SstI GAGCTC 6 cut(s) 30, 143, 171, 278, 320, 459
StyD4I CCNGG 1 cut(s) 559
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 4 cut(s) 377, 410, 532, 814
TaiI ACGT 2 cut(s) 510, 628
TaqI TCGA 9 cut(s) 108, 112, 137, 227, 243, 247, 371, 516, 699
TasI AATT 3 cut(s) 412, 520, 759
TatI WGTACW 2 cut(s) 551, 604
TfiI GAWTC 2 cut(s) 694, 838
TscAI CASTG 2 cut(s) 547, 810
TspDTI ATGAA 2 cut(s) 213, 756
TspRI CASTG 2 cut(s) 547, 810
Tth111I GACNNNGTC 3 cut(s) 38, 53, 188
XceI RCATGY 1 cut(s) 658
XmiI GTMKAC 2 cut(s) 622, 637
XmnI GAANNNNTTC 2 cut(s) 265, 302
XspI CTAG 1 cut(s) 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.