Rh1CG430000

CDPK-related kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
68747314 .. 68751655
4342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG430000.1

Sequence Viewer

Length: 1236 bp
ATGGGGCATTGCTGCAGCAAAAGCGCCGCCGTTTCGGTGGCCAACAACAACCACGACCACCCGACCCCCGCCGCCTCCTCCGCCGTCTCCGTCCAGCAGTCTAAACACCCGCCGGTGCCGCCGAGCCCGGTCGCCGGCGATGTGAAGAACACTCCGTCTCACTCATTTACGGCGAGTCCGTTCCCGAGCCCGCTCCCTGCCGGAGTGGCGCCGTCGCCGGCCAGGACGCCGGGGAGGAAGTTCCGGTGGCCGTTGCCGCCTCCGTCGCCGGCGAAGCCGATCATGGCAGCGTTTCGGCGGCGGAGGGAGGCGAAGCCGAAGGACGGGCCGATACCGGAGGAGAATAATCACCAGGGCGGCGAAGAAGAAGGAGAGAGGGGGCTGGATAAGAGCTTTGGGTATGGGAAGAACTTTGGGGCGAAATTTGAATTGGGGAAGGAGGTGGGGCGAGGGCATTTTGGTCATACTTGCTCGGCTAAGGGAAAGAAGGGAGAGCTTAAGGGTCAGCCTGTGGCTGTCAAGATCATATCCAAAGCAAAGATGACAACAGCAATAGCTATTGAAGATGTCCGTAGAGAGGTGAAAATACTGAAAGCATTATCTGGACATAAGAATCTGTTATTTCGTTTTGATCTATCTGCTGTCTTCACAGCCCACCCATGGCTAAGGGATGAAAGACGAGCTGTGCCTTTAGATTTAGTAATCTACAAGTTGGTTAGGTCATATGTTCGTGCCACACCTTTCAGGCGTGCAGCAATGAAGGCTCTTTCCAAGGCTATAACAGAAGATGAGCTCTACTATCTTAGGGTTCAGTTTACACTCTTGGAACCCAAACATGGATACGTGTCCCTCGATAATTTCAGAACGGCTCTCATGAAAAATTCAACTGATGCCATGAAGGAGTCGAGGGTTCATGACATCATAAATGTGATGGAGCCACTCGCGCACAAGAAATTGGACTTTGAAGAGTTCTGCGTTGCCGCAATAAGTGCATATCAGCTAGAAGCTCTTGAAGGGTGGGAGAAGATTGCAAGTACGGCTTTTGAGTGTTTTGAAAGGGAAGGAAACCGGGTCATCTCTGTTGAGGAGTTGGCACAGGAAATGAATCTGGGTCCTACATCTTACTCTCTACTCAGAGACTGGATCAGAACCTCCGACCGAAAACTTAGCTTCCTTGGATACACCAAATTTTTGCATGGTGTGACAATACGTACTTCCAATACTAGACACCGATGA

Protein Analysis

411

Amino Acids

45.7

Weight (kDa)

9.66

Isoelectric Point (pI)

46.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 115, 208
AccBSI CCGCTC 1 cut(s) 193
AccII CGCG 1 cut(s) 944
AclWI GGATC 1 cut(s) 1151
AcoI YGGCCR 3 cut(s) 39, 219, 248
AcsI RAATTY 3 cut(s) 422, 880, 1187
AcyI GRCGYC 2 cut(s) 209, 227
AfaI GTAC 2 cut(s) 1036, 1213
AfiI CCNNNNNNNGG 5 cut(s) 134, 323, 577, 660, 836
AflII CTTAAG 1 cut(s) 497
AflIII ACRYGT 1 cut(s) 843
AgsI TTSAA 6 cut(s) 428, 563, 885, 965, 1013, 1055
AjnI CCWGG 2 cut(s) 221, 351
AjuI GAANNNNNNNTTGG 2 cut(s) 413, 445
AluBI AGCT 8 cut(s) 393, 496, 557, 683, 793, 1000, 1007, 1170
AluI AGCT 8 cut(s) 393, 496, 557, 683, 793, 1000, 1007, 1170
Alw21I GWGCWC 1 cut(s) 795
Alw26I GTCTC 3 cut(s) 91, 162, 1131
AlwI GGATC 1 cut(s) 1151
AlwNI CAGNNNCTG 1 cut(s) 1140
Ama87I CYCGRG 1 cut(s) 184
AoxI GGCC 4 cut(s) 39, 219, 248, 326
ApeKI GCWGC 4 cut(s) 12, 15, 287, 752
ApoI RAATTY 3 cut(s) 422, 880, 1187
AspLEI GCGC 3 cut(s) 26, 211, 946
AspS9I GGNCC 2 cut(s) 326, 1112
AsuC2I CCSGG 3 cut(s) 128, 231, 1070
AsuHPI GGTGA 2 cut(s) 341, 592
AvaI CYCGRG 1 cut(s) 184
AvaII GGWCC 1 cut(s) 1112
BalI TGGCCA 1 cut(s) 41
BanI GGYRCC 2 cut(s) 115, 208
BanII GRGCYC 3 cut(s) 128, 191, 795
BbsI GAAGAC 1 cut(s) 637
Bbv12I GWGCWC 1 cut(s) 795
BbvI GCAGC 3 cut(s) 27, 299, 764
BccI CCATC 1 cut(s) 925
BceAI ACGGC 7 cut(s) 14, 68, 186, 196, 235, 882, 1053
BciT130I CCWGG 2 cut(s) 223, 353
BciVI GTATCC 2 cut(s) 833, 1172
BcnI CCSGG 3 cut(s) 128, 231, 1070
BcoDI GTCTC 3 cut(s) 91, 162, 1131
BfaI CTAG 2 cut(s) 1001, 1224
BfmI CTRYAG 1 cut(s) 13
BfoI RGCGCY 2 cut(s) 27, 212
BfrI CTTAAG 1 cut(s) 497
BfuI GTATCC 2 cut(s) 833, 1172
BglI GCCNNNNNGGC 1 cut(s) 206
Bme1390I CCNGG 5 cut(s) 128, 223, 231, 353, 1070
Bme18I GGWCC 1 cut(s) 1112
BmeT110I CYCGRG 1 cut(s) 184
BmgT120I GGNCC 2 cut(s) 326, 1112
BmiI GGNNCC 5 cut(s) 117, 210, 828, 936, 1113
BmrFI CCNGG 5 cut(s) 128, 223, 231, 353, 1070
BmsI GCATC 1 cut(s) 880
BpiI GAAGAC 1 cut(s) 637
Bpu10I CCTNAGC 2 cut(s) 477, 665
BpuMI CCSGG 3 cut(s) 128, 231, 1070
BsaAI YACGTR 2 cut(s) 844, 1211
BsaHI GRCGYC 2 cut(s) 209, 227
BsaJI CCNNGG 5 cut(s) 230, 352, 659, 771, 1174
BsaWI WCCGGW 2 cut(s) 243, 334
Bsc4I CCNNNNNNNGG 5 cut(s) 134, 323, 577, 660, 836
Bse118I RCCGGY 4 cut(s) 112, 134, 217, 268
Bse1I ACTGG 1 cut(s) 1145
Bse3DI GCAATG 2 cut(s) 7, 762
BseBI CCWGG 2 cut(s) 223, 353
BseDI CCNNGG 5 cut(s) 230, 352, 659, 771, 1174
BseGI GGATG 1 cut(s) 676
BseLI CCNNNNNNNGG 5 cut(s) 134, 323, 577, 660, 836
BseMI GCAATG 2 cut(s) 7, 762
BseMII CTCAG 1 cut(s) 1147
BseNI ACTGG 1 cut(s) 1145
BseRI GAGGAG 3 cut(s) 67, 353, 1100
BseXI GCAGC 3 cut(s) 27, 299, 764
BsgI GTGCAG 1 cut(s) 771
Bsh1236I CGCG 1 cut(s) 944
Bsh1285I CGRYCG 2 cut(s) 132, 1159
BshFI GGCC 4 cut(s) 41, 221, 250, 328
BshNI GGYRCC 2 cut(s) 115, 208
BsiEI CGRYCG 2 cut(s) 132, 1159
BsiHKAI GWGCWC 1 cut(s) 795
BsiHKCI CYCGRG 1 cut(s) 184
BslFI GGGAC 1 cut(s) 832
BslI CCNNNNNNNGG 5 cut(s) 134, 323, 577, 660, 836
BsmAI GTCTC 3 cut(s) 91, 162, 1131
BsmBI CGTCTC 2 cut(s) 91, 162
BsmFI GGGAC 1 cut(s) 832
BsnI GGCC 4 cut(s) 41, 221, 250, 328
BsoBI CYCGRG 1 cut(s) 184
Bsp1286I GDGCHC 3 cut(s) 128, 191, 795
Bsp143I GATC 4 cut(s) 279, 522, 631, 1143
Bsp19I CCATGG 1 cut(s) 659
BspANI GGCC 4 cut(s) 41, 221, 250, 328
BspCNI CTCAG 1 cut(s) 1146
BspFNI CGCG 1 cut(s) 944
BspHI TCATGA 2 cut(s) 873, 913
BspLI GGNNCC 5 cut(s) 117, 210, 828, 936, 1113
BspMAI CTGCAG 1 cut(s) 17
BspPI GGATC 1 cut(s) 1151
BspT107I GGYRCC 2 cut(s) 115, 208
BspTI CTTAAG 1 cut(s) 497
BsrBI CCGCTC 1 cut(s) 193
BsrDI GCAATG 2 cut(s) 7, 762
BsrFI RCCGGY 4 cut(s) 112, 134, 217, 268
BsrI ACTGG 1 cut(s) 1145
BssAI RCCGGY 4 cut(s) 112, 134, 217, 268
BssECI CCNNGG 5 cut(s) 230, 352, 659, 771, 1174
BssMI GATC 4 cut(s) 279, 522, 631, 1143
BssNI GRCGYC 2 cut(s) 209, 227
BssT1I CCWWGG 3 cut(s) 659, 771, 1174
Bst2UI CCWGG 2 cut(s) 223, 353
Bst6I CTCTTC 1 cut(s) 960
BstACI GRCGYC 2 cut(s) 209, 227
BstAFI CTTAAG 1 cut(s) 497
BstAPI GCANNNNNTGC 1 cut(s) 989
BstBAI YACGTR 2 cut(s) 844, 1211
BstC8I GCNNGC 5 cut(s) 136, 191, 219, 270, 750
BstDEI CTNAG 5 cut(s) 477, 665, 803, 1133, 1166
BstDSI CCRYGG 1 cut(s) 659
BstF5I GGATG 1 cut(s) 676
BstFNI CGCG 1 cut(s) 944
BstH2I RGCGCY 2 cut(s) 27, 212
BstHHI GCGC 3 cut(s) 26, 211, 946
BstKTI GATC 4 cut(s) 282, 525, 634, 1146
BstMAI GTCTC 3 cut(s) 91, 162, 1131
BstMBI GATC 4 cut(s) 279, 522, 631, 1143
BstMCI CGRYCG 2 cut(s) 132, 1159
BstNI CCWGG 2 cut(s) 223, 353
BstSCI CCNGG 5 cut(s) 126, 221, 229, 351, 1068
BstSFI CTRYAG 1 cut(s) 13
BstSNI TACGTA 1 cut(s) 1211
BstUI CGCG 1 cut(s) 944
BstV1I GCAGC 3 cut(s) 27, 299, 764
BstV2I GAAGAC 1 cut(s) 637
BsuI GTATCC 2 cut(s) 833, 1172
BsuRI GGCC 4 cut(s) 41, 221, 250, 328
BtgI CCRYGG 1 cut(s) 659
BtgZI GCGATG 1 cut(s) 153
BtsCI GGATG 1 cut(s) 676
Cac8I GCNNGC 5 cut(s) 136, 191, 219, 270, 750
CaiI CAGNNNCTG 1 cut(s) 1140
CciI TCATGA 2 cut(s) 873, 913
CfoI GCGC 3 cut(s) 26, 211, 946
Cfr10I RCCGGY 4 cut(s) 112, 134, 217, 268
Cfr13I GGNCC 2 cut(s) 326, 1112
CseI GACGC 1 cut(s) 235
Csp6I GTAC 2 cut(s) 1035, 1212
CviAII CATG 7 cut(s) 283, 660, 836, 874, 895, 914, 1196
CviQI GTAC 2 cut(s) 1035, 1212
DdeI CTNAG 5 cut(s) 477, 665, 803, 1133, 1166
DinI GGCGCC 1 cut(s) 210
DpnI GATC 4 cut(s) 281, 524, 633, 1145
DpnII GATC 4 cut(s) 279, 522, 631, 1143
EaeI YGGCCR 3 cut(s) 39, 219, 248
Eam1104I CTCTTC 1 cut(s) 960
EarI CTCTTC 1 cut(s) 960
EciI GGCGGA 2 cut(s) 70, 316
Ecl136II GAGCTC 1 cut(s) 793
Eco105I TACGTA 1 cut(s) 1211
Eco130I CCWWGG 3 cut(s) 659, 771, 1174
Eco24I GRGCYC 3 cut(s) 128, 191, 795
Eco47I GGWCC 1 cut(s) 1112
Eco53kI GAGCTC 1 cut(s) 793
Eco88I CYCGRG 1 cut(s) 184
EcoICRI GAGCTC 1 cut(s) 793
EcoO109I RGGNCCY 1 cut(s) 1112
EcoRII CCWGG 2 cut(s) 221, 351
EcoT14I CCWWGG 3 cut(s) 659, 771, 1174
EcoT38I GRGCYC 3 cut(s) 128, 191, 795
EgeI GGCGCC 1 cut(s) 210
EheI GGCGCC 1 cut(s) 210
ErhI CCWWGG 3 cut(s) 659, 771, 1174
Esp3I CGTCTC 2 cut(s) 91, 162
FaeI CATG 7 cut(s) 286, 663, 839, 877, 898, 917, 1199
FalI AAGNNNNNCTT 2 cut(s) 1024, 1056
FaqI GGGAC 1 cut(s) 832
FatI CATG 7 cut(s) 282, 659, 835, 873, 894, 913, 1195
FauI CCCGC 3 cut(s) 76, 117, 198
FauNDI CATATG 1 cut(s) 724
FokI GGATG 1 cut(s) 683
FriOI GRGCYC 3 cut(s) 128, 191, 795
FspBI CTAG 2 cut(s) 1001, 1224
GlaI GCGC 3 cut(s) 25, 210, 945
HaeII RGCGCY 2 cut(s) 27, 212
HaeIII GGCC 4 cut(s) 41, 221, 250, 328
HgaI GACGC 1 cut(s) 235
HhaI GCGC 3 cut(s) 26, 211, 946
Hin1I GRCGYC 2 cut(s) 209, 227
Hin1II CATG 7 cut(s) 286, 663, 839, 877, 898, 917, 1199
Hin6I GCGC 3 cut(s) 24, 209, 944
HinP1I GCGC 3 cut(s) 24, 209, 944
HinfI GANTC 4 cut(s) 175, 613, 902, 1105
HphI GGTGA 2 cut(s) 341, 592
Hpy166II GTNNAC 1 cut(s) 816
Hpy188I TCNGA 4 cut(s) 863, 1136, 1148, 1156
Hpy188III TCNNGA 6 cut(s) 184, 520, 603, 874, 914, 1010
Hpy8I GTNNAC 1 cut(s) 816
Hpy99I CGWCG 2 cut(s) 217, 268
HpyAV CCTTC 8 cut(s) 313, 362, 430, 481, 754, 892, 1007, 1055
HpyCH4IV ACGT 2 cut(s) 843, 1210
HpyCH4V TGCA 5 cut(s) 15, 752, 992, 1031, 1195
HpyF3I CTNAG 5 cut(s) 477, 665, 803, 1133, 1166
HpySE526I ACGT 2 cut(s) 843, 1210
Hsp92I GRCGYC 2 cut(s) 209, 227
Hsp92II CATG 7 cut(s) 286, 663, 839, 877, 898, 917, 1199
HspAI GCGC 3 cut(s) 24, 209, 944
KasI GGCGCC 1 cut(s) 208
KroI GCCGGC 3 cut(s) 134, 217, 268
KroNI GCCGGC 3 cut(s) 136, 219, 270
Kzo9I GATC 4 cut(s) 279, 522, 631, 1143
LmnI GCTCC 2 cut(s) 198, 934
Lsp1109I GCAGC 3 cut(s) 27, 299, 764
LweI GCATC 1 cut(s) 880
MaeI CTAG 2 cut(s) 1001, 1224
MaeII ACGT 2 cut(s) 843, 1210
MaeIII GTNAC 1 cut(s) 1201
MalI GATC 4 cut(s) 281, 524, 633, 1145
MbiI CCGCTC 1 cut(s) 193
MboI GATC 4 cut(s) 279, 522, 631, 1143
MboII GAAGA 9 cut(s) 157, 374, 377, 418, 575, 637, 797, 977, 1036
MhlI GDGCHC 3 cut(s) 128, 191, 795
MlsI TGGCCA 1 cut(s) 41
MluCI AATT 6 cut(s) 422, 428, 856, 880, 953, 1187
MluNI TGGCCA 1 cut(s) 41
Mly113I GGCGCC 1 cut(s) 209
MlyI GAGTC 2 cut(s) 184, 911
MmeI TCCRAC 1 cut(s) 1179
Mox20I TGGCCA 1 cut(s) 41
MreI CGCCGGCG 2 cut(s) 134, 268
MroNI GCCGGC 3 cut(s) 134, 217, 268
MscI TGGCCA 1 cut(s) 41
MseI TTAA 1 cut(s) 498
MslI CAYNNNNRTG 1 cut(s) 926
Msp20I TGGCCA 1 cut(s) 41
MspCI CTTAAG 1 cut(s) 497
MspR9I CCNGG 5 cut(s) 128, 223, 231, 353, 1070
MvaI CCWGG 2 cut(s) 223, 353
MvnI CGCG 1 cut(s) 944
NaeI GCCGGC 3 cut(s) 136, 219, 270
NarI GGCGCC 1 cut(s) 209
NciI CCSGG 3 cut(s) 128, 231, 1070
NcoI CCATGG 1 cut(s) 659
NdeI CATATG 1 cut(s) 724
NdeII GATC 4 cut(s) 279, 522, 631, 1143
NgoMIV GCCGGC 3 cut(s) 134, 217, 268
NlaIII CATG 7 cut(s) 286, 663, 839, 877, 898, 917, 1199
NlaIV GGNNCC 5 cut(s) 117, 210, 828, 936, 1113
NmeAIII GCCGAG 2 cut(s) 147, 452
NmuCI GTSAC 1 cut(s) 1201
PagI TCATGA 2 cut(s) 873, 913
PcsI WCGNNNNNNNCGW 2 cut(s) 176, 849
PdiI GCCGGC 3 cut(s) 136, 219, 270
PfeI GAWTC 2 cut(s) 613, 1105
PleI GAGTC 2 cut(s) 183, 910
PluTI GGCGCC 1 cut(s) 212
PpsI GAGTC 2 cut(s) 183, 910
Ppu21I YACGTR 2 cut(s) 844, 1211
PpuMI RGGWCCY 1 cut(s) 1112
Psp124BI GAGCTC 1 cut(s) 795
Psp5II RGGWCCY 1 cut(s) 1112
Psp6I CCWGG 2 cut(s) 221, 351
PspGI CCWGG 2 cut(s) 221, 351
PspN4I GGNNCC 5 cut(s) 117, 210, 828, 936, 1113
PspPI GGNCC 2 cut(s) 326, 1112
PspPPI RGGWCCY 1 cut(s) 1112
PstI CTGCAG 1 cut(s) 17
PstNI CAGNNNCTG 1 cut(s) 1140
RsaI GTAC 2 cut(s) 1036, 1213
RsaNI GTAC 2 cut(s) 1035, 1212
RseI CAYNNNNRTG 1 cut(s) 926
SacI GAGCTC 1 cut(s) 795
SaqAI TTAA 1 cut(s) 498
Sau3AI GATC 4 cut(s) 279, 522, 631, 1143
Sau96I GGNCC 2 cut(s) 326, 1112
SchI GAGTC 2 cut(s) 184, 911
ScrFI CCNGG 5 cut(s) 128, 223, 231, 353, 1070
SduI GDGCHC 3 cut(s) 128, 191, 795
SfaNI GCATC 1 cut(s) 880
SfcI CTRYAG 1 cut(s) 13
SfoI GGCGCC 1 cut(s) 210
SgrAI CRCCGGYG 3 cut(s) 112, 134, 268
SinI GGWCC 1 cut(s) 1112
SmiMI CAYNNNNRTG 1 cut(s) 926
SmlI CTYRAG 1 cut(s) 497
SmoI CTYRAG 1 cut(s) 497
SnaBI TACGTA 1 cut(s) 1211
Sse9I AATT 6 cut(s) 422, 428, 856, 880, 953, 1187
SspDI GGCGCC 1 cut(s) 208
SspMI CTAG 2 cut(s) 1001, 1224
SstI GAGCTC 1 cut(s) 795
StyD4I CCNGG 5 cut(s) 126, 221, 229, 351, 1068
StyI CCWWGG 3 cut(s) 659, 771, 1174
TaiI ACGT 2 cut(s) 846, 1213
TaqI TCGA 2 cut(s) 852, 905
TaqII GACCGA 1 cut(s) 1173
TasI AATT 6 cut(s) 422, 428, 856, 880, 953, 1187
TauI GCSGC 7 cut(s) 29, 74, 121, 259, 301, 360, 983
TfiI GAWTC 2 cut(s) 613, 1105
Tru1I TTAA 1 cut(s) 498
Tru9I TTAA 1 cut(s) 498
TseFI GTSAC 1 cut(s) 1201
TseI GCWGC 4 cut(s) 12, 15, 287, 752
Tsp45I GTSAC 1 cut(s) 1201
TspDTI ATGAA 6 cut(s) 687, 773, 890, 902, 911, 1118
TspGWI ACGGA 5 cut(s) 79, 144, 168, 252, 560
Vha464I CTTAAG 1 cut(s) 497
VpaK11BI GGWCC 1 cut(s) 1112
XapI RAATTY 3 cut(s) 422, 880, 1187
XspI CTAG 2 cut(s) 1001, 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.