HIRAN
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HIRAN | PF08797 | 400 - 490 | 2.2e-15 | HIRAN domain |
| ResIII | PF04851 | 614 - 853 | 5.1e-06 | Type III restriction enzyme, res subunit |
| SNF2-rel_dom | PF00176 | 619 - 986 | 2.7e-73 | SNF2-related domain |
| DEAD | PF00270 | 689 - 835 | 1.9e-07 | DEAD/DEAH box helicase |
| zf-C3HC4_3 | PF13920 | 1037 - 1084 | 1.5e-07 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4_2 | PF13923 | 1039 - 1079 | 3.3e-06 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_2 | PF13639 | 1039 - 1080 | 8.8e-06 | Ring finger domain |
| zf-C3HC4 | PF00097 | 1040 - 1079 | 1.2e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_UBOX | PF13445 | 1040 - 1077 | 1.1e-07 | RING-type zinc-finger |
| Helicase_C | PF00271 | 1111 - 1224 | 1.3e-22 | Helicase conserved C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2789 |
| AatII | GACGTC | 1 cut(s) | 2787 |
| AccB1I | GGYRCC | 3 cut(s) | 931, 1426, 1969 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2875, 3218 |
| AccI | GTMKAC | 2 cut(s) | 1345, 2932 |
| AccII | CGCG | 2 cut(s) | 2345, 3099 |
| AciI | CCGC | 8 cut(s) | 28, 158, 632, 1424, 1522, 1610, 2046, 3632 |
| AclI | AACGTT | 1 cut(s) | 1645 |
| AclWI | GGATC | 7 cut(s) | 193, 2666, 2844, 3140, 3429, 3608, 3621 |
| AcoI | YGGCCR | 3 cut(s) | 3, 1692, 2111 |
| AcsI | RAATTY | 5 cut(s) | 361, 1088, 1264, 1654, 3657 |
| AcuI | CTGAAG | 4 cut(s) | 999, 2705, 2832, 3269 |
| AcvI | CACGTG | 1 cut(s) | 1839 |
| AcyI | GRCGYC | 4 cut(s) | 932, 938, 1427, 2784 |
| AdeI | CACNNNGTG | 1 cut(s) | 3164 |
| AfaI | GTAC | 5 cut(s) | 715, 862, 1831, 1856, 2990 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 710, 876, 1521, 2120, 2266, 2875, 3218 |
| AflIII | ACRYGT | 1 cut(s) | 1838 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2302 |
| AjnI | CCWGG | 3 cut(s) | 780, 927, 2113 |
| AleI | CACNNNNGTG | 1 cut(s) | 1837 |
| Alw21I | GWGCWC | 2 cut(s) | 2922, 3169 |
| Alw26I | GTCTC | 5 cut(s) | 1731, 1843, 2273, 3194, 3558 |
| AlwI | GGATC | 7 cut(s) | 193, 2666, 2844, 3140, 3429, 3608, 3621 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1729 |
| Ama87I | CYCGRG | 2 cut(s) | 2915, 3063 |
| AoxI | GGCC | 5 cut(s) | 3, 1692, 2111, 2116, 2708 |
| ApeKI | GCWGC | 7 cut(s) | 1682, 1790, 1916, 2501, 3340, 3590, 3733 |
| ApoI | RAATTY | 5 cut(s) | 361, 1088, 1264, 1654, 3657 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1532, 1564, 3400, 3432 |
| AseI | ATTAAT | 1 cut(s) | 804 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3515 |
| AspLEI | GCGC | 4 cut(s) | 934, 1429, 1790, 3207 |
| AspS9I | GGNCC | 1 cut(s) | 565 |
| AsuC2I | CCSGG | 1 cut(s) | 2129 |
| AsuHPI | GGTGA | 5 cut(s) | 407, 703, 1159, 2012, 2681 |
| AvaI | CYCGRG | 2 cut(s) | 2915, 3063 |
| AvaII | GGWCC | 1 cut(s) | 565 |
| AxyI | CCTNAGG | 1 cut(s) | 1623 |
| BaeGI | GKGCMC | 1 cut(s) | 1972 |
| BalI | TGGCCA | 2 cut(s) | 5, 1694 |
| BamHI | GGATCC | 1 cut(s) | 3613 |
| BanI | GGYRCC | 3 cut(s) | 931, 1426, 1969 |
| BanII | GRGCYC | 1 cut(s) | 2922 |
| BauI | CACGAG | 1 cut(s) | 2676 |
| BbrPI | CACGTG | 1 cut(s) | 1839 |
| BbsI | GAAGAC | 4 cut(s) | 792, 2582, 3315, 3595 |
| Bbv12I | GWGCWC | 2 cut(s) | 2922, 3169 |
| BbvCI | CCTCAGC | 1 cut(s) | 2398 |
| BbvI | GCAGC | 7 cut(s) | 1694, 1777, 1928, 2488, 3327, 3602, 3745 |
| BceAI | ACGGC | 3 cut(s) | 1080, 2126, 3165 |
| BciT130I | CCWGG | 3 cut(s) | 782, 929, 2115 |
| BciVI | GTATCC | 3 cut(s) | 935, 964, 3706 |
| BclI | TGATCA | 1 cut(s) | 2691 |
| BcnI | CCSGG | 1 cut(s) | 2129 |
| BcoDI | GTCTC | 5 cut(s) | 1731, 1843, 2273, 3194, 3558 |
| BfaI | CTAG | 5 cut(s) | 113, 293, 815, 2960, 3198 |
| BfmI | CTRYAG | 4 cut(s) | 492, 3138, 3235, 3588 |
| BfoI | RGCGCY | 4 cut(s) | 935, 1430, 1791, 3208 |
| BfuI | GTATCC | 3 cut(s) | 935, 964, 3706 |
| BglII | AGATCT | 2 cut(s) | 1388, 2578 |
| BisI | GCNGC | 8 cut(s) | 1425, 1683, 1791, 1917, 2502, 3341, 3591, 3734 |
| BlsI | GCNGC | 8 cut(s) | 1426, 1684, 1792, 1918, 2503, 3342, 3592, 3735 |
| Bme1390I | CCNGG | 4 cut(s) | 782, 929, 2115, 2129 |
| Bme18I | GGWCC | 1 cut(s) | 565 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2302 |
| BmeT110I | CYCGRG | 2 cut(s) | 2915, 3063 |
| BmgT120I | GGNCC | 1 cut(s) | 565 |
| BmiI | GGNNCC | 9 cut(s) | 429, 567, 933, 1029, 1128, 1428, 1758, 1971, 3615 |
| BmrFI | CCNGG | 4 cut(s) | 782, 929, 2115, 2129 |
| BmrI | ACTGGG | 1 cut(s) | 2559 |
| BmsI | GCATC | 5 cut(s) | 15, 1437, 2050, 2706, 3720 |
| BmuI | ACTGGG | 1 cut(s) | 2559 |
| BpiI | GAAGAC | 4 cut(s) | 792, 2582, 3315, 3595 |
| BpmI | CTGGAG | 6 cut(s) | 153, 867, 1553, 1751, 3152, 3585 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2398 |
| BpuEI | CTTGAG | 8 cut(s) | 773, 1056, 1565, 1829, 2297, 2481, 3329, 3827 |
| BpuMI | CCSGG | 1 cut(s) | 2129 |
| BsaAI | YACGTR | 1 cut(s) | 1839 |
| BsaHI | GRCGYC | 4 cut(s) | 932, 938, 1427, 2784 |
| BsaI | GGTCTC | 1 cut(s) | 1843 |
| BsaJI | CCNNGG | 5 cut(s) | 2064, 2119, 2244, 2615, 3617 |
| BsaWI | WCCGGW | 2 cut(s) | 1171, 3792 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2539, 2569 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 710, 876, 1521, 2120, 2266, 2875, 3218 |
| Bse118I | RCCGGY | 1 cut(s) | 154 |
| Bse1I | ACTGG | 9 cut(s) | 136, 905, 1130, 1880, 2014, 2554, 2869, 3317, 3403 |
| Bse21I | CCTNAGG | 1 cut(s) | 1623 |
| Bse3DI | GCAATG | 2 cut(s) | 2530, 3437 |
| BseBI | CCWGG | 3 cut(s) | 782, 929, 2115 |
| BseDI | CCNNGG | 5 cut(s) | 2064, 2119, 2244, 2615, 3617 |
| BseGI | GGATG | 8 cut(s) | 769, 1558, 1669, 1884, 1930, 2910, 3735, 3765 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 710, 876, 1521, 2120, 2266, 2875, 3218 |
| BseMI | GCAATG | 2 cut(s) | 2530, 3437 |
| BseMII | CTCAG | 8 cut(s) | 159, 1614, 1752, 1838, 1881, 2412, 2711, 3500 |
| BseNI | ACTGG | 9 cut(s) | 136, 905, 1130, 1880, 2014, 2554, 2869, 3317, 3403 |
| BseRI | GAGGAG | 4 cut(s) | 2912, 2915, 3582, 3824 |
| BseSI | GKGCMC | 1 cut(s) | 1972 |
| BseXI | GCAGC | 7 cut(s) | 1694, 1777, 1928, 2488, 3327, 3602, 3745 |
| BseYI | CCCAGC | 1 cut(s) | 1938 |
| Bsh1236I | CGCG | 2 cut(s) | 2345, 3099 |
| BshFI | GGCC | 5 cut(s) | 5, 1694, 2113, 2118, 2710 |
| BshNI | GGYRCC | 3 cut(s) | 931, 1426, 1969 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2922, 3169 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2915, 3063 |
| BsiSI | CCGG | 6 cut(s) | 155, 209, 1172, 2129, 3768, 3793 |
| BslFI | GGGAC | 5 cut(s) | 1283, 2082, 2226, 2566, 2756 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 710, 876, 1521, 2120, 2266, 2875, 3218 |
| BsmAI | GTCTC | 5 cut(s) | 1731, 1843, 2273, 3194, 3558 |
| BsmFI | GGGAC | 5 cut(s) | 1283, 2082, 2226, 2566, 2756 |
| BsnI | GGCC | 5 cut(s) | 5, 1694, 2113, 2118, 2710 |
| Bso31I | GGTCTC | 1 cut(s) | 1843 |
| BsoBI | CYCGRG | 2 cut(s) | 2915, 3063 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1972, 2922, 3169 |
| Bsp19I | CCATGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| BspACI | CCGC | 8 cut(s) | 28, 158, 632, 1424, 1522, 1610, 2046, 3632 |
| BspANI | GGCC | 5 cut(s) | 5, 1694, 2113, 2118, 2710 |
| BspCNI | CTCAG | 8 cut(s) | 158, 1615, 1753, 1839, 1882, 2411, 2712, 3499 |
| BspFNI | CGCG | 2 cut(s) | 2345, 3099 |
| BspHI | TCATGA | 2 cut(s) | 2362, 3651 |
| BspLI | GGNNCC | 9 cut(s) | 429, 567, 933, 1029, 1128, 1428, 1758, 1971, 3615 |
| BspMAI | CTGCAG | 3 cut(s) | 3142, 3239, 3592 |
| BspPI | GGATC | 7 cut(s) | 193, 2666, 2844, 3140, 3429, 3608, 3621 |
| BspQI | GCTCTTC | 2 cut(s) | 3380, 3633 |
| BspT107I | GGYRCC | 3 cut(s) | 931, 1426, 1969 |
| BspTNI | GGTCTC | 1 cut(s) | 1843 |
| BsrDI | GCAATG | 2 cut(s) | 2530, 3437 |
| BsrFI | RCCGGY | 1 cut(s) | 154 |
| BsrI | ACTGG | 9 cut(s) | 136, 905, 1130, 1880, 2014, 2554, 2869, 3317, 3403 |
| BssAI | RCCGGY | 1 cut(s) | 154 |
| BssECI | CCNNGG | 5 cut(s) | 2064, 2119, 2244, 2615, 3617 |
| BssNI | GRCGYC | 4 cut(s) | 932, 938, 1427, 2784 |
| BssSI | CACGAG | 1 cut(s) | 2676 |
| BssT1I | CCWWGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| Bst2BI | CACGAG | 1 cut(s) | 2676 |
| Bst2UI | CCWGG | 3 cut(s) | 782, 929, 2115 |
| Bst6I | CTCTTC | 8 cut(s) | 948, 1569, 1746, 3245, 3380, 3442, 3490, 3633 |
| BstACI | GRCGYC | 4 cut(s) | 932, 938, 1427, 2784 |
| BstBAI | YACGTR | 1 cut(s) | 1839 |
| BstC8I | GCNNGC | 3 cut(s) | 3203, 3483, 3645 |
| BstDSI | CCRYGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| BstEII | GGTNACC | 1 cut(s) | 2123 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 708 |
| BstF5I | GGATG | 8 cut(s) | 769, 1558, 1669, 1884, 1930, 2910, 3735, 3765 |
| BstFNI | CGCG | 2 cut(s) | 2345, 3099 |
| BstH2I | RGCGCY | 4 cut(s) | 935, 1430, 1791, 3208 |
| BstHHI | GCGC | 4 cut(s) | 934, 1429, 1790, 3207 |
| BstMAI | GTCTC | 5 cut(s) | 1731, 1843, 2273, 3194, 3558 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 155, 1691, 2507, 2716, 3234, 3387 |
| BstNI | CCWGG | 3 cut(s) | 782, 929, 2115 |
| BstNSI | RCATGY | 1 cut(s) | 2609 |
| BstPI | GGTNACC | 1 cut(s) | 2123 |
| BstSCI | CCNGG | 4 cut(s) | 780, 927, 2113, 2127 |
| BstSFI | CTRYAG | 4 cut(s) | 492, 3138, 3235, 3588 |
| BstSLI | GKGCMC | 1 cut(s) | 1972 |
| BstUI | CGCG | 2 cut(s) | 2345, 3099 |
| BstV1I | GCAGC | 7 cut(s) | 1694, 1777, 1928, 2488, 3327, 3602, 3745 |
| BstV2I | GAAGAC | 4 cut(s) | 792, 2582, 3315, 3595 |
| BstX2I | RGATCY | 6 cut(s) | 185, 1388, 2578, 2849, 3421, 3613 |
| BstYI | RGATCY | 6 cut(s) | 185, 1388, 2578, 2849, 3421, 3613 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1623 |
| BsuI | GTATCC | 3 cut(s) | 935, 964, 3706 |
| BsuRI | GGCC | 5 cut(s) | 5, 1694, 2113, 2118, 2710 |
| BtgI | CCRYGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| BtgZI | GCGATG | 2 cut(s) | 353, 3114 |
| BtsCI | GGATG | 8 cut(s) | 769, 1558, 1669, 1884, 1930, 2910, 3735, 3765 |
| BtsIMutI | CAGTG | 6 cut(s) | 129, 1497, 1649, 2298, 3410, 3723 |
| Cac8I | GCNNGC | 3 cut(s) | 3203, 3483, 3645 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1729 |
| CciI | TCATGA | 2 cut(s) | 2362, 3651 |
| CfoI | GCGC | 4 cut(s) | 934, 1429, 1790, 3207 |
| Cfr10I | RCCGGY | 1 cut(s) | 154 |
| Cfr13I | GGNCC | 1 cut(s) | 565 |
| CseI | GACGC | 3 cut(s) | 26, 946, 2351 |
| Csp6I | GTAC | 5 cut(s) | 714, 861, 1830, 1855, 2989 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1312, 1347 |
| CviQI | GTAC | 5 cut(s) | 714, 861, 1830, 1855, 2989 |
| DinI | GGCGCC | 2 cut(s) | 933, 1428 |
| DraIII | CACNNNGTG | 1 cut(s) | 3164 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2789 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2302 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2789 |
| EaeI | YGGCCR | 3 cut(s) | 3, 1692, 2111 |
| Eam1104I | CTCTTC | 8 cut(s) | 948, 1569, 1746, 3245, 3380, 3442, 3490, 3633 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2302 |
| EarI | CTCTTC | 8 cut(s) | 948, 1569, 1746, 3245, 3380, 3442, 3490, 3633 |
| EciI | GGCGGA | 4 cut(s) | 173, 1537, 1625, 2061 |
| Ecl136II | GAGCTC | 1 cut(s) | 2920 |
| Eco130I | CCWWGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| Eco24I | GRGCYC | 1 cut(s) | 2922 |
| Eco31I | GGTCTC | 1 cut(s) | 1843 |
| Eco47I | GGWCC | 1 cut(s) | 565 |
| Eco53kI | GAGCTC | 1 cut(s) | 2920 |
| Eco57I | CTGAAG | 4 cut(s) | 999, 2705, 2832, 3269 |
| Eco72I | CACGTG | 1 cut(s) | 1839 |
| Eco81I | CCTNAGG | 1 cut(s) | 1623 |
| Eco88I | CYCGRG | 2 cut(s) | 2915, 3063 |
| Eco91I | GGTNACC | 1 cut(s) | 2123 |
| EcoICRI | GAGCTC | 1 cut(s) | 2920 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 708 |
| EcoO65I | GGTNACC | 1 cut(s) | 2123 |
| EcoRI | GAATTC | 1 cut(s) | 3657 |
| EcoRII | CCWGG | 3 cut(s) | 780, 927, 2113 |
| EcoT14I | CCWWGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| EcoT38I | GRGCYC | 1 cut(s) | 2922 |
| EgeI | GGCGCC | 2 cut(s) | 933, 1428 |
| EheI | GGCGCC | 2 cut(s) | 933, 1428 |
| ErhI | CCWWGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| FaqI | GGGAC | 5 cut(s) | 1283, 2082, 2226, 2566, 2756 |
| FauNDI | CATATG | 2 cut(s) | 898, 2193 |
| FbaI | TGATCA | 1 cut(s) | 2691 |
| FblI | GTMKAC | 2 cut(s) | 1345, 2932 |
| Fnu4HI | GCNGC | 8 cut(s) | 1425, 1683, 1791, 1917, 2502, 3341, 3591, 3734 |
| FokI | GGATG | 8 cut(s) | 776, 1545, 1676, 1891, 1917, 2897, 3742, 3772 |
| FriOI | GRGCYC | 1 cut(s) | 2922 |
| Fsp4HI | GCNGC | 8 cut(s) | 1425, 1683, 1791, 1917, 2502, 3341, 3591, 3734 |
| FspBI | CTAG | 5 cut(s) | 113, 293, 815, 2960, 3198 |
| GlaI | GCGC | 4 cut(s) | 933, 1428, 1789, 3206 |
| GluI | GCNGC | 8 cut(s) | 1425, 1683, 1791, 1917, 2502, 3341, 3591, 3734 |
| GsaI | CCCAGC | 1 cut(s) | 1942 |
| GsuI | CTGGAG | 6 cut(s) | 153, 867, 1553, 1751, 3152, 3585 |
| HaeII | RGCGCY | 4 cut(s) | 935, 1430, 1791, 3208 |
| HaeIII | GGCC | 5 cut(s) | 5, 1694, 2113, 2118, 2710 |
| HapII | CCGG | 6 cut(s) | 155, 209, 1172, 2129, 3768, 3793 |
| HgaI | GACGC | 3 cut(s) | 26, 946, 2351 |
| HhaI | GCGC | 4 cut(s) | 934, 1429, 1790, 3207 |
| Hin1I | GRCGYC | 4 cut(s) | 932, 938, 1427, 2784 |
| Hin6I | GCGC | 4 cut(s) | 932, 1427, 1788, 3205 |
| HinP1I | GCGC | 4 cut(s) | 932, 1427, 1788, 3205 |
| HincII | GTYRAC | 3 cut(s) | 33, 175, 1721 |
| HindII | GTYRAC | 3 cut(s) | 33, 175, 1721 |
| HpaI | GTTAAC | 1 cut(s) | 33 |
| HpaII | CCGG | 6 cut(s) | 155, 209, 1172, 2129, 3768, 3793 |
| HphI | GGTGA | 5 cut(s) | 407, 703, 1159, 2012, 2681 |
| Hpy99I | CGWCG | 2 cut(s) | 940, 2786 |
| HpyCH4IV | ACGT | 4 cut(s) | 1645, 1838, 2784, 2821 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 155, 1691, 2507, 2716, 3234, 3387 |
| HpySE526I | ACGT | 4 cut(s) | 1645, 1838, 2784, 2821 |
| Hsp92I | GRCGYC | 4 cut(s) | 932, 938, 1427, 2784 |
| HspAI | GCGC | 4 cut(s) | 932, 1427, 1788, 3205 |
| KasI | GGCGCC | 2 cut(s) | 931, 1426 |
| Ksp22I | TGATCA | 1 cut(s) | 2691 |
| KspAI | GTTAAC | 1 cut(s) | 33 |
| LguI | GCTCTTC | 2 cut(s) | 3380, 3633 |
| Lsp1109I | GCAGC | 7 cut(s) | 1694, 1777, 1928, 2488, 3327, 3602, 3745 |
| LweI | GCATC | 5 cut(s) | 15, 1437, 2050, 2706, 3720 |
| MaeI | CTAG | 5 cut(s) | 113, 293, 815, 2960, 3198 |
| MaeII | ACGT | 4 cut(s) | 1645, 1838, 2784, 2821 |
| MaeIII | GTNAC | 8 cut(s) | 199, 1203, 1210, 1841, 1958, 2123, 2822, 2945 |
| MfeI | CAATTG | 2 cut(s) | 2091, 2623 |
| MflI | RGATCY | 6 cut(s) | 185, 1388, 2578, 2849, 3421, 3613 |
| MhlI | GDGCHC | 3 cut(s) | 1972, 2922, 3169 |
| MlsI | TGGCCA | 2 cut(s) | 5, 1694 |
| MluNI | TGGCCA | 2 cut(s) | 5, 1694 |
| Mly113I | GGCGCC | 2 cut(s) | 932, 1427 |
| MmeI | TCCRAC | 5 cut(s) | 948, 1114, 1863, 2045, 2801 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 1694 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3515 |
| MscI | TGGCCA | 2 cut(s) | 5, 1694 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1837, 2901 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 1694 |
| MspA1I | CMGCKG | 2 cut(s) | 1919, 3632 |
| MspI | CCGG | 6 cut(s) | 155, 209, 1172, 2129, 3768, 3793 |
| MspR9I | CCNGG | 4 cut(s) | 782, 929, 2115, 2129 |
| MunI | CAATTG | 2 cut(s) | 2091, 2623 |
| MvaI | CCWGG | 3 cut(s) | 782, 929, 2115 |
| MvnI | CGCG | 2 cut(s) | 2345, 3099 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 155, 1691, 2507, 2716, 3234, 3387 |
| NarI | GGCGCC | 2 cut(s) | 932, 1427 |
| NciI | CCSGG | 1 cut(s) | 2129 |
| NcoI | CCATGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| NdeI | CATATG | 2 cut(s) | 898, 2193 |
| NlaIV | GGNNCC | 9 cut(s) | 429, 567, 933, 1029, 1128, 1428, 1758, 1971, 3615 |
| NmeAIII | GCCGAG | 2 cut(s) | 2144, 2996 |
| NmuCI | GTSAC | 3 cut(s) | 1203, 1958, 2822 |
| NspI | RCATGY | 1 cut(s) | 2609 |
| OliI | CACNNNNGTG | 1 cut(s) | 1837 |
| PaeR7I | CTCGAG | 1 cut(s) | 2915 |
| PagI | TCATGA | 2 cut(s) | 2362, 3651 |
| PciSI | GCTCTTC | 2 cut(s) | 3380, 3633 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 209, 1791, 2116 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3515 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2875, 3218 |
| PfoI | TCCNGGA | 1 cut(s) | 780 |
| PkrI | GCNGC | 8 cut(s) | 1426, 1684, 1792, 1918, 2503, 3342, 3592, 3735 |
| PluTI | GGCGCC | 2 cut(s) | 935, 1430 |
| PmaCI | CACGTG | 1 cut(s) | 1839 |
| PmlI | CACGTG | 1 cut(s) | 1839 |
| Ppu21I | YACGTR | 1 cut(s) | 1839 |
| PshBI | ATTAAT | 1 cut(s) | 804 |
| Psp124BI | GAGCTC | 1 cut(s) | 2922 |
| Psp1406I | AACGTT | 1 cut(s) | 1645 |
| Psp6I | CCWGG | 3 cut(s) | 780, 927, 2113 |
| PspCI | CACGTG | 1 cut(s) | 1839 |
| PspEI | GGTNACC | 1 cut(s) | 2123 |
| PspFI | CCCAGC | 1 cut(s) | 1938 |
| PspGI | CCWGG | 3 cut(s) | 780, 927, 2113 |
| PspN4I | GGNNCC | 9 cut(s) | 429, 567, 933, 1029, 1128, 1428, 1758, 1971, 3615 |
| PspPI | GGNCC | 1 cut(s) | 565 |
| PspXI | VCTCGAGB | 1 cut(s) | 2915 |
| PstI | CTGCAG | 3 cut(s) | 3142, 3239, 3592 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1729 |
| PsuI | RGATCY | 6 cut(s) | 185, 1388, 2578, 2849, 3421, 3613 |
| PvuII | CAGCTG | 1 cut(s) | 1919 |
| RsaI | GTAC | 5 cut(s) | 715, 862, 1831, 1856, 2990 |
| RsaNI | GTAC | 5 cut(s) | 714, 861, 1830, 1855, 2989 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1837, 2901 |
| SacI | GAGCTC | 1 cut(s) | 2922 |
| SapI | GCTCTTC | 2 cut(s) | 3380, 3633 |
| SatI | GCNGC | 8 cut(s) | 1425, 1683, 1791, 1917, 2502, 3341, 3591, 3734 |
| Sau96I | GGNCC | 1 cut(s) | 565 |
| ScrFI | CCNGG | 4 cut(s) | 782, 929, 2115, 2129 |
| SduI | GDGCHC | 3 cut(s) | 1972, 2922, 3169 |
| SfaNI | GCATC | 5 cut(s) | 15, 1437, 2050, 2706, 3720 |
| SfcI | CTRYAG | 4 cut(s) | 492, 3138, 3235, 3588 |
| SfoI | GGCGCC | 2 cut(s) | 933, 1428 |
| Sfr274I | CTCGAG | 1 cut(s) | 2915 |
| SinI | GGWCC | 1 cut(s) | 565 |
| SlaI | CTCGAG | 1 cut(s) | 2915 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1837, 2901 |
| SmlI | CTYRAG | 9 cut(s) | 752, 1071, 1544, 1808, 2276, 2496, 2915, 3344, 3806 |
| SmoI | CTYRAG | 9 cut(s) | 752, 1071, 1544, 1808, 2276, 2496, 2915, 3344, 3806 |
| SsiI | CCGC | 8 cut(s) | 28, 158, 632, 1424, 1522, 1610, 2046, 3632 |
| SspDI | GGCGCC | 2 cut(s) | 931, 1426 |
| SspI | AATATT | 1 cut(s) | 2052 |
| SspMI | CTAG | 5 cut(s) | 113, 293, 815, 2960, 3198 |
| SstI | GAGCTC | 1 cut(s) | 2922 |
| StyD4I | CCNGG | 4 cut(s) | 780, 927, 2113, 2127 |
| StyI | CCWWGG | 4 cut(s) | 2064, 2244, 2615, 3617 |
| TaiI | ACGT | 4 cut(s) | 1648, 1841, 2787, 2824 |
| TaqII | GACCGA | 1 cut(s) | 3563 |
| TatI | WGTACW | 1 cut(s) | 1829 |
| TauI | GCSGC | 1 cut(s) | 1427 |
| TscAI | CASTG | 6 cut(s) | 136, 1504, 1656, 2305, 3410, 3723 |
| TseFI | GTSAC | 3 cut(s) | 1203, 1958, 2822 |
| TseI | GCWGC | 7 cut(s) | 1682, 1790, 1916, 2501, 3340, 3590, 3733 |
| Tsp45I | GTSAC | 3 cut(s) | 1203, 1958, 2822 |
| TspGWI | ACGGA | 3 cut(s) | 2918, 3281, 3742 |
| TspRI | CASTG | 6 cut(s) | 136, 1504, 1656, 2305, 3410, 3723 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2875, 3218 |
| VpaK11BI | GGWCC | 1 cut(s) | 565 |
| VspI | ATTAAT | 1 cut(s) | 804 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 708 |
| XapI | RAATTY | 5 cut(s) | 361, 1088, 1264, 1654, 3657 |
| XbaI | TCTAGA | 1 cut(s) | 292 |
| XceI | RCATGY | 1 cut(s) | 2609 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2622 |
| XhoI | CTCGAG | 1 cut(s) | 2915 |
| XmiI | GTMKAC | 2 cut(s) | 1345, 2932 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3515 |
| XspI | CTAG | 5 cut(s) | 113, 293, 815, 2960, 3198 |
| ZraI | GACGTC | 1 cut(s) | 2785 |