SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| UBA_RAD5A | PF24559 | 248 - 288 | 1.1e-09 | DNA repair protein RAD5A UBA domain |
| HIRAN | PF08797 | 348 - 436 | 4.8e-13 | HIRAN domain |
| SNF2-rel_dom | PF00176 | 566 - 926 | 2.1e-72 | SNF2-related domain |
| DEAD | PF00270 | 634 - 799 | 1.5e-06 | DEAD/DEAH box helicase |
| zf-C3HC4_3 | PF13920 | 987 - 1034 | 3.1e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_2 | PF13639 | 989 - 1030 | 5.1e-06 | Ring finger domain |
| zf-C3HC4_2 | PF13923 | 989 - 1029 | 8.7e-06 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4_4 | PF15227 | 990 - 1020 | 1e-06 | zinc finger of C3HC4-type, RING |
| zf-C3HC4 | PF00097 | 990 - 1029 | 1.1e-07 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_UBOX | PF13445 | 990 - 1027 | 6.3e-08 | RING-type zinc-finger |
| Helicase_C | PF00271 | 1065 - 1174 | 4.3e-23 | Helicase conserved C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 3404 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3068 |
| AccI | GTMKAC | 1 cut(s) | 1086 |
| AccII | CGCG | 1 cut(s) | 144 |
| AciI | CCGC | 9 cut(s) | 283, 350, 497, 825, 1031, 1634, 3136, 3417, 3482 |
| AcoI | YGGCCR | 2 cut(s) | 119, 721 |
| AcsI | RAATTY | 9 cut(s) | 21, 33, 762, 794, 988, 1123, 1856, 3430, 3507 |
| AcuI | CTGAAG | 3 cut(s) | 291, 545, 1593 |
| AcyI | GRCGYC | 1 cut(s) | 3401 |
| AdeI | CACNNNGTG | 1 cut(s) | 3014 |
| AfaI | GTAC | 3 cut(s) | 372, 1227, 2178 |
| AhlI | ACTAGT | 1 cut(s) | 2156 |
| AleI | CACNNNNGTG | 1 cut(s) | 2139 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2143, 2175 |
| Alw21I | GWGCWC | 6 cut(s) | 251, 814, 2323, 3019, 3625, 3666 |
| Alw26I | GTCTC | 4 cut(s) | 163, 825, 2518, 3368 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2111, 2633, 3227 |
| Ama87I | CYCGRG | 1 cut(s) | 3046 |
| ApeKI | GCWGC | 7 cut(s) | 842, 1265, 1631, 1784, 2213, 2216, 3440 |
| ApoI | RAATTY | 9 cut(s) | 21, 33, 762, 794, 988, 1123, 1856, 3430, 3507 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3250, 3282 |
| AseI | ATTAAT | 1 cut(s) | 2462 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 150, 558, 1506, 1555, 1832, 3365 |
| AspLEI | GCGC | 4 cut(s) | 69, 144, 340, 1057 |
| AspS9I | GGNCC | 3 cut(s) | 2310, 2574, 3071 |
| AsuC2I | CCSGG | 1 cut(s) | 85 |
| AsuNHI | GCTAGC | 1 cut(s) | 2873 |
| AvaI | CYCGRG | 1 cut(s) | 3046 |
| AvaII | GGWCC | 2 cut(s) | 2310, 3071 |
| BamHI | GGATCC | 1 cut(s) | 3463 |
| BanII | GRGCYC | 4 cut(s) | 91, 1665, 3625, 3666 |
| BauI | CACGAG | 1 cut(s) | 3066 |
| BbsI | GAAGAC | 6 cut(s) | 1347, 1481, 1925, 3032, 3064, 3445 |
| Bbv12I | GWGCWC | 6 cut(s) | 251, 814, 2323, 3019, 3625, 3666 |
| BbvI | GCAGC | 7 cut(s) | 854, 1252, 1643, 1796, 2200, 2228, 3452 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3197, 3231 |
| BciVI | GTATCC | 1 cut(s) | 2954 |
| BclI | TGATCA | 2 cut(s) | 105, 735 |
| BcnI | CCSGG | 1 cut(s) | 85 |
| BcoDI | GTCTC | 4 cut(s) | 163, 825, 2518, 3368 |
| BcuI | ACTAGT | 1 cut(s) | 2156 |
| BfaI | CTAG | 6 cut(s) | 1367, 1895, 1946, 2157, 2874, 3651 |
| BfmI | CTRYAG | 3 cut(s) | 2214, 2401, 3438 |
| BfuI | GTATCC | 1 cut(s) | 2954 |
| BglII | AGATCT | 1 cut(s) | 2395 |
| BisI | GCNGC | 9 cut(s) | 284, 843, 1266, 1632, 1785, 2214, 2217, 3136, 3441 |
| BlpI | GCTNAGC | 1 cut(s) | 287 |
| BlsI | GCNGC | 9 cut(s) | 285, 844, 1267, 1633, 1786, 2215, 2218, 3137, 3442 |
| Bme18I | GGWCC | 2 cut(s) | 2310, 3071 |
| BmeT110I | CYCGRG | 1 cut(s) | 3046 |
| BmgT120I | GGNCC | 3 cut(s) | 2310, 2574, 3071 |
| BmiI | GGNNCC | 9 cut(s) | 195, 315, 471, 501, 618, 1558, 1662, 2312, 3465 |
| BmrI | ACTGGG | 1 cut(s) | 2452 |
| BmsI | GCATC | 7 cut(s) | 270, 1278, 1360, 1891, 2620, 2872, 3452 |
| BmtI | GCTAGC | 1 cut(s) | 2877 |
| BmuI | ACTGGG | 1 cut(s) | 2452 |
| BpiI | GAAGAC | 6 cut(s) | 1347, 1481, 1925, 3032, 3064, 3445 |
| BpmI | CTGGAG | 3 cut(s) | 585, 1194, 1446 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2322 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 287 |
| BpuEI | CTTGAG | 1 cut(s) | 1257 |
| BpuMI | CCSGG | 1 cut(s) | 85 |
| Bsa29I | ATCGAT | 3 cut(s) | 261, 278, 1386 |
| BsaBI | GATNNNNATC | 1 cut(s) | 233 |
| BsaHI | GRCGYC | 1 cut(s) | 3401 |
| BsaI | GGTCTC | 3 cut(s) | 825, 2518, 3368 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1029, 1059, 1695, 1725, 2356, 2386, 2571, 2601 |
| Bse1I | ACTGG | 7 cut(s) | 602, 2077, 2267, 2371, 2447, 2677, 3418 |
| Bse3DI | GCAATG | 2 cut(s) | 1529, 2347 |
| Bse8I | GATNNNNATC | 1 cut(s) | 233 |
| BseCI | ATCGAT | 3 cut(s) | 261, 278, 1386 |
| BseJI | GATNNNNATC | 1 cut(s) | 233 |
| BseMI | GCAATG | 2 cut(s) | 1529, 2347 |
| BseNI | ACTGG | 7 cut(s) | 602, 2077, 2267, 2371, 2447, 2677, 3418 |
| BseXI | GCAGC | 7 cut(s) | 854, 1252, 1643, 1796, 2200, 2228, 3452 |
| BseYI | CCCAGC | 3 cut(s) | 1779, 2909, 3051 |
| BsgI | GTGCAG | 3 cut(s) | 1251, 1521, 1650 |
| Bsh1236I | CGCG | 1 cut(s) | 144 |
| Bsh1285I | CGRYCG | 3 cut(s) | 102, 770, 1186 |
| BshVI | ATCGAT | 3 cut(s) | 261, 278, 1386 |
| BsiEI | CGRYCG | 3 cut(s) | 102, 770, 1186 |
| BsiHKAI | GWGCWC | 6 cut(s) | 251, 814, 2323, 3019, 3625, 3666 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3046 |
| BsiSI | CCGG | 3 cut(s) | 84, 122, 3618 |
| BslFI | GGGAC | 8 cut(s) | 929, 1016, 1054, 1923, 2043, 2145, 2891, 2955 |
| BsmAI | GTCTC | 4 cut(s) | 163, 825, 2518, 3368 |
| BsmBI | CGTCTC | 1 cut(s) | 163 |
| BsmFI | GGGAC | 8 cut(s) | 929, 1016, 1054, 1923, 2043, 2145, 2891, 2955 |
| BsmI | GAATGC | 2 cut(s) | 827, 844 |
| Bso31I | GGTCTC | 3 cut(s) | 825, 2518, 3368 |
| BsoBI | CYCGRG | 1 cut(s) | 3046 |
| Bsp1286I | GDGCHC | 8 cut(s) | 91, 251, 814, 1665, 2323, 3019, 3625, 3666 |
| Bsp1407I | TGTACA | 1 cut(s) | 1225 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 287 |
| Bsp19I | CCATGG | 3 cut(s) | 27, 2432, 3467 |
| BspACI | CCGC | 9 cut(s) | 283, 350, 497, 825, 1031, 1634, 3136, 3417, 3482 |
| BspDI | ATCGAT | 3 cut(s) | 261, 278, 1386 |
| BspFNI | CGCG | 1 cut(s) | 144 |
| BspHI | TCATGA | 2 cut(s) | 649, 2781 |
| BspLI | GGNNCC | 9 cut(s) | 195, 315, 471, 501, 618, 1558, 1662, 2312, 3465 |
| BspMAI | CTGCAG | 2 cut(s) | 2218, 3442 |
| BspOI | GCTAGC | 1 cut(s) | 2877 |
| BspTNI | GGTCTC | 3 cut(s) | 825, 2518, 3368 |
| BsrDI | GCAATG | 2 cut(s) | 1529, 2347 |
| BsrGI | TGTACA | 1 cut(s) | 1225 |
| BsrI | ACTGG | 7 cut(s) | 602, 2077, 2267, 2371, 2447, 2677, 3418 |
| BssNI | GRCGYC | 1 cut(s) | 3401 |
| BssSI | CACGAG | 1 cut(s) | 3066 |
| BssT1I | CCWWGG | 6 cut(s) | 9, 27, 2163, 2314, 2432, 3467 |
| Bst2BI | CACGAG | 1 cut(s) | 3066 |
| Bst6I | CTCTTC | 9 cut(s) | 237, 416, 741, 1410, 1957, 1988, 2922, 3287, 3292 |
| BstACI | GRCGYC | 1 cut(s) | 3401 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1535 |
| BstAUI | TGTACA | 1 cut(s) | 1225 |
| BstC8I | GCNNGC | 6 cut(s) | 1029, 1536, 2853, 2875, 3495, 3581 |
| BstDSI | CCRYGG | 3 cut(s) | 27, 2432, 3467 |
| BstFNI | CGCG | 1 cut(s) | 144 |
| BstHHI | GCGC | 4 cut(s) | 69, 144, 340, 1057 |
| BstMAI | GTCTC | 4 cut(s) | 163, 825, 2518, 3368 |
| BstMCI | CGRYCG | 3 cut(s) | 102, 770, 1186 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 118, 148, 979, 1526, 1535, 2412, 3237, 3337, 3670 |
| BstNSI | RCATGY | 1 cut(s) | 2426 |
| BstSFI | CTRYAG | 3 cut(s) | 2214, 2401, 3438 |
| BstUI | CGCG | 1 cut(s) | 144 |
| BstV1I | GCAGC | 7 cut(s) | 854, 1252, 1643, 1796, 2200, 2228, 3452 |
| BstV2I | GAAGAC | 6 cut(s) | 1347, 1481, 1925, 3032, 3064, 3445 |
| BstX2I | RGATCY | 7 cut(s) | 383, 431, 530, 2395, 3271, 3282, 3463 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2980 |
| BstYI | RGATCY | 7 cut(s) | 383, 431, 530, 2395, 3271, 3282, 3463 |
| Bsu15I | ATCGAT | 3 cut(s) | 261, 278, 1386 |
| BsuI | GTATCC | 1 cut(s) | 2954 |
| BsuTUI | ATCGAT | 3 cut(s) | 261, 278, 1386 |
| BtgI | CCRYGG | 3 cut(s) | 27, 2432, 3467 |
| BtgZI | GCGATG | 4 cut(s) | 317, 1919, 2328, 3497 |
| BtsI | GCAGTG | 1 cut(s) | 2762 |
| BtsIMutI | CAGTG | 5 cut(s) | 2084, 2528, 2762, 3260, 3627 |
| Cac8I | GCNNGC | 6 cut(s) | 1029, 1536, 2853, 2875, 3495, 3581 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2111, 2633, 3227 |
| CciI | TCATGA | 2 cut(s) | 649, 2781 |
| CfoI | GCGC | 4 cut(s) | 69, 144, 340, 1057 |
| Cfr13I | GGNCC | 3 cut(s) | 2310, 2574, 3071 |
| ClaI | ATCGAT | 3 cut(s) | 261, 278, 1386 |
| CsiI | ACCWGGT | 2 cut(s) | 1139, 1954 |
| Csp6I | GTAC | 3 cut(s) | 371, 1226, 2177 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 972, 1007, 2517, 2552 |
| CviQI | GTAC | 3 cut(s) | 371, 1226, 2177 |
| DraIII | CACNNNGTG | 1 cut(s) | 3014 |
| EaeI | YGGCCR | 2 cut(s) | 119, 721 |
| Eam1104I | CTCTTC | 9 cut(s) | 237, 416, 741, 1410, 1957, 1988, 2922, 3287, 3292 |
| EarI | CTCTTC | 9 cut(s) | 237, 416, 741, 1410, 1957, 1988, 2922, 3287, 3292 |
| Ecl136II | GAGCTC | 2 cut(s) | 3623, 3664 |
| Eco130I | CCWWGG | 6 cut(s) | 9, 27, 2163, 2314, 2432, 3467 |
| Eco147I | AGGCCT | 1 cut(s) | 2473 |
| Eco24I | GRGCYC | 4 cut(s) | 91, 1665, 3625, 3666 |
| Eco31I | GGTCTC | 3 cut(s) | 825, 2518, 3368 |
| Eco47I | GGWCC | 2 cut(s) | 2310, 3071 |
| Eco53kI | GAGCTC | 2 cut(s) | 3623, 3664 |
| Eco57I | CTGAAG | 3 cut(s) | 291, 545, 1593 |
| Eco88I | CYCGRG | 1 cut(s) | 3046 |
| EcoICRI | GAGCTC | 2 cut(s) | 3623, 3664 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2310 |
| EcoRI | GAATTC | 2 cut(s) | 33, 3507 |
| EcoT14I | CCWWGG | 6 cut(s) | 9, 27, 2163, 2314, 2432, 3467 |
| EcoT38I | GRGCYC | 4 cut(s) | 91, 1665, 3625, 3666 |
| ErhI | CCWWGG | 6 cut(s) | 9, 27, 2163, 2314, 2432, 3467 |
| Esp3I | CGTCTC | 1 cut(s) | 163 |
| FaqI | GGGAC | 8 cut(s) | 929, 1016, 1054, 1923, 2043, 2145, 2891, 2955 |
| FauNDI | CATATG | 2 cut(s) | 2200, 2975 |
| FbaI | TGATCA | 2 cut(s) | 105, 735 |
| FblI | GTMKAC | 1 cut(s) | 1086 |
| Fnu4HI | GCNGC | 9 cut(s) | 284, 843, 1266, 1632, 1785, 2214, 2217, 3136, 3441 |
| FriOI | GRGCYC | 4 cut(s) | 91, 1665, 3625, 3666 |
| Fsp4HI | GCNGC | 9 cut(s) | 284, 843, 1266, 1632, 1785, 2214, 2217, 3136, 3441 |
| FspBI | CTAG | 6 cut(s) | 1367, 1895, 1946, 2157, 2874, 3651 |
| GlaI | GCGC | 4 cut(s) | 68, 143, 339, 1056 |
| GluI | GCNGC | 9 cut(s) | 284, 843, 1266, 1632, 1785, 2214, 2217, 3136, 3441 |
| GsaI | CCCAGC | 3 cut(s) | 1783, 2913, 3055 |
| GsuI | CTGGAG | 3 cut(s) | 585, 1194, 1446 |
| HapII | CCGG | 3 cut(s) | 84, 122, 3618 |
| HhaI | GCGC | 4 cut(s) | 69, 144, 340, 1057 |
| Hin1I | GRCGYC | 1 cut(s) | 3401 |
| Hin6I | GCGC | 4 cut(s) | 67, 142, 338, 1055 |
| HinP1I | GCGC | 4 cut(s) | 67, 142, 338, 1055 |
| HincII | GTYRAC | 4 cut(s) | 1102, 1348, 2260, 3399 |
| HindII | GTYRAC | 4 cut(s) | 1102, 1348, 2260, 3399 |
| HindIII | AAGCTT | 3 cut(s) | 149, 671, 2849 |
| HpaI | GTTAAC | 1 cut(s) | 1102 |
| HpaII | CCGG | 3 cut(s) | 84, 122, 3618 |
| Hpy99I | CGWCG | 4 cut(s) | 181, 184, 631, 1346 |
| HpyCH4IV | ACGT | 6 cut(s) | 629, 1344, 1486, 1504, 3401, 3450 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 118, 148, 979, 1526, 1535, 2412, 3237, 3337, 3670 |
| HpySE526I | ACGT | 6 cut(s) | 629, 1344, 1486, 1504, 3401, 3450 |
| Hsp92I | GRCGYC | 1 cut(s) | 3401 |
| HspAI | GCGC | 4 cut(s) | 67, 142, 338, 1055 |
| Ksp22I | TGATCA | 2 cut(s) | 105, 735 |
| KspAI | GTTAAC | 1 cut(s) | 1102 |
| LmnI | GCTCC | 9 cut(s) | 254, 604, 616, 1525, 1660, 3205, 3490, 3620, 3661 |
| Lsp1109I | GCAGC | 7 cut(s) | 854, 1252, 1643, 1796, 2200, 2228, 3452 |
| LweI | GCATC | 7 cut(s) | 270, 1278, 1360, 1891, 2620, 2872, 3452 |
| MabI | ACCWGGT | 2 cut(s) | 1139, 1954 |
| MaeI | CTAG | 6 cut(s) | 1367, 1895, 1946, 2157, 2874, 3651 |
| MaeII | ACGT | 6 cut(s) | 629, 1344, 1486, 1504, 3401, 3450 |
| MaeIII | GTNAC | 2 cut(s) | 1048, 3535 |
| MfeI | CAATTG | 1 cut(s) | 1932 |
| MflI | RGATCY | 7 cut(s) | 383, 431, 530, 2395, 3271, 3282, 3463 |
| MhlI | GDGCHC | 8 cut(s) | 91, 251, 814, 1665, 2323, 3019, 3625, 3666 |
| MlyI | GAGTC | 4 cut(s) | 140, 575, 1613, 2794 |
| MmeI | TCCRAC | 7 cut(s) | 361, 1015, 1459, 1886, 2618, 2768, 3068 |
| MroXI | GAANNNNTTC | 6 cut(s) | 150, 558, 1506, 1555, 1832, 3365 |
| MseI | TTAA | 9 cut(s) | 636, 885, 969, 1101, 1242, 2072, 2298, 2462, 3434 |
| MslI | CAYNNNNRTG | 4 cut(s) | 47, 1676, 2139, 2718 |
| MspA1I | CMGCKG | 2 cut(s) | 845, 1634 |
| MspI | CCGG | 3 cut(s) | 84, 122, 3618 |
| MunI | CAATTG | 1 cut(s) | 1932 |
| Mva1269I | GAATGC | 2 cut(s) | 827, 844 |
| MvnI | CGCG | 1 cut(s) | 144 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 118, 148, 979, 1526, 1535, 2412, 3237, 3337, 3670 |
| NciI | CCSGG | 1 cut(s) | 85 |
| NcoI | CCATGG | 3 cut(s) | 27, 2432, 3467 |
| NdeI | CATATG | 2 cut(s) | 2200, 2975 |
| NheI | GCTAGC | 1 cut(s) | 2873 |
| NlaIV | GGNNCC | 9 cut(s) | 195, 315, 471, 501, 618, 1558, 1662, 2312, 3465 |
| NmeAIII | GCCGAG | 2 cut(s) | 749, 2939 |
| NmuCI | GTSAC | 1 cut(s) | 3535 |
| NspI | RCATGY | 1 cut(s) | 2426 |
| OliI | CACNNNNGTG | 1 cut(s) | 2139 |
| PaeR7I | CTCGAG | 1 cut(s) | 3046 |
| PagI | TCATGA | 2 cut(s) | 649, 2781 |
| PceI | AGGCCT | 1 cut(s) | 2473 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 515 |
| PctI | GAATGC | 2 cut(s) | 827, 844 |
| PdmI | GAANNNNTTC | 6 cut(s) | 150, 558, 1506, 1555, 1832, 3365 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3068 |
| PfoI | TCCNGGA | 1 cut(s) | 858 |
| PkrI | GCNGC | 9 cut(s) | 285, 844, 1267, 1633, 1786, 2215, 2218, 3137, 3442 |
| PleI | GAGTC | 4 cut(s) | 139, 574, 1612, 2793 |
| PpsI | GAGTC | 4 cut(s) | 139, 574, 1612, 2793 |
| PpuMI | RGGWCCY | 1 cut(s) | 2310 |
| PshBI | ATTAAT | 1 cut(s) | 2462 |
| Psp124BI | GAGCTC | 2 cut(s) | 3625, 3666 |
| Psp5II | RGGWCCY | 1 cut(s) | 2310 |
| PspFI | CCCAGC | 3 cut(s) | 1779, 2909, 3051 |
| PspN4I | GGNNCC | 9 cut(s) | 195, 315, 471, 501, 618, 1558, 1662, 2312, 3465 |
| PspPI | GGNCC | 3 cut(s) | 2310, 2574, 3071 |
| PspPPI | RGGWCCY | 1 cut(s) | 2310 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3567, 3599 |
| PstI | CTGCAG | 2 cut(s) | 2218, 3442 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2111, 2633, 3227 |
| PsuI | RGATCY | 7 cut(s) | 383, 431, 530, 2395, 3271, 3282, 3463 |
| PvuII | CAGCTG | 1 cut(s) | 845 |
| RsaI | GTAC | 3 cut(s) | 372, 1227, 2178 |
| RsaNI | GTAC | 3 cut(s) | 371, 1226, 2177 |
| RseI | CAYNNNNRTG | 4 cut(s) | 47, 1676, 2139, 2718 |
| SacI | GAGCTC | 2 cut(s) | 3625, 3666 |
| SaqAI | TTAA | 9 cut(s) | 636, 885, 969, 1101, 1242, 2072, 2298, 2462, 3434 |
| SatI | GCNGC | 9 cut(s) | 284, 843, 1266, 1632, 1785, 2214, 2217, 3136, 3441 |
| Sau96I | GGNCC | 3 cut(s) | 2310, 2574, 3071 |
| SchI | GAGTC | 4 cut(s) | 140, 575, 1613, 2794 |
| SduI | GDGCHC | 8 cut(s) | 91, 251, 814, 1665, 2323, 3019, 3625, 3666 |
| SexAI | ACCWGGT | 2 cut(s) | 1139, 1954 |
| SfaNI | GCATC | 7 cut(s) | 270, 1278, 1360, 1891, 2620, 2872, 3452 |
| SfcI | CTRYAG | 3 cut(s) | 2214, 2401, 3438 |
| Sfr274I | CTCGAG | 1 cut(s) | 3046 |
| SinI | GGWCC | 2 cut(s) | 2310, 3071 |
| SlaI | CTCGAG | 1 cut(s) | 3046 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 47, 1676, 2139, 2718 |
| SmlI | CTYRAG | 2 cut(s) | 1272, 3046 |
| SmoI | CTYRAG | 2 cut(s) | 1272, 3046 |
| SpeI | ACTAGT | 1 cut(s) | 2156 |
| SseBI | AGGCCT | 1 cut(s) | 2473 |
| SsiI | CCGC | 9 cut(s) | 283, 350, 497, 825, 1031, 1634, 3136, 3417, 3482 |
| SspI | AATATT | 2 cut(s) | 1498, 2862 |
| SspMI | CTAG | 6 cut(s) | 1367, 1895, 1946, 2157, 2874, 3651 |
| SstI | GAGCTC | 2 cut(s) | 3625, 3666 |
| StuI | AGGCCT | 1 cut(s) | 2473 |
| StyI | CCWWGG | 6 cut(s) | 9, 27, 2163, 2314, 2432, 3467 |
| TaiI | ACGT | 6 cut(s) | 632, 1347, 1489, 1507, 3404, 3453 |
| TaqII | GACCGA | 2 cut(s) | 756, 1172 |
| TatI | WGTACW | 2 cut(s) | 1225, 2176 |
| TauI | GCSGC | 2 cut(s) | 286, 3138 |
| Tru1I | TTAA | 9 cut(s) | 636, 885, 969, 1101, 1242, 2072, 2298, 2462, 3434 |
| Tru9I | TTAA | 9 cut(s) | 636, 885, 969, 1101, 1242, 2072, 2298, 2462, 3434 |
| TscAI | CASTG | 5 cut(s) | 2084, 2535, 2762, 3260, 3634 |
| TseFI | GTSAC | 1 cut(s) | 3535 |
| TseI | GCWGC | 7 cut(s) | 842, 1265, 1631, 1784, 2213, 2216, 3440 |
| Tsp45I | GTSAC | 1 cut(s) | 3535 |
| TspGWI | ACGGA | 2 cut(s) | 1028, 2936 |
| TspRI | CASTG | 5 cut(s) | 2084, 2535, 2762, 3260, 3634 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3068 |
| VpaK11BI | GGWCC | 2 cut(s) | 2310, 3071 |
| VspI | ATTAAT | 1 cut(s) | 2462 |
| XapI | RAATTY | 9 cut(s) | 21, 33, 762, 794, 988, 1123, 1856, 3430, 3507 |
| XceI | RCATGY | 1 cut(s) | 2426 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2439 |
| XhoI | CTCGAG | 1 cut(s) | 3046 |
| XmiI | GTMKAC | 1 cut(s) | 1086 |
| XmnI | GAANNNNTTC | 6 cut(s) | 150, 558, 1506, 1555, 1832, 3365 |
| XspI | CTAG | 6 cut(s) | 1367, 1895, 1946, 2157, 2874, 3651 |
| ZraI | GACGTC | 1 cut(s) | 3402 |