SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1078 |
| Acc36I | ACCTGC | 1 cut(s) | 1078 |
| AccI | GTMKAC | 2 cut(s) | 693, 821 |
| AccII | CGCG | 1 cut(s) | 17 |
| AciI | CCGC | 3 cut(s) | 17, 401, 601 |
| AclI | AACGTT | 1 cut(s) | 1270 |
| AclWI | GGATC | 1 cut(s) | 1203 |
| AcsI | RAATTY | 5 cut(s) | 74, 334, 469, 620, 1095 |
| AcuI | CTGAAG | 2 cut(s) | 279, 1284 |
| AcyI | GRCGYC | 1 cut(s) | 1677 |
| AfaI | GTAC | 1 cut(s) | 1479 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 96, 1091, 1164, 1242 |
| AflII | CTTAAG | 1 cut(s) | 1583 |
| AflIII | ACRYGT | 2 cut(s) | 696, 1035 |
| AgsI | TTSAA | 6 cut(s) | 745, 904, 1033, 1276, 1509, 1540 |
| AhlI | ACTAGT | 1 cut(s) | 410 |
| AjnI | CCWGG | 1 cut(s) | 1455 |
| AluBI | AGCT | 8 cut(s) | 34, 477, 791, 914, 1171, 1262, 1490, 1523 |
| AluI | AGCT | 8 cut(s) | 34, 477, 791, 914, 1171, 1262, 1490, 1523 |
| Alw26I | GTCTC | 3 cut(s) | 313, 831, 1554 |
| AlwI | GGATC | 1 cut(s) | 1203 |
| AoxI | GGCC | 2 cut(s) | 83, 990 |
| ApeKI | GCWGC | 2 cut(s) | 884, 1523 |
| ApoI | RAATTY | 5 cut(s) | 74, 334, 469, 620, 1095 |
| AseI | ATTAAT | 1 cut(s) | 1668 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1037 |
| AspLEI | GCGC | 1 cut(s) | 616 |
| AspS9I | GGNCC | 1 cut(s) | 146 |
| AsuHPI | GGTGA | 2 cut(s) | 208, 289 |
| AsuII | TTCGAA | 1 cut(s) | 132 |
| AvaII | GGWCC | 1 cut(s) | 146 |
| BbsI | GAAGAC | 3 cut(s) | 693, 852, 1130 |
| BbvCI | CCTCAGC | 1 cut(s) | 1527 |
| BbvI | GCAGC | 2 cut(s) | 871, 1510 |
| BccI | CCATC | 6 cut(s) | 46, 338, 1170, 1364, 1478, 1554 |
| BceAI | ACGGC | 2 cut(s) | 40, 98 |
| BciT130I | CCWGG | 1 cut(s) | 1457 |
| BclI | TGATCA | 2 cut(s) | 109, 217 |
| BcoDI | GTCTC | 3 cut(s) | 313, 831, 1554 |
| BcuI | ACTAGT | 1 cut(s) | 410 |
| BfaI | CTAG | 1 cut(s) | 411 |
| BfmI | CTRYAG | 3 cut(s) | 885, 1281, 1606 |
| BfrI | CTTAAG | 1 cut(s) | 1583 |
| BfuAI | ACCTGC | 1 cut(s) | 1078 |
| BglII | AGATCT | 1 cut(s) | 151 |
| BisI | GCNGC | 3 cut(s) | 18, 885, 1524 |
| BlsI | GCNGC | 3 cut(s) | 19, 886, 1525 |
| Bme1390I | CCNGG | 1 cut(s) | 1457 |
| Bme18I | GGWCC | 1 cut(s) | 146 |
| BmgT120I | GGNCC | 1 cut(s) | 146 |
| BmiI | GGNNCC | 1 cut(s) | 1576 |
| BmrFI | CCNGG | 1 cut(s) | 1457 |
| BmrI | ACTGGG | 1 cut(s) | 1127 |
| BmsI | GCATC | 4 cut(s) | 624, 880, 1096, 1282 |
| BmuI | ACTGGG | 1 cut(s) | 1127 |
| BpiI | GAAGAC | 3 cut(s) | 693, 852, 1130 |
| BpmI | CTGGAG | 1 cut(s) | 743 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1527 |
| Bpu14I | TTCGAA | 1 cut(s) | 132 |
| BsaBI | GATNNNNATC | 4 cut(s) | 65, 216, 723, 950 |
| BsaHI | GRCGYC | 1 cut(s) | 1677 |
| BsaI | GGTCTC | 1 cut(s) | 313 |
| BsaJI | CCNNGG | 2 cut(s) | 1158, 1637 |
| BsaWI | WCCGGW | 1 cut(s) | 240 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 900, 930 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 96, 1091, 1164, 1242 |
| Bse118I | RCCGGY | 1 cut(s) | 47 |
| Bse1I | ACTGG | 2 cut(s) | 1122, 1469 |
| Bse3DI | GCAATG | 3 cut(s) | 873, 1116, 1552 |
| Bse8I | GATNNNNATC | 4 cut(s) | 65, 216, 723, 950 |
| BseBI | CCWGG | 1 cut(s) | 1457 |
| BseDI | CCNNGG | 2 cut(s) | 1158, 1637 |
| BseGI | GGATG | 6 cut(s) | 349, 670, 790, 930, 976, 1353 |
| BseJI | GATNNNNATC | 4 cut(s) | 65, 216, 723, 950 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 96, 1091, 1164, 1242 |
| BseMI | GCAATG | 3 cut(s) | 873, 1116, 1552 |
| BseMII | CTCAG | 3 cut(s) | 324, 1056, 1518 |
| BseNI | ACTGG | 2 cut(s) | 1122, 1469 |
| BseRI | GAGGAG | 2 cut(s) | 1104, 1175 |
| BseXI | GCAGC | 2 cut(s) | 871, 1510 |
| BseYI | CCCAGC | 1 cut(s) | 984 |
| Bsh1236I | CGCG | 1 cut(s) | 17 |
| BshFI | GGCC | 2 cut(s) | 85, 992 |
| BsiSI | CCGG | 3 cut(s) | 48, 241, 365 |
| BslFI | GGGAC | 1 cut(s) | 1128 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 96, 1091, 1164, 1242 |
| BsmAI | GTCTC | 3 cut(s) | 313, 831, 1554 |
| BsmBI | CGTCTC | 2 cut(s) | 831, 1554 |
| BsmFI | GGGAC | 1 cut(s) | 1128 |
| BsnI | GGCC | 2 cut(s) | 85, 992 |
| Bso31I | GGTCTC | 1 cut(s) | 313 |
| Bsp119I | TTCGAA | 1 cut(s) | 132 |
| Bsp143I | GATC | 8 cut(s) | 22, 66, 109, 151, 189, 217, 515, 1208 |
| Bsp19I | CCATGG | 1 cut(s) | 1637 |
| BspACI | CCGC | 3 cut(s) | 17, 401, 601 |
| BspANI | GGCC | 2 cut(s) | 85, 992 |
| BspCNI | CTCAG | 3 cut(s) | 323, 1055, 1519 |
| BspFNI | CGCG | 1 cut(s) | 17 |
| BspHI | TCATGA | 2 cut(s) | 69, 1288 |
| BspLI | GGNNCC | 1 cut(s) | 1576 |
| BspMAI | CTGCAG | 1 cut(s) | 889 |
| BspMI | ACCTGC | 1 cut(s) | 1078 |
| BspPI | GGATC | 1 cut(s) | 1203 |
| BspT104I | TTCGAA | 1 cut(s) | 132 |
| BspTI | CTTAAG | 1 cut(s) | 1583 |
| BspTNI | GGTCTC | 1 cut(s) | 313 |
| BsrDI | GCAATG | 3 cut(s) | 873, 1116, 1552 |
| BsrFI | RCCGGY | 1 cut(s) | 47 |
| BsrI | ACTGG | 2 cut(s) | 1122, 1469 |
| BssAI | RCCGGY | 1 cut(s) | 47 |
| BssECI | CCNNGG | 2 cut(s) | 1158, 1637 |
| BssMI | GATC | 8 cut(s) | 22, 66, 109, 151, 189, 217, 515, 1208 |
| BssNAI | GTATAC | 1 cut(s) | 822 |
| BssNI | GRCGYC | 1 cut(s) | 1677 |
| BssT1I | CCWWGG | 1 cut(s) | 1637 |
| Bst1107I | GTATAC | 1 cut(s) | 822 |
| Bst2UI | CCWGG | 1 cut(s) | 1457 |
| Bst4CI | ACNGT | 5 cut(s) | 196, 429, 819, 998, 1129 |
| Bst6I | CTCTTC | 3 cut(s) | 935, 978, 1191 |
| BstACI | GRCGYC | 1 cut(s) | 1677 |
| BstAFI | CTTAAG | 1 cut(s) | 1583 |
| BstBI | TTCGAA | 1 cut(s) | 132 |
| BstC8I | GCNNGC | 2 cut(s) | 53, 895 |
| BstDEI | CTNAG | 3 cut(s) | 310, 1042, 1527 |
| BstDSI | CCRYGG | 1 cut(s) | 1637 |
| BstF5I | GGATG | 6 cut(s) | 349, 670, 790, 930, 976, 1353 |
| BstFNI | CGCG | 1 cut(s) | 17 |
| BstHHI | GCGC | 1 cut(s) | 616 |
| BstKTI | GATC | 8 cut(s) | 25, 69, 112, 154, 192, 220, 518, 1211 |
| BstMAI | GTCTC | 3 cut(s) | 313, 831, 1554 |
| BstMBI | GATC | 8 cut(s) | 22, 66, 109, 151, 189, 217, 515, 1208 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 325, 884, 890, 1520, 1532, 1633 |
| BstNI | CCWGG | 1 cut(s) | 1457 |
| BstNSI | RCATGY | 4 cut(s) | 323, 700, 1039, 1631 |
| BstSCI | CCNGG | 1 cut(s) | 1455 |
| BstSFI | CTRYAG | 3 cut(s) | 885, 1281, 1606 |
| BstUI | CGCG | 1 cut(s) | 17 |
| BstV1I | GCAGC | 2 cut(s) | 871, 1510 |
| BstV2I | GAAGAC | 3 cut(s) | 693, 852, 1130 |
| BstX2I | RGATCY | 2 cut(s) | 151, 1208 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 546 |
| BstYI | RGATCY | 2 cut(s) | 151, 1208 |
| BstZ17I | GTATAC | 1 cut(s) | 822 |
| BsuRI | GGCC | 2 cut(s) | 85, 992 |
| BtgI | CCRYGG | 1 cut(s) | 1637 |
| BtsCI | GGATG | 6 cut(s) | 349, 670, 790, 930, 976, 1353 |
| BtsI | GCAGTG | 1 cut(s) | 684 |
| BtsIMutI | CAGTG | 2 cut(s) | 318, 684 |
| BveI | ACCTGC | 1 cut(s) | 1078 |
| Cac8I | GCNNGC | 2 cut(s) | 53, 895 |
| CciI | TCATGA | 2 cut(s) | 69, 1288 |
| CfoI | GCGC | 1 cut(s) | 616 |
| Cfr10I | RCCGGY | 1 cut(s) | 47 |
| Cfr13I | GGNCC | 1 cut(s) | 146 |
| CsiI | ACCWGGT | 1 cut(s) | 1455 |
| Csp6I | GTAC | 1 cut(s) | 1478 |
| CviQI | GTAC | 1 cut(s) | 1478 |
| DdeI | CTNAG | 3 cut(s) | 310, 1042, 1527 |
| DpnI | GATC | 8 cut(s) | 24, 68, 111, 153, 191, 219, 517, 1210 |
| DpnII | GATC | 8 cut(s) | 22, 66, 109, 151, 189, 217, 515, 1208 |
| DraI | TTTAAA | 1 cut(s) | 867 |
| Eam1104I | CTCTTC | 3 cut(s) | 935, 978, 1191 |
| EarI | CTCTTC | 3 cut(s) | 935, 978, 1191 |
| Eco130I | CCWWGG | 1 cut(s) | 1637 |
| Eco147I | AGGCCT | 1 cut(s) | 992 |
| Eco31I | GGTCTC | 1 cut(s) | 313 |
| Eco32I | GATATC | 2 cut(s) | 952, 1603 |
| Eco47I | GGWCC | 1 cut(s) | 146 |
| Eco57I | CTGAAG | 2 cut(s) | 279, 1284 |
| EcoRII | CCWGG | 1 cut(s) | 1455 |
| EcoRV | GATATC | 2 cut(s) | 952, 1603 |
| EcoT14I | CCWWGG | 1 cut(s) | 1637 |
| ErhI | CCWWGG | 1 cut(s) | 1637 |
| Esp3I | CGTCTC | 2 cut(s) | 831, 1554 |
| FaqI | GGGAC | 1 cut(s) | 1128 |
| FbaI | TGATCA | 2 cut(s) | 109, 217 |
| FblI | GTMKAC | 2 cut(s) | 693, 821 |
| Fnu4HI | GCNGC | 3 cut(s) | 18, 885, 1524 |
| FokI | GGATG | 6 cut(s) | 356, 657, 797, 937, 963, 1360 |
| Fsp4HI | GCNGC | 3 cut(s) | 18, 885, 1524 |
| FspBI | CTAG | 1 cut(s) | 411 |
| GlaI | GCGC | 1 cut(s) | 615 |
| GluI | GCNGC | 3 cut(s) | 18, 885, 1524 |
| GsaI | CCCAGC | 1 cut(s) | 988 |
| GsuI | CTGGAG | 1 cut(s) | 743 |
| HaeIII | GGCC | 2 cut(s) | 85, 992 |
| HapII | CCGG | 3 cut(s) | 48, 241, 365 |
| HhaI | GCGC | 1 cut(s) | 616 |
| Hin1I | GRCGYC | 1 cut(s) | 1677 |
| Hin6I | GCGC | 1 cut(s) | 614 |
| HinP1I | GCGC | 1 cut(s) | 614 |
| HincII | GTYRAC | 3 cut(s) | 694, 1462, 1569 |
| HindII | GTYRAC | 3 cut(s) | 694, 1462, 1569 |
| HinfI | GANTC | 6 cut(s) | 61, 134, 575, 719, 857, 1313 |
| HpaII | CCGG | 3 cut(s) | 48, 241, 365 |
| HphI | GGTGA | 2 cut(s) | 208, 289 |
| Hpy166II | GTNNAC | 4 cut(s) | 694, 822, 1462, 1569 |
| Hpy8I | GTNNAC | 4 cut(s) | 694, 822, 1462, 1569 |
| Hpy99I | CGWCG | 3 cut(s) | 61, 84, 511 |
| HpyAV | CCTTC | 4 cut(s) | 96, 196, 277, 684 |
| HpyCH4III | ACNGT | 5 cut(s) | 196, 429, 819, 998, 1129 |
| HpyCH4IV | ACGT | 1 cut(s) | 1270 |
| HpyCH4V | TGCA | 9 cut(s) | 127, 637, 887, 897, 1073, 1109, 1152, 1295, 1627 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 325, 884, 890, 1520, 1532, 1633 |
| HpyF3I | CTNAG | 3 cut(s) | 310, 1042, 1527 |
| HpySE526I | ACGT | 1 cut(s) | 1270 |
| Hsp92I | GRCGYC | 1 cut(s) | 1677 |
| HspAI | GCGC | 1 cut(s) | 614 |
| Ksp22I | TGATCA | 2 cut(s) | 109, 217 |
| Kzo9I | GATC | 8 cut(s) | 22, 66, 109, 151, 189, 217, 515, 1208 |
| LmnI | GCTCC | 4 cut(s) | 39, 1176, 1487, 1641 |
| Lsp1109I | GCAGC | 2 cut(s) | 871, 1510 |
| LweI | GCATC | 4 cut(s) | 624, 880, 1096, 1282 |
| MabI | ACCWGGT | 1 cut(s) | 1455 |
| MaeI | CTAG | 1 cut(s) | 411 |
| MaeII | ACGT | 1 cut(s) | 1270 |
| MaeIII | GTNAC | 2 cut(s) | 43, 394 |
| MalI | GATC | 8 cut(s) | 24, 68, 111, 153, 191, 219, 517, 1210 |
| MboI | GATC | 8 cut(s) | 22, 66, 109, 151, 189, 217, 515, 1208 |
| MfeI | CAATTG | 1 cut(s) | 1137 |
| MflI | RGATCY | 2 cut(s) | 151, 1208 |
| MlyI | GAGTC | 2 cut(s) | 866, 1322 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1037 |
| MseI | TTAA | 8 cut(s) | 375, 467, 588, 866, 1299, 1500, 1584, 1668 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1431 |
| MspCI | CTTAAG | 1 cut(s) | 1583 |
| MspI | CCGG | 3 cut(s) | 48, 241, 365 |
| MspR9I | CCNGG | 1 cut(s) | 1457 |
| MunI | CAATTG | 1 cut(s) | 1137 |
| MvaI | CCWGG | 1 cut(s) | 1457 |
| MvnI | CGCG | 1 cut(s) | 17 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 325, 884, 890, 1520, 1532, 1633 |
| NcoI | CCATGG | 1 cut(s) | 1637 |
| NdeII | GATC | 8 cut(s) | 22, 66, 109, 151, 189, 217, 515, 1208 |
| NlaIV | GGNNCC | 1 cut(s) | 1576 |
| NspI | RCATGY | 4 cut(s) | 323, 700, 1039, 1631 |
| NspV | TTCGAA | 1 cut(s) | 132 |
| PagI | TCATGA | 2 cut(s) | 69, 1288 |
| PaqCI | CACCTGC | 1 cut(s) | 1078 |
| PceI | AGGCCT | 1 cut(s) | 992 |
| PciI | ACATGT | 2 cut(s) | 696, 1035 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1037 |
| PfeI | GAWTC | 4 cut(s) | 61, 134, 575, 719 |
| PkrI | GCNGC | 3 cut(s) | 19, 886, 1525 |
| PleI | GAGTC | 2 cut(s) | 865, 1321 |
| PpsI | GAGTC | 2 cut(s) | 865, 1321 |
| PscI | ACATGT | 2 cut(s) | 696, 1035 |
| PshBI | ATTAAT | 1 cut(s) | 1668 |
| Psp1406I | AACGTT | 1 cut(s) | 1270 |
| Psp6I | CCWGG | 1 cut(s) | 1455 |
| PspFI | CCCAGC | 1 cut(s) | 984 |
| PspGI | CCWGG | 1 cut(s) | 1455 |
| PspN4I | GGNNCC | 1 cut(s) | 1576 |
| PspPI | GGNCC | 1 cut(s) | 146 |
| PstI | CTGCAG | 1 cut(s) | 889 |
| PsuI | RGATCY | 2 cut(s) | 151, 1208 |
| RsaI | GTAC | 1 cut(s) | 1479 |
| RsaNI | GTAC | 1 cut(s) | 1478 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1431 |
| SalI | GTCGAC | 1 cut(s) | 692 |
| SaqAI | TTAA | 8 cut(s) | 375, 467, 588, 866, 1299, 1500, 1584, 1668 |
| SatI | GCNGC | 3 cut(s) | 18, 885, 1524 |
| Sau3AI | GATC | 8 cut(s) | 22, 66, 109, 151, 189, 217, 515, 1208 |
| Sau96I | GGNCC | 1 cut(s) | 146 |
| SchI | GAGTC | 2 cut(s) | 866, 1322 |
| ScrFI | CCNGG | 1 cut(s) | 1457 |
| SexAI | ACCWGGT | 1 cut(s) | 1455 |
| SfaNI | GCATC | 4 cut(s) | 624, 880, 1096, 1282 |
| SfcI | CTRYAG | 3 cut(s) | 885, 1281, 1606 |
| SfuI | TTCGAA | 1 cut(s) | 132 |
| SinI | GGWCC | 1 cut(s) | 146 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1431 |
| SmlI | CTYRAG | 1 cut(s) | 1583 |
| SmoI | CTYRAG | 1 cut(s) | 1583 |
| SpeI | ACTAGT | 1 cut(s) | 410 |
| SseBI | AGGCCT | 1 cut(s) | 992 |
| SsiI | CCGC | 3 cut(s) | 17, 401, 601 |
| SspMI | CTAG | 1 cut(s) | 411 |
| StuI | AGGCCT | 1 cut(s) | 992 |
| StyD4I | CCNGG | 1 cut(s) | 1455 |
| StyI | CCWWGG | 1 cut(s) | 1637 |
| TaaI | ACNGT | 5 cut(s) | 196, 429, 819, 998, 1129 |
| TaiI | ACGT | 1 cut(s) | 1273 |
| TaqI | TCGA | 7 cut(s) | 59, 132, 231, 407, 506, 693, 954 |
| TaqII | GACCGA | 1 cut(s) | 1172 |
| TauI | GCSGC | 1 cut(s) | 20 |
| TfiI | GAWTC | 4 cut(s) | 61, 134, 575, 719 |
| Tru1I | TTAA | 8 cut(s) | 375, 467, 588, 866, 1299, 1500, 1584, 1668 |
| Tru9I | TTAA | 8 cut(s) | 375, 467, 588, 866, 1299, 1500, 1584, 1668 |
| TscAI | CASTG | 2 cut(s) | 318, 691 |
| TseI | GCWGC | 2 cut(s) | 884, 1523 |
| TspDTI | ATGAA | 9 cut(s) | 86, 437, 437, 659, 693, 801, 965, 1012, 1677 |
| TspRI | CASTG | 2 cut(s) | 318, 691 |
| Vha464I | CTTAAG | 1 cut(s) | 1583 |
| VpaK11BI | GGWCC | 1 cut(s) | 146 |
| VspI | ATTAAT | 1 cut(s) | 1668 |
| XapI | RAATTY | 5 cut(s) | 74, 334, 469, 620, 1095 |
| XceI | RCATGY | 4 cut(s) | 323, 700, 1039, 1631 |
| XmiI | GTMKAC | 2 cut(s) | 693, 821 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1037 |
| XspI | CTAG | 1 cut(s) | 411 |