SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 23 |
| AatII | GACGTC | 1 cut(s) | 27 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 951 |
| AccII | CGCG | 3 cut(s) | 110, 180, 567 |
| AciI | CCGC | 7 cut(s) | 94, 110, 180, 332, 600, 618, 971 |
| AcoI | YGGCCR | 1 cut(s) | 1187 |
| AcsI | RAATTY | 6 cut(s) | 57, 69, 531, 739, 1182, 1205 |
| AcyI | GRCGYC | 1 cut(s) | 24 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 110, 111, 394, 951 |
| AgsI | TTSAA | 6 cut(s) | 487, 813, 1171, 1246, 1253, 1303 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1105 |
| AjnI | CCWGG | 4 cut(s) | 276, 357, 411, 678 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 885, 917 |
| AluBI | AGCT | 6 cut(s) | 345, 457, 467, 695, 882, 1016 |
| AluI | AGCT | 6 cut(s) | 345, 457, 467, 695, 882, 1016 |
| Alw21I | GWGCWC | 1 cut(s) | 591 |
| Alw26I | GTCTC | 5 cut(s) | 39, 149, 158, 342, 724 |
| AoxI | GGCC | 5 cut(s) | 426, 554, 662, 954, 1187 |
| ApeKI | GCWGC | 1 cut(s) | 1016 |
| ApoI | RAATTY | 6 cut(s) | 57, 69, 531, 739, 1182, 1205 |
| AseI | ATTAAT | 1 cut(s) | 1137 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 174, 285, 456 |
| AspLEI | GCGC | 2 cut(s) | 110, 657 |
| AspS9I | GGNCC | 4 cut(s) | 385, 554, 662, 954 |
| AsuC2I | CCSGG | 1 cut(s) | 105 |
| AsuHPI | GGTGA | 8 cut(s) | 94, 100, 455, 614, 694, 1067, 1109, 1201 |
| AsuII | TTCGAA | 1 cut(s) | 818 |
| AvaII | GGWCC | 1 cut(s) | 385 |
| BanII | GRGCYC | 4 cut(s) | 118, 258, 312, 482 |
| BbsI | GAAGAC | 1 cut(s) | 21 |
| Bbv12I | GWGCWC | 1 cut(s) | 591 |
| BbvI | GCAGC | 1 cut(s) | 1003 |
| BccI | CCATC | 4 cut(s) | 58, 70, 79, 629 |
| BciT130I | CCWGG | 4 cut(s) | 278, 359, 413, 680 |
| BciVI | GTATCC | 1 cut(s) | 1161 |
| BclI | TGATCA | 1 cut(s) | 243 |
| BcnI | CCSGG | 1 cut(s) | 105 |
| BcoDI | GTCTC | 5 cut(s) | 39, 149, 158, 342, 724 |
| BfaI | CTAG | 3 cut(s) | 584, 594, 1118 |
| BfuI | GTATCC | 1 cut(s) | 1161 |
| BglII | AGATCT | 1 cut(s) | 1219 |
| BisI | GCNGC | 2 cut(s) | 618, 1017 |
| BlpI | GCTNAGC | 1 cut(s) | 468 |
| BlsI | GCNGC | 2 cut(s) | 619, 1018 |
| Bme1390I | CCNGG | 5 cut(s) | 105, 278, 359, 413, 680 |
| Bme18I | GGWCC | 1 cut(s) | 385 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1105 |
| BmgT120I | GGNCC | 4 cut(s) | 385, 554, 662, 954 |
| BmiI | GGNNCC | 6 cut(s) | 255, 363, 399, 555, 663, 669 |
| BmrFI | CCNGG | 5 cut(s) | 105, 278, 359, 413, 680 |
| BmsI | GCATC | 2 cut(s) | 587, 1029 |
| BpiI | GAAGAC | 1 cut(s) | 21 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 223, 255 |
| BpmI | CTGGAG | 1 cut(s) | 443 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 468 |
| Bpu14I | TTCGAA | 1 cut(s) | 818 |
| BpuEI | CTTGAG | 2 cut(s) | 862, 1277 |
| BpuMI | CCSGG | 1 cut(s) | 105 |
| Bsa29I | ATCGAT | 1 cut(s) | 1338 |
| BsaHI | GRCGYC | 1 cut(s) | 24 |
| BsaI | GGTCTC | 2 cut(s) | 158, 724 |
| BsaJI | CCNNGG | 4 cut(s) | 129, 150, 411, 945 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 320, 350 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 110, 111, 394, 951 |
| BseBI | CCWGG | 4 cut(s) | 278, 359, 413, 680 |
| BseCI | ATCGAT | 1 cut(s) | 1338 |
| BseDI | CCNNGG | 4 cut(s) | 129, 150, 411, 945 |
| BseGI | GGATG | 1 cut(s) | 166 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 110, 111, 394, 951 |
| BseMII | CTCAG | 6 cut(s) | 332, 357, 423, 549, 552, 726 |
| BseRI | GAGGAG | 6 cut(s) | 53, 167, 332, 341, 449, 1148 |
| BseXI | GCAGC | 1 cut(s) | 1003 |
| BseYI | CCCAGC | 1 cut(s) | 550 |
| BsgI | GTGCAG | 2 cut(s) | 789, 1002 |
| Bsh1236I | CGCG | 3 cut(s) | 110, 180, 567 |
| Bsh1285I | CGRYCG | 1 cut(s) | 129 |
| BshFI | GGCC | 5 cut(s) | 428, 556, 664, 956, 1189 |
| BshVI | ATCGAT | 1 cut(s) | 1338 |
| BsiEI | CGRYCG | 1 cut(s) | 129 |
| BsiHKAI | GWGCWC | 1 cut(s) | 591 |
| BsiSI | CCGG | 2 cut(s) | 105, 665 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 110, 111, 394, 951 |
| BsmAI | GTCTC | 5 cut(s) | 39, 149, 158, 342, 724 |
| BsmBI | CGTCTC | 1 cut(s) | 149 |
| BsmI | GAATGC | 1 cut(s) | 630 |
| BsnI | GGCC | 5 cut(s) | 428, 556, 664, 956, 1189 |
| Bso31I | GGTCTC | 2 cut(s) | 158, 724 |
| Bsp119I | TTCGAA | 1 cut(s) | 818 |
| Bsp1286I | GDGCHC | 5 cut(s) | 118, 258, 312, 482, 591 |
| Bsp143I | GATC | 5 cut(s) | 243, 645, 1219, 1288, 1339 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 468 |
| Bsp19I | CCATGG | 1 cut(s) | 945 |
| BspACI | CCGC | 7 cut(s) | 94, 110, 180, 332, 600, 618, 971 |
| BspANI | GGCC | 5 cut(s) | 428, 556, 664, 956, 1189 |
| BspCNI | CTCAG | 6 cut(s) | 333, 358, 424, 550, 551, 727 |
| BspDI | ATCGAT | 1 cut(s) | 1338 |
| BspFNI | CGCG | 3 cut(s) | 110, 180, 567 |
| BspLI | GGNNCC | 6 cut(s) | 255, 363, 399, 555, 663, 669 |
| BspT104I | TTCGAA | 1 cut(s) | 818 |
| BspTNI | GGTCTC | 2 cut(s) | 158, 724 |
| BssECI | CCNNGG | 4 cut(s) | 129, 150, 411, 945 |
| BssMI | GATC | 5 cut(s) | 243, 645, 1219, 1288, 1339 |
| BssNI | GRCGYC | 1 cut(s) | 24 |
| BssT1I | CCWWGG | 1 cut(s) | 945 |
| Bst2UI | CCWGG | 4 cut(s) | 278, 359, 413, 680 |
| Bst4CI | ACNGT | 2 cut(s) | 130, 964 |
| Bst6I | CTCTTC | 3 cut(s) | 135, 489, 510 |
| BstACI | GRCGYC | 1 cut(s) | 24 |
| BstBI | TTCGAA | 1 cut(s) | 818 |
| BstC8I | GCNNGC | 1 cut(s) | 591 |
| BstDEI | CTNAG | 9 cut(s) | 341, 346, 366, 432, 468, 538, 558, 672, 735 |
| BstDSI | CCRYGG | 2 cut(s) | 129, 945 |
| BstEII | GGTNACC | 1 cut(s) | 1097 |
| BstF5I | GGATG | 1 cut(s) | 166 |
| BstFNI | CGCG | 3 cut(s) | 110, 180, 567 |
| BstHHI | GCGC | 2 cut(s) | 110, 657 |
| BstKTI | GATC | 5 cut(s) | 246, 648, 1222, 1291, 1342 |
| BstMAI | GTCTC | 5 cut(s) | 39, 149, 158, 342, 724 |
| BstMBI | GATC | 5 cut(s) | 243, 645, 1219, 1288, 1339 |
| BstMCI | CGRYCG | 1 cut(s) | 129 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 661, 775 |
| BstNI | CCWGG | 4 cut(s) | 278, 359, 413, 680 |
| BstNSI | RCATGY | 1 cut(s) | 35 |
| BstPI | GGTNACC | 1 cut(s) | 1097 |
| BstSCI | CCNGG | 5 cut(s) | 103, 276, 357, 411, 678 |
| BstUI | CGCG | 3 cut(s) | 110, 180, 567 |
| BstV1I | GCAGC | 1 cut(s) | 1003 |
| BstV2I | GAAGAC | 1 cut(s) | 21 |
| BstX2I | RGATCY | 1 cut(s) | 1219 |
| BstYI | RGATCY | 1 cut(s) | 1219 |
| Bsu15I | ATCGAT | 1 cut(s) | 1338 |
| BsuI | GTATCC | 1 cut(s) | 1161 |
| BsuRI | GGCC | 5 cut(s) | 428, 556, 664, 956, 1189 |
| BsuTUI | ATCGAT | 1 cut(s) | 1338 |
| BtgI | CCRYGG | 2 cut(s) | 129, 945 |
| BtsCI | GGATG | 1 cut(s) | 166 |
| BtsI | GCAGTG | 1 cut(s) | 801 |
| BtsIMutI | CAGTG | 1 cut(s) | 801 |
| Cac8I | GCNNGC | 1 cut(s) | 591 |
| CfoI | GCGC | 2 cut(s) | 110, 657 |
| Cfr13I | GGNCC | 4 cut(s) | 385, 554, 662, 954 |
| ClaI | ATCGAT | 1 cut(s) | 1338 |
| CseI | GACGC | 2 cut(s) | 758, 1015 |
| CviAII | CATG | 6 cut(s) | 32, 418, 473, 946, 1110, 1348 |
| DdeI | CTNAG | 9 cut(s) | 341, 346, 366, 432, 468, 538, 558, 672, 735 |
| DpnI | GATC | 5 cut(s) | 245, 647, 1221, 1290, 1341 |
| DpnII | GATC | 5 cut(s) | 243, 645, 1219, 1288, 1339 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 23 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1105 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 23 |
| EaeI | YGGCCR | 1 cut(s) | 1187 |
| Eam1104I | CTCTTC | 3 cut(s) | 135, 489, 510 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1105 |
| EarI | CTCTTC | 3 cut(s) | 135, 489, 510 |
| EciI | GGCGGA | 1 cut(s) | 347 |
| Eco130I | CCWWGG | 1 cut(s) | 945 |
| Eco147I | AGGCCT | 1 cut(s) | 428 |
| Eco24I | GRGCYC | 4 cut(s) | 118, 258, 312, 482 |
| Eco31I | GGTCTC | 2 cut(s) | 158, 724 |
| Eco47I | GGWCC | 1 cut(s) | 385 |
| Eco91I | GGTNACC | 1 cut(s) | 1097 |
| EcoO109I | RGGNCCY | 1 cut(s) | 554 |
| EcoO65I | GGTNACC | 1 cut(s) | 1097 |
| EcoRI | GAATTC | 2 cut(s) | 69, 1205 |
| EcoRII | CCWGG | 4 cut(s) | 276, 357, 411, 678 |
| EcoT14I | CCWWGG | 1 cut(s) | 945 |
| EcoT38I | GRGCYC | 4 cut(s) | 118, 258, 312, 482 |
| ErhI | CCWWGG | 1 cut(s) | 945 |
| Esp3I | CGTCTC | 1 cut(s) | 149 |
| FaeI | CATG | 6 cut(s) | 35, 421, 476, 949, 1113, 1351 |
| FatI | CATG | 6 cut(s) | 31, 417, 472, 945, 1109, 1347 |
| FauI | CCCGC | 2 cut(s) | 103, 173 |
| FbaI | TGATCA | 1 cut(s) | 243 |
| Fnu4HI | GCNGC | 2 cut(s) | 618, 1017 |
| FokI | GGATG | 1 cut(s) | 173 |
| FriOI | GRGCYC | 4 cut(s) | 118, 258, 312, 482 |
| Fsp4HI | GCNGC | 2 cut(s) | 618, 1017 |
| FspBI | CTAG | 3 cut(s) | 584, 594, 1118 |
| GlaI | GCGC | 2 cut(s) | 109, 656 |
| GluI | GCNGC | 2 cut(s) | 618, 1017 |
| GsaI | CCCAGC | 1 cut(s) | 554 |
| GsuI | CTGGAG | 1 cut(s) | 443 |
| HaeIII | GGCC | 5 cut(s) | 428, 556, 664, 956, 1189 |
| HapII | CCGG | 2 cut(s) | 105, 665 |
| HgaI | GACGC | 2 cut(s) | 758, 1015 |
| HhaI | GCGC | 2 cut(s) | 110, 657 |
| Hin1I | GRCGYC | 1 cut(s) | 24 |
| Hin1II | CATG | 6 cut(s) | 35, 421, 476, 949, 1113, 1351 |
| Hin6I | GCGC | 2 cut(s) | 108, 655 |
| HinP1I | GCGC | 2 cut(s) | 108, 655 |
| HincII | GTYRAC | 1 cut(s) | 838 |
| HindII | GTYRAC | 1 cut(s) | 838 |
| HindIII | AAGCTT | 1 cut(s) | 455 |
| HpaII | CCGG | 2 cut(s) | 105, 665 |
| HphI | GGTGA | 8 cut(s) | 94, 100, 455, 614, 694, 1067, 1109, 1201 |
| Hpy166II | GTNNAC | 1 cut(s) | 838 |
| Hpy8I | GTNNAC | 1 cut(s) | 838 |
| Hpy99I | CGWCG | 1 cut(s) | 29 |
| HpyAV | CCTTC | 3 cut(s) | 484, 682, 783 |
| HpyCH4III | ACNGT | 2 cut(s) | 130, 964 |
| HpyCH4IV | ACGT | 3 cut(s) | 24, 794, 1237 |
| HpyCH4V | TGCA | 8 cut(s) | 35, 630, 721, 806, 872, 1019, 1042, 1284 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 661, 775 |
| HpyF3I | CTNAG | 9 cut(s) | 341, 346, 366, 432, 468, 538, 558, 672, 735 |
| HpySE526I | ACGT | 3 cut(s) | 24, 794, 1237 |
| Hsp92I | GRCGYC | 1 cut(s) | 24 |
| Hsp92II | CATG | 6 cut(s) | 35, 421, 476, 949, 1113, 1351 |
| HspAI | GCGC | 2 cut(s) | 108, 655 |
| Ksp22I | TGATCA | 1 cut(s) | 243 |
| Kzo9I | GATC | 5 cut(s) | 243, 645, 1219, 1288, 1339 |
| LmnI | GCTCC | 5 cut(s) | 40, 253, 667, 700, 766 |
| Lsp1109I | GCAGC | 1 cut(s) | 1003 |
| LweI | GCATC | 2 cut(s) | 587, 1029 |
| MaeI | CTAG | 3 cut(s) | 584, 594, 1118 |
| MaeII | ACGT | 3 cut(s) | 24, 794, 1237 |
| MaeIII | GTNAC | 2 cut(s) | 602, 1097 |
| MalI | GATC | 5 cut(s) | 245, 647, 1221, 1290, 1341 |
| MboI | GATC | 5 cut(s) | 243, 645, 1219, 1288, 1339 |
| MboII | GAAGA | 7 cut(s) | 26, 152, 499, 506, 527, 697, 1229 |
| MfeI | CAATTG | 1 cut(s) | 625 |
| MflI | RGATCY | 1 cut(s) | 1219 |
| MhlI | GDGCHC | 5 cut(s) | 118, 258, 312, 482, 591 |
| MlyI | GAGTC | 5 cut(s) | 232, 329, 344, 379, 446 |
| MmeI | TCCRAC | 2 cut(s) | 7, 303 |
| MroXI | GAANNNNTTC | 3 cut(s) | 174, 285, 456 |
| MseI | TTAA | 3 cut(s) | 135, 204, 1137 |
| MspI | CCGG | 2 cut(s) | 105, 665 |
| MspR9I | CCNGG | 5 cut(s) | 105, 278, 359, 413, 680 |
| MunI | CAATTG | 1 cut(s) | 625 |
| Mva1269I | GAATGC | 1 cut(s) | 630 |
| MvaI | CCWGG | 4 cut(s) | 278, 359, 413, 680 |
| MvnI | CGCG | 3 cut(s) | 110, 180, 567 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 661, 775 |
| NciI | CCSGG | 1 cut(s) | 105 |
| NcoI | CCATGG | 1 cut(s) | 945 |
| NdeII | GATC | 5 cut(s) | 243, 645, 1219, 1288, 1339 |
| NlaIII | CATG | 6 cut(s) | 35, 421, 476, 949, 1113, 1351 |
| NlaIV | GGNNCC | 6 cut(s) | 255, 363, 399, 555, 663, 669 |
| NmeAIII | GCCGAG | 1 cut(s) | 378 |
| NmuCI | GTSAC | 2 cut(s) | 602, 1097 |
| NspI | RCATGY | 1 cut(s) | 35 |
| NspV | TTCGAA | 1 cut(s) | 818 |
| PceI | AGGCCT | 1 cut(s) | 428 |
| PctI | GAATGC | 1 cut(s) | 630 |
| PdmI | GAANNNNTTC | 3 cut(s) | 174, 285, 456 |
| PfeI | GAWTC | 6 cut(s) | 100, 292, 505, 906, 1226, 1319 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 951 |
| PkrI | GCNGC | 2 cut(s) | 619, 1018 |
| PleI | GAGTC | 5 cut(s) | 232, 328, 343, 378, 445 |
| PpsI | GAGTC | 5 cut(s) | 232, 328, 343, 378, 445 |
| PshBI | ATTAAT | 1 cut(s) | 1137 |
| Psp6I | CCWGG | 4 cut(s) | 276, 357, 411, 678 |
| PspEI | GGTNACC | 1 cut(s) | 1097 |
| PspFI | CCCAGC | 1 cut(s) | 550 |
| PspGI | CCWGG | 4 cut(s) | 276, 357, 411, 678 |
| PspN4I | GGNNCC | 6 cut(s) | 255, 363, 399, 555, 663, 669 |
| PspPI | GGNCC | 4 cut(s) | 385, 554, 662, 954 |
| PsuI | RGATCY | 1 cut(s) | 1219 |
| SaqAI | TTAA | 3 cut(s) | 135, 204, 1137 |
| SatI | GCNGC | 2 cut(s) | 618, 1017 |
| Sau3AI | GATC | 5 cut(s) | 243, 645, 1219, 1288, 1339 |
| Sau96I | GGNCC | 4 cut(s) | 385, 554, 662, 954 |
| SchI | GAGTC | 5 cut(s) | 232, 329, 344, 379, 446 |
| ScrFI | CCNGG | 5 cut(s) | 105, 278, 359, 413, 680 |
| SduI | GDGCHC | 5 cut(s) | 118, 258, 312, 482, 591 |
| SfaNI | GCATC | 2 cut(s) | 587, 1029 |
| SfuI | TTCGAA | 1 cut(s) | 818 |
| SinI | GGWCC | 1 cut(s) | 385 |
| SmlI | CTYRAG | 2 cut(s) | 877, 1292 |
| SmoI | CTYRAG | 2 cut(s) | 877, 1292 |
| SseBI | AGGCCT | 1 cut(s) | 428 |
| SsiI | CCGC | 7 cut(s) | 94, 110, 180, 332, 600, 618, 971 |
| SspI | AATATT | 1 cut(s) | 1249 |
| SspMI | CTAG | 3 cut(s) | 584, 594, 1118 |
| StuI | AGGCCT | 1 cut(s) | 428 |
| StyD4I | CCNGG | 5 cut(s) | 103, 276, 357, 411, 678 |
| StyI | CCWWGG | 1 cut(s) | 945 |
| TaaI | ACNGT | 2 cut(s) | 130, 964 |
| TaiI | ACGT | 3 cut(s) | 27, 797, 1240 |
| TaqI | TCGA | 9 cut(s) | 12, 125, 185, 508, 636, 818, 904, 911, 1338 |
| TaqII | GACCGA | 1 cut(s) | 182 |
| TauI | GCSGC | 1 cut(s) | 620 |
| TfiI | GAWTC | 6 cut(s) | 100, 292, 505, 906, 1226, 1319 |
| Tru1I | TTAA | 3 cut(s) | 135, 204, 1137 |
| Tru9I | TTAA | 3 cut(s) | 135, 204, 1137 |
| TscAI | CASTG | 1 cut(s) | 808 |
| TseFI | GTSAC | 2 cut(s) | 602, 1097 |
| TseI | GCWGC | 1 cut(s) | 1016 |
| Tsp45I | GTSAC | 2 cut(s) | 602, 1097 |
| TspDTI | ATGAA | 4 cut(s) | 842, 1134, 1267, 1336 |
| TspGWI | ACGGA | 2 cut(s) | 173, 1106 |
| TspRI | CASTG | 1 cut(s) | 808 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 951 |
| VpaK11BI | GGWCC | 1 cut(s) | 385 |
| VspI | ATTAAT | 1 cut(s) | 1137 |
| XapI | RAATTY | 6 cut(s) | 57, 69, 531, 739, 1182, 1205 |
| XceI | RCATGY | 1 cut(s) | 35 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 409 |
| XmnI | GAANNNNTTC | 3 cut(s) | 174, 285, 456 |
| XspI | CTAG | 3 cut(s) | 584, 594, 1118 |
| ZraI | GACGTC | 1 cut(s) | 25 |