SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DnaJ | PF00226 | 3 - 70 | 3.4e-21 | DnaJ domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 3 cut(s) | 198, 352, 401 |
| AciI | CCGC | 6 cut(s) | 80, 122, 135, 225, 289, 401 |
| AcyI | GRCGYC | 1 cut(s) | 405 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 381 |
| AflIII | ACRYGT | 1 cut(s) | 350 |
| AgsI | TTSAA | 3 cut(s) | 151, 464, 485 |
| AluBI | AGCT | 4 cut(s) | 76, 88, 321, 511 |
| AluI | AGCT | 4 cut(s) | 76, 88, 321, 511 |
| Alw26I | GTCTC | 1 cut(s) | 376 |
| AoxI | GGCC | 2 cut(s) | 156, 489 |
| ApeKI | GCWGC | 1 cut(s) | 88 |
| AspLEI | GCGC | 3 cut(s) | 198, 200, 401 |
| AspS9I | GGNCC | 1 cut(s) | 175 |
| AsuHPI | GGTGA | 4 cut(s) | 17, 94, 136, 337 |
| AvaII | GGWCC | 1 cut(s) | 175 |
| BanII | GRGCYC | 1 cut(s) | 388 |
| BbvI | GCAGC | 1 cut(s) | 75 |
| BccI | CCATC | 2 cut(s) | 414, 466 |
| BclI | TGATCA | 1 cut(s) | 7 |
| BcoDI | GTCTC | 1 cut(s) | 376 |
| BfmI | CTRYAG | 1 cut(s) | 512 |
| BisI | GCNGC | 1 cut(s) | 89 |
| BlsI | GCNGC | 1 cut(s) | 90 |
| Bme18I | GGWCC | 1 cut(s) | 175 |
| BmgT120I | GGNCC | 1 cut(s) | 175 |
| BmsI | GCATC | 1 cut(s) | 415 |
| BpmI | CTGGAG | 1 cut(s) | 301 |
| BsaAI | YACGTR | 1 cut(s) | 443 |
| BsaHI | GRCGYC | 1 cut(s) | 405 |
| BsaWI | WCCGGW | 1 cut(s) | 257 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 381 |
| BseGI | GGATG | 3 cut(s) | 221, 425, 430 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 381 |
| BsePI | GCGCGC | 1 cut(s) | 196 |
| BseRI | GAGGAG | 4 cut(s) | 235, 238, 241, 244 |
| BseXI | GCAGC | 1 cut(s) | 75 |
| BsgI | GTGCAG | 1 cut(s) | 74 |
| Bsh1236I | CGCG | 3 cut(s) | 198, 352, 401 |
| Bsh1285I | CGRYCG | 1 cut(s) | 190 |
| BshFI | GGCC | 2 cut(s) | 158, 491 |
| BsiEI | CGRYCG | 1 cut(s) | 190 |
| BsiSI | CCGG | 1 cut(s) | 258 |
| BslFI | GGGAC | 1 cut(s) | 143 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 381 |
| BsmAI | GTCTC | 1 cut(s) | 376 |
| BsmBI | CGTCTC | 1 cut(s) | 376 |
| BsmFI | GGGAC | 1 cut(s) | 143 |
| BsmI | GAATGC | 2 cut(s) | 43, 103 |
| BsnI | GGCC | 2 cut(s) | 158, 491 |
| Bsp1286I | GDGCHC | 1 cut(s) | 388 |
| Bsp143I | GATC | 2 cut(s) | 7, 187 |
| BspACI | CCGC | 6 cut(s) | 80, 122, 135, 225, 289, 401 |
| BspANI | GGCC | 2 cut(s) | 158, 491 |
| BspFNI | CGCG | 3 cut(s) | 198, 352, 401 |
| BssHII | GCGCGC | 1 cut(s) | 196 |
| BssMI | GATC | 2 cut(s) | 7, 187 |
| BssNI | GRCGYC | 1 cut(s) | 405 |
| Bst4CI | ACNGT | 3 cut(s) | 266, 272, 329 |
| BstACI | GRCGYC | 1 cut(s) | 405 |
| BstBAI | YACGTR | 1 cut(s) | 443 |
| BstC8I | GCNNGC | 7 cut(s) | 43, 78, 156, 194, 198, 354, 403 |
| BstDEI | CTNAG | 1 cut(s) | 117 |
| BstF5I | GGATG | 3 cut(s) | 221, 425, 430 |
| BstFNI | CGCG | 3 cut(s) | 198, 352, 401 |
| BstHHI | GCGC | 3 cut(s) | 198, 200, 401 |
| BstKTI | GATC | 2 cut(s) | 10, 190 |
| BstMAI | GTCTC | 1 cut(s) | 376 |
| BstMBI | GATC | 2 cut(s) | 7, 187 |
| BstMCI | CGRYCG | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 164 |
| BstSFI | CTRYAG | 1 cut(s) | 512 |
| BstSNI | TACGTA | 1 cut(s) | 443 |
| BstUI | CGCG | 3 cut(s) | 198, 352, 401 |
| BstV1I | GCAGC | 1 cut(s) | 75 |
| BsuRI | GGCC | 2 cut(s) | 158, 491 |
| BtgZI | GCGATG | 1 cut(s) | 485 |
| BtsCI | GGATG | 3 cut(s) | 221, 425, 430 |
| Cac8I | GCNNGC | 7 cut(s) | 43, 78, 156, 194, 198, 354, 403 |
| CfoI | GCGC | 3 cut(s) | 198, 200, 401 |
| Cfr13I | GGNCC | 1 cut(s) | 175 |
| CseI | GACGC | 1 cut(s) | 394 |
| CviJI | RGCY | 8 cut(s) | 76, 88, 158, 167, 321, 386, 491, 511 |
| CviKI_1 | RGCY | 8 cut(s) | 76, 88, 158, 167, 321, 386, 491, 511 |
| DdeI | CTNAG | 1 cut(s) | 117 |
| DpnI | GATC | 2 cut(s) | 9, 189 |
| DpnII | GATC | 2 cut(s) | 7, 187 |
| Eco105I | TACGTA | 1 cut(s) | 443 |
| Eco147I | AGGCCT | 1 cut(s) | 158 |
| Eco24I | GRGCYC | 1 cut(s) | 388 |
| Eco47I | GGWCC | 1 cut(s) | 175 |
| EcoO109I | RGGNCCY | 1 cut(s) | 175 |
| EcoT38I | GRGCYC | 1 cut(s) | 388 |
| Esp3I | CGTCTC | 1 cut(s) | 376 |
| FaiI | YATR | 6 cut(s) | 276, 297, 342, 416, 433, 501 |
| FaqI | GGGAC | 1 cut(s) | 143 |
| FauI | CCCGC | 1 cut(s) | 394 |
| FbaI | TGATCA | 1 cut(s) | 7 |
| Fnu4HI | GCNGC | 1 cut(s) | 89 |
| FokI | GGATG | 3 cut(s) | 208, 432, 437 |
| FriOI | GRGCYC | 1 cut(s) | 388 |
| Fsp4HI | GCNGC | 1 cut(s) | 89 |
| GlaI | GCGC | 3 cut(s) | 197, 199, 400 |
| GluI | GCNGC | 1 cut(s) | 89 |
| GsuI | CTGGAG | 1 cut(s) | 301 |
| HaeIII | GGCC | 2 cut(s) | 158, 491 |
| HapII | CCGG | 1 cut(s) | 258 |
| HgaI | GACGC | 1 cut(s) | 394 |
| HhaI | GCGC | 3 cut(s) | 198, 200, 401 |
| Hin1I | GRCGYC | 1 cut(s) | 405 |
| Hin6I | GCGC | 3 cut(s) | 196, 198, 399 |
| HinP1I | GCGC | 3 cut(s) | 196, 198, 399 |
| HinfI | GANTC | 2 cut(s) | 147, 476 |
| HpaII | CCGG | 1 cut(s) | 258 |
| HphI | GGTGA | 4 cut(s) | 17, 94, 136, 337 |
| Hpy188I | TCNGA | 4 cut(s) | 30, 146, 163, 215 |
| Hpy188III | TCNNGA | 2 cut(s) | 70, 237 |
| Hpy99I | CGWCG | 3 cut(s) | 188, 380, 410 |
| HpyAV | CCTTC | 2 cut(s) | 367, 371 |
| HpyCH4III | ACNGT | 3 cut(s) | 266, 272, 329 |
| HpyCH4IV | ACGT | 2 cut(s) | 369, 442 |
| HpyCH4V | TGCA | 1 cut(s) | 91 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 164 |
| HpyF3I | CTNAG | 1 cut(s) | 117 |
| HpySE526I | ACGT | 2 cut(s) | 369, 442 |
| Hsp92I | GRCGYC | 1 cut(s) | 405 |
| HspAI | GCGC | 3 cut(s) | 196, 198, 399 |
| Ksp22I | TGATCA | 1 cut(s) | 7 |
| Kzo9I | GATC | 2 cut(s) | 7, 187 |
| LpnPI | CCDG | 9 cut(s) | 55, 62, 108, 140, 158, 271, 331, 366, 435 |
| Lsp1109I | GCAGC | 1 cut(s) | 75 |
| LweI | GCATC | 1 cut(s) | 415 |
| MaeII | ACGT | 2 cut(s) | 369, 442 |
| MaeIII | GTNAC | 3 cut(s) | 260, 266, 343 |
| MalI | GATC | 2 cut(s) | 9, 189 |
| MboI | GATC | 2 cut(s) | 7, 187 |
| MboII | GAAGA | 4 cut(s) | 62, 105, 448, 476 |
| MhlI | GDGCHC | 1 cut(s) | 388 |
| MluCI | AATT | 4 cut(s) | 54, 208, 292, 445 |
| MluI | ACGCGT | 1 cut(s) | 350 |
| MseI | TTAA | 2 cut(s) | 57, 411 |
| MspI | CCGG | 1 cut(s) | 258 |
| Mva1269I | GAATGC | 2 cut(s) | 43, 103 |
| MvnI | CGCG | 3 cut(s) | 198, 352, 401 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 164 |
| NdeII | GATC | 2 cut(s) | 7, 187 |
| NmuCI | GTSAC | 1 cut(s) | 343 |
| PauI | GCGCGC | 1 cut(s) | 196 |
| PceI | AGGCCT | 1 cut(s) | 158 |
| PctI | GAATGC | 2 cut(s) | 43, 103 |
| PfeI | GAWTC | 2 cut(s) | 147, 476 |
| PkrI | GCNGC | 1 cut(s) | 90 |
| Ple19I | CGATCG | 1 cut(s) | 190 |
| Ppu21I | YACGTR | 1 cut(s) | 443 |
| PpuMI | RGGWCCY | 1 cut(s) | 175 |
| Psp5II | RGGWCCY | 1 cut(s) | 175 |
| PspPI | GGNCC | 1 cut(s) | 175 |
| PspPPI | RGGWCCY | 1 cut(s) | 175 |
| PteI | GCGCGC | 1 cut(s) | 196 |
| PvuI | CGATCG | 1 cut(s) | 190 |
| SaqAI | TTAA | 2 cut(s) | 57, 411 |
| SatI | GCNGC | 1 cut(s) | 89 |
| Sau3AI | GATC | 2 cut(s) | 7, 187 |
| Sau96I | GGNCC | 1 cut(s) | 175 |
| SduI | GDGCHC | 1 cut(s) | 388 |
| SfaNI | GCATC | 1 cut(s) | 415 |
| SfcI | CTRYAG | 1 cut(s) | 512 |
| SinI | GGWCC | 1 cut(s) | 175 |
| SnaBI | TACGTA | 1 cut(s) | 443 |
| Sse9I | AATT | 4 cut(s) | 54, 208, 292, 445 |
| SseBI | AGGCCT | 1 cut(s) | 158 |
| SsiI | CCGC | 6 cut(s) | 80, 122, 135, 225, 289, 401 |
| StuI | AGGCCT | 1 cut(s) | 158 |
| TaaI | ACNGT | 3 cut(s) | 266, 272, 329 |
| TaiI | ACGT | 2 cut(s) | 372, 445 |
| TaqI | TCGA | 1 cut(s) | 183 |
| TasI | AATT | 4 cut(s) | 54, 208, 292, 445 |
| TfiI | GAWTC | 2 cut(s) | 147, 476 |
| Tru1I | TTAA | 2 cut(s) | 57, 411 |
| Tru9I | TTAA | 2 cut(s) | 57, 411 |
| TseFI | GTSAC | 1 cut(s) | 343 |
| TseI | GCWGC | 1 cut(s) | 88 |
| Tsp45I | GTSAC | 1 cut(s) | 343 |
| TspGWI | ACGGA | 1 cut(s) | 364 |
| VpaK11BI | GGWCC | 1 cut(s) | 175 |