Rh4BG152800

Belongs to the cystatin family. Phytocystatin subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
27484388 .. 27499176
14789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG152800.1

Sequence Viewer

Length: 1878 bp
ATGGGTACTGAAGCTTCATTAAGACTTGTTAGTAAACTTATAATTCTATGCCTCATCTTTACTCTTTGGCAGCTTGGCTCTGAATTCAAATATCAGAGTACAGCTCAACCATTGCCCGATGAAGAAGTGAGAGCTCTTAATGAAATAGCATATAAGTTGGAGTTAAAAGGACGAATGTTCTATGAAGGCTCACTTTGCAATGGAAGCGGCGATGTTGGCGTCTACTGTGACTGCAGTTCCGGCACCATTTGCCACGTCACATATATTGAGCTAACTGCTAGGGGTTTGTCTGGAGTTATACCTGAAGAATTTGCCAATCTCACATATCTGCAAAGCTTGTTTCTCGATAATAATCAATTGACAGGTCCCATACCTGCTAGCTTGGGGAAATTATCTTTGCTCTACAGGCTGGATCTTTCCAATAATCAATTGACCGGGTCCATTCCAGCGAGTTTGGGAAATATGAAGTTTCAAGCATTATTGTTCGACCATCTCTTTCTGAATCCTTCTTCTCATCGCCGCGTGGATATTGAATTCACACTGGATCTTTCAGACAATCAATTGAGTGGATCCATACCAGCCACTTTAGGGAATTTGGCCCTCTCTTTGGTGATATCTGATCCAGAAGCCTACCGACTCGTCAAGCTTAAGCAATATGACAGTGCTTATGTAATCTCATCGTTCTACCTGAGTCTTTCAAACAATCAACTGACTGGGCCTATACCAAAGAGCTTAGGGAATTTGACTTTCGCCGATACTATTGATCTGCATGGCAACTTTCTCAACGCCTCTATACCAGCATCTTTGGGGGCGGTGACTTTTCTTAAGTCTCTCACGCTCGGATCCAACAGTATCACTGGGACATTACCAAAAAGTTTTGCCAACCTTACTAGTCTGGAAACATTTTCTGTAGCTGGTAACTATTTGTCTGGCCCTCTACCTGACTTCATAGCCAACTGGACTTCAAGCACTGAACTTTATCTCAACGGAAACAATTTCCACGGGAAGATACCTGCCGGAATTTTTAATTTATCATATCTAGAAATTTTGGCAATAAGTGATGTGGGAGACTCTCATTTCCAGTTCCCACCATCTACACAAGTGACGAGCAGCTTTCGTATTTTGATACTGAGAAACTGCTCGATCACAGGTCAAATTCCTTATTACATTGGAAATATGTCATCATTATCAAACCTAAACCTGAGCTTCAACAGCTTAACGGGTAGTATCCCAGATTCTTTGAAAAACTTAGATTTAAGTTACTTCCAGAGGAACGAGATTGGTCAAGGGGGTTTTGGAACCGTTTACAAGGCTTGTGATTTACAGCGAAAAGGAAAGCTGGTGGACTTGGTTGATAAAACCTTGTCTAATAAGTATGATGCAAAACAAGCCATCATCATCTTGAATTTAGCAGTAAAGTGCATCAATATATCGCCAACTCTGAGGCCTACTATGTCTGAAGTTGTGAGTGTTCTCGTTGGCGACAAAAAAATTGAGGAGATTTGTTCCTCTGCTTTGATTGAGGACATCAACGACCCCCACGTGAAGGAGATCGCGGAGTTCGCGGTGTCGGAGTACAACAAGAAATCCGGGAAGAAGCTGGAGTTACAGAGCTTGGTGAAGGGTGAGACTCAAGTCGTCCCCGGCGAGAATTACAAGCTCGTCATCGCCGTCACGGATAACTCATCGGTGGCCAAGTACGAGGGCGTTGTGTATGAGAGGATTTGGGAACATACTAGGGAATTGCTCTCCTTCAATAGTCACATTGCTCAAGTTGATTCCTCTGTTTCTATGGAAGTAACCTCAAGAGTATCCACATCATCCAATTTGATCAAAGGGGAAGATGAAACAGAACACATTTCTGAGTGTACCCCCTAG

Protein Analysis

625

Amino Acids

68.34

Weight (kDa)

5.18

Isoelectric Point (pI)

33.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 85 - 144 3.9e-07 Leucine rich repeat
LRR_8 PF13855 275 - 333 9.6e-07 Leucine rich repeat
SQAPI PF16845 507 - 586 4.5e-29 Aspartic acid proteinase inhibitor
Cystatin PF00031 507 - 572 3.6e-12 Cystatin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 41
Acc36I ACCTGC 2 cut(s) 382, 1021
AccB1I GGYRCC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 222
AccII CGCG 3 cut(s) 522, 1556, 1565
AciI CCGC 5 cut(s) 207, 520, 812, 1556, 1565
AclWI GGATC 7 cut(s) 420, 552, 564, 577, 614, 837, 850
AcoI YGGCCR 1 cut(s) 1692
AcsI RAATTY 9 cut(s) 83, 308, 533, 592, 739, 1020, 1044, 1155, 1405
AcuI CTGAAG 3 cut(s) 30, 324, 1479
AcvI CACGTG 1 cut(s) 1543
AcyI GRCGYC 1 cut(s) 219
AfaI GTAC 5 cut(s) 7, 100, 1577, 1700, 1870
AfiI CCNNNNNNNGG 3 cut(s) 588, 607, 1546
AflII CTTAAG 2 cut(s) 647, 824
AgsI TTSAA 9 cut(s) 88, 473, 533, 699, 966, 1210, 1243, 1405, 1756
AhlI ACTAGT 1 cut(s) 890
AjiI CACGTC 1 cut(s) 256
Alw21I GWGCWC 1 cut(s) 136
Alw26I GTCTC 3 cut(s) 834, 1062, 1622
AlwI GGATC 7 cut(s) 420, 552, 564, 577, 614, 837, 850
AoxI GGCC 5 cut(s) 597, 716, 931, 1445, 1692
ApeKI GCWGC 2 cut(s) 70, 1110
ApoI RAATTY 9 cut(s) 83, 308, 533, 592, 739, 1020, 1044, 1155, 1405
AspS9I GGNCC 5 cut(s) 365, 438, 598, 716, 932
AsuC2I CCSGG 3 cut(s) 436, 1591, 1644
AsuHPI GGTGA 4 cut(s) 622, 826, 1630, 1637
AsuNHI GCTAGC 1 cut(s) 377
AvaII GGWCC 2 cut(s) 365, 438
BalI TGGCCA 1 cut(s) 1694
BamHI GGATCC 2 cut(s) 569, 842
BanI GGYRCC 1 cut(s) 242
BanII GRGCYC 1 cut(s) 136
BarI GAAGNNNNNNTAC 1 cut(s) 30
BbrPI CACGTG 1 cut(s) 1543
Bbv12I GWGCWC 1 cut(s) 136
BbvI GCAGC 2 cut(s) 82, 1122
BccI CCATC 3 cut(s) 498, 1099, 1400
BceAI ACGGC 1 cut(s) 1655
BciVI GTATCC 2 cut(s) 1238, 1822
BclI TGATCA 1 cut(s) 1830
BcnI CCSGG 3 cut(s) 436, 1591, 1644
BcoDI GTCTC 3 cut(s) 834, 1062, 1622
BcuI ACTAGT 1 cut(s) 890
BfaI CTAG 6 cut(s) 279, 378, 891, 1040, 1737, 1876
BfmI CTRYAG 3 cut(s) 232, 403, 909
BfrI CTTAAG 2 cut(s) 647, 824
BfuAI ACCTGC 2 cut(s) 382, 1021
BfuI GTATCC 2 cut(s) 1238, 1822
BisI GCNGC 4 cut(s) 71, 208, 520, 1111
BlsI GCNGC 4 cut(s) 72, 209, 521, 1112
Bme1390I CCNGG 3 cut(s) 436, 1591, 1644
Bme18I GGWCC 2 cut(s) 365, 438
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 5 cut(s) 365, 438, 598, 716, 932
BmiI GGNNCC 6 cut(s) 244, 367, 439, 571, 844, 1300
BmrFI CCNGG 3 cut(s) 436, 1591, 1644
BmrI ACTGGG 2 cut(s) 723, 867
BmsI GCATC 3 cut(s) 809, 1369, 1431
BmtI GCTAGC 1 cut(s) 381
BmuI ACTGGG 2 cut(s) 723, 867
BoxI GACNNNNGTC 1 cut(s) 1634
BplI GAGNNNNNCTC 2 cut(s) 88, 120
BpmI CTGGAG 2 cut(s) 312, 1622
Bpu10I CCTNAGC 2 cut(s) 733, 1202
BpuEI CTTGAG 3 cut(s) 1617, 1755, 1789
BpuMI CCSGG 3 cut(s) 436, 1591, 1644
BsaAI YACGTR 1 cut(s) 1543
BsaBI GATNNNNATC 1 cut(s) 351
BsaHI GRCGYC 1 cut(s) 219
BsaJI CCNNGG 2 cut(s) 1000, 1642
Bsc4I CCNNNNNNNGG 3 cut(s) 588, 607, 1546
Bse1I ACTGG 5 cut(s) 546, 718, 862, 962, 1081
Bse3DI GCAATG 3 cut(s) 110, 205, 1764
Bse8I GATNNNNATC 1 cut(s) 351
BseDI CCNNGG 2 cut(s) 1000, 1642
BseGI GGATG 1 cut(s) 1820
BseJI GATNNNNATC 1 cut(s) 351
BseLI CCNNNNNNNGG 3 cut(s) 588, 607, 1546
BseMI GCAATG 3 cut(s) 110, 205, 1764
BseMII CTCAG 5 cut(s) 680, 1121, 1193, 1433, 1854
BseNI ACTGG 5 cut(s) 546, 718, 862, 962, 1081
BseRI GAGGAG 1 cut(s) 1511
BseXI GCAGC 2 cut(s) 82, 1122
Bsh1236I CGCG 3 cut(s) 522, 1556, 1565
BshFI GGCC 5 cut(s) 599, 718, 933, 1447, 1694
BshNI GGYRCC 1 cut(s) 242
BsiHKAI GWGCWC 1 cut(s) 136
BsiSI CCGG 5 cut(s) 240, 435, 1017, 1590, 1644
BslFI GGGAC 3 cut(s) 351, 874, 1625
BslI CCNNNNNNNGG 3 cut(s) 588, 607, 1546
BsmAI GTCTC 3 cut(s) 834, 1062, 1622
BsmFI GGGAC 3 cut(s) 351, 874, 1625
BsnI GGCC 5 cut(s) 599, 718, 933, 1447, 1694
Bsp1286I GDGCHC 1 cut(s) 136
Bsp143I GATC 9 cut(s) 412, 544, 569, 619, 763, 842, 1143, 1551, 1830
BspACI CCGC 5 cut(s) 207, 520, 812, 1556, 1565
BspANI GGCC 5 cut(s) 599, 718, 933, 1447, 1694
BspCNI CTCAG 5 cut(s) 681, 1122, 1194, 1434, 1855
BspFNI CGCG 3 cut(s) 522, 1556, 1565
BspLI GGNNCC 6 cut(s) 244, 367, 439, 571, 844, 1300
BspMAI CTGCAG 1 cut(s) 236
BspMI ACCTGC 2 cut(s) 382, 1021
BspOI GCTAGC 1 cut(s) 381
BspPI GGATC 7 cut(s) 420, 552, 564, 577, 614, 837, 850
BspT107I GGYRCC 1 cut(s) 242
BspTI CTTAAG 2 cut(s) 647, 824
BsrDI GCAATG 3 cut(s) 110, 205, 1764
BsrI ACTGG 5 cut(s) 546, 718, 862, 962, 1081
BssECI CCNNGG 2 cut(s) 1000, 1642
BssMI GATC 9 cut(s) 412, 544, 569, 619, 763, 842, 1143, 1551, 1830
BssNI GRCGYC 1 cut(s) 219
Bst4CI ACNGT 4 cut(s) 227, 662, 851, 1303
BstACI GRCGYC 1 cut(s) 219
BstAFI CTTAAG 2 cut(s) 647, 824
BstAPI GCANNNNNTGC 1 cut(s) 249
BstBAI YACGTR 1 cut(s) 1543
BstC8I GCNNGC 1 cut(s) 379
BstDEI CTNAG 7 cut(s) 689, 733, 1130, 1202, 1249, 1442, 1863
BstDSI CCRYGG 1 cut(s) 1000
BstF5I GGATG 1 cut(s) 1820
BstFNI CGCG 3 cut(s) 522, 1556, 1565
BstKTI GATC 9 cut(s) 415, 547, 572, 622, 766, 845, 1146, 1554, 1833
BstMAI GTCTC 3 cut(s) 834, 1062, 1622
BstMBI GATC 9 cut(s) 412, 544, 569, 619, 763, 842, 1143, 1551, 1830
BstMWI GCNNNNNNNGC 9 cut(s) 195, 204, 216, 240, 249, 406, 1212, 1388, 1562
BstPAI GACNNNNGTC 1 cut(s) 1634
BstSCI CCNGG 3 cut(s) 434, 1589, 1642
BstSFI CTRYAG 3 cut(s) 232, 403, 909
BstUI CGCG 3 cut(s) 522, 1556, 1565
BstV1I GCAGC 2 cut(s) 82, 1122
BstX2I RGATCY 4 cut(s) 412, 544, 569, 842
BstYI RGATCY 4 cut(s) 412, 544, 569, 842
BsuI GTATCC 2 cut(s) 1238, 1822
BsuRI GGCC 5 cut(s) 599, 718, 933, 1447, 1694
BtgI CCRYGG 1 cut(s) 1000
BtgZI GCGATG 3 cut(s) 225, 500, 1651
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 1 cut(s) 1820
BtsIMutI CAGTG 4 cut(s) 539, 667, 855, 969
BveI ACCTGC 2 cut(s) 382, 1021
Cac8I GCNNGC 1 cut(s) 379
Cfr13I GGNCC 5 cut(s) 365, 438, 598, 716, 932
CseI GACGC 1 cut(s) 208
Csp6I GTAC 5 cut(s) 6, 99, 1576, 1699, 1869
CviAII CATG 1 cut(s) 770
CviQI GTAC 5 cut(s) 6, 99, 1576, 1699, 1869
DdeI CTNAG 7 cut(s) 689, 733, 1130, 1202, 1249, 1442, 1863
DpnI GATC 9 cut(s) 414, 546, 571, 621, 765, 844, 1145, 1553, 1832
DpnII GATC 9 cut(s) 412, 544, 569, 619, 763, 842, 1143, 1551, 1830
EaeI YGGCCR 1 cut(s) 1692
Ecl136II GAGCTC 1 cut(s) 134
Eco147I AGGCCT 1 cut(s) 1447
Eco24I GRGCYC 1 cut(s) 136
Eco32I GATATC 1 cut(s) 615
Eco47I GGWCC 2 cut(s) 365, 438
Eco53kI GAGCTC 1 cut(s) 134
Eco57I CTGAAG 3 cut(s) 30, 324, 1479
Eco72I CACGTG 1 cut(s) 1543
EcoICRI GAGCTC 1 cut(s) 134
EcoO109I RGGNCCY 1 cut(s) 365
EcoRI GAATTC 2 cut(s) 83, 533
EcoRV GATATC 1 cut(s) 615
EcoT38I GRGCYC 1 cut(s) 136
FaeI CATG 1 cut(s) 773
FalI AAGNNNNNCTT 2 cut(s) 177, 209
FaqI GGGAC 3 cut(s) 351, 874, 1625
FatI CATG 1 cut(s) 769
FbaI TGATCA 1 cut(s) 1830
FblI GTMKAC 1 cut(s) 222
Fnu4HI GCNGC 4 cut(s) 71, 208, 520, 1111
FokI GGATG 1 cut(s) 1807
FriOI GRGCYC 1 cut(s) 136
Fsp4HI GCNGC 4 cut(s) 71, 208, 520, 1111
FspBI CTAG 6 cut(s) 279, 378, 891, 1040, 1737, 1876
GluI GCNGC 4 cut(s) 71, 208, 520, 1111
GsuI CTGGAG 2 cut(s) 312, 1622
HaeIII GGCC 5 cut(s) 599, 718, 933, 1447, 1694
HapII CCGG 5 cut(s) 240, 435, 1017, 1590, 1644
HgaI GACGC 1 cut(s) 208
Hin1I GRCGYC 1 cut(s) 219
Hin1II CATG 1 cut(s) 773
HindIII AAGCTT 3 cut(s) 12, 334, 644
HinfI GANTC 7 cut(s) 502, 636, 691, 1070, 1235, 1630, 1778
HpaII CCGG 5 cut(s) 240, 435, 1017, 1590, 1644
HphI GGTGA 4 cut(s) 622, 826, 1630, 1637
Hpy166II GTNNAC 5 cut(s) 35, 223, 1306, 1345, 1869
Hpy188III TCNNGA 8 cut(s) 291, 344, 623, 896, 1040, 1267, 1402, 1806
Hpy8I GTNNAC 5 cut(s) 35, 223, 1306, 1345, 1869
HpyAV CCTTC 5 cut(s) 179, 516, 1540, 1615, 1762
HpyCH4III ACNGT 4 cut(s) 227, 662, 851, 1303
HpyCH4IV ACGT 2 cut(s) 255, 1542
HpyCH4V TGCA 6 cut(s) 198, 234, 331, 769, 1382, 1422
HpyF10VI GCNNNNNNNGC 9 cut(s) 195, 204, 216, 240, 249, 406, 1212, 1388, 1562
HpyF3I CTNAG 7 cut(s) 689, 733, 1130, 1202, 1249, 1442, 1863
HpySE526I ACGT 2 cut(s) 255, 1542
Hsp92I GRCGYC 1 cut(s) 219
Hsp92II CATG 1 cut(s) 773
Ksp22I TGATCA 1 cut(s) 1830
Kzo9I GATC 9 cut(s) 412, 544, 569, 619, 763, 842, 1143, 1551, 1830
Lsp1109I GCAGC 2 cut(s) 82, 1122
LweI GCATC 3 cut(s) 809, 1369, 1431
MaeI CTAG 6 cut(s) 279, 378, 891, 1040, 1737, 1876
MaeII ACGT 2 cut(s) 255, 1542
MalI GATC 9 cut(s) 414, 546, 571, 621, 765, 844, 1145, 1553, 1832
MboI GATC 9 cut(s) 412, 544, 569, 619, 763, 842, 1143, 1551, 1830
MboII GAAGA 6 cut(s) 134, 317, 501, 1018, 1606, 1853
MfeI CAATTG 3 cut(s) 356, 428, 560
MflI RGATCY 4 cut(s) 412, 544, 569, 842
MhlI GDGCHC 1 cut(s) 136
MlsI TGGCCA 1 cut(s) 1694
MluNI TGGCCA 1 cut(s) 1694
MlyI GAGTC 4 cut(s) 630, 700, 1064, 1624
MmeI TCCRAC 3 cut(s) 138, 870, 1551
Mox20I TGGCCA 1 cut(s) 1694
MscI TGGCCA 1 cut(s) 1694
MseI TTAA 8 cut(s) 20, 138, 164, 648, 825, 1026, 1217, 1256
Msp20I TGGCCA 1 cut(s) 1694
MspCI CTTAAG 2 cut(s) 647, 824
MspI CCGG 5 cut(s) 240, 435, 1017, 1590, 1644
MspR9I CCNGG 3 cut(s) 436, 1591, 1644
MunI CAATTG 3 cut(s) 356, 428, 560
MvnI CGCG 3 cut(s) 522, 1556, 1565
MwoI GCNNNNNNNGC 9 cut(s) 195, 204, 216, 240, 249, 406, 1212, 1388, 1562
NciI CCSGG 3 cut(s) 436, 1591, 1644
NdeII GATC 9 cut(s) 412, 544, 569, 619, 763, 842, 1143, 1551, 1830
NheI GCTAGC 1 cut(s) 377
NlaIII CATG 1 cut(s) 773
NlaIV GGNNCC 6 cut(s) 244, 367, 439, 571, 844, 1300
NmuCI GTSAC 6 cut(s) 227, 256, 814, 1102, 1672, 1760
PceI AGGCCT 1 cut(s) 1447
PcsI WCGNNNNNNNCGW 3 cut(s) 1539, 1644, 1668
PfeI GAWTC 3 cut(s) 502, 1235, 1778
PflFI GACNNNGTC 1 cut(s) 436
PfoI TCCNGGA 1 cut(s) 1589
PkrI GCNGC 4 cut(s) 72, 209, 521, 1112
PleI GAGTC 4 cut(s) 630, 699, 1064, 1624
PmaCI CACGTG 1 cut(s) 1543
PmlI CACGTG 1 cut(s) 1543
PpsI GAGTC 4 cut(s) 630, 699, 1064, 1624
Ppu21I YACGTR 1 cut(s) 1543
PpuMI RGGWCCY 1 cut(s) 365
PshAI GACNNNNGTC 1 cut(s) 1634
PsiI TTATAA 1 cut(s) 41
Psp124BI GAGCTC 1 cut(s) 136
Psp5II RGGWCCY 1 cut(s) 365
PspCI CACGTG 1 cut(s) 1543
PspN4I GGNNCC 6 cut(s) 244, 367, 439, 571, 844, 1300
PspPI GGNCC 5 cut(s) 365, 438, 598, 716, 932
PspPPI RGGWCCY 1 cut(s) 365
PstI CTGCAG 1 cut(s) 236
PsuI RGATCY 4 cut(s) 412, 544, 569, 842
PsyI GACNNNGTC 1 cut(s) 436
RsaI GTAC 5 cut(s) 7, 100, 1577, 1700, 1870
RsaNI GTAC 5 cut(s) 6, 99, 1576, 1699, 1869
SacI GAGCTC 1 cut(s) 136
SaqAI TTAA 8 cut(s) 20, 138, 164, 648, 825, 1026, 1217, 1256
SatI GCNGC 4 cut(s) 71, 208, 520, 1111
Sau3AI GATC 9 cut(s) 412, 544, 569, 619, 763, 842, 1143, 1551, 1830
Sau96I GGNCC 5 cut(s) 365, 438, 598, 716, 932
SchI GAGTC 4 cut(s) 630, 700, 1064, 1624
ScrFI CCNGG 3 cut(s) 436, 1591, 1644
SduI GDGCHC 1 cut(s) 136
SfaNI GCATC 3 cut(s) 809, 1369, 1431
SfcI CTRYAG 3 cut(s) 232, 403, 909
SinI GGWCC 2 cut(s) 365, 438
SmlI CTYRAG 5 cut(s) 647, 824, 1632, 1770, 1804
SmoI CTYRAG 5 cut(s) 647, 824, 1632, 1770, 1804
SpeI ACTAGT 1 cut(s) 890
SseBI AGGCCT 1 cut(s) 1447
SsiI CCGC 5 cut(s) 207, 520, 812, 1556, 1565
SspMI CTAG 6 cut(s) 279, 378, 891, 1040, 1737, 1876
SstI GAGCTC 1 cut(s) 136
StuI AGGCCT 1 cut(s) 1447
StyD4I CCNGG 3 cut(s) 434, 1589, 1642
TaaI ACNGT 4 cut(s) 227, 662, 851, 1303
TaiI ACGT 2 cut(s) 258, 1545
TaqI TCGA 3 cut(s) 345, 486, 1142
TatI WGTACW 2 cut(s) 98, 1575
TauI GCSGC 2 cut(s) 210, 522
TfiI GAWTC 3 cut(s) 502, 1235, 1778
Tru1I TTAA 8 cut(s) 20, 138, 164, 648, 825, 1026, 1217, 1256
Tru9I TTAA 8 cut(s) 20, 138, 164, 648, 825, 1026, 1217, 1256
TscAI CASTG 4 cut(s) 546, 667, 862, 976
TseFI GTSAC 6 cut(s) 227, 256, 814, 1102, 1672, 1760
TseI GCWGC 2 cut(s) 70, 1110
Tsp45I GTSAC 6 cut(s) 227, 256, 814, 1102, 1672, 1760
TspDTI ATGAA 7 cut(s) 6, 135, 156, 198, 479, 937, 1860
TspGWI ACGGA 2 cut(s) 1002, 1691
TspRI CASTG 4 cut(s) 546, 667, 862, 976
Tth111I GACNNNGTC 1 cut(s) 436
Vha464I CTTAAG 2 cut(s) 647, 824
VpaK11BI GGWCC 2 cut(s) 365, 438
XapI RAATTY 9 cut(s) 83, 308, 533, 592, 739, 1020, 1044, 1155, 1405
XbaI TCTAGA 1 cut(s) 1039
XmiI GTMKAC 1 cut(s) 222
XspI CTAG 6 cut(s) 279, 378, 891, 1040, 1737, 1876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.