Rh5AG008700

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
579322 .. 588673
9352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG008700.1

Sequence Viewer

Length: 2151 bp
ATGAGCAAGCCTTCCCATAGAGTACTGCTTACGAAGCTTGTTTTATCCCTCAACTTTCTTTTTTGGCAGCTTGGGTCTGAACTCAAATTCCAGGCTAGAGCTTATGTAGTACTCCCAGCTGATGAAGTTTATACTCTCACAACCGTGATGAACAAGTTGGAGGTAAAGCAAGCGTCAGATATAAATTATACATCTTGCCAGAATATTGTCTACGGTATCACAATCGGCTGTAATTGTTACTACAAGAACAAAACGGAGTGCCATATCACAAAAATTTCCATGAATGACATAGCTTTAACTTCAGTTATACCAGAAGAAGTTGGTGACCTTCGGTACCTGTCATTCCTCGACCTATCCGGCGGTAAACTTTATGGCTCCATACCAGCTGCATTAGGGTACTTGCATCGTCTCCAAACCTTGGATCTATCAAGCAATCAACTGACCGGCTCAATACCAGACTTGGGGAGATTGCAAAACCTGCAGTCGCTAAGTCTACACCACAACTTGCTGGAAGGCACTATACCACCAACCTTGGGTTCACTGGTGAAGCTTGATAAACTGGATCTCCAGTCTAATAGGTTATTAGGCACAATTCCTGATGAGTTGGGAAATCTCGTCAATCTGACTACATTGGATATTTCTGAGAACATGCTCACTGGTCCGCTTCCCAAAACACTTGGAAATTTGAGTTCCCTCAGCTCCTTCTGGGCCGAAGCCAATTACTTGAATGATGAATTTCCGTACACTTATGGGAAGCTTACAAGTCTAAAATATTTAGACTTGAGTTTCAACAGCTTAACGGGTGGACTCCCAGAGTATATGAAATCGGATTTATTTTACGTGTCTTTTTCCACAAATATGCTTAATGGGACGATACCTGGTTGGATCCTTCAGGCAGTCCAAACTAGGATAGATCTATCATTCAATAATTTGTCAGCACTGGACTCTGGAGTACCAACAAACCCATATCTGAACTTGTTCGCTTGCTGCCGCAACTCCTCAGCCACTGAACCAGAAATGAGGGATCCATTAGAAATGATGAATACATACTGTCCGGGAAAGAAAAAAAAATACCATTCTTTGTTTATTAACTGTGGTGGTGGAGAAGCAACTGTTAATGGAATTACTTATGAGCAAGATAACGCCACAGCACCCTTCTTCACAAGTCCAAATAAAAACTGGGCGTATAGCTCTTCGTTAGAAGGATTTGGCGCCAATTCTAGTGATTACACGAAGAACATGACATGTGGAATTTCTGTTGCTGACGCACTTTTGTATGATAGAGCTCGTCGTTCCCCTGTATCTCTCAAGTACTATGCTTTCTGTCTACGTGAAGGCAAATATAATGTGACGCTCAAGTTTGCTGAAATTTTATACACCGAAGATACAGACTATACCAGTTTGAGGAAGCGTGCATTCGATATTTATATTCAGGATGAGATTAAAGTGCTACATGATTTCCACATTAGAGAGAACGCAGGAGGTCCAGATAAACCAATTACCAAAAGTTTTACAGCTGTGGTAAATAAAAATAATACTCTATTAACCATCCACATGTACTGGGATGGCAAGGGGTCTATTGAATACAGACCTGCGTTTAATGGACCTCTAATATCAGCTATTTCTGTTACTCCTGAATTCAAAATTCATGATGGGAAACTACGTCCCTTACATATTGCACTGATCGGGATAGGTTCAACCATTATTGCTGTGCTGCTTTTATTGGGTTTTGCCTGGATGGGCTGGTTCAGAAGCAGAAACTCACCCAAAATAAAAGTAGGTGAAGAAAAAAAAGGGGAAGGGACTCAAGACAAGCATGTCACCCTCAAAGAATTAATAGATGCTACTGGAAAGTTTAGCGACAAAAAGATAATTGGCAGTGGCAGTCTTGGGAAAGTTTATGAGGCACAACTACTAGGTCTTATTAAAACTACTGTAGCTGTGAAGAGACTTTCCTCTCATTTTAAAGAAAATATCCAAAAATTGAAAAAGGAAATCAAATGGTTATATGAATTGGAGCATGAAAATCTCATTAAATTGTTCGATTATCATATTGAGAAAGACCTCCAACTTCTTGTTTATGAATACATGGAAAACAGATCCCTGGAAGATGCATTGACTGGTAATGTATTTACTTCTTGTTCTAGCTAA

Protein Analysis

716

Amino Acids

80.15

Weight (kDa)

6.94

Isoelectric Point (pI)

35.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 101 - 190 7.7e-08 Leucine-rich repeat region
LRR_8 PF13855 136 - 194 7.5e-07 Leucine rich repeat
LRR_4 PF12799 136 - 170 1.9e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 178 - 261 1.4e-07 Leucine-rich repeat region
Malectin PF11721 360 - 541 9.7e-28 Malectin domain
Pkinase PF00069 620 - 709 1.5e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 622 - 707 1.3e-11 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1817
Acc36I ACCTGC 2 cut(s) 486, 1600
Acc65I GGTACC 1 cut(s) 333
AccB1I GGYRCC 2 cut(s) 333, 1211
AccB7I CCANNNNNTGG 1 cut(s) 418
AccI GTMKAC 3 cut(s) 210, 493, 1327
AciI CCGC 3 cut(s) 360, 662, 991
AclWI GGATC 7 cut(s) 429, 570, 880, 893, 1019, 1032, 2094
AcsI RAATTY 8 cut(s) 86, 273, 682, 734, 1251, 1368, 1637, 1644
AcuI CTGAAG 2 cut(s) 285, 875
AcyI GRCGYC 1 cut(s) 1212
AfaI GTAC 8 cut(s) 24, 111, 335, 398, 743, 954, 1313, 1559
AfiI CCNNNNNNNGG 4 cut(s) 418, 461, 533, 1404
AflIII ACRYGT 3 cut(s) 840, 1244, 1554
AgsI TTSAA 7 cut(s) 727, 790, 925, 1583, 1642, 1698, 1987
AjnI CCWGG 4 cut(s) 90, 877, 1733, 2103
AjuI GAANNNNNNNTTGG 2 cut(s) 520, 552
AleI CACNNNNGTG 1 cut(s) 143
AloI GAACNNNNNNTCC 2 cut(s) 72, 104
Alw21I GWGCWC 1 cut(s) 1288
Alw26I GTCTC 2 cut(s) 413, 1942
AlwI GGATC 7 cut(s) 429, 570, 880, 893, 1019, 1032, 2094
AlwNI CAGNNNCTG 1 cut(s) 1007
AoxI GGCC 1 cut(s) 708
ApeKI GCWGC 4 cut(s) 67, 386, 987, 1714
ApoI RAATTY 8 cut(s) 86, 273, 682, 734, 1251, 1368, 1637, 1644
AseI ATTAAT 1 cut(s) 1835
Asp700I GAANNNNTTC 1 cut(s) 977
Asp718I GGTACC 1 cut(s) 333
AspLEI GCGC 1 cut(s) 1214
AspS9I GGNCC 4 cut(s) 659, 708, 1484, 1604
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 5 cut(s) 335, 556, 1755, 1793, 1813
AvaII GGWCC 3 cut(s) 659, 1484, 1604
BamHI GGATCC 2 cut(s) 885, 1024
BanI GGYRCC 2 cut(s) 333, 1211
BanII GRGCYC 1 cut(s) 1288
BarI GAAGNNNNNNTAC 2 cut(s) 504, 536
Bbv12I GWGCWC 1 cut(s) 1288
BbvCI CCTCAGC 2 cut(s) 695, 1000
BbvI GCAGC 4 cut(s) 79, 373, 974, 1701
BccI CCATC 4 cut(s) 1556, 1559, 1646, 1732
BciT130I CCWGG 4 cut(s) 92, 879, 1735, 2105
BcnI CCSGG 1 cut(s) 1056
BcoDI GTCTC 2 cut(s) 413, 1942
BfaI CTAG 5 cut(s) 96, 906, 1221, 1916, 2145
BfmI CTRYAG 2 cut(s) 479, 1935
BfoI RGCGCY 1 cut(s) 1215
BfuAI ACCTGC 2 cut(s) 486, 1600
BglII AGATCT 1 cut(s) 913
BisI GCNGC 5 cut(s) 68, 387, 988, 991, 1715
BlsI GCNGC 5 cut(s) 69, 388, 989, 992, 1716
BmcAI AGTACT 3 cut(s) 24, 111, 1313
Bme1390I CCNGG 5 cut(s) 92, 879, 1056, 1735, 2105
Bme18I GGWCC 3 cut(s) 659, 1484, 1604
BmgT120I GGNCC 4 cut(s) 659, 708, 1484, 1604
BmiI GGNNCC 5 cut(s) 335, 376, 887, 1026, 1213
BmrFI CCNGG 5 cut(s) 92, 879, 1056, 1735, 2105
BmrI ACTGGG 2 cut(s) 1189, 1570
BmsI GCATC 3 cut(s) 412, 1831, 2101
BmuI ACTGGG 2 cut(s) 1189, 1570
BpmI CTGGAG 2 cut(s) 551, 969
Bpu10I CCTNAGC 2 cut(s) 695, 1000
BpuEI CTTGAG 4 cut(s) 802, 1292, 1340, 1791
BpuMI CCSGG 1 cut(s) 1056
BsaAI YACGTR 2 cut(s) 841, 1331
BsaHI GRCGYC 1 cut(s) 1212
BsaJI CCNNGG 3 cut(s) 417, 531, 2103
BsaXI ACNNNNNCTCC 2 cut(s) 549, 579
Bsc4I CCNNNNNNNGG 4 cut(s) 418, 461, 533, 1404
Bse118I RCCGGY 1 cut(s) 443
BseBI CCWGG 4 cut(s) 92, 879, 1735, 2105
BseDI CCNNGG 3 cut(s) 417, 531, 2103
BseGI GGATG 4 cut(s) 1441, 1548, 1570, 1743
BseLI CCNNNNNNNGG 4 cut(s) 418, 461, 533, 1404
BseMII CTCAG 3 cut(s) 633, 709, 1014
BseRI GAGGAG 1 cut(s) 988
BseXI GCAGC 4 cut(s) 79, 373, 974, 1701
BseYI CCCAGC 1 cut(s) 115
BshFI GGCC 1 cut(s) 710
BshNI GGYRCC 2 cut(s) 333, 1211
BsiHKAI GWGCWC 1 cut(s) 1288
BsiSI CCGG 3 cut(s) 357, 444, 1055
BslFI GGGAC 3 cut(s) 883, 1650, 1816
BslI CCNNNNNNNGG 4 cut(s) 418, 461, 533, 1404
BsmAI GTCTC 2 cut(s) 413, 1942
BsmBI CGTCTC 1 cut(s) 413
BsmFI GGGAC 3 cut(s) 883, 1650, 1816
BsmI GAATGC 1 cut(s) 1415
BsnI GGCC 1 cut(s) 710
Bsp1286I GDGCHC 1 cut(s) 1288
Bsp143I GATC 7 cut(s) 421, 562, 885, 913, 1024, 1683, 2099
BspACI CCGC 3 cut(s) 360, 662, 991
BspANI GGCC 1 cut(s) 710
BspCNI CTCAG 3 cut(s) 634, 708, 1013
BspHI TCATGA 1 cut(s) 1648
BspLI GGNNCC 5 cut(s) 335, 376, 887, 1026, 1213
BspMAI CTGCAG 1 cut(s) 483
BspMI ACCTGC 2 cut(s) 486, 1600
BspPI GGATC 7 cut(s) 429, 570, 880, 893, 1019, 1032, 2094
BspQI GCTCTTC 1 cut(s) 1198
BspT107I GGYRCC 2 cut(s) 333, 1211
BsrFI RCCGGY 1 cut(s) 443
BssAI RCCGGY 1 cut(s) 443
BssECI CCNNGG 3 cut(s) 417, 531, 2103
BssMI GATC 7 cut(s) 421, 562, 885, 913, 1024, 1683, 2099
BssNI GRCGYC 1 cut(s) 1212
BssT1I CCWWGG 2 cut(s) 417, 531
Bst2UI CCWGG 4 cut(s) 92, 879, 1735, 2105
Bst4CI ACNGT 6 cut(s) 145, 215, 1052, 1094, 1114, 1936
Bst6I CTCTTC 2 cut(s) 1198, 1940
BstACI GRCGYC 1 cut(s) 1212
BstAPI GCANNNNNTGC 1 cut(s) 478
BstBAI YACGTR 2 cut(s) 841, 1331
BstC8I GCNNGC 4 cut(s) 8, 171, 985, 1413
BstDEI CTNAG 4 cut(s) 488, 642, 695, 1000
BstEII GGTNACC 1 cut(s) 323
BstF5I GGATG 4 cut(s) 1441, 1548, 1570, 1743
BstH2I RGCGCY 1 cut(s) 1215
BstHHI GCGC 1 cut(s) 1214
BstKTI GATC 7 cut(s) 424, 565, 888, 916, 1027, 1686, 2102
BstMAI GTCTC 2 cut(s) 413, 1942
BstMBI GATC 7 cut(s) 421, 562, 885, 913, 1024, 1683, 2099
BstMWI GCNNNNNNNGC 2 cut(s) 34, 478
BstNI CCWGG 4 cut(s) 92, 879, 1735, 2105
BstNSI RCATGY 4 cut(s) 652, 1248, 1558, 1820
BstPI GGTNACC 1 cut(s) 323
BstSCI CCNGG 5 cut(s) 90, 877, 1054, 1733, 2103
BstSFI CTRYAG 2 cut(s) 479, 1935
BstV1I GCAGC 4 cut(s) 79, 373, 974, 1701
BstX2I RGATCY 6 cut(s) 421, 562, 885, 913, 1024, 2099
BstYI RGATCY 6 cut(s) 421, 562, 885, 913, 1024, 2099
BsuRI GGCC 1 cut(s) 710
BtsCI GGATG 4 cut(s) 1441, 1548, 1570, 1743
BtsI GCAGTG 1 cut(s) 1885
BtsIMutI CAGTG 6 cut(s) 539, 654, 938, 1005, 1679, 1885
BveI ACCTGC 2 cut(s) 486, 1600
Cac8I GCNNGC 4 cut(s) 8, 171, 985, 1413
CaiI CAGNNNCTG 1 cut(s) 1007
CciI TCATGA 1 cut(s) 1648
CfoI GCGC 1 cut(s) 1214
Cfr10I RCCGGY 1 cut(s) 443
Cfr13I GGNCC 4 cut(s) 659, 708, 1484, 1604
CseI GACGC 3 cut(s) 162, 1274, 1360
CsiI ACCWGGT 1 cut(s) 877
Csp6I GTAC 8 cut(s) 23, 110, 334, 397, 742, 953, 1312, 1558
CspCI CAANNNNNGTGG 2 cut(s) 513, 548
CviQI GTAC 8 cut(s) 23, 110, 334, 397, 742, 953, 1312, 1558
DdeI CTNAG 4 cut(s) 488, 642, 695, 1000
DinI GGCGCC 1 cut(s) 1213
DpnI GATC 7 cut(s) 423, 564, 887, 915, 1026, 1685, 2101
DpnII GATC 7 cut(s) 421, 562, 885, 913, 1024, 1683, 2099
DraI TTTAAA 1 cut(s) 1966
DrdI GACNNNNNNGTC 1 cut(s) 1817
DseDI GACNNNNNNGTC 1 cut(s) 1817
Eam1104I CTCTTC 2 cut(s) 1198, 1940
EarI CTCTTC 2 cut(s) 1198, 1940
Ecl136II GAGCTC 1 cut(s) 1286
Eco130I CCWWGG 2 cut(s) 417, 531
Eco24I GRGCYC 1 cut(s) 1288
Eco47I GGWCC 3 cut(s) 659, 1484, 1604
Eco53kI GAGCTC 1 cut(s) 1286
Eco57I CTGAAG 2 cut(s) 285, 875
Eco91I GGTNACC 1 cut(s) 323
EcoICRI GAGCTC 1 cut(s) 1286
EcoO65I GGTNACC 1 cut(s) 323
EcoRI GAATTC 1 cut(s) 1637
EcoRII CCWGG 4 cut(s) 90, 877, 1733, 2103
EcoT14I CCWWGG 2 cut(s) 417, 531
EcoT22I ATGCAT 1 cut(s) 2116
EcoT38I GRGCYC 1 cut(s) 1288
EgeI GGCGCC 1 cut(s) 1213
EheI GGCGCC 1 cut(s) 1213
ErhI CCWWGG 2 cut(s) 417, 531
Esp3I CGTCTC 1 cut(s) 413
FaqI GGGAC 3 cut(s) 883, 1650, 1816
FblI GTMKAC 3 cut(s) 210, 493, 1327
Fnu4HI GCNGC 5 cut(s) 68, 387, 988, 991, 1715
FokI GGATG 4 cut(s) 1448, 1535, 1577, 1750
FriOI GRGCYC 1 cut(s) 1288
Fsp4HI GCNGC 5 cut(s) 68, 387, 988, 991, 1715
FspBI CTAG 5 cut(s) 96, 906, 1221, 1916, 2145
GlaI GCGC 1 cut(s) 1213
GluI GCNGC 5 cut(s) 68, 387, 988, 991, 1715
GsaI CCCAGC 1 cut(s) 119
GsuI CTGGAG 2 cut(s) 551, 969
HaeII RGCGCY 1 cut(s) 1215
HaeIII GGCC 1 cut(s) 710
HapII CCGG 3 cut(s) 357, 444, 1055
HgaI GACGC 3 cut(s) 162, 1274, 1360
HhaI GCGC 1 cut(s) 1214
Hin1I GRCGYC 1 cut(s) 1212
Hin6I GCGC 1 cut(s) 1212
HinP1I GCGC 1 cut(s) 1212
HindIII AAGCTT 3 cut(s) 35, 548, 755
HinfI GANTC 3 cut(s) 807, 944, 1804
HpaII CCGG 3 cut(s) 357, 444, 1055
HphI GGTGA 5 cut(s) 335, 556, 1755, 1793, 1813
Hpy166II GTNNAC 7 cut(s) 211, 365, 494, 539, 744, 806, 1328
Hpy188I TCNGA 7 cut(s) 79, 178, 624, 643, 829, 972, 1751
Hpy188III TCNNGA 8 cut(s) 596, 948, 1433, 1487, 1634, 1649, 1687, 1808
Hpy8I GTNNAC 7 cut(s) 211, 365, 494, 539, 744, 806, 1328
Hpy99I CGWCG 1 cut(s) 1293
HpyAV CCTTC 9 cut(s) 21, 338, 506, 712, 899, 1165, 1196, 1328, 1793
HpyCH4III ACNGT 6 cut(s) 145, 215, 1052, 1094, 1114, 1936
HpyCH4IV ACGT 3 cut(s) 840, 1330, 1663
HpyCH4V TGCA 7 cut(s) 389, 403, 472, 481, 1415, 1679, 2114
HpyF10VI GCNNNNNNNGC 2 cut(s) 34, 478
HpyF3I CTNAG 4 cut(s) 488, 642, 695, 1000
HpySE526I ACGT 3 cut(s) 840, 1330, 1663
Hsp92I GRCGYC 1 cut(s) 1212
HspAI GCGC 1 cut(s) 1212
KasI GGCGCC 1 cut(s) 1211
KpnI GGTACC 1 cut(s) 337
Kzo9I GATC 7 cut(s) 421, 562, 885, 913, 1024, 1683, 2099
LguI GCTCTTC 1 cut(s) 1198
LmnI GCTCC 3 cut(s) 380, 704, 2017
Lsp1109I GCAGC 4 cut(s) 79, 373, 974, 1701
LweI GCATC 3 cut(s) 412, 1831, 2101
MabI ACCWGGT 1 cut(s) 877
MaeI CTAG 5 cut(s) 96, 906, 1221, 1916, 2145
MaeII ACGT 3 cut(s) 840, 1330, 1663
MaeIII GTNAC 5 cut(s) 236, 323, 1348, 1627, 1819
MalI GATC 7 cut(s) 423, 564, 887, 915, 1026, 1685, 2101
MboI GATC 7 cut(s) 421, 562, 885, 913, 1024, 1683, 2099
MboII GAAGA 8 cut(s) 326, 1150, 1185, 1246, 1394, 1796, 1957, 2120
MflI RGATCY 6 cut(s) 421, 562, 885, 913, 1024, 2099
MhlI GDGCHC 1 cut(s) 1288
Mly113I GGCGCC 1 cut(s) 1212
MlyI GAGTC 3 cut(s) 801, 938, 1798
MmeI TCCRAC 3 cut(s) 138, 863, 2092
Mph1103I ATGCAT 1 cut(s) 2116
MroXI GAANNNNTTC 1 cut(s) 977
MslI CAYNNNNRTG 3 cut(s) 143, 857, 1553
MspA1I CMGCKG 3 cut(s) 119, 386, 1517
MspI CCGG 3 cut(s) 357, 444, 1055
MspR9I CCNGG 5 cut(s) 92, 879, 1056, 1735, 2105
Mva1269I GAATGC 1 cut(s) 1415
MvaI CCWGG 4 cut(s) 92, 879, 1735, 2105
MwoI GCNNNNNNNGC 2 cut(s) 34, 478
NarI GGCGCC 1 cut(s) 1212
NciI CCSGG 1 cut(s) 1056
NdeII GATC 7 cut(s) 421, 562, 885, 913, 1024, 1683, 2099
NlaIV GGNNCC 5 cut(s) 335, 376, 887, 1026, 1213
NmuCI GTSAC 3 cut(s) 323, 1348, 1819
NsiI ATGCAT 1 cut(s) 2116
NspI RCATGY 4 cut(s) 652, 1248, 1558, 1820
OliI CACNNNNGTG 1 cut(s) 143
PagI TCATGA 1 cut(s) 1648
PciI ACATGT 2 cut(s) 1244, 1554
PciSI GCTCTTC 1 cut(s) 1198
PctI GAATGC 1 cut(s) 1415
PdmI GAANNNNTTC 1 cut(s) 977
PflMI CCANNNNNTGG 1 cut(s) 418
PfoI TCCNGGA 1 cut(s) 1054
PkrI GCNGC 5 cut(s) 69, 388, 989, 992, 1716
PleI GAGTC 3 cut(s) 801, 938, 1798
PluTI GGCGCC 1 cut(s) 1215
PpsI GAGTC 3 cut(s) 801, 938, 1798
Ppu21I YACGTR 2 cut(s) 841, 1331
PscI ACATGT 2 cut(s) 1244, 1554
PshBI ATTAAT 1 cut(s) 1835
Psp124BI GAGCTC 1 cut(s) 1288
Psp6I CCWGG 4 cut(s) 90, 877, 1733, 2103
PspEI GGTNACC 1 cut(s) 323
PspFI CCCAGC 1 cut(s) 115
PspGI CCWGG 4 cut(s) 90, 877, 1733, 2103
PspN4I GGNNCC 5 cut(s) 335, 376, 887, 1026, 1213
PspPI GGNCC 4 cut(s) 659, 708, 1484, 1604
PstI CTGCAG 1 cut(s) 483
PstNI CAGNNNCTG 1 cut(s) 1007
PsuI RGATCY 6 cut(s) 421, 562, 885, 913, 1024, 2099
PvuII CAGCTG 3 cut(s) 119, 386, 1517
RsaI GTAC 8 cut(s) 24, 111, 335, 398, 743, 954, 1313, 1559
RsaNI GTAC 8 cut(s) 23, 110, 334, 397, 742, 953, 1312, 1558
RseI CAYNNNNRTG 3 cut(s) 143, 857, 1553
SacI GAGCTC 1 cut(s) 1288
SapI GCTCTTC 1 cut(s) 1198
SatI GCNGC 5 cut(s) 68, 387, 988, 991, 1715
Sau3AI GATC 7 cut(s) 421, 562, 885, 913, 1024, 1683, 2099
Sau96I GGNCC 4 cut(s) 659, 708, 1484, 1604
ScaI AGTACT 3 cut(s) 24, 111, 1313
SchI GAGTC 3 cut(s) 801, 938, 1798
ScrFI CCNGG 5 cut(s) 92, 879, 1056, 1735, 2105
SduI GDGCHC 1 cut(s) 1288
SexAI ACCWGGT 1 cut(s) 877
SfaNI GCATC 3 cut(s) 412, 1831, 2101
SfcI CTRYAG 2 cut(s) 479, 1935
SfoI GGCGCC 1 cut(s) 1213
SinI GGWCC 3 cut(s) 659, 1484, 1604
SmiMI CAYNNNNRTG 3 cut(s) 143, 857, 1553
SmlI CTYRAG 4 cut(s) 781, 1307, 1355, 1806
SmoI CTYRAG 4 cut(s) 781, 1307, 1355, 1806
SsiI CCGC 3 cut(s) 360, 662, 991
SspDI GGCGCC 1 cut(s) 1211
SspI AATATT 2 cut(s) 205, 773
SspMI CTAG 5 cut(s) 96, 906, 1221, 1916, 2145
SstI GAGCTC 1 cut(s) 1288
StyD4I CCNGG 5 cut(s) 90, 877, 1054, 1733, 2103
StyI CCWWGG 2 cut(s) 417, 531
TaaI ACNGT 6 cut(s) 145, 215, 1052, 1094, 1114, 1936
TaiI ACGT 3 cut(s) 843, 1333, 1666
TaqI TCGA 3 cut(s) 348, 1419, 2043
TatI WGTACW 4 cut(s) 22, 109, 1311, 1557
TauI GCSGC 1 cut(s) 993
TscAI CASTG 6 cut(s) 546, 661, 945, 1012, 1686, 1885
TseFI GTSAC 3 cut(s) 323, 1348, 1819
TseI GCWGC 4 cut(s) 67, 386, 987, 1714
Tsp45I GTSAC 3 cut(s) 323, 1348, 1819
TspGWI ACGGA 2 cut(s) 269, 729
TspRI CASTG 6 cut(s) 546, 661, 945, 1012, 1686, 1885
Van91I CCANNNNNTGG 1 cut(s) 418
VpaK11BI GGWCC 3 cut(s) 659, 1484, 1604
VspI ATTAAT 1 cut(s) 1835
XapI RAATTY 8 cut(s) 86, 273, 682, 734, 1251, 1368, 1637, 1644
XceI RCATGY 4 cut(s) 652, 1248, 1558, 1820
XcmI CCANNNNNNNNNTGG 1 cut(s) 1176
XmiI GTMKAC 3 cut(s) 210, 493, 1327
XmnI GAANNNNTTC 1 cut(s) 977
XspI CTAG 5 cut(s) 96, 906, 1221, 1916, 2145
ZrmI AGTACT 3 cut(s) 24, 111, 1313
Zsp2I ATGCAT 1 cut(s) 2116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.