Rmu_sc0014338.1_g000004

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014338.1
Physical Location & Seq
Forward (+)
8825 .. 12497
3673 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014338.1_g000004.1.cds

Sequence Viewer

Length: 1137 bp
atgcttaggcattttgacaatgtcaagccttcaagcacccccatgatcgtccgtagtcttgatcctgaaaaagatcctctttgtcgaaatgatgatgacgaagatgtgctagaggcagaagtgccttacttagtacaattggcgcattattatatctttcggtacttgagatgtacgattgatatggactcgttctatccctatagagagataatggattcaaacccatcacacaccaggaacgccgccaacagtggtctgtgtcctctatccccatcccaaaacgacctgttttggaaggttttgctgatgttggatatctctttgacccatacaaatgtcattctcaaattggttaagtgttcaccatggcttggctctgaattcaaatatcagagtacagctcaaccattgcccgatgaagaagtgagagctcttaatgaaatagcatataagttggagttaaaaggacgaatgttctatgaaggctcactttgcaatggaagcggcgatgttggcgtctactgtgactgcagttccggcaccatttgccacgtcacatatattgagctaactgctaggggtttgtctggagttatacctgaagaatttgccaatctcacatatctgcaaagcttgtttctcgataataatcaattgacaggtcccatacctgctagcttggggaaattatctttgctctacaggctggatctttccaataatcaattgaccgggtccattccagcgagtttgggaaatatgaagtttcaagcattattgttcgaccatctctttctgaatccttcttctcatcgccgcgtggatattgaattcacactggatctttcagacaatcaattgagtggatccataccagccactttagggaatttggccctctctttggtgatatctgatccagaagcctaccgactcgtcaagcttaagcaatatgacagtgcttatgtaatgtcatcgttctacctgagtctttcaaacaatcaactgactgggcctataccaaagagcttagggaatttgattttcgccgatactattgatctgcatggcaactttctcaacgcctctataccagcatctttgggggcggtgacttttcttaagtctctgtaa

Protein Analysis

378

Amino Acids

42.07

Weight (kDa)

5.02

Isoelectric Point (pI)

35.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 682
AccB1I GGYRCC 1 cut(s) 542
AccB7I CCANNNNNTGG 1 cut(s) 374
AccI GTMKAC 1 cut(s) 522
AccII CGCG 1 cut(s) 822
AciI CCGC 4 cut(s) 246, 507, 820, 1112
AclWI GGATC 7 cut(s) 56, 68, 720, 852, 864, 877, 914
AcsI RAATTY 5 cut(s) 383, 608, 833, 892, 1039
AcuI CTGAAG 1 cut(s) 624
AcyI GRCGYC 1 cut(s) 519
AfaI GTAC 4 cut(s) 135, 164, 175, 400
AfiI CCNNNNNNNGG 3 cut(s) 374, 888, 907
AflII CTTAAG 2 cut(s) 947, 1124
AgsI TTSAA 6 cut(s) 33, 222, 388, 773, 833, 999
AjiI CACGTC 1 cut(s) 556
AjnI CCWGG 1 cut(s) 236
AluBI AGCT 7 cut(s) 404, 434, 571, 636, 681, 946, 1032
AluI AGCT 7 cut(s) 404, 434, 571, 636, 681, 946, 1032
Alw21I GWGCWC 1 cut(s) 436
AlwI GGATC 7 cut(s) 56, 68, 720, 852, 864, 877, 914
AoxI GGCC 2 cut(s) 897, 1016
ApoI RAATTY 5 cut(s) 383, 608, 833, 892, 1039
AspLEI GCGC 1 cut(s) 145
AspS9I GGNCC 4 cut(s) 665, 738, 898, 1016
AsuC2I CCSGG 1 cut(s) 736
AsuHPI GGTGA 3 cut(s) 357, 922, 1126
AsuNHI GCTAGC 1 cut(s) 677
AvaII GGWCC 2 cut(s) 665, 738
BamHI GGATCC 1 cut(s) 869
BanI GGYRCC 1 cut(s) 542
BanII GRGCYC 1 cut(s) 436
Bbv12I GWGCWC 1 cut(s) 436
BccI CCATC 3 cut(s) 235, 283, 798
BciT130I CCWGG 1 cut(s) 238
BcnI CCSGG 1 cut(s) 736
BfaI CTAG 3 cut(s) 110, 579, 678
BfmI CTRYAG 3 cut(s) 202, 532, 703
BfrI CTTAAG 2 cut(s) 947, 1124
BfuAI ACCTGC 1 cut(s) 682
BisI GCNGC 3 cut(s) 246, 508, 820
BlsI GCNGC 3 cut(s) 247, 509, 821
Bme1390I CCNGG 2 cut(s) 238, 736
Bme18I GGWCC 2 cut(s) 665, 738
BmgBI CACGTC 1 cut(s) 556
BmgT120I GGNCC 4 cut(s) 665, 738, 898, 1016
BmiI GGNNCC 4 cut(s) 544, 667, 739, 871
BmrFI CCNGG 2 cut(s) 238, 736
BmrI ACTGGG 1 cut(s) 1023
BmsI GCATC 1 cut(s) 1109
BmtI GCTAGC 1 cut(s) 681
BmuI ACTGGG 1 cut(s) 1023
BplI GAGNNNNNCTC 2 cut(s) 388, 420
BpmI CTGGAG 1 cut(s) 612
Bpu10I CCTNAGC 2 cut(s) 5, 1033
BpuEI CTTGAG 1 cut(s) 187
BpuMI CCSGG 1 cut(s) 736
BsaBI GATNNNNATC 1 cut(s) 651
BsaHI GRCGYC 1 cut(s) 519
BsaJI CCNNGG 1 cut(s) 368
Bsc4I CCNNNNNNNGG 3 cut(s) 374, 888, 907
Bse1I ACTGG 2 cut(s) 846, 1018
Bse3DI GCAATG 2 cut(s) 410, 505
Bse8I GATNNNNATC 1 cut(s) 651
BseBI CCWGG 1 cut(s) 238
BseDI CCNNGG 1 cut(s) 368
BseGI GGATG 1 cut(s) 275
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 3 cut(s) 374, 888, 907
BseMI GCAATG 2 cut(s) 410, 505
BseMII CTCAG 1 cut(s) 980
BseNI ACTGG 2 cut(s) 846, 1018
Bsh1236I CGCG 1 cut(s) 822
BshFI GGCC 2 cut(s) 899, 1018
BshNI GGYRCC 1 cut(s) 542
BsiHKAI GWGCWC 1 cut(s) 436
BsiSI CCGG 2 cut(s) 540, 735
BslFI GGGAC 1 cut(s) 651
BslI CCNNNNNNNGG 3 cut(s) 374, 888, 907
BsmFI GGGAC 1 cut(s) 651
BsnI GGCC 2 cut(s) 899, 1018
Bsp1286I GDGCHC 1 cut(s) 436
Bsp143I GATC 8 cut(s) 45, 61, 73, 712, 844, 869, 919, 1063
Bsp19I CCATGG 1 cut(s) 368
BspACI CCGC 4 cut(s) 246, 507, 820, 1112
BspANI GGCC 2 cut(s) 899, 1018
BspCNI CTCAG 1 cut(s) 981
BspFNI CGCG 1 cut(s) 822
BspLI GGNNCC 4 cut(s) 544, 667, 739, 871
BspMAI CTGCAG 1 cut(s) 536
BspMI ACCTGC 1 cut(s) 682
BspOI GCTAGC 1 cut(s) 681
BspPI GGATC 7 cut(s) 56, 68, 720, 852, 864, 877, 914
BspT107I GGYRCC 1 cut(s) 542
BspTI CTTAAG 2 cut(s) 947, 1124
BsrDI GCAATG 2 cut(s) 410, 505
BsrI ACTGG 2 cut(s) 846, 1018
BssECI CCNNGG 1 cut(s) 368
BssMI GATC 8 cut(s) 45, 61, 73, 712, 844, 869, 919, 1063
BssNI GRCGYC 1 cut(s) 519
BssT1I CCWWGG 1 cut(s) 368
Bst2UI CCWGG 1 cut(s) 238
Bst4CI ACNGT 3 cut(s) 254, 527, 962
BstACI GRCGYC 1 cut(s) 519
BstAFI CTTAAG 2 cut(s) 947, 1124
BstAPI GCANNNNNTGC 1 cut(s) 549
BstC8I GCNNGC 1 cut(s) 679
BstDEI CTNAG 4 cut(s) 5, 130, 989, 1033
BstDSI CCRYGG 1 cut(s) 368
BstF5I GGATG 1 cut(s) 275
BstFNI CGCG 1 cut(s) 822
BstHHI GCGC 1 cut(s) 145
BstKTI GATC 8 cut(s) 48, 64, 76, 715, 847, 872, 922, 1066
BstMBI GATC 8 cut(s) 45, 61, 73, 712, 844, 869, 919, 1063
BstMWI GCNNNNNNNGC 6 cut(s) 495, 504, 516, 540, 549, 706
BstNI CCWGG 1 cut(s) 238
BstSCI CCNGG 2 cut(s) 236, 734
BstSFI CTRYAG 3 cut(s) 202, 532, 703
BstUI CGCG 1 cut(s) 822
BstX2I RGATCY 4 cut(s) 73, 712, 844, 869
BstYI RGATCY 4 cut(s) 73, 712, 844, 869
BsuRI GGCC 2 cut(s) 899, 1018
BtgI CCRYGG 1 cut(s) 368
BtgZI GCGATG 2 cut(s) 525, 800
BtrI CACGTC 1 cut(s) 556
BtsCI GGATG 1 cut(s) 275
BtsIMutI CAGTG 3 cut(s) 259, 839, 967
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 1 cut(s) 679
CfoI GCGC 1 cut(s) 145
Cfr13I GGNCC 4 cut(s) 665, 738, 898, 1016
CseI GACGC 1 cut(s) 508
Csp6I GTAC 4 cut(s) 134, 163, 174, 399
CviAII CATG 3 cut(s) 43, 369, 1070
CviQI GTAC 4 cut(s) 134, 163, 174, 399
DdeI CTNAG 4 cut(s) 5, 130, 989, 1033
DpnI GATC 8 cut(s) 47, 63, 75, 714, 846, 871, 921, 1065
DpnII GATC 8 cut(s) 45, 61, 73, 712, 844, 869, 919, 1063
Ecl136II GAGCTC 1 cut(s) 434
Eco130I CCWWGG 1 cut(s) 368
Eco24I GRGCYC 1 cut(s) 436
Eco32I GATATC 2 cut(s) 319, 915
Eco47I GGWCC 2 cut(s) 665, 738
Eco53kI GAGCTC 1 cut(s) 434
Eco57I CTGAAG 1 cut(s) 624
EcoICRI GAGCTC 1 cut(s) 434
EcoO109I RGGNCCY 1 cut(s) 665
EcoRI GAATTC 2 cut(s) 383, 833
EcoRII CCWGG 1 cut(s) 236
EcoRV GATATC 2 cut(s) 319, 915
EcoT14I CCWWGG 1 cut(s) 368
EcoT38I GRGCYC 1 cut(s) 436
ErhI CCWWGG 1 cut(s) 368
FaeI CATG 3 cut(s) 46, 372, 1073
FalI AAGNNNNNCTT 4 cut(s) 63, 95, 477, 509
FaqI GGGAC 1 cut(s) 651
FatI CATG 3 cut(s) 42, 368, 1069
FblI GTMKAC 1 cut(s) 522
Fnu4HI GCNGC 3 cut(s) 246, 508, 820
FokI GGATG 1 cut(s) 262
FriOI GRGCYC 1 cut(s) 436
Fsp4HI GCNGC 3 cut(s) 246, 508, 820
FspBI CTAG 3 cut(s) 110, 579, 678
GlaI GCGC 1 cut(s) 144
GluI GCNGC 3 cut(s) 246, 508, 820
GsuI CTGGAG 1 cut(s) 612
HaeIII GGCC 2 cut(s) 899, 1018
HapII CCGG 2 cut(s) 540, 735
HgaI GACGC 1 cut(s) 508
HhaI GCGC 1 cut(s) 145
Hin1I GRCGYC 1 cut(s) 519
Hin1II CATG 3 cut(s) 46, 372, 1073
Hin6I GCGC 1 cut(s) 143
HinP1I GCGC 1 cut(s) 143
HindIII AAGCTT 2 cut(s) 634, 944
HinfI GANTC 5 cut(s) 188, 218, 802, 936, 991
HpaII CCGG 2 cut(s) 540, 735
HphI GGTGA 3 cut(s) 357, 922, 1126
Hpy166II GTNNAC 2 cut(s) 365, 523
Hpy188I TCNGA 5 cut(s) 382, 396, 801, 853, 919
Hpy188III TCNNGA 5 cut(s) 59, 65, 591, 644, 923
Hpy8I GTNNAC 2 cut(s) 365, 523
HpyAV CCTTC 4 cut(s) 39, 292, 479, 816
HpyCH4III ACNGT 3 cut(s) 254, 527, 962
HpyCH4IV ACGT 1 cut(s) 555
HpyCH4V TGCA 4 cut(s) 498, 534, 631, 1069
HpyF10VI GCNNNNNNNGC 6 cut(s) 495, 504, 516, 540, 549, 706
HpyF3I CTNAG 4 cut(s) 5, 130, 989, 1033
HpySE526I ACGT 1 cut(s) 555
Hsp92I GRCGYC 1 cut(s) 519
Hsp92II CATG 3 cut(s) 46, 372, 1073
HspAI GCGC 1 cut(s) 143
Kzo9I GATC 8 cut(s) 45, 61, 73, 712, 844, 869, 919, 1063
LweI GCATC 1 cut(s) 1109
MaeI CTAG 3 cut(s) 110, 579, 678
MaeII ACGT 1 cut(s) 555
MaeIII GTNAC 3 cut(s) 527, 556, 1114
MalI GATC 8 cut(s) 47, 63, 75, 714, 846, 871, 921, 1065
MboI GATC 8 cut(s) 45, 61, 73, 712, 844, 869, 919, 1063
MboII GAAGA 4 cut(s) 113, 434, 617, 801
MfeI CAATTG 4 cut(s) 137, 656, 728, 860
MflI RGATCY 4 cut(s) 73, 712, 844, 869
MhlI GDGCHC 1 cut(s) 436
MlyI GAGTC 3 cut(s) 182, 930, 1000
MmeI TCCRAC 2 cut(s) 294, 438
MnlI CCTC 5 cut(s) 87, 106, 276, 911, 1099
MseI TTAA 5 cut(s) 357, 438, 464, 948, 1125
MslI CAYNNNNRTG 2 cut(s) 41, 336
MspCI CTTAAG 2 cut(s) 947, 1124
MspI CCGG 2 cut(s) 540, 735
MspR9I CCNGG 2 cut(s) 238, 736
MunI CAATTG 4 cut(s) 137, 656, 728, 860
MvaI CCWGG 1 cut(s) 238
MvnI CGCG 1 cut(s) 822
MwoI GCNNNNNNNGC 6 cut(s) 495, 504, 516, 540, 549, 706
NciI CCSGG 1 cut(s) 736
NcoI CCATGG 1 cut(s) 368
NdeII GATC 8 cut(s) 45, 61, 73, 712, 844, 869, 919, 1063
NheI GCTAGC 1 cut(s) 677
NlaIII CATG 3 cut(s) 46, 372, 1073
NlaIV GGNNCC 4 cut(s) 544, 667, 739, 871
NmuCI GTSAC 3 cut(s) 527, 556, 1114
PfeI GAWTC 2 cut(s) 218, 802
PflFI GACNNNGTC 2 cut(s) 20, 736
PflMI CCANNNNNTGG 1 cut(s) 374
PkrI GCNGC 3 cut(s) 247, 509, 821
PleI GAGTC 3 cut(s) 182, 930, 999
PpsI GAGTC 3 cut(s) 182, 930, 999
PpuMI RGGWCCY 1 cut(s) 665
Psp124BI GAGCTC 1 cut(s) 436
Psp5II RGGWCCY 1 cut(s) 665
Psp6I CCWGG 1 cut(s) 236
PspGI CCWGG 1 cut(s) 236
PspN4I GGNNCC 4 cut(s) 544, 667, 739, 871
PspPI GGNCC 4 cut(s) 665, 738, 898, 1016
PspPPI RGGWCCY 1 cut(s) 665
PstI CTGCAG 1 cut(s) 536
PsuI RGATCY 4 cut(s) 73, 712, 844, 869
PsyI GACNNNGTC 2 cut(s) 20, 736
RsaI GTAC 4 cut(s) 135, 164, 175, 400
RsaNI GTAC 4 cut(s) 134, 163, 174, 399
RseI CAYNNNNRTG 2 cut(s) 41, 336
SacI GAGCTC 1 cut(s) 436
SaqAI TTAA 5 cut(s) 357, 438, 464, 948, 1125
SatI GCNGC 3 cut(s) 246, 508, 820
Sau3AI GATC 8 cut(s) 45, 61, 73, 712, 844, 869, 919, 1063
Sau96I GGNCC 4 cut(s) 665, 738, 898, 1016
SchI GAGTC 3 cut(s) 182, 930, 1000
ScrFI CCNGG 2 cut(s) 238, 736
SduI GDGCHC 1 cut(s) 436
SfaNI GCATC 1 cut(s) 1109
SfcI CTRYAG 3 cut(s) 202, 532, 703
SinI GGWCC 2 cut(s) 665, 738
SmiMI CAYNNNNRTG 2 cut(s) 41, 336
SmlI CTYRAG 3 cut(s) 166, 947, 1124
SmoI CTYRAG 3 cut(s) 166, 947, 1124
SsiI CCGC 4 cut(s) 246, 507, 820, 1112
SspMI CTAG 3 cut(s) 110, 579, 678
SstI GAGCTC 1 cut(s) 436
StyD4I CCNGG 2 cut(s) 236, 734
StyI CCWWGG 1 cut(s) 368
TaaI ACNGT 3 cut(s) 254, 527, 962
TaiI ACGT 1 cut(s) 558
TaqI TCGA 3 cut(s) 85, 645, 786
TatI WGTACW 2 cut(s) 133, 398
TauI GCSGC 3 cut(s) 248, 510, 822
TfiI GAWTC 2 cut(s) 218, 802
Tru1I TTAA 5 cut(s) 357, 438, 464, 948, 1125
Tru9I TTAA 5 cut(s) 357, 438, 464, 948, 1125
TscAI CASTG 3 cut(s) 259, 846, 967
TseFI GTSAC 3 cut(s) 527, 556, 1114
Tsp45I GTSAC 3 cut(s) 527, 556, 1114
TspDTI ATGAA 4 cut(s) 435, 456, 498, 779
TspGWI ACGGA 1 cut(s) 41
TspRI CASTG 3 cut(s) 259, 846, 967
Tth111I GACNNNGTC 2 cut(s) 20, 736
Van91I CCANNNNNTGG 1 cut(s) 374
Vha464I CTTAAG 2 cut(s) 947, 1124
VpaK11BI GGWCC 2 cut(s) 665, 738
XapI RAATTY 5 cut(s) 383, 608, 833, 892, 1039
XmiI GTMKAC 1 cut(s) 522
XspI CTAG 3 cut(s) 110, 579, 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.