Rorug04G0389500

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
55777572 .. 55790530
12959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0389500.1

Sequence Viewer

Length: 2859 bp
ATGGCGGCTATCCCATTCTCAGCTACATCCAAACCATCAAAGTCAGCTACTCATTCCACGTTCATCTCGAGCTTCATAGCAGGCTCCAACCACATAGGAAGACATTCAAGGCTGTTCTTGAACTCAACCTCTGGTTCTGTTTCTGGCCGAGCTAGGAGAAAGCTCTGTGTGAAGAATGTGGCTGCTACTGATCAAAAGCAAGAACCTAAAGACGTTGCCACCCGAGAAGATTCTGCATCCATTTCATCGATAATCAAATACCACGCGGAATTCACACCTTGCTTCTCTATGGAATCGTTTGGACTTCCCAAGGCATTCTATGCCACCGCGGAGAGTGTTCGTGATATGCTTATCATTAACTGGAATACTACATATGAGTACTGTGAGAAGTTGAATGTAAAGCAGGCATATTATCTCTCAATGGAGTATCTACAGGGTAGAGCATTGTTAAATGCAATTGGCAACTTGGAGCTTTCAGGGCCTTATGCAGAGGCTTTGGAAAAGCTTGGGCACAATCTTGAGGATGTAGCTAGGCAGGAACCAGATGCTGCTCTTGGAAATGGGGGGCTAGGGAGGCTTGCTTCCTGCTTTTTGGACTCCCTGGCGACCCAAAATTACCCGGCATGGGGATATGGACTAAGATACAAGTATGGATTGTTTAAGCAACACATTACAAAAGATGGCCAGGAGGAAGTTGCTGAAAATTGGCTTGAGATGGGCAATCCATGGGAAATTCCAAGAAATGATGTAACCTATCCTGTGAAATTCTATGGTGAAGTTATTTCGGGGCCAGATGGGAAAAAACAATGGGTTGGAGGAGACAATGTCACCGCTGTTGCCTATGATGTCCCCATACCAGGATATAAAACTAAAACCACCATAAACCTTCGACTGTGGTCCACAAAGGCTGCACCAGCAGAATTTGATTTGCATGCTTTCAACACTGGAGATCATGCCAAGGCATATGCAGCTATAAAGAATGCAGAAAAGATCTGTTACATATTGTACCCCGGGGATGAAACCATGGAGGGAAAATCACTTAGATTGAAGCAACAATATACACTATGTTCTGCTTCTCTCCAAGACATAATCTCACGTTTTGAAAGGAGATCAGGGGACCCTGTGAATTGGGAAAAATTTCCTGAAAAAGTTGCAGTGCAGATGAATGATACTCATCCAACTCTCTGCATTCCAGAGTTGATAAGAATATTGGTGGATGTGAAGGGATTGAGCTGGAAGGAAGCCTGGAATGTTACTCGAAGAACTGTTGCATACACAAACCATACAGTTCTACCCGAGGCATTGGAGAAATGGAGTTTAAATCTTATACAGGAGTTGTTGCCAAGACATGTTGAGATCATAAAAATGATTGATGAGGAGCTAATTCATACTATTGTTGCTGAGTATGGCACGGAGGATCTTGACTTGTTGCTACAAAAAGTGAAAGAAATGAGAATTCTAGATAACATTGAGTTGCCTGACTCTGTCTTGGAAATGCTCCCTAAATCAGAAGAAAGCTCCGTGGTTGATCACATTGAGTCGGTTTCTGATAACGAAACTAAAGGCACTGACGAAGGAGACCAATCTCAAGTACTGGACACTGAGAAGAAAAATGAGGTTACATTTGAACCAGATCCTGAGCTGCCAAAGATGGTGCGCATGGCTAATCTATGTATTGCTGGTGGACATGCAGTAAATGGAGTTGCTGAGATTCATAGTGAAATAGTGAAGAACGAAGTATTTAACGATTTCTATAAGTTGTGGCCTGAGAAATTTCAAAATAAGACCAATGGGGTAACACCTCGAAGATGGATTCGTTTCTGCAATCCAGATCAAAGTAGACTTATAACCAAGTGCATTGGAACAGAAGAGTGGGTAAAAAATACTGAGATGTTGGTGAACCTTCAAAAGTTTGCTGATAATGAAGATTTCCAGTCTGAATGGAGGGAAGTAAAAATGAGAAACAAGATTAAGGTTGCATCATTCCTCAAGGAAAAAACTGGTTATCTAGTCAACCCCAATGCGATGTTTGATGTACAGGTGAAGCGCATCCATGAATATAAACGGCAGCTAATGAATATCATGGGAATTATTTATCGATACAAGAAAATGAAGGAAATGAGTCCCAAAGAAAGAGAAGCAAGGTTTGTTCCAAGGGTGTGTATATTTGGAGGGAAGGCATTCGCGACATATGTTCAAGCCAAAAGGATTGTGAAATTCATCACTGATGTTGGAGCCATTGTAAACCGCGATCAAGAGATAGGTGATCTTTTGAAAGTTGTGTTTGTTCCTGATTACAATGTGAGTGTTGCAGAAGTGCTTATTCCAGGTAGTGAACTGTCCCAGCATATCAGTACTGCTGGAATGGAGGCCAGTGGAACTAGCAATATGAAGTTTGCAATGAACGGGTGTATACAAATTGGAACTCTAGATGGGGCTAATGTTGAAATAAGGGAAGAGGTTGGAGAGGAAAATTTTTTCCTCTTTGGTGCTAGAGCTGAAGAAATATCTGGACTAAGGAAACAAAGATCTGAAGCAAAGTTCGTGGCGGATCCACGGTTTGAAGAAGTGAAGGCATATGTGAGGAGTGGTATTTTCGGTCCTTACAACTACGATGAACTGATGGGATCTCTGGAAGGAAATGAAGGTTACGGTCGTGCTGATTATTTTCTTGTTGGATACGACTTCCCTAGTTATATAGAATGCCAAGACAATGTCGATGAAGCATATCGAGATCAAAAGAGATGGACAAAGATGTCGATTTTGAACACAGCTGGTTCATACAAATTCAGCAGTGACCGTACAATTCATGAATATGCAAGAGACATATGGAGGATCGAACCTATAGTACTGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

952

Amino Acids

108.02

Weight (kDa)

5.71

Isoelectric Point (pI)

43.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phosphorylase PF00343 166 - 488 8.9e-128 Carbohydrate phosphorylase
Phosphorylase PF00343 547 - 946 2.4e-165 Carbohydrate phosphorylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1847
AasI GACNNNNNNGTC 1 cut(s) 2755
Acc16I TGCGCA 1 cut(s) 1658
AccI GTMKAC 2 cut(s) 1840, 2413
AccII CGCG 4 cut(s) 266, 329, 2186, 2250
AciI CCGC 7 cut(s) 5, 266, 327, 329, 831, 2248, 2549
AclWI GGATC 6 cut(s) 1425, 1628, 2546, 2559, 2635, 2843
AcoI YGGCCR 2 cut(s) 145, 682
AcuI CTGAAG 2 cut(s) 2520, 2553
AfaI GTAC 7 cut(s) 380, 1007, 1593, 2037, 2356, 2803, 2850
AfiI CCNNNNNNNGG 3 cut(s) 625, 626, 857
AflIII ACRYGT 1 cut(s) 1348
AjnI CCWGG 5 cut(s) 600, 684, 856, 1244, 2326
Alw26I GTCTC 3 cut(s) 813, 1572, 2817
AlwI GGATC 6 cut(s) 1425, 1628, 2546, 2559, 2635, 2843
AlwNI CAGNNNCTG 2 cut(s) 548, 1637
Ama87I CYCGRG 4 cut(s) 67, 222, 1010, 1295
AoxI GGCC 6 cut(s) 145, 479, 682, 788, 1763, 2370
ApeKI GCWGC 6 cut(s) 182, 548, 908, 968, 1642, 2068
Asp700I GAANNNNTTC 3 cut(s) 103, 1137, 2180
AspLEI GCGC 2 cut(s) 1659, 2049
AspS9I GGNCC 5 cut(s) 479, 788, 897, 1117, 2600
AsuC2I CCSGG 3 cut(s) 620, 1011, 1012
AsuHPI GGTGA 5 cut(s) 785, 820, 1909, 2053, 2276
AvaI CYCGRG 4 cut(s) 67, 222, 1010, 1295
AvaII GGWCC 3 cut(s) 897, 1117, 2600
BaeGI GKGCMC 1 cut(s) 513
BalI TGGCCA 1 cut(s) 684
BamHI GGATCC 1 cut(s) 2551
BbsI GAAGAC 1 cut(s) 106
BbvI GCAGC 6 cut(s) 169, 535, 895, 980, 1629, 2080
BccI CCATC 9 cut(s) 43, 674, 709, 788, 1645, 1803, 2426, 2617, 2739
BceAI ACGGC 1 cut(s) 2081
BciT130I CCWGG 5 cut(s) 602, 686, 858, 1246, 2328
BciVI GTATCC 1 cut(s) 2672
BclI TGATCA 2 cut(s) 190, 1528
BcnI CCSGG 3 cut(s) 620, 1011, 1012
BcoDI GTCTC 3 cut(s) 813, 1572, 2817
BfaI CTAG 9 cut(s) 153, 531, 569, 1460, 2009, 2382, 2429, 2493, 2691
BfmI CTRYAG 2 cut(s) 431, 2844
BfuI GTATCC 1 cut(s) 2672
BglII AGATCT 2 cut(s) 990, 2528
BisI GCNGC 7 cut(s) 6, 183, 549, 909, 969, 1643, 2069
BlsI GCNGC 7 cut(s) 7, 184, 550, 910, 970, 1644, 2070
BmcAI AGTACT 4 cut(s) 380, 1593, 2356, 2850
Bme1390I CCNGG 8 cut(s) 602, 620, 686, 858, 1011, 1012, 1246, 2328
Bme18I GGWCC 3 cut(s) 897, 1117, 2600
BmeT110I CYCGRG 4 cut(s) 67, 222, 1010, 1295
BmgT120I GGNCC 5 cut(s) 479, 788, 897, 1117, 2600
BmiI GGNNCC 7 cut(s) 85, 540, 789, 1118, 1119, 2236, 2553
BmrFI CCNGG 8 cut(s) 602, 620, 686, 858, 1011, 1012, 1246, 2328
BmsI GCATC 4 cut(s) 245, 535, 1988, 2058
BoxI GACNNNNGTC 1 cut(s) 895
BpiI GAAGAC 1 cut(s) 106
BpmI CTGGAG 1 cut(s) 966
Bpu10I CCTNAGC 1 cut(s) 1638
BpuEI CTTGAG 4 cut(s) 539, 731, 1572, 1973
BpuMI CCSGG 3 cut(s) 620, 1011, 1012
Bsa29I ATCGAT 2 cut(s) 248, 2098
BsaBI GATNNNNATC 1 cut(s) 1173
BsaI GGTCTC 1 cut(s) 1572
BsaXI ACNNNNNCTCC 4 cut(s) 810, 840, 2226, 2256
Bsc4I CCNNNNNNNGG 3 cut(s) 625, 626, 857
Bse1I ACTGG 6 cut(s) 365, 949, 1599, 1933, 2005, 2373
Bse3DI GCAATG 1 cut(s) 2406
Bse8I GATNNNNATC 1 cut(s) 1173
BseBI CCWGG 5 cut(s) 602, 686, 858, 1246, 2328
BseCI ATCGAT 2 cut(s) 248, 2098
BseGI GGATG 7 cut(s) 26, 236, 529, 1021, 1174, 1222, 2049
BseJI GATNNNNATC 1 cut(s) 1173
BseLI CCNNNNNNNGG 3 cut(s) 625, 626, 857
BseMI GCAATG 1 cut(s) 2406
BseMII CTCAG 7 cut(s) 33, 1392, 1593, 1629, 1698, 1758, 1878
BseNI ACTGG 6 cut(s) 365, 949, 1599, 1933, 2005, 2373
BseRI GAGGAG 3 cut(s) 831, 1391, 2599
BseSI GKGCMC 1 cut(s) 513
BseXI GCAGC 6 cut(s) 169, 535, 895, 980, 1629, 2080
BseYI CCCAGC 1 cut(s) 2343
BsgI GTGCAG 2 cut(s) 894, 1178
Bsh1236I CGCG 4 cut(s) 266, 329, 2186, 2250
Bsh1285I CGRYCG 1 cut(s) 2656
BshFI GGCC 6 cut(s) 147, 481, 684, 790, 1765, 2372
BshVI ATCGAT 2 cut(s) 248, 2098
BsiEI CGRYCG 1 cut(s) 2656
BsiHKCI CYCGRG 4 cut(s) 67, 222, 1010, 1295
BsiSI CCGG 2 cut(s) 620, 1011
BslFI GGGAC 4 cut(s) 833, 1130, 2109, 2326
BslI CCNNNNNNNGG 3 cut(s) 625, 626, 857
BsmAI GTCTC 3 cut(s) 813, 1572, 2817
BsmFI GGGAC 4 cut(s) 833, 1130, 2109, 2326
BsmI GAATGC 5 cut(s) 314, 985, 1188, 2180, 2708
BsnI GGCC 6 cut(s) 147, 481, 684, 790, 1765, 2372
Bso31I GGTCTC 1 cut(s) 1572
BsoBI CYCGRG 4 cut(s) 67, 222, 1010, 1295
Bsp1286I GDGCHC 1 cut(s) 513
Bsp1407I TGTACA 1 cut(s) 2035
Bsp19I CCATGG 2 cut(s) 725, 1023
Bsp68I TCGCGA 1 cut(s) 2186
BspACI CCGC 7 cut(s) 5, 266, 327, 329, 831, 2248, 2549
BspANI GGCC 6 cut(s) 147, 481, 684, 790, 1765, 2372
BspCNI CTCAG 7 cut(s) 32, 1393, 1594, 1630, 1699, 1759, 1879
BspDI ATCGAT 2 cut(s) 248, 2098
BspFNI CGCG 4 cut(s) 266, 329, 2186, 2250
BspHI TCATGA 1 cut(s) 2809
BspLI GGNNCC 7 cut(s) 85, 540, 789, 1118, 1119, 2236, 2553
BspPI GGATC 6 cut(s) 1425, 1628, 2546, 2559, 2635, 2843
BspTNI GGTCTC 1 cut(s) 1572
BsrDI GCAATG 1 cut(s) 2406
BsrGI TGTACA 1 cut(s) 2035
BsrI ACTGG 6 cut(s) 365, 949, 1599, 1933, 2005, 2373
BssNAI GTATAC 1 cut(s) 2414
BssT1I CCWWGG 5 cut(s) 309, 725, 957, 1023, 2153
Bst1107I GTATAC 1 cut(s) 2414
Bst2UI CCWGG 5 cut(s) 602, 686, 858, 1246, 2328
Bst4CI ACNGT 8 cut(s) 383, 894, 1267, 1288, 2340, 2559, 2654, 2801
Bst6I CTCTTC 2 cut(s) 1863, 2451
BstAPI GCANNNNNTGC 1 cut(s) 320
BstAUI TGTACA 1 cut(s) 2035
BstC8I GCNNGC 4 cut(s) 82, 405, 579, 933
BstDSI CCRYGG 5 cut(s) 327, 725, 1023, 1521, 2555
BstF5I GGATG 7 cut(s) 26, 236, 529, 1021, 1174, 1222, 2049
BstFNI CGCG 4 cut(s) 266, 329, 2186, 2250
BstHHI GCGC 2 cut(s) 1659, 2049
BstMAI GTCTC 3 cut(s) 813, 1572, 2817
BstMCI CGRYCG 1 cut(s) 2656
BstMWI GCNNNNNNNGC 5 cut(s) 320, 478, 574, 914, 968
BstNI CCWGG 5 cut(s) 602, 686, 858, 1246, 2328
BstNSI RCATGY 3 cut(s) 935, 1352, 1691
BstPAI GACNNNNGTC 1 cut(s) 895
BstSCI CCNGG 8 cut(s) 600, 618, 684, 856, 1009, 1010, 1244, 2326
BstSFI CTRYAG 2 cut(s) 431, 2844
BstSLI GKGCMC 1 cut(s) 513
BstUI CGCG 4 cut(s) 266, 329, 2186, 2250
BstV1I GCAGC 6 cut(s) 169, 535, 895, 980, 1629, 2080
BstV2I GAAGAC 1 cut(s) 106
BstX2I RGATCY 6 cut(s) 990, 1417, 1633, 2528, 2551, 2627
BstYI RGATCY 6 cut(s) 990, 1417, 1633, 2528, 2551, 2627
BstZ17I GTATAC 1 cut(s) 2414
Bsu15I ATCGAT 2 cut(s) 248, 2098
BsuI GTATCC 1 cut(s) 2672
BsuRI GGCC 6 cut(s) 147, 481, 684, 790, 1765, 2372
BsuTUI ATCGAT 2 cut(s) 248, 2098
BtgI CCRYGG 5 cut(s) 327, 725, 1023, 1521, 2555
BtgZI GCGATG 1 cut(s) 2039
BtsCI GGATG 7 cut(s) 26, 236, 529, 1021, 1174, 1222, 2049
BtsI GCAGTG 2 cut(s) 1161, 2800
BtsIMutI CAGTG 7 cut(s) 942, 1161, 1566, 1599, 2223, 2380, 2800
BtuMI TCGCGA 1 cut(s) 2186
Cac8I GCNNGC 4 cut(s) 82, 405, 579, 933
CaiI CAGNNNCTG 2 cut(s) 548, 1637
CciI TCATGA 1 cut(s) 2809
CfoI GCGC 2 cut(s) 1659, 2049
Cfr13I GGNCC 5 cut(s) 479, 788, 897, 1117, 2600
Cfr42I CCGCGG 1 cut(s) 330
Cfr9I CCCGGG 1 cut(s) 1010
ClaI ATCGAT 2 cut(s) 248, 2098
Csp6I GTAC 7 cut(s) 379, 1006, 1592, 2036, 2355, 2802, 2849
CspCI CAANNNNNGTGG 2 cut(s) 2526, 2561
CviQI GTAC 7 cut(s) 379, 1006, 1592, 2036, 2355, 2802, 2849
DraI TTTAAA 1 cut(s) 1320
DrdI GACNNNNNNGTC 1 cut(s) 2755
DseDI GACNNNNNNGTC 1 cut(s) 2755
EaeI YGGCCR 2 cut(s) 145, 682
Eam1104I CTCTTC 2 cut(s) 1863, 2451
EarI CTCTTC 2 cut(s) 1863, 2451
EciI GGCGGA 1 cut(s) 2564
Eco130I CCWWGG 5 cut(s) 309, 725, 957, 1023, 2153
Eco31I GGTCTC 1 cut(s) 1572
Eco47I GGWCC 3 cut(s) 897, 1117, 2600
Eco57I CTGAAG 2 cut(s) 2520, 2553
Eco88I CYCGRG 4 cut(s) 67, 222, 1010, 1295
EcoO109I RGGNCCY 2 cut(s) 479, 1117
EcoRI GAATTC 2 cut(s) 269, 1455
EcoRII CCWGG 5 cut(s) 600, 684, 856, 1244, 2326
EcoT14I CCWWGG 5 cut(s) 309, 725, 957, 1023, 2153
ErhI CCWWGG 5 cut(s) 309, 725, 957, 1023, 2153
FaqI GGGAC 4 cut(s) 833, 1130, 2109, 2326
FauNDI CATATG 5 cut(s) 373, 964, 2191, 2578, 2828
FbaI TGATCA 2 cut(s) 190, 1528
FblI GTMKAC 2 cut(s) 1840, 2413
Fnu4HI GCNGC 7 cut(s) 6, 183, 549, 909, 969, 1643, 2069
FokI GGATG 7 cut(s) 13, 223, 536, 1028, 1161, 1229, 2036
Fsp4HI GCNGC 7 cut(s) 6, 183, 549, 909, 969, 1643, 2069
FspAI RTGCGCAY 1 cut(s) 1658
FspBI CTAG 9 cut(s) 153, 531, 569, 1460, 2009, 2382, 2429, 2493, 2691
FspI TGCGCA 1 cut(s) 1658
GlaI GCGC 2 cut(s) 1658, 2048
GluI GCNGC 7 cut(s) 6, 183, 549, 909, 969, 1643, 2069
GsaI CCCAGC 1 cut(s) 2347
GsuI CTGGAG 1 cut(s) 966
HaeIII GGCC 6 cut(s) 147, 481, 684, 790, 1765, 2372
HapII CCGG 2 cut(s) 620, 1011
HhaI GCGC 2 cut(s) 1659, 2049
Hin6I GCGC 2 cut(s) 1657, 2047
HinP1I GCGC 2 cut(s) 1657, 2047
HincII GTYRAC 1 cut(s) 2014
HindII GTYRAC 1 cut(s) 2014
HindIII AAGCTT 1 cut(s) 503
HinfI GANTC 8 cut(s) 230, 293, 596, 1481, 1538, 1711, 1813, 2122
HpaII CCGG 2 cut(s) 620, 1011
HphI GGTGA 5 cut(s) 785, 820, 1909, 2053, 2276
Hpy166II GTNNAC 8 cut(s) 900, 1685, 1841, 1900, 2014, 2245, 2336, 2414
Hpy188I TCNGA 4 cut(s) 1510, 1549, 1939, 2533
Hpy8I GTNNAC 8 cut(s) 900, 1685, 1841, 1900, 2014, 2245, 2336, 2414
HpyCH4III ACNGT 8 cut(s) 383, 894, 1267, 1288, 2340, 2559, 2654, 2801
HpyCH4IV ACGT 3 cut(s) 59, 213, 1096
HpyF10VI GCNNNNNNNGC 5 cut(s) 320, 478, 574, 914, 968
HpySE526I ACGT 3 cut(s) 59, 213, 1096
HspAI GCGC 2 cut(s) 1657, 2047
KflI GGGWCCC 1 cut(s) 1117
Ksp22I TGATCA 2 cut(s) 190, 1528
KspI CCGCGG 1 cut(s) 330
LmnI GCTCC 6 cut(s) 89, 469, 1378, 1503, 1523, 2234
Lsp1109I GCAGC 6 cut(s) 169, 535, 895, 980, 1629, 2080
LweI GCATC 4 cut(s) 245, 535, 1988, 2058
MaeI CTAG 9 cut(s) 153, 531, 569, 1460, 2009, 2382, 2429, 2493, 2691
MaeII ACGT 3 cut(s) 59, 213, 1096
MaeIII GTNAC 8 cut(s) 748, 826, 995, 1252, 1618, 1795, 2648, 2795
MfeI CAATTG 1 cut(s) 456
MflI RGATCY 6 cut(s) 990, 1417, 1633, 2528, 2551, 2627
MhlI GDGCHC 1 cut(s) 513
MlsI TGGCCA 1 cut(s) 684
MluNI TGGCCA 1 cut(s) 684
MlyI GAGTC 4 cut(s) 590, 1475, 1547, 2131
MmeI TCCRAC 6 cut(s) 111, 793, 1202, 2212, 2443, 2656
Mox20I TGGCCA 1 cut(s) 684
MroXI GAANNNNTTC 3 cut(s) 103, 1137, 2180
MscI TGGCCA 1 cut(s) 684
MseI TTAA 6 cut(s) 357, 449, 660, 1319, 1743, 1971
MslI CAYNNNNRTG 2 cut(s) 1364, 2814
Msp20I TGGCCA 1 cut(s) 684
MspA1I CMGCKG 3 cut(s) 329, 833, 2774
MspI CCGG 2 cut(s) 620, 1011
MspR9I CCNGG 8 cut(s) 602, 620, 686, 858, 1011, 1012, 1246, 2328
MunI CAATTG 1 cut(s) 456
Mva1269I GAATGC 5 cut(s) 314, 985, 1188, 2180, 2708
MvaI CCWGG 5 cut(s) 602, 686, 858, 1246, 2328
MvnI CGCG 4 cut(s) 266, 329, 2186, 2250
MwoI GCNNNNNNNGC 5 cut(s) 320, 478, 574, 914, 968
NciI CCSGG 3 cut(s) 620, 1011, 1012
NcoI CCATGG 2 cut(s) 725, 1023
NdeI CATATG 5 cut(s) 373, 964, 2191, 2578, 2828
NlaIV GGNNCC 7 cut(s) 85, 540, 789, 1118, 1119, 2236, 2553
NmeAIII GCCGAG 1 cut(s) 173
NmuCI GTSAC 2 cut(s) 826, 2795
NruI TCGCGA 1 cut(s) 2186
NsbI TGCGCA 1 cut(s) 1658
NspI RCATGY 3 cut(s) 935, 1352, 1691
PaeI GCATGC 1 cut(s) 935
PaeR7I CTCGAG 1 cut(s) 67
PagI TCATGA 1 cut(s) 2809
PciI ACATGT 1 cut(s) 1348
PcsI WCGNNNNNNNCGW 1 cut(s) 65
PctI GAATGC 5 cut(s) 314, 985, 1188, 2180, 2708
PdmI GAANNNNTTC 3 cut(s) 103, 1137, 2180
PfeI GAWTC 4 cut(s) 230, 293, 1711, 1813
PflFI GACNNNGTC 3 cut(s) 824, 1484, 2714
PkrI GCNGC 7 cut(s) 7, 184, 550, 910, 970, 1644, 2070
PleI GAGTC 4 cut(s) 590, 1475, 1546, 2130
PpsI GAGTC 4 cut(s) 590, 1475, 1546, 2130
PpuMI RGGWCCY 1 cut(s) 1117
PscI ACATGT 1 cut(s) 1348
PshAI GACNNNNGTC 1 cut(s) 895
PsiI TTATAA 1 cut(s) 1847
Psp5II RGGWCCY 1 cut(s) 1117
Psp6I CCWGG 5 cut(s) 600, 684, 856, 1244, 2326
PspFI CCCAGC 1 cut(s) 2343
PspGI CCWGG 5 cut(s) 600, 684, 856, 1244, 2326
PspN4I GGNNCC 7 cut(s) 85, 540, 789, 1118, 1119, 2236, 2553
PspPI GGNCC 5 cut(s) 479, 788, 897, 1117, 2600
PspPPI RGGWCCY 1 cut(s) 1117
PsrI GAACNNNNNNTAC 1 cut(s) 2832
PstNI CAGNNNCTG 2 cut(s) 548, 1637
PsuI RGATCY 6 cut(s) 990, 1417, 1633, 2528, 2551, 2627
PsyI GACNNNGTC 3 cut(s) 824, 1484, 2714
PvuII CAGCTG 1 cut(s) 2774
RruI TCGCGA 1 cut(s) 2186
RsaI GTAC 7 cut(s) 380, 1007, 1593, 2037, 2356, 2803, 2850
RsaNI GTAC 7 cut(s) 379, 1006, 1592, 2036, 2355, 2802, 2849
RseI CAYNNNNRTG 2 cut(s) 1364, 2814
SacII CCGCGG 1 cut(s) 330
SaqAI TTAA 6 cut(s) 357, 449, 660, 1319, 1743, 1971
SatI GCNGC 7 cut(s) 6, 183, 549, 909, 969, 1643, 2069
Sau96I GGNCC 5 cut(s) 479, 788, 897, 1117, 2600
ScaI AGTACT 4 cut(s) 380, 1593, 2356, 2850
SchI GAGTC 4 cut(s) 590, 1475, 1547, 2131
ScrFI CCNGG 8 cut(s) 602, 620, 686, 858, 1011, 1012, 1246, 2328
SduI GDGCHC 1 cut(s) 513
SfaNI GCATC 4 cut(s) 245, 535, 1988, 2058
SfcI CTRYAG 2 cut(s) 431, 2844
Sfr274I CTCGAG 1 cut(s) 67
Sfr303I CCGCGG 1 cut(s) 330
SgrBI CCGCGG 1 cut(s) 330
SinI GGWCC 3 cut(s) 897, 1117, 2600
SlaI CTCGAG 1 cut(s) 67
SmaI CCCGGG 1 cut(s) 1012
SmiMI CAYNNNNRTG 2 cut(s) 1364, 2814
SmlI CTYRAG 5 cut(s) 67, 518, 710, 1587, 1988
SmoI CTYRAG 5 cut(s) 67, 518, 710, 1587, 1988
SphI GCATGC 1 cut(s) 935
SsiI CCGC 7 cut(s) 5, 266, 327, 329, 831, 2248, 2549
SspI AATATT 1 cut(s) 1209
SspMI CTAG 9 cut(s) 153, 531, 569, 1460, 2009, 2382, 2429, 2493, 2691
StyD4I CCNGG 8 cut(s) 600, 618, 684, 856, 1009, 1010, 1244, 2326
StyI CCWWGG 5 cut(s) 309, 725, 957, 1023, 2153
TaaI ACNGT 8 cut(s) 383, 894, 1267, 1288, 2340, 2559, 2654, 2801
TaiI ACGT 3 cut(s) 62, 216, 1099
TaqII GACCGA 1 cut(s) 2588
TatI WGTACW 5 cut(s) 378, 1591, 2035, 2354, 2848
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 4 cut(s) 230, 293, 1711, 1813
Tru1I TTAA 6 cut(s) 357, 449, 660, 1319, 1743, 1971
Tru9I TTAA 6 cut(s) 357, 449, 660, 1319, 1743, 1971
TscAI CASTG 7 cut(s) 949, 1161, 1573, 1606, 2230, 2380, 2800
TseFI GTSAC 2 cut(s) 826, 2795
TseI GCWGC 6 cut(s) 182, 548, 908, 968, 1642, 2068
Tsp45I GTSAC 2 cut(s) 826, 2795
TspGWI ACGGA 2 cut(s) 1427, 1510
TspMI CCCGGG 1 cut(s) 1010
TspRI CASTG 7 cut(s) 949, 1161, 1573, 1606, 2230, 2380, 2800
Tth111I GACNNNGTC 3 cut(s) 824, 1484, 2714
VpaK11BI GGWCC 3 cut(s) 897, 1117, 2600
XbaI TCTAGA 2 cut(s) 1459, 2428
XceI RCATGY 3 cut(s) 935, 1352, 1691
XhoI CTCGAG 1 cut(s) 67
XmaI CCCGGG 1 cut(s) 1010
XmiI GTMKAC 2 cut(s) 1840, 2413
XmnI GAANNNNTTC 3 cut(s) 103, 1137, 2180
XspI CTAG 9 cut(s) 153, 531, 569, 1460, 2009, 2382, 2429, 2493, 2691
ZrmI AGTACT 4 cut(s) 380, 1593, 2356, 2850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.