MD10G1333300.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
41061261 .. 41064387
3127 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1333300.v1.1.491

Sequence Viewer

Length: 1761 bp
ATGTTAATTGTTCTTGCAGACCATTCCTTGTTTATTAATTGTGGTGGTGAAGAGACAACTGTTCTTGGGAATATATATGATCAAGATAATGACACATCCCCCTCTTACACAAGTCCAAATAAAAACTGGGCTTACAGCCTTTCCGGAGACTGGCTTGTACCAAACAGTAATGGCAGTGATTACATCAAGAGCACGACACGTGGAGTTTCCATTACTGAGGCACCCCTGTATGAAAAAGCTCGTCTGTCCGCGGTATCTCTCAAGTATTATGCTTTTTGTCTGCGCAAAGGCAATTATACTGTGACGCTTTATTTCAAAGAAGTTGTATACACTGATGATGCAAACTATACTAGTCTAAGAAAACGTGTATTTGATATATATATTCAGGGTAACAGGACAGAAAATTATTTCGACATTATAGACAAGGCGGGCAATGGAGAAAAACCGATAACTGTAAATCATTCAGTCGAGGTTGCACATGATAGTGATACGTTAGAGATCCACTTGTACTGGCCTGGAAAGGGGTCTACTGGTTACCGACCTAGTTTTAATGGACCTCTAATATCAGCTATTTCTGTGAATCCTGAGTTTGAAATTAATCCCGACAAACTAAAAGGTCAACGTGTTGCATTGATTACGATTGCTTCAATTGTTGCTGCTCTGCTGCTTTTATTGGCTTTTGCTTGGAGGATGGGGTGGCTGACAAGCAAAGAGGTCCACAAGATCAAAATAGGTGTAGAAAAAATAGATGACGAGCTTCAAGATAAATTTGTCACCATCAAAGAATTAATAAAGGCTACTGAAAATTTTAGCGACAAAAAAAAACTTGGACGTTATGGGACAGTTTATAAGGCAAAACTGCAAGGTCACATTGTGGCCGTGAAGAAACTAGATCCCGCTCAATTTAAGAAAAAAATTGAAGACCTGAACAAGGAAATTGGCACCATAAGGTCATTACAACACCAAAATATCCTCCAACTGTTGGATGGTTTTTTTGATAAAGACCTCCAACTTCTTGTTTACGAGTATATGGAAAAGCAATCCCTTGCCGATATCTTATTTGGCTCGAATACTTCTAGCACATTCAAGCTTGAATGGAATACAAGGGTTAACATTTGCTTGGGAATAGCAAAGGGTTTGAATTATCTACATGAGCATCCGAGAGTACAGATTCTTCATAGGAATATAAAATCCGCTAATATTCTTCTTAATGAAAATTTTGAGCCTAAGATATCTGACTTTGGATTTGCAAGTCTTTATACCAAAGAAGATAAGGTTAAGGTCATCACAAGAGAAGTTCCGAAAGGCTACATGGCGCCAGAGTGTTACCTTGAAACAAATGATATAACGTACAAAGCAGATGTTTACAGCTTTGGGGTGGTCATGCTTGAAATTGTTAGTGGGAAGAGAAACATATTGAGCAAACCAAACGAGGAAACTCAGGTTCTTTTAGATAGGGCTTATCAAGCACTTGCCGAAGGAAATTTGAAGAGCTTGGTTGATAAAAGTTTGTCTAAATATGATGAAAAAGAAGCCCTCGTCATTATGAAATTAGCAGTGTATTGCACCACTCTAGGTCCTAGTGTCAGACCTAAAATGTCTGAAGTTGTGAGTGTTCTTGTTCGCGAAAAAACCCTTGACGAGGTTTTTCCACCCGCCAAGCTCACTGGCGATGGCAATGTTGCTGGTTCCACCTCTTTGGGGAAGACTTCAGCAGCATCAACTTCGTCTAATGATCACGGGAAAGTATTTCTAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

587

Amino Acids

65.71

Weight (kDa)

7.16

Isoelectric Point (pI)

29.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 9 - 191 1.3e-28 Malectin domain
Pkinase PF00069 277 - 536 2.7e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 277 - 539 8.8e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 849
Acc16I TGCGCA 1 cut(s) 284
AccB1I GGYRCC 3 cut(s) 220, 941, 1315
AccB7I CCANNNNNTGG 1 cut(s) 982
AccBSI CCGCTC 1 cut(s) 899
AccI GTMKAC 2 cut(s) 327, 527
AccII CGCG 2 cut(s) 251, 1626
AccIII TCCGGA 1 cut(s) 143
AciI CCGC 6 cut(s) 249, 251, 428, 897, 1194, 1656
AclWI GGATC 2 cut(s) 493, 887
AcoI YGGCCR 1 cut(s) 876
AcsI RAATTY 4 cut(s) 767, 805, 1216, 1483
AcuI CTGAAG 2 cut(s) 1623, 1695
AcvI CACGTG 1 cut(s) 200
AcyI GRCGYC 1 cut(s) 1316
AdeI CACNNNGTG 1 cut(s) 874
AfaI GTAC 4 cut(s) 159, 509, 1167, 1352
AfiI CCNNNNNNNGG 6 cut(s) 150, 521, 931, 982, 1642, 1701
AflIII ACRYGT 3 cut(s) 197, 364, 622
AhlI ACTAGT 1 cut(s) 350
AjnI CCWGG 1 cut(s) 514
AluBI AGCT 7 cut(s) 239, 569, 757, 1090, 1371, 1494, 1663
AluI AGCT 7 cut(s) 239, 569, 757, 1090, 1371, 1494, 1663
Alw21I GWGCWC 1 cut(s) 194
Alw26I GTCTC 2 cut(s) 47, 141
AlwI GGATC 2 cut(s) 493, 887
Aor13HI TCCGGA 1 cut(s) 143
AoxI GGCC 2 cut(s) 512, 876
ApeKI GCWGC 3 cut(s) 656, 664, 1715
ApoI RAATTY 4 cut(s) 767, 805, 1216, 1483
ArsI GACNNNNNNTTYG 2 cut(s) 1229, 1261
AseI ATTAAT 3 cut(s) 36, 597, 788
AspLEI GCGC 2 cut(s) 285, 1318
AspS9I GGNCC 3 cut(s) 554, 715, 1577
AsuHPI GGTGA 2 cut(s) 59, 766
AvaII GGWCC 3 cut(s) 554, 715, 1577
BanI GGYRCC 3 cut(s) 220, 941, 1315
BarI GAAGNNNNNNTAC 2 cut(s) 1158, 1190
BbrPI CACGTG 1 cut(s) 200
BbsI GAAGAC 2 cut(s) 927, 1712
Bbv12I GWGCWC 1 cut(s) 194
BbvI GCAGC 3 cut(s) 643, 651, 1727
BccI CCATC 4 cut(s) 685, 785, 980, 1667
BceAI ACGGC 1 cut(s) 863
BcgI CGANNNNNNTGC 2 cut(s) 1707, 1741
BciT130I CCWGG 1 cut(s) 516
BclI TGATCA 2 cut(s) 79, 1735
BcoDI GTCTC 2 cut(s) 47, 141
BcuI ACTAGT 1 cut(s) 350
BfaI CTAG 7 cut(s) 351, 543, 890, 1077, 1574, 1581, 1754
BfoI RGCGCY 1 cut(s) 1319
BisI GCNGC 3 cut(s) 657, 665, 1716
BlsI GCNGC 3 cut(s) 658, 666, 1717
Bme1390I CCNGG 1 cut(s) 516
Bme18I GGWCC 3 cut(s) 554, 715, 1577
BmgT120I GGNCC 3 cut(s) 554, 715, 1577
BmiI GGNNCC 4 cut(s) 222, 943, 1317, 1690
BmrFI CCNGG 1 cut(s) 516
BmrI ACTGGG 1 cut(s) 136
BmsI GCATC 3 cut(s) 328, 1165, 1727
BmuI ACTGGG 1 cut(s) 136
BpiI GAAGAC 2 cut(s) 927, 1712
BpuEI CTTGAG 1 cut(s) 245
BsaAI YACGTR 1 cut(s) 200
BsaHI GRCGYC 1 cut(s) 1316
BsaJI CCNNGG 1 cut(s) 249
BsaWI WCCGGW 1 cut(s) 143
Bsc4I CCNNNNNNNGG 6 cut(s) 150, 521, 931, 982, 1642, 1701
Bse1I ACTGG 5 cut(s) 131, 155, 515, 535, 1672
Bse3DI GCAATG 2 cut(s) 439, 1684
BseAI TCCGGA 1 cut(s) 143
BseBI CCWGG 1 cut(s) 516
BseDI CCNNGG 1 cut(s) 249
BseGI GGATG 4 cut(s) 95, 696, 991, 1156
BseLI CCNNNNNNNGG 6 cut(s) 150, 521, 931, 982, 1642, 1701
BseMI GCAATG 2 cut(s) 439, 1684
BseMII CTCAG 3 cut(s) 207, 576, 1454
BseNI ACTGG 5 cut(s) 131, 155, 515, 535, 1672
BseXI GCAGC 3 cut(s) 643, 651, 1727
Bsh1236I CGCG 2 cut(s) 251, 1626
BshFI GGCC 2 cut(s) 514, 878
BshNI GGYRCC 3 cut(s) 220, 941, 1315
BsiHKAI GWGCWC 1 cut(s) 194
BsiSI CCGG 1 cut(s) 144
BslFI GGGAC 1 cut(s) 853
BslI CCNNNNNNNGG 6 cut(s) 150, 521, 931, 982, 1642, 1701
BsmAI GTCTC 2 cut(s) 47, 141
BsmFI GGGAC 1 cut(s) 853
BsnI GGCC 2 cut(s) 514, 878
Bsp1286I GDGCHC 1 cut(s) 194
Bsp13I TCCGGA 1 cut(s) 143
Bsp143I GATC 5 cut(s) 79, 498, 723, 892, 1735
Bsp68I TCGCGA 1 cut(s) 1626
BspACI CCGC 6 cut(s) 249, 251, 428, 897, 1194, 1656
BspANI GGCC 2 cut(s) 514, 878
BspCNI CTCAG 3 cut(s) 208, 577, 1453
BspEI TCCGGA 1 cut(s) 143
BspFNI CGCG 2 cut(s) 251, 1626
BspLI GGNNCC 4 cut(s) 222, 943, 1317, 1690
BspPI GGATC 2 cut(s) 493, 887
BspQI GCTCTTC 1 cut(s) 1484
BspT107I GGYRCC 3 cut(s) 220, 941, 1315
BsrBI CCGCTC 1 cut(s) 899
BsrDI GCAATG 2 cut(s) 439, 1684
BsrI ACTGG 5 cut(s) 131, 155, 515, 535, 1672
BssECI CCNNGG 1 cut(s) 249
BssMI GATC 5 cut(s) 79, 498, 723, 892, 1735
BssNAI GTATAC 1 cut(s) 328
BssNI GRCGYC 1 cut(s) 1316
Bst1107I GTATAC 1 cut(s) 328
Bst2UI CCWGG 1 cut(s) 516
Bst4CI ACNGT 6 cut(s) 61, 167, 301, 454, 844, 981
Bst6I CTCTTC 3 cut(s) 45, 1400, 1484
BstACI GRCGYC 1 cut(s) 1316
BstBAI YACGTR 1 cut(s) 200
BstC8I GCNNGC 1 cut(s) 430
BstDEI CTNAG 5 cut(s) 216, 356, 585, 1227, 1440
BstDSI CCRYGG 1 cut(s) 249
BstEII GGTNACC 1 cut(s) 533
BstENI CCTNNNNNAGG 2 cut(s) 929, 1640
BstF5I GGATG 4 cut(s) 95, 696, 991, 1156
BstFNI CGCG 2 cut(s) 251, 1626
BstH2I RGCGCY 1 cut(s) 1319
BstHHI GCGC 2 cut(s) 285, 1318
BstKTI GATC 5 cut(s) 82, 501, 726, 895, 1738
BstMAI GTCTC 2 cut(s) 47, 141
BstMBI GATC 5 cut(s) 79, 498, 723, 892, 1735
BstMWI GCNNNNNNNGC 1 cut(s) 1466
BstNI CCWGG 1 cut(s) 516
BstPI GGTNACC 1 cut(s) 533
BstSCI CCNGG 1 cut(s) 514
BstUI CGCG 2 cut(s) 251, 1626
BstV1I GCAGC 3 cut(s) 643, 651, 1727
BstV2I GAAGAC 2 cut(s) 927, 1712
BstX2I RGATCY 2 cut(s) 498, 892
BstXI CCANNNNNNTGG 1 cut(s) 1699
BstYI RGATCY 2 cut(s) 498, 892
BstZ17I GTATAC 1 cut(s) 328
BsuRI GGCC 2 cut(s) 514, 878
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 1686
BtsCI GGATG 4 cut(s) 95, 696, 991, 1156
BtsI GCAGTG 2 cut(s) 181, 1563
BtsIMutI CAGTG 4 cut(s) 181, 330, 1563, 1665
BtuMI TCGCGA 1 cut(s) 1626
Cac8I GCNNGC 1 cut(s) 430
CfoI GCGC 2 cut(s) 285, 1318
Cfr13I GGNCC 3 cut(s) 554, 715, 1577
Cfr42I CCGCGG 1 cut(s) 252
CseI GACGC 1 cut(s) 313
Csp6I GTAC 4 cut(s) 158, 508, 1166, 1351
CviAII CATG 4 cut(s) 479, 1151, 1312, 1384
CviQI GTAC 4 cut(s) 158, 508, 1166, 1351
DdeI CTNAG 5 cut(s) 216, 356, 585, 1227, 1440
DinI GGCGCC 1 cut(s) 1317
DpnI GATC 5 cut(s) 81, 500, 725, 894, 1737
DpnII GATC 5 cut(s) 79, 498, 723, 892, 1735
DraIII CACNNNGTG 1 cut(s) 874
EaeI YGGCCR 1 cut(s) 876
Eam1104I CTCTTC 3 cut(s) 45, 1400, 1484
EarI CTCTTC 3 cut(s) 45, 1400, 1484
Eco32I GATATC 2 cut(s) 1054, 1233
Eco47I GGWCC 3 cut(s) 554, 715, 1577
Eco57I CTGAAG 2 cut(s) 1623, 1695
Eco72I CACGTG 1 cut(s) 200
Eco91I GGTNACC 1 cut(s) 533
EcoNI CCTNNNNNAGG 2 cut(s) 929, 1640
EcoO109I RGGNCCY 1 cut(s) 1577
EcoO65I GGTNACC 1 cut(s) 533
EcoRII CCWGG 1 cut(s) 514
EcoRV GATATC 2 cut(s) 1054, 1233
EgeI GGCGCC 1 cut(s) 1317
EheI GGCGCC 1 cut(s) 1317
FaeI CATG 4 cut(s) 482, 1154, 1315, 1387
FaqI GGGAC 1 cut(s) 853
FatI CATG 4 cut(s) 478, 1150, 1311, 1383
FauI CCCGC 3 cut(s) 421, 904, 1663
FbaI TGATCA 2 cut(s) 79, 1735
FblI GTMKAC 2 cut(s) 327, 527
Fnu4HI GCNGC 3 cut(s) 657, 665, 1716
FokI GGATG 4 cut(s) 82, 703, 998, 1143
Fsp4HI GCNGC 3 cut(s) 657, 665, 1716
FspBI CTAG 7 cut(s) 351, 543, 890, 1077, 1574, 1581, 1754
FspI TGCGCA 1 cut(s) 284
GlaI GCGC 2 cut(s) 284, 1317
GluI GCNGC 3 cut(s) 657, 665, 1716
HaeII RGCGCY 1 cut(s) 1319
HaeIII GGCC 2 cut(s) 514, 878
HapII CCGG 1 cut(s) 144
HgaI GACGC 1 cut(s) 313
HhaI GCGC 2 cut(s) 285, 1318
Hin1I GRCGYC 1 cut(s) 1316
Hin1II CATG 4 cut(s) 482, 1154, 1315, 1387
Hin6I GCGC 2 cut(s) 283, 1316
HinP1I GCGC 2 cut(s) 283, 1316
HincII GTYRAC 2 cut(s) 620, 1111
HindII GTYRAC 2 cut(s) 620, 1111
HindIII AAGCTT 1 cut(s) 1088
HinfI GANTC 2 cut(s) 580, 1171
HpaI GTTAAC 1 cut(s) 1111
HpaII CCGG 1 cut(s) 144
HphI GGTGA 2 cut(s) 59, 766
Hpy166II GTNNAC 7 cut(s) 328, 528, 620, 718, 1021, 1111, 1366
Hpy188I TCNGA 5 cut(s) 1161, 1237, 1302, 1589, 1603
Hpy188III TCNNGA 8 cut(s) 83, 144, 187, 584, 602, 761, 1625, 1754
Hpy8I GTNNAC 7 cut(s) 328, 528, 620, 718, 1021, 1111, 1366
HpyAV CCTTC 1 cut(s) 1472
HpyCH4III ACNGT 6 cut(s) 61, 167, 301, 454, 844, 981
HpyCH4IV ACGT 6 cut(s) 199, 364, 491, 622, 832, 1349
HpyCH4V TGCA 7 cut(s) 17, 341, 476, 629, 862, 1250, 1566
HpyF10VI GCNNNNNNNGC 1 cut(s) 1466
HpyF3I CTNAG 5 cut(s) 216, 356, 585, 1227, 1440
HpySE526I ACGT 6 cut(s) 199, 364, 491, 622, 832, 1349
Hsp92I GRCGYC 1 cut(s) 1316
Hsp92II CATG 4 cut(s) 482, 1154, 1315, 1387
HspAI GCGC 2 cut(s) 283, 1316
KasI GGCGCC 1 cut(s) 1315
Kpn2I TCCGGA 1 cut(s) 143
Ksp22I TGATCA 2 cut(s) 79, 1735
KspAI GTTAAC 1 cut(s) 1111
KspI CCGCGG 1 cut(s) 252
Kzo9I GATC 5 cut(s) 79, 498, 723, 892, 1735
LguI GCTCTTC 1 cut(s) 1484
Lsp1109I GCAGC 3 cut(s) 643, 651, 1727
LweI GCATC 3 cut(s) 328, 1165, 1727
MaeI CTAG 7 cut(s) 351, 543, 890, 1077, 1574, 1581, 1754
MaeII ACGT 6 cut(s) 199, 364, 491, 622, 832, 1349
MaeIII GTNAC 6 cut(s) 301, 389, 533, 772, 866, 1325
MalI GATC 5 cut(s) 81, 500, 725, 894, 1737
MbiI CCGCTC 1 cut(s) 899
MboI GATC 5 cut(s) 79, 498, 723, 892, 1735
MboII GAAGA 9 cut(s) 62, 895, 932, 1166, 1196, 1280, 1417, 1501, 1717
MfeI CAATTG 1 cut(s) 648
MflI RGATCY 2 cut(s) 498, 892
MhlI GDGCHC 1 cut(s) 194
Mly113I GGCGCC 1 cut(s) 1316
MmeI TCCRAC 3 cut(s) 963, 1000, 1033
MroI TCCGGA 1 cut(s) 143
MseI TTAA 9 cut(s) 5, 36, 549, 597, 788, 906, 1110, 1209, 1278
MslI CAYNNNNRTG 1 cut(s) 483
MspA1I CMGCKG 1 cut(s) 251
MspI CCGG 1 cut(s) 144
MspR9I CCNGG 1 cut(s) 516
MunI CAATTG 1 cut(s) 648
MvaI CCWGG 1 cut(s) 516
MvnI CGCG 2 cut(s) 251, 1626
MwoI GCNNNNNNNGC 1 cut(s) 1466
NarI GGCGCC 1 cut(s) 1316
NdeII GATC 5 cut(s) 79, 498, 723, 892, 1735
NlaIII CATG 4 cut(s) 482, 1154, 1315, 1387
NlaIV GGNNCC 4 cut(s) 222, 943, 1317, 1690
NmuCI GTSAC 3 cut(s) 301, 772, 866
NruI TCGCGA 1 cut(s) 1626
NsbI TGCGCA 1 cut(s) 284
PciSI GCTCTTC 1 cut(s) 1484
PfeI GAWTC 2 cut(s) 580, 1171
PflMI CCANNNNNTGG 1 cut(s) 982
PkrI GCNGC 3 cut(s) 658, 666, 1717
PluTI GGCGCC 1 cut(s) 1319
PmaCI CACGTG 1 cut(s) 200
PmlI CACGTG 1 cut(s) 200
Ppu21I YACGTR 1 cut(s) 200
PpuMI RGGWCCY 1 cut(s) 1577
PshBI ATTAAT 3 cut(s) 36, 597, 788
PsiI TTATAA 1 cut(s) 849
Psp5II RGGWCCY 1 cut(s) 1577
Psp6I CCWGG 1 cut(s) 514
PspCI CACGTG 1 cut(s) 200
PspEI GGTNACC 1 cut(s) 533
PspGI CCWGG 1 cut(s) 514
PspN4I GGNNCC 4 cut(s) 222, 943, 1317, 1690
PspPI GGNCC 3 cut(s) 554, 715, 1577
PspPPI RGGWCCY 1 cut(s) 1577
PsuI RGATCY 2 cut(s) 498, 892
RruI TCGCGA 1 cut(s) 1626
RsaI GTAC 4 cut(s) 159, 509, 1167, 1352
RsaNI GTAC 4 cut(s) 158, 508, 1166, 1351
RseI CAYNNNNRTG 1 cut(s) 483
SacII CCGCGG 1 cut(s) 252
SapI GCTCTTC 1 cut(s) 1484
SaqAI TTAA 9 cut(s) 5, 36, 549, 597, 788, 906, 1110, 1209, 1278
SatI GCNGC 3 cut(s) 657, 665, 1716
Sau3AI GATC 5 cut(s) 79, 498, 723, 892, 1735
Sau96I GGNCC 3 cut(s) 554, 715, 1577
ScrFI CCNGG 1 cut(s) 516
SduI GDGCHC 1 cut(s) 194
SfaNI GCATC 3 cut(s) 328, 1165, 1727
SfoI GGCGCC 1 cut(s) 1317
Sfr303I CCGCGG 1 cut(s) 252
SgrBI CCGCGG 1 cut(s) 252
SinI GGWCC 3 cut(s) 554, 715, 1577
SmiMI CAYNNNNRTG 1 cut(s) 483
SmlI CTYRAG 1 cut(s) 260
SmoI CTYRAG 1 cut(s) 260
SpeI ACTAGT 1 cut(s) 350
SsiI CCGC 6 cut(s) 249, 251, 428, 897, 1194, 1656
SspDI GGCGCC 1 cut(s) 1315
SspI AATATT 1 cut(s) 1201
SspMI CTAG 7 cut(s) 351, 543, 890, 1077, 1574, 1581, 1754
StyD4I CCNGG 1 cut(s) 514
TaaI ACNGT 6 cut(s) 61, 167, 301, 454, 844, 981
TaiI ACGT 6 cut(s) 202, 367, 494, 625, 835, 1352
TaqI TCGA 3 cut(s) 411, 468, 1067
TatI WGTACW 2 cut(s) 507, 1165
TfiI GAWTC 2 cut(s) 580, 1171
Tru1I TTAA 9 cut(s) 5, 36, 549, 597, 788, 906, 1110, 1209, 1278
Tru9I TTAA 9 cut(s) 5, 36, 549, 597, 788, 906, 1110, 1209, 1278
TscAI CASTG 4 cut(s) 181, 337, 1563, 1672
TseFI GTSAC 3 cut(s) 301, 772, 866
TseI GCWGC 3 cut(s) 656, 664, 1715
Tsp45I GTSAC 3 cut(s) 301, 772, 866
TspDTI ATGAA 5 cut(s) 246, 1166, 1227, 1539, 1562
TspRI CASTG 4 cut(s) 181, 337, 1563, 1672
Van91I CCANNNNNTGG 1 cut(s) 982
VpaK11BI GGWCC 3 cut(s) 554, 715, 1577
VspI ATTAAT 3 cut(s) 36, 597, 788
XagI CCTNNNNNAGG 2 cut(s) 929, 1640
XapI RAATTY 4 cut(s) 767, 805, 1216, 1483
XbaI TCTAGA 1 cut(s) 1753
XcmI CCANNNNNNNNNTGG 2 cut(s) 123, 983
XmiI GTMKAC 2 cut(s) 327, 527
XspI CTAG 7 cut(s) 351, 543, 890, 1077, 1574, 1581, 1754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.